Miyakogusa Predicted Gene
- Lj4g3v1202200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1202200.1 tr|A9SWH0|A9SWH0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231271,23.84,6e-17,PPR,Pentatricopeptide repeat;
seg,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,,CUFF.48622.1
(423 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g099200.1 | PPR containing plant protein | HC | chr4:41103... 655 0.0
Medtr4g081540.1 | PPR containing plant protein | HC | chr4:31641... 170 2e-42
Medtr8g062650.1 | hypothetical protein | LC | chr8:26177591-2617... 133 3e-31
Medtr5g044930.1 | PPR containing plant-like protein | HC | chr5:... 126 4e-29
Medtr5g045620.1 | PPR containing plant-like protein | HC | chr5:... 125 8e-29
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 55 9e-08
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 55 1e-07
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 55 1e-07
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 52 1e-06
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 52 1e-06
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 52 1e-06
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 2e-06
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 51 2e-06
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 51 2e-06
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 2e-06
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 2e-06
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 51 2e-06
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 51 2e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 51 2e-06
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-06
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 51 3e-06
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 51 3e-06
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 51 3e-06
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 50 4e-06
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 50 5e-06
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 5e-06
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 50 5e-06
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 50 5e-06
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 6e-06
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 50 6e-06
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 49 7e-06
>Medtr4g099200.1 | PPR containing plant protein | HC |
chr4:41103641-41099252 | 20130731
Length = 686
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/423 (74%), Positives = 351/423 (82%)
Query: 1 MNGLRDEMMELKGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDMNRLRDCH 60
MNGLRDE+MELK HIDGVSA+Y RHY QFYDSLL LHFKFNDIDAA+KLVLDMN +CH
Sbjct: 264 MNGLRDELMELKCHIDGVSASYVRHYRQFYDSLLRLHFKFNDIDAASKLVLDMNSSHNCH 323
Query: 61 ISKECTKRLQKPCFIGIGSSNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALS 120
++E LQKP F+ IGS NLKN LKIHIEPELLQKD+VLK+EGR+ L+FYKGGKL LS
Sbjct: 324 NNEEYRNHLQKPSFVAIGSPNLKNALKIHIEPELLQKDTVLKLEGREGLVFYKGGKLTLS 383
Query: 121 NRAMVMFICGYKKDGQIXXXXXXXXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDIL 180
NRA+ FI GYKKDG+I LY+ GS LCSDVI ACIQMGWLESAHDIL
Sbjct: 384 NRALAKFIIGYKKDGRISELSKLLLSIHGELYSATGSGLCSDVISACIQMGWLESAHDIL 443
Query: 181 DDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEE 240
DD EA GSPMG + Y+LLLSAYQ MQREA+ALLKQMKK+ +LS+DA D+H++C E
Sbjct: 444 DDAEAAGSPMGCDMYILLLSAYQKEEMQREAQALLKQMKKIDFLPELSNDAIDEHVLCRE 503
Query: 241 TAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKI 300
T+ SVGKSDLAVALAQIL EDQT +PLVYNFNSSIFFFCKA MIEDAL+AYR+M +MKI
