Miyakogusa Predicted Gene

Lj4g3v1223820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223820.1 Non Characterized Hit- tr|G7JHR5|G7JHR5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,74.01,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.48686.1
         (774 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100700.1 | transmembrane protein, putative | HC | chr4:41...  1026   0.0  
Medtr4g100700.2 | transmembrane protein, putative | HC | chr4:41...   726   0.0  

>Medtr4g100700.1 | transmembrane protein, putative | HC |
           chr4:41537447-41541968 | 20130731
          Length = 776

 Score = 1026 bits (2653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/785 (67%), Positives = 576/785 (73%), Gaps = 20/785 (2%)

Query: 1   MLPHSYTLDSATKSTELLTSIQSATTPSQITTVCASIESFLHSHSPDQSRHFFSLAFPTL 60
           MLPHSYTLDS TKS EL+++IQSAT+PSQITT+C SIE+FLH+HSPDQSRHFFSLAFP L
Sbjct: 1   MLPHSYTLDSVTKSQELVSTIQSATSPSQITTLCTSIETFLHTHSPDQSRHFFSLAFPAL 60

Query: 61  ICKLFGFHLDAAPNHPQSSPTSWIETAELSKTLFSLLSPAGTLAAAISAVDRLSLVKYLF 120
           IC LFGF     P     S   WI   EL K LFSLLSP GTLA AI+AVDRLSLVKYLF
Sbjct: 61  ICNLFGFE---NPRAASPSSNGWINIPELHKPLFSLLSPTGTLATAITAVDRLSLVKYLF 117

Query: 121 PAERLPHWARXXXXXXXXXXXXXXXXXXXXXXXXXYHIQLNVFQYFFFWFAYYPVCKGNS 180
           P+ERLPHW+R                           IQLNVFQYFFFWFAYYPV KGNS
Sbjct: 118 PSERLPHWSRSLSDKHNLSDLLPSVFPSSSSSS---QIQLNVFQYFFFWFAYYPVSKGNS 174

Query: 181 EN-SNHASSAKKATTLV--RLENWASSIPGFSASERGNAVDPKANCSXXXXXXXXXXXXX 237
            N +N   S+ K TT    RLENW SSIP  SA++   + D + N               
Sbjct: 175 VNPTNSDQSSVKITTAAKSRLENWTSSIPFVSATKPPVSND-RPNYDFYTLLLYAYLRAN 233

Query: 238 VPTSDLTSHQPYRSSILHYGSGHDAAAVSRAEFVVNALIHFWLVDNDFSPFPVKVCSLHG 297
           VPT DL SHQPYRSSILHYGSGHDA   +RAEFVVN LIHFWLVDNDFSPFPV VC   G
Sbjct: 234 VPTCDLASHQPYRSSILHYGSGHDANFAARAEFVVNTLIHFWLVDNDFSPFPVSVCKTMG 293

Query: 298 VKFQFXXXXXXXXXXXXXVVKLFVRYLSLXXXXXXXXXXXXXXXXXXXXXXXXXEVVKSK 357
           V F F             VVKLFVRYL L                         EV K+K
Sbjct: 294 VSFPFGEIPPAAGLGE--VVKLFVRYLGLSTLAASCENGDFGYSYNSSPRWRSLEVSKNK 351

Query: 358 DLGYVCWNPCLQRPLYRFLLRTFLFCPVAASLKNVSQVFSVWVSYLEPWTIKGDEFSELD 417
           DLGY CWN CLQRPLYRFLLRT LFCP+AAS+KNVSQVF VW+SYLEPW+IKGDEFSELD
Sbjct: 352 DLGYGCWNQCLQRPLYRFLLRTLLFCPMAASVKNVSQVFYVWISYLEPWSIKGDEFSELD 411

Query: 418 AMNDEKSENSVLATANAGGGGYTPRWQDYVLSNYLYYTSLVMHFIGFAHRFLHNDVEAVV 477
           AMN EK EN+V    + GGG Y+PRW DYVLSNYLYYTSLVMHFIGFAHRFLH+DVE VV
Sbjct: 412 AMNGEKMENAVSEIGSGGGGAYSPRWVDYVLSNYLYYTSLVMHFIGFAHRFLHSDVETVV 471

Query: 478 QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGKSMLNNLYRYVPIIREQLQDWEDGL 537
           QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGK MLNNLYR+VPIIREQLQDWEDGL
Sbjct: 472 QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGKPMLNNLYRFVPIIREQLQDWEDGL 531

Query: 538 CETDADGSFLHENWNKDLRXXXXXXXXXXXXXXXXILRAEAELHAISGDNLTPGLQCIDS 597
           CETD DGSFLH+NWNKDLR                ILRAEAEL A SGDN+TP LQCIDS
Sbjct: 532 CETDVDGSFLHDNWNKDLRLFADGEDGGQQLLQLFILRAEAELQAASGDNVTPSLQCIDS 591

Query: 598 LKARLGSLFDGQTIKPSSTCQEPIQHPQSRDDIFKPRRFGNHAFADVKYKGDWMRRPISS 657
           LK++LG LFDGQTIKPSST  EP+QH QSRD+IF PRR GN    DVKYKGDWM+RPISS
Sbjct: 592 LKSKLGCLFDGQTIKPSSTSPEPMQHQQSRDEIFNPRRVGNCVRVDVKYKGDWMKRPISS 651

