Miyakogusa Predicted Gene

Lj4g3v1223620.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223620.2 tr|G7JHQ5|G7JHQ5_MEDTR Gibberellin
2-beta-dioxygenase OS=Medicago truncatula GN=MTR_4g100600 PE=3
SV,79.19,0,OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN,NULL;
no description,NULL; seg,NULL; Clavaminate,CUFF.49346.2
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100600.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   224   3e-59
Medtr4g100600.2 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   223   4e-59
Medtr4g100590.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   203   5e-53
Medtr4g100590.2 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   202   1e-52
Medtr8g102600.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   111   2e-25
Medtr8g102600.2 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   110   4e-25
Medtr4g100610.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   110   4e-25
Medtr6g088665.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   105   2e-23
Medtr6g088665.2 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   103   8e-23

>Medtr4g100600.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr4:41489565-41493292 | 20130731
          Length = 322

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 119/149 (79%), Gaps = 2/149 (1%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTAS--LNQWPSEELLPNWRP 58
           + L RKEYRGY+PLYAEKLDP+SLSKGDPKESYY+GPL DT S  LNQWPS ELLPNWRP
Sbjct: 67  IKLNRKEYRGYTPLYAEKLDPSSLSKGDPKESYYIGPLTDTTSVRLNQWPSNELLPNWRP 126

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           TMESL+WK L AGKE           DE+YFEKI A+ KP AFLRLL YPGE+G  EEIC
Sbjct: 127 TMESLFWKILSAGKELLSLIALSLNLDENYFEKISALNKPEAFLRLLRYPGELGPNEEIC 186

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
           GASAHSDYGMITLL+T+GVPGLQ+    L
Sbjct: 187 GASAHSDYGMITLLLTNGVPGLQICKEKL 215


>Medtr4g100600.2 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr4:41489659-41493224 | 20130731
          Length = 229

 Score =  223 bits (569), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 119/149 (79%), Gaps = 2/149 (1%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTAS--LNQWPSEELLPNWRP 58
           + L RKEYRGY+PLYAEKLDP+SLSKGDPKESYY+GPL DT S  LNQWPS ELLPNWRP
Sbjct: 67  IKLNRKEYRGYTPLYAEKLDPSSLSKGDPKESYYIGPLTDTTSVRLNQWPSNELLPNWRP 126

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           TMESL+WK L AGKE           DE+YFEKI A+ KP AFLRLL YPGE+G  EEIC
Sbjct: 127 TMESLFWKILSAGKELLSLIALSLNLDENYFEKISALNKPEAFLRLLRYPGELGPNEEIC 186

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
           GASAHSDYGMITLL+T+GVPGLQ+    L
Sbjct: 187 GASAHSDYGMITLLLTNGVPGLQICKEKL 215


>Medtr4g100590.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr4:41480458-41485220 | 20130731
          Length = 313

 Score =  203 bits (516), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 102/149 (68%), Positives = 114/149 (76%), Gaps = 7/149 (4%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTAS--LNQWPSEELLPNWRP 58
           + L RKEYRGY+PLYAEKLDP SLSKGDPKESYY+G L DT S  LNQWPS++LLPNW+P
Sbjct: 67  IKLNRKEYRGYTPLYAEKLDP-SLSKGDPKESYYIGSLEDTTSVRLNQWPSDKLLPNWKP 125

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           TMESL+WK L AGKE           DEDYF+KI A  KP AFLRLL YPGE+G     C
Sbjct: 126 TMESLFWKTLSAGKELLSLIALSLNLDEDYFQKISASNKPDAFLRLLRYPGELGC----C 181

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
           GASAHSDYGMITLL+T+GVPGLQ+    L
Sbjct: 182 GASAHSDYGMITLLITNGVPGLQICKEKL 210


>Medtr4g100590.2 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr4:41480624-41485153 | 20130731
          Length = 266

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/149 (68%), Positives = 114/149 (76%), Gaps = 7/149 (4%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTAS--LNQWPSEELLPNWRP 58
           + L RKEYRGY+PLYAEKLDP SLSKGDPKESYY+G L DT S  LNQWPS++LLPNW+P
Sbjct: 20  IKLNRKEYRGYTPLYAEKLDP-SLSKGDPKESYYIGSLEDTTSVRLNQWPSDKLLPNWKP 78

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           TMESL+WK L AGKE           DEDYF+KI A  KP AFLRLL YPGE+G     C
Sbjct: 79  TMESLFWKTLSAGKELLSLIALSLNLDEDYFQKISASNKPDAFLRLLRYPGELG----CC 134

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
           GASAHSDYGMITLL+T+GVPGLQ+    L
Sbjct: 135 GASAHSDYGMITLLITNGVPGLQICKEKL 163


>Medtr8g102600.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr8:43199509-43202370 | 20130731
          Length = 327

