Miyakogusa Predicted Gene

Lj4g3v1223640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223640.1 tr|G7JHR0|G7JHR0_MEDTR Acyl-coenzyme A oxidase
OS=Medicago truncatula GN=MTR_4g100640 PE=3 SV=1,91.26,0,Acyl-CoA
dehydrogenase NM domain-like,Acyl-CoA dehydrogenase/oxidase; Acyl-CoA
dehydrogenase C-termi,gene.g54282.t1.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like prote...   756   0.0  
Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   754   0.0  
Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   731   0.0  
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035...   198   8e-51
Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622...   183   3e-46
Medtr7g068850.1 | acyl-CoA dehydrogenase | HC | chr7:25296388-25...    55   8e-08

>Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 534

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/389 (91%), Positives = 374/389 (96%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           MEG DHLA ERNKA+FDVDAMKIVWAGS  ALEVSDRM+RLVASDP F+KD RPML RK+
Sbjct: 1   MEGEDHLAFERNKAEFDVDAMKIVWAGSAHALEVSDRMSRLVASDPAFRKDHRPMLGRKE 60

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF++TL+KAAYAWKRIIELRL+EEEASMLRSFVD+PAFTDLHWGMFIPAIKGQGTEEQQQ
Sbjct: 61  LFKSTLKKAAYAWKRIIELRLTEEEASMLRSFVDEPAFTDLHWGMFIPAIKGQGTEEQQQ 120

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWLPLAQ+MQ+IGCYAQTELGHGSNVQGLETTATFDPKTDEF IHSPTLTSSKWWPGGLG
Sbjct: 121 KWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLG 180

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHAVVYARLI DG+DHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYN+MDNG
Sbjct: 181 KVSTHAVVYARLITDGRDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNTMDNG 240

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
           VLRF+HVRIPR+QMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIV+DAS+AMSRAV
Sbjct: 241 VLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVSDASTAMSRAV 300

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIA RYSAVRRQFG N G LE+QVIDYKTQQARLFPLLASAYAFRFVGEWLKWLY DVMK
Sbjct: 301 CIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYTDVMK 360

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RLQANDFSTLPEAHACTAGLKSLTTSAT+
Sbjct: 361 RLQANDFSTLPEAHACTAGLKSLTTSATS 389


>Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 664

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/389 (91%), Positives = 374/389 (96%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           MEG DHLA ERNKA+FDVDAMKIVWAGS  ALEVSDRM+RLVASDP F+KD RPML RK+
Sbjct: 1   MEGEDHLAFERNKAEFDVDAMKIVWAGSAHALEVSDRMSRLVASDPAFRKDHRPMLGRKE 60

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF++TL+KAAYAWKRIIELRL+EEEASMLRSFVD+PAFTDLHWGMFIPAIKGQGTEEQQQ
Sbjct: 61  LFKSTLKKAAYAWKRIIELRLTEEEASMLRSFVDEPAFTDLHWGMFIPAIKGQGTEEQQQ 120

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWLPLAQ+MQ+IGCYAQTELGHGSNVQGLETTATFDPKTDEF IHSPTLTSSKWWPGGLG
Sbjct: 121 KWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLG 180

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHAVVYARLI DG+DHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYN+MDNG
Sbjct: 181 KVSTHAVVYARLITDGRDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNTMDNG 240

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
           VLRF+HVRIPR+QMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIV+DAS+AMSRAV
Sbjct: 241 VLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVSDASTAMSRAV 300

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIA RYSAVRRQFG N G LE+QVIDYKTQQARLFPLLASAYAFRFVGEWLKWLY DVMK
Sbjct: 301 CIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYTDVMK 360

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RLQANDFSTLPEAHACTAGLKSLTTSAT+
Sbjct: 361 RLQANDFSTLPEAHACTAGLKSLTTSATS 389


>Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr5:4011592-4004454 | 20130731
          Length = 664

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/389 (87%), Positives = 367/389 (94%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           MEGVDHLA ERNKA+FDV+ MKIVWAGS++  E+SDR++RLVASDP F+KD+R  L RK+
Sbjct: 1   MEGVDHLAFERNKAEFDVNEMKIVWAGSRQEFELSDRISRLVASDPAFRKDNRTSLDRKE 60

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF+NTLRK AYAWKRIIELRL+E+EAS LRSFVD+PAFTDLHWGMF+PAIKGQGT+EQQ+
Sbjct: 61  LFKNTLRKTAYAWKRIIELRLNEQEASKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQE 120

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWLPLA KMQ+IGCYAQTELGHGSNVQGLETTATFDPKTDEF IHSPTLTSSKWWPGGLG
Sbjct: 121 KWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFIIHSPTLTSSKWWPGGLG 180

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHA+VYARLI +GQD GVHGFIVQLRSLDDHLPLPGITVGDIGMKFGN AYN+MDNG
Sbjct: 181 KISTHAIVYARLITEGQDQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNAAYNTMDNG 240

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
           VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQL+YGTMVYVRQ IVADAS+A+SRAV
Sbjct: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLIYGTMVYVRQAIVADASTALSRAV 300

