Miyakogusa Predicted Gene

Lj4g3v1220440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1220440.1 Non Characterized Hit- tr|I1MV42|I1MV42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30449
PE,70.83,1e-16,seg,NULL,CUFF.48666.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100570.1 | DUF1639 family protein | HC | chr4:41473710-41...    70   5e-13

>Medtr4g100570.1 | DUF1639 family protein | HC |
          chr4:41473710-41470646 | 20130731
          Length = 243

 Score = 69.7 bits (169), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 1  MATTPAPVKSQHLHNFSLPLLKWGATATPNTSNTNHHHRSRRTXXXXXXXXXXXXXXXXR 60
          MATTPA VKSQ LHNFSLP LKWG T   NT+ TN HHRSRR                 R
Sbjct: 1  MATTPASVKSQPLHNFSLPFLKWGGTGKNNTNATN-HHRSRRPPDHASEPDSEPDSRPHR 59

Query: 61 VGSRTARN 68
          +GSRTARN
Sbjct: 60 LGSRTARN 67