Miyakogusa Predicted Gene

Lj4g3v1287320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1287320.1 NODE_52417_length_1520_cov_123.377632.path2.1
         (309 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-31865...   464   e-131
Medtr4g102440.1 | PGR5-like protein 1A | HC | chr4:42460563-4246...   437   e-123
Medtr2g097230.1 | PGR5-like protein 1A, putative | HC | chr2:415...    68   1e-11

>Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-3186523
           | 20130731
          Length = 315

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/292 (79%), Positives = 250/292 (85%), Gaps = 11/292 (3%)

Query: 29  RAHLVQFNGRRNVCXXXXXXXXXSPKASADQQ-GKVEKDAV-DSI---------KEKKSI 77
           R   + FN               SPKA++DQQ GKVE+DAV DS          KEKKS+
Sbjct: 24  RVLPIHFNAGGRHSSLRRGLFLLSPKATSDQQAGKVEEDAVVDSKILQYCSIDQKEKKSL 83

Query: 78  GELEQDFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEAAMGYVS 137
           GELEQDFLQALQAFYYEGKA MSNEEFDNLKEELMWEGSSVVMLSS EQKFLEA++ YVS
Sbjct: 84  GELEQDFLQALQAFYYEGKATMSNEEFDNLKEELMWEGSSVVMLSSSEQKFLEASIAYVS 143

Query: 138 GKPIMSDKEYDELKLRLKMEGSEIVAEGPRCSIRSRKVYSDLSIDYLKMFLLNVPATVVA 197
           GKP+MSDKE+DELKL+LKMEGSEIVAEGPRCS+RSRKVYSDL++DYLK  LL VPATV+A
Sbjct: 144 GKPLMSDKEFDELKLKLKMEGSEIVAEGPRCSLRSRKVYSDLTVDYLKALLLKVPATVIA 203

Query: 198 LGLFFFLDDVTGFEINSLIEIPEPYSFILTWFAAVPFIVWLAQSITNAIINDFLILKGPC 257
           LGLFFFLDDVTGFEIN LI IPEP+SFILTWFAAVPFI+W AQSITNAII DFLILKGPC
Sbjct: 204 LGLFFFLDDVTGFEINYLIAIPEPFSFILTWFAAVPFILWFAQSITNAIIKDFLILKGPC 263

Query: 258 PNCGTENTSFFGTILSISSGNSTNKVKCVNCGTAMVYDSSTRLITLPEGSNA 309
           PNCGTENTSFFGTILSISSG+STNKVKC NCGTAM+YDS+TRLITLPEGSNA
Sbjct: 264 PNCGTENTSFFGTILSISSGDSTNKVKCENCGTAMLYDSTTRLITLPEGSNA 315


>Medtr4g102440.1 | PGR5-like protein 1A | HC |
           chr4:42460563-42464677 | 20130731
          Length = 319

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/323 (70%), Positives = 252/323 (78%), Gaps = 26/323 (8%)

Query: 2   ASKLASTLTYQRPFTATTQPT-----SSISTPRAHLVQFNGRRNVCXXXXXXXXXSPKAS 56
           A+K+A TL   RP +A   P      SS+S P  HL                   SPKA+
Sbjct: 4   ATKVAFTLAPPRPCSAPPTPFIPFSFSSVSPP--HL-----NSRHLCLRRRLFLLSPKAT 56

Query: 57  ADQQGKV---EKDAV-----------DSIKEKKSIGELEQDFLQALQAFYYEGKAIMSNE 102
           ADQQG V   + DAV           D  KEKKS+GELEQ+FLQALQ+FYYEGKAIMSNE
Sbjct: 57  ADQQGNVGDFDGDAVIDTNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNE 116

Query: 103 EFDNLKEELMWEGSSVVMLSSDEQKFLEAAMGYVSGKPIMSDKEYDELKLRLKMEGSEIV 162
           EFDNLKEELMWEGSSVVMLSSDEQKFLEA+M YVSG PI++DKEYD+LKL LK EGSEIV
Sbjct: 117 EFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILTDKEYDKLKLNLKREGSEIV 176

Query: 163 AEGPRCSIRSRKVYSDLSIDYLKMFLLNVPATVVALGLFFFLDDVTGFEINSLIEIPEPY 222
            EGPRCS+RS+KVYSDLS+DYL+MFLLNVPATVVALGLFFFLDD+TGFEI  L+E+PEP+
Sbjct: 177 VEGPRCSLRSKKVYSDLSVDYLRMFLLNVPATVVALGLFFFLDDLTGFEITYLLELPEPF 236

Query: 223 SFILTWFAAVPFIVWLAQSITNAIINDFLILKGPCPNCGTENTSFFGTILSISSGNSTNK 282
           SFI TWFAAVP IV+LA S+T AII DF+ILKGPCPNCGTENTSFFGTILSISSG S NK
Sbjct: 237 SFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSGGSNNK 296

Query: 283 VKCVNCGTAMVYDSSTRLITLPE 305
           VKC +CGT MVYDS TRLITLPE
Sbjct: 297 VKCSDCGTEMVYDSGTRLITLPE 319


>Medtr2g097230.1 | PGR5-like protein 1A, putative | HC |
           chr2:41516368-41519630 | 20130731
          Length = 286

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 24/185 (12%)

Query: 125 EQKFLEAAMGYVSGKPIMSDKEYDELKLRLKMEGSEIVAEGPRCSIRSRKVYSDLSIDYL 184
           E  + +A   Y  G+P++ D  +D ++L+LK  GS+ V + PRCSIR +  Y+D   D  
Sbjct: 67  EALYSQARDAYYRGEPLIVDDMFDRVELKLKWYGSKSVVKYPRCSIRRQSTYADAEEDLS 126

Query: 185 KMFLLNVPATV-------VALGLFFFLDDVT-------GFEINSLIEIPEPYSFILT-WF 229
            +F L    T+         +G  F+   +        G    S      P   + T  F
Sbjct: 127 MVFALASAWTLFFAFGSSAMVGPMFYSISLAYQNAFNLGLSYGSQASELSPLFMVNTILF 186

Query: 230 AAVPFIVWL------AQSITNAIINDFLILKGPCPNCGTENTSFFGTILSISSGNSTNKV 283
            A+ F++         +++     ND   LKG CPNCG E    F  + +  + NS ++ 
Sbjct: 187 TALGFVIGYPVASASVKTLQGLWRNDLAALKGSCPNCGEE---VFAFVRTDKANNSPHRA 243

Query: 284 KCVNC 288
           KC  C
Sbjct: 244 KCHVC 248