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIATRYSAVRRQFGS KGG ETQVIDYKTQQARLFPLLASAYAFRFV EWLKWLY DV +
Sbjct: 301 CIATRYSAVRRQFGSQKGGPETQVIDYKTQQARLFPLLASAYAFRFVSEWLKWLYTDVTQ 360

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RLQANDFSTLPEAHACTAGLKSLTTSATA
Sbjct: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389


>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
           chr8:38035172-38040185 | 20130731
          Length = 689

 Score =  198 bits (503), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/288 (40%), Positives = 160/288 (55%), Gaps = 17/288 (5%)

Query: 114 GTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSK 173
           GT++ + K+      +   GC+A TEL HGSNVQGL+T ATFDP TDEF I +P   + K
Sbjct: 158 GTQKHKDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTLATFDPITDEFIIDTPNDGAIK 217

Query: 174 WWPGGLGKASTHAVVYARLILDG------QDHGVHGFIVQLRSLDDHLPLPGITVGDIGM 227
           WW G        A V+ARL L         D GVH FIV +R +  H  LPGI + D G 
Sbjct: 218 WWIGNAAVHGKFATVFARLKLPNYDAKGVSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGH 277

Query: 228 KFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS--NVPRQL--VYGTMVY 283
           K G    N +DNG LRF  VRIPR+ +L R   V+R+GKY  +  +V ++     G +V 
Sbjct: 278 KVG---LNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSTLPSVNKRFGATLGELVG 334

Query: 284 VRQTIVADASSAMSRAVCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYA 343
            R  +   + S +  +  IA RYS +R+QFG  +   E  ++DY++ Q +L P+LAS YA
Sbjct: 335 GRVGLAYSSVSVLKVSATIAIRYSLLRQQFGP-RDQPEVTILDYQSHQHKLMPMLASTYA 393

Query: 344 FRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTTSATAMS 391
           F F    L   Y  + K   ++D   + + HA +AGLK+  TS TA S
Sbjct: 394 FHFATTNLVEKYAQMKK---SHDEELVADVHALSAGLKAYVTSYTAKS 438


>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
           chr4:30622603-30615873 | 20130731
          Length = 678

 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 146/259 (56%), Gaps = 11/259 (4%)

Query: 103 WGMFIPAIKGQGTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEF 162
           WG    A+K  GT+    KWL   +   + GC+A +ELGHGSNV+G+ET  T+DP + EF
Sbjct: 158 WG---GAVKFLGTKRHHDKWLRATENYDIKGCFAMSELGHGSNVRGIETVTTYDPISGEF 214

Query: 163 EIHSPTLTSSKWWPGGLGKASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITV 222
            I++P  ++ K+W GG    +TH +V+++L ++G + GVH FI Q+R  D ++  P I +
Sbjct: 215 VINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIRDSDGNI-CPNIRI 273

Query: 223 GDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS--NVPRQLV--Y 278
            + G K G    N +DNG + FD+VRIPR  +L  ++ V+  G+Y+ +  N  ++     
Sbjct: 274 AECGHKIG---LNGVDNGRIWFDNVRIPRENLLNSMADVSPSGEYLSAIKNTDQRFAAFL 330

Query: 279 GTMVYVRQTIVADASSAMSRAVCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLL 338
             +   R TI   +      ++ IA RY+  RR F     G E  ++DY + Q RL PLL
Sbjct: 331 APLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSITPNGPEVLLLDYPSHQQRLLPLL 390

Query: 339 ASAYAFRFVGEWLKWLYMD 357
           A  YA  F    LK LY++
Sbjct: 391 AKIYAMSFSAIELKKLYVN 409


>Medtr7g068850.1 | acyl-CoA dehydrogenase | HC |
           chr7:25296388-25301382 | 20130731
          Length = 433

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 49/262 (18%)

Query: 98  FTDLHWGMFIPAIKGQGTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDP 157
           F  +H  + +  I   G+E Q+QK+LP   +++ I C+A TE  +GS+   L+TTAT   
Sbjct: 131 FILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASALKTTAT--- 187

Query: 158 KTDEFEIHSPTLTSSKWWPGGLGKASTHA---VVYARLILDGQDHGVHGFIVQLRSLDDH 214
           K +   I    L   K W G     ST A   V++AR   +   + ++G+IV+  +    
Sbjct: 188 KVEGGWI----LEGQKRWIGN----STFADLLVIFAR---NTSTNQINGYIVKKDA---- 232

Query: 215 LPLPGITVGDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPR 274
              PG+TV  I  K G      + NG +    V +P    +  V+      K        
Sbjct: 233 ---PGLTVTKIENKIG---LRIVQNGDIVMRKVFVPDEDRIEGVNSFQDTNK-------- 278

Query: 275 QLVYGTMVYVRQTIVADASSAMSRAVC-IATRYSAVRRQFGSNKGGLETQVIDYKTQQAR 333
                 ++ V + +VA     +S  +  +  RY   R+QFG+        +  ++  Q +
Sbjct: 279 ------VLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-------PLAAFQINQQK 325

Query: 334 LFPLLASAYAFRFVGEWLKWLY 355
           L  +L++  A   VG  L  LY
Sbjct: 326 LVQMLSNVQAMILVGWRLCKLY 347