Miyakogusa Predicted Gene

Lj4g3v1236970.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1236970.2 Non Characterized Hit- tr|C6T9Y0|C6T9Y0_SOYBN
Uncharacterized protein OS=Glycine max PE=2
SV=1,87.65,0,FFH4HYDRLASE,Formyltetrahydrofolate deformylase;
FORMYLTETRAHYDROFOLATE DEFORMYLASE,Formyltetrahydro,CUFF.48703.2
         (325 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g016670.1 | formyltetrahydrofolate deformylase | HC | chr7...   569   e-162
Medtr5g012850.1 | formyltetrahydrofolate deformylase | HC | chr5...   472   e-133
Medtr5g012850.3 | formyltetrahydrofolate deformylase | HC | chr5...   395   e-110
Medtr5g012850.2 | formyltetrahydrofolate deformylase | HC | chr5...   344   6e-95
Medtr5g012850.4 | formyltetrahydrofolate deformylase | HC | chr5...   344   6e-95
Medtr5g012850.5 | formyltetrahydrofolate deformylase | HC | chr5...   298   7e-81
Medtr1g007170.1 | phosphoribosylglycinamide formyltransferase | ...    67   3e-11
Medtr6g003980.1 | methionyl-tRNA formyltransferase | HC | chr6:4...    54   3e-07

>Medtr7g016670.1 | formyltetrahydrofolate deformylase | HC |
           chr7:5277165-5272412 | 20130731
          Length = 324

 Score =  569 bits (1466), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 275/325 (84%), Positives = 293/325 (90%), Gaps = 1/325 (0%)

Query: 1   MAMAMARRVSKVLGLPITNNNRNICFKXXXXXXXXXXXXAHGIHVFHCPDAVGIVAKLSD 60
           M M + RRVS+VLGL  +N  RN  FK            +HGIHVFHCPDAVGIVAKLS+
Sbjct: 1   MGMVV-RRVSQVLGLTNSNKIRNFSFKSLDLPPLPSPSLSHGIHVFHCPDAVGIVAKLSE 59

Query: 61  CIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRVQMEEDFLKLSQAFSAMKSVVR 120
           CIASRGGNIL AD+FVP+NK VFYSRSDFVFDPVKW R QMEEDFLKLSQAF+A +SVVR
Sbjct: 60  CIASRGGNILAADVFVPQNKHVFYSRSDFVFDPVKWPRKQMEEDFLKLSQAFNATRSVVR 119

Query: 121 VPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHHRGSNTHVIRFLERHG 180
           VP+LDPKYKIAVLASKQDHCLVDLLHGWQDG+LPVDITCVISNHHR SNTHVIRFLERHG
Sbjct: 120 VPALDPKYKIAVLASKQDHCLVDLLHGWQDGKLPVDITCVISNHHRDSNTHVIRFLERHG 179

Query: 181 IPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSGNFITSYGNDIINIHHGLLPSF 240
           IPYH LSTT+ENKREGEILEL+QNTDFLVLARYMQ+LSGNFI SYGNDIINIHHGLLPSF
Sbjct: 180 IPYHCLSTTNENKREGEILELVQNTDFLVLARYMQILSGNFIRSYGNDIINIHHGLLPSF 239

Query: 241 KGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQ 300
           KGGHPSKQAFEAGVKLIGATSHFV+EELD+GPIIEQMVERVSHRD+LQSFVQKSENLEKQ
Sbjct: 240 KGGHPSKQAFEAGVKLIGATSHFVSEELDSGPIIEQMVERVSHRDDLQSFVQKSENLEKQ 299

Query: 301 CLYKAIRSYCELRVLPYEDMRTVVF 325
           CL KAIRSYCELRVLPYE  +TVVF
Sbjct: 300 CLSKAIRSYCELRVLPYEIKKTVVF 324


>Medtr5g012850.1 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948354 | 20130731
          Length = 349

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 214/286 (74%), Positives = 253/286 (88%)

Query: 40  AHGIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRV 99
            HGIHVF CPD++GIVAKLSDCIAS GGNI+ AD+FVP+NK +FYSR+DFVFD VKW R+
Sbjct: 64  THGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRL 123