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 87/155 (56%), Gaps = 11/155 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTASL--------NQWPSEE 51
           M L R + ++GY+P+  E LDP +   GD KE YY+G + D  SL        NQWP+ +
Sbjct: 70  MKLLRNDSHKGYTPVLDEILDPQNQLHGDYKEGYYIG-VEDNDSLHHKPFYGPNQWPASD 128

Query: 52  LLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEM 111
           +LP WR TME    + L  GK            D ++F+K   +R+P A LRLLHY  ++
Sbjct: 129 VLPGWRETMEEYQRRALEVGKALARIIALALGLDANFFDKPETLREPIAILRLLHYQDKV 188

Query: 112 GS-GEEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
               + +  A AH+DYG+ITLL TD V GLQ+  N
Sbjct: 189 SDPSQGLYAAGAHTDYGLITLLATDDVQGLQICKN 223


>Medtr8g102600.2 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr8:43199509-43202370 | 20130731
          Length = 277

 Score =  110 bits (276), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 11/156 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTASL--------NQWPSEE 51
           M L R + ++GY+P+  E LDP +   GD KE YY+G + D  SL        NQWP+ +
Sbjct: 20  MKLLRNDSHKGYTPVLDEILDPQNQLHGDYKEGYYIG-VEDNDSLHHKPFYGPNQWPASD 78

Query: 52  LLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEM 111
           +LP WR TME    + L  GK            D ++F+K   +R+P A LRLLHY  ++
Sbjct: 79  VLPGWRETMEEYQRRALEVGKALARIIALALGLDANFFDKPETLREPIAILRLLHYQDKV 138

Query: 112 GS-GEEICGASAHSDYGMITLLVTDGVPGLQVLSNS 146
               + +  A AH+DYG+ITLL TD V GLQ+  N 
Sbjct: 139 SDPSQGLYAAGAHTDYGLITLLATDDVQGLQICKNK 174


>Medtr4g100610.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr4:41494368-41499948 | 20130731
          Length = 227

 Score =  110 bits (276), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 77/138 (55%), Gaps = 26/138 (18%)

Query: 30  KESYYVGPLADTAS--LNQWPSE-----------------ELLPNWRPTMESLYWK---E 67
           + + Y+GPL D  S  LNQWP +                 ELLPNW PTMES   +    
Sbjct: 81  RATRYIGPLTDKTSVRLNQWPCDGIHFLCPHFFFSCNDTLELLPNWIPTMESFILENTVR 140

Query: 68  LGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPG----EMGSGEEICGASAH 123
               +            DE++FEKIGA+  P  FLRLLHYPG    E+GS EE  GAS H
Sbjct: 141 FITLQINVLLIICLRSADENHFEKIGALSIPKVFLRLLHYPGLLISELGSREEKYGASPH 200

Query: 124 SDYGMITLLVTDGVPGLQ 141
           +DYGMITLL+T+GVPGLQ
Sbjct: 201 TDYGMITLLLTNGVPGLQ 218


>Medtr6g088665.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr6:33782197-33777376 | 20130731
          Length = 340

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 11/156 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTASL---------NQWPSE 50
           M + R E +RGY+P+  E LDP +   GD KE YY+G   D             N+WP+ 
Sbjct: 79  MKILRNEKHRGYTPVLDELLDPENQLHGDYKEGYYIGVEVDEDDPESNKPFYGPNKWPAP 138

Query: 51  ELLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGE 110
           ++LP WR TME  + + L  GK            D D+F+K   + +  A LRLLHY G+
Sbjct: 139 DILPGWRETMEKFHREALEVGKAVGKIIALALDLDADFFDKPEMLGESIATLRLLHYGGQ 198

Query: 111 MGSG-EEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
           +    + + GA AH+DYG+ITLL TD V GLQ+  +
Sbjct: 199 VSDPLKGLFGAGAHTDYGLITLLATDHVSGLQICKD 234


>Medtr6g088665.2 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr6:33782094-33777671 | 20130731
          Length = 341

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 85/157 (54%), Gaps = 12/157 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDP-TSLSKGDPKESYYVGPLADTASL---------NQWPS 49
           M + R E +RGY+P+  E LDP   L  GD KE YY+G   D             N+WP+
Sbjct: 79  MKILRNEKHRGYTPVLDELLDPENQLHVGDYKEGYYIGVEVDEDDPESNKPFYGPNKWPA 138

Query: 50  EELLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPG 109
            ++LP WR TME  + + L  GK            D D+F+K   + +  A LRLLHY G
Sbjct: 139 PDILPGWRETMEKFHREALEVGKAVGKIIALALDLDADFFDKPEMLGESIATLRLLHYGG 198

Query: 110 EMGSG-EEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
           ++    + + GA AH+DYG+ITLL TD V GLQ+  +
Sbjct: 199 QVSDPLKGLFGAGAHTDYGLITLLATDHVSGLQICKD 235