Query: 658 DEIAWLAKVLVRLSDWLNETLGLNQAEN--------SNSQVGSASFVEVSTDVAHVCGPS 709
           DEIAWLAKVLV LSDWLNE LGLNQ E+        ++    + S+VEVSTDVA +CGPS
Sbjct: 652 DEIAWLAKVLVWLSDWLNENLGLNQTEHTLGLNQTETSKSSSTCSYVEVSTDVADICGPS 711

Query: 710 EALKVFLCTIGSWFLFLGAASMGFMRQYGLRVNLRILASKKVVMVFVLYAIFSILKRSIR 769
           E LK FLCTI SWFLFLGAA +GFMR+YGLRVNLRILASKKVV+ FVLYA+F +L++ +R
Sbjct: 712 ETLKAFLCTICSWFLFLGAAFVGFMRKYGLRVNLRILASKKVVLFFVLYAVFLLLRKFVR 771

Query: 770 ALLSM 774
           ++LSM
Sbjct: 772 SILSM 776


>Medtr4g100700.2 | transmembrane protein, putative | HC |
           chr4:41537447-41541968 | 20130731
          Length = 568

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/559 (67%), Positives = 403/559 (72%), Gaps = 12/559 (2%)

Query: 1   MLPHSYTLDSATKSTELLTSIQSATTPSQITTVCASIESFLHSHSPDQSRHFFSLAFPTL 60
           MLPHSYTLDS TKS EL+++IQSAT+PSQITT+C SIE+FLH+HSPDQSRHFFSLAFP L
Sbjct: 1   MLPHSYTLDSVTKSQELVSTIQSATSPSQITTLCTSIETFLHTHSPDQSRHFFSLAFPAL 60

Query: 61  ICKLFGFHLDAAPNHPQSSPTSWIETAELSKTLFSLLSPAGTLAAAISAVDRLSLVKYLF 120
           IC LFGF     P     S   WI   EL K LFSLLSP GTLA AI+AVDRLSLVKYLF
Sbjct: 61  ICNLFGFE---NPRAASPSSNGWINIPELHKPLFSLLSPTGTLATAITAVDRLSLVKYLF 117

Query: 121 PAERLPHWARXXXXXXXXXXXXXXXXXXXXXXXXXYHIQLNVFQYFFFWFAYYPVCKGNS 180
           P+ERLPHW+R                           IQLNVFQYFFFWFAYYPV KGNS
Sbjct: 118 PSERLPHWSRSLSDKHNLSDLLPSVFPSSSSSS---QIQLNVFQYFFFWFAYYPVSKGNS 174

Query: 181 EN-SNHASSAKKATTLV--RLENWASSIPGFSASERGNAVDPKANCSXXXXXXXXXXXXX 237
            N +N   S+ K TT    RLENW SSIP  SA++   + D + N               
Sbjct: 175 VNPTNSDQSSVKITTAAKSRLENWTSSIPFVSATKPPVSND-RPNYDFYTLLLYAYLRAN 233

Query: 238 VPTSDLTSHQPYRSSILHYGSGHDAAAVSRAEFVVNALIHFWLVDNDFSPFPVKVCSLHG 297
           VPT DL SHQPYRSSILHYGSGHDA   +RAEFVVN LIHFWLVDNDFSPFPV VC   G
Sbjct: 234 VPTCDLASHQPYRSSILHYGSGHDANFAARAEFVVNTLIHFWLVDNDFSPFPVSVCKTMG 293

Query: 298 VKFQFXXXXXXXXXXXXXVVKLFVRYLSLXXXXXXXXXXXXXXXXXXXXXXXXXEVVKSK 357
           V F F             VVKLFVRYL L                         EV K+K
Sbjct: 294 VSFPFGEIPPAAGLGE--VVKLFVRYLGLSTLAASCENGDFGYSYNSSPRWRSLEVSKNK 351

Query: 358 DLGYVCWNPCLQRPLYRFLLRTFLFCPVAASLKNVSQVFSVWVSYLEPWTIKGDEFSELD 417
           DLGY CWN CLQRPLYRFLLRT LFCP+AAS+KNVSQVF VW+SYLEPW+IKGDEFSELD
Sbjct: 352 DLGYGCWNQCLQRPLYRFLLRTLLFCPMAASVKNVSQVFYVWISYLEPWSIKGDEFSELD 411

Query: 418 AMNDEKSENSVLATANAGGGGYTPRWQDYVLSNYLYYTSLVMHFIGFAHRFLHNDVEAVV 477
           AMN EK EN+V    + GGG Y+PRW DYVLSNYLYYTSLVMHFIGFAHRFLH+DVE VV
Sbjct: 412 AMNGEKMENAVSEIGSGGGGAYSPRWVDYVLSNYLYYTSLVMHFIGFAHRFLHSDVETVV 471

Query: 478 QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGKSMLNNLYRYVPIIREQLQDWEDGL 537
           QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGK MLNNLYR+VPIIREQLQDWEDGL
Sbjct: 472 QMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSGKPMLNNLYRFVPIIREQLQDWEDGL 531

Query: 538 CETDADGSFLHENWNKDLR 556
           CETD DGSFLH+NWNKDLR
Sbjct: 532 CETDVDGSFLHDNWNKDLR 550