Query: 100 QMEEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITC 159
           +MEEDFLK+S+ ++A++S+++VP+LDPKYKIAVLAS QDHCL+D LHGWQDGRLPVDITC
Sbjct: 124 RMEEDFLKISKTYNAVRSILKVPALDPKYKIAVLASNQDHCLIDSLHGWQDGRLPVDITC 183

Query: 160 VISNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSG 219
           VISNH RG  + VIRFL+RH IPYHYL TT ENKRE +IL+L+Q+TDFLVLARY +++S 
Sbjct: 184 VISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREDDILKLVQDTDFLVLARYTKIISS 243

Query: 220 NFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVE 279
            F+ SYG DIINIHH LLPSF+G +P KQAF+AGVK+IGATSHFVTE  DAGPIIEQMVE
Sbjct: 244 TFLRSYGKDIINIHHCLLPSFRGANPFKQAFDAGVKIIGATSHFVTEGRDAGPIIEQMVE 303

Query: 280 RVSHRDNLQSFVQKSENLEKQCLYKAIRSYCELRVLPYEDMRTVVF 325
           RVSH+D+LQ FVQKSEN+EKQCL  AIRSYCELRVLPY++  TVVF
Sbjct: 304 RVSHKDDLQRFVQKSENIEKQCLSMAIRSYCELRVLPYKEKNTVVF 349


>Medtr5g012850.3 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948354 | 20130731
          Length = 312

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 177/242 (73%), Positives = 212/242 (87%)

Query: 40  AHGIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRV 99
            HGIHVF CPD++GIVAKLSDCIAS GGNI+ AD+FVP+NK +FYSR+DFVFD VKW R+
Sbjct: 64  THGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRL 123

Query: 100 QMEEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITC 159
           +MEEDFLK+S+ ++A++S+++VP+LDPKYKIAVLAS QDHCL+D LHGWQDGRLPVDITC
Sbjct: 124 RMEEDFLKISKTYNAVRSILKVPALDPKYKIAVLASNQDHCLIDSLHGWQDGRLPVDITC 183

Query: 160 VISNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSG 219
           VISNH RG  + VIRFL+RH IPYHYL TT ENKRE +IL+L+Q+TDFLVLARY +++S 
Sbjct: 184 VISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREDDILKLVQDTDFLVLARYTKIISS 243

Query: 220 NFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVE 279
            F+ SYG DIINIHH LLPSF+G +P KQAF+AGVK+IGATSHFVTE  DAGPIIEQMV 
Sbjct: 244 TFLRSYGKDIINIHHCLLPSFRGANPFKQAFDAGVKIIGATSHFVTEGRDAGPIIEQMVN 303

Query: 280 RV 281
           + 
Sbjct: 304 KT 305


>Medtr5g012850.2 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948354 | 20130731
          Length = 286

 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 153/216 (70%), Positives = 186/216 (86%)

Query: 40  AHGIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRV 99
            HGIHVF CPD++GIVAKLSDCIAS GGNI+ AD+FVP+NK +FYSR+DFVFD VKW R+
Sbjct: 64  THGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRL 123

Query: 100 QMEEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITC 159
           +MEEDFLK+S+ ++A++S+++VP+LDPKYKIAVLAS QDHCL+D LHGWQDGRLPVDITC
Sbjct: 124 RMEEDFLKISKTYNAVRSILKVPALDPKYKIAVLASNQDHCLIDSLHGWQDGRLPVDITC 183

Query: 160 VISNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSG 219
           VISNH RG  + VIRFL+RH IPYHYL TT ENKRE +IL+L+Q+TDFLVLARY +++S 
Sbjct: 184 VISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREDDILKLVQDTDFLVLARYTKIISS 243

Query: 220 NFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVK 255
            F+ SYG DIINIHH LLPSF+G +P KQ    GV+
Sbjct: 244 TFLRSYGKDIINIHHCLLPSFRGANPFKQVIFLGVR 279


>Medtr5g012850.4 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948193 | 20130731
          Length = 286

 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 153/216 (70%), Positives = 186/216 (86%)

Query: 40  AHGIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRV 99
            HGIHVF CPD++GIVAKLSDCIAS GGNI+ AD+FVP+NK +FYSR+DFVFD VKW R+
Sbjct: 64  THGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRL 123

Query: 100 QMEEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITC 159
           +MEEDFLK+S+ ++A++S+++VP+LDPKYKIAVLAS QDHCL+D LHGWQDGRLPVDITC
Sbjct: 124 RMEEDFLKISKTYNAVRSILKVPALDPKYKIAVLASNQDHCLIDSLHGWQDGRLPVDITC 183

Query: 160 VISNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSG 219
           VISNH RG  + VIRFL+RH IPYHYL TT ENKRE +IL+L+Q+TDFLVLARY +++S 
Sbjct: 184 VISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREDDILKLVQDTDFLVLARYTKIISS 243

Query: 220 NFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVK 255
            F+ SYG DIINIHH LLPSF+G +P KQ    GV+
Sbjct: 244 TFLRSYGKDIINIHHCLLPSFRGANPFKQVIFLGVR 279


>Medtr5g012850.5 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3947457 | 20130731
          Length = 244

 Score =  298 bits (762), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 131/177 (74%), Positives = 158/177 (89%)

Query: 40  AHGIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRV 99
            HGIHVF CPD++GIVAKLSDCIAS GGNI+ AD+FVP+NK +FYSR+DFVFD VKW R+
Sbjct: 64  THGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRL 123

Query: 100 QMEEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITC 159
           +MEEDFLK+S+ ++A++S+++VP+LDPKYKIAVLAS QDHCL+D LHGWQDGRLPVDITC
Sbjct: 124 RMEEDFLKISKTYNAVRSILKVPALDPKYKIAVLASNQDHCLIDSLHGWQDGRLPVDITC 183

Query: 160 VISNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQV 216
           VISNH RG  + VIRFL+RH IPYHYL TT ENKRE +IL+L+Q+TDFLVLARY +V
Sbjct: 184 VISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREDDILKLVQDTDFLVLARYTKV 240


>Medtr1g007170.1 | phosphoribosylglycinamide formyltransferase | HC
           | chr1:215277-219688 | 20130731
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 13/203 (6%)

Query: 127 KYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHHRGSNTHVIRFLERHGIPYHYL 186
           + K+AV  S        +    + G L  D+  +++N    S+     +  ++GIP    
Sbjct: 91  RKKLAVFVSGGGSNFKSIHEASKRGSLRGDVVVLVTNK---SDCGGAEYARQNGIPVIVF 147

Query: 187 STTSENKREGEILELIQN-----TDFLVLARYMQVLSGNFITSYGNDIINIHHGLLPSFK 241
               +        +L+        DF++LA Y++++    I +Y   I NIH  LLP+F 
Sbjct: 148 PKAKDGYDGLSANDLVDTLRRFEVDFVLLAGYLKLIPAELIRAYQRSIFNIHPSLLPAFG 207

Query: 242 GG-----HPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSEN 296
           G         K    +G +  G T HFV E  D G I+ Q V  V   D  +    +   
Sbjct: 208 GKGFYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVLTNDTPEELAARVLR 267

Query: 297 LEKQCLYKAIRSYCELRVLPYED 319
            E Q   + + + CE R++  +D
Sbjct: 268 EEHQLYVEVVEALCEDRIVWRKD 290


>Medtr6g003980.1 | methionyl-tRNA formyltransferase | HC |
           chr6:44441-50370 | 20130731
          Length = 354

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 209 VLARYMQVLSGNFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEEL 268
           + A Y  +L   F+    +  +NIH  LLP ++G  P ++A + GVK  G +  F    L
Sbjct: 116 ITAAYGNILPTKFLDIPPSGTVNIHPSLLPIYRGAAPVQRALQDGVKETGVSLAFTVRAL 175

Query: 269 DAGPIIE----QMVERVSHRDNLQSFVQKSENLEKQCLYKAIRSYCELRVLPYEDMRTVV 324
           DAGP+I     Q+ + +   D L+    K   L  + L             P +D +  +
Sbjct: 176 DAGPVIATETIQVDDHIKAPDLLELLFHKGSKLLIRELPSIFDGSARANAQPQDDSKATL 235