Sbjct: 504 TSNSVGKSDLAVALAQILNAEDQTDIPLVYNFNSSIFFFCKARMIEDALRAYRKMCEMKI 563
Query: 301 QPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFE 360
+PT QTFA+++CGYSSLGMYREIT WGDIKR MK LV NRDLYELLLLNF+RGGYFE
Sbjct: 564 RPTNQTFAHLVCGYSSLGMYREITFFWGDIKRFMKNNYLVVNRDLYELLLLNFIRGGYFE 623
Query: 361 RVMEVIDHMRNHNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWV 420
RVMEVI HM + NMYTDK +YKSEFLRLHKNLYR LKASDARTEAQSKR EHVQEF+KW
Sbjct: 624 RVMEVIGHMNDRNMYTDKLLYKSEFLRLHKNLYRSLKASDARTEAQSKRLEHVQEFRKWA 683
Query: 421 GID 423
GID
Sbjct: 684 GID 686
>Medtr4g081540.1 | PPR containing plant protein | HC |
chr4:31641729-31645378 | 20130731
Length = 786
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 221/493 (44%), Gaps = 75/493 (15%)
Query: 2 NGLRDEMMELKGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDM-------- 53
NG R+E+M+L+ HI+ + QFY+ LL+ H KF D+D+A+ +VL+M
Sbjct: 296 NGRREELMKLQRHIEEAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLRKAKEAR 355
Query: 54 NRLRDCHISKECTKRLQKPCFIGIGSSNLKNG---------------------------- 85
N L TK + NL N
Sbjct: 356 NSLGSAKFLINTTKTDHSSSPRPASAHNLSNSKDLESVKIDQLIKNDVLSYEEFSKDRNF 415
Query: 86 LKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVMFICGYKKDGQIXXXXX--X 143
LK+ E + + K++ + +LI G L + V + + + G+
Sbjct: 416 LKLEAESKAVLSSLFAKLQTQVDLITTVHGILQPTETIYVKLVKAFLEAGKTKELAVFLL 475
Query: 144 XXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQ 203
++ ++ S+L VI +CI +GWL+ AHD+LD++ G G Y LL AY
Sbjct: 476 KAEREDSPFSNDNSALVH-VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYC 534
Query: 204 NGGMQREAKALLKQMKK--VSLHHKLSDDAFDKHIICEET-------------------- 241
+ +LL+ +K + L + ++ E+T
Sbjct: 535 VANRAADVASLLRDARKAGIQLDSNSYEAMIQSRVLQEDTQGALQLFKEMKEARIPKVSQ 594
Query: 242 ------AYSVGKSD-----LAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALK 290
A SV SD L L Q +K + Q V V+++N+ I FF K +++DA K
Sbjct: 595 QYSGKLAKSVSDSDSDEAALMTKLVQEIK-DGQKVDCGVHDWNNVIHFFSKKRLMQDAEK 653
Query: 291 AYRRMGKMKIQPTIQTFAYMLCGYSSLG-MYREITIVWGDIKRLMKGADLVGNRDLYELL 349
A ++M + P QTF M+ GY+++G Y E+T +WG++K L + + +++L + +
Sbjct: 654 ALKKMRSLGHTPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLASKSSIKFDQELLDSV 713
Query: 350 LLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKR 409
L F+RGG+F R EV+ M M+ DK+ Y+ FL+ HK LY+ KA +TE+Q +
Sbjct: 714 LYTFVRGGFFIRANEVVATMEKGKMFIDKYKYRMLFLKYHKTLYKG-KAPKFQTESQLNK 772
Query: 410 FEHVQEFKKWVGI 422
E FK+W+G+
Sbjct: 773 REAALTFKRWIGM 785
>Medtr8g062650.1 | hypothetical protein | LC |
chr8:26177591-26178406 | 20130731
Length = 190
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 99/185 (53%), Gaps = 54/185 (29%)
Query: 173 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 232
+ SAHDILDD EA GSPMG Y+L SAYQ GMQREAKA LKQMKK++L +LSD+A
Sbjct: 60 INSAHDILDDAEAAGSPMGFNMYILHSSAYQKEGMQREAKARLKQMKKINLQKELSDNAI 119
Query: 233 DKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 292
DKH EET SVGKS+LA+ LAQ+LK E+QTV+
Sbjct: 120 DKHTPYEETLNSVGKSNLAITLAQVLKDENQTVI-------------------------- 153
Query: 293 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 352
T +L G G+ R K LV NRDLYELLLLN
Sbjct: 154 -------------TLTMLLWG----GIKR-----------FTKNNYLVVNRDLYELLLLN 185
Query: 353 FLRGG 357
F+RGG
Sbjct: 186 FIRGG 190
>Medtr5g044930.1 | PPR containing plant-like protein | HC |
chr5:19700063-19702654 | 20130731
Length = 664
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 43/296 (14%)
Query: 163 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 222
++ AC+ +G + AH+ILD++ A G +G Y+ +L AY EA L+ ++
Sbjct: 376 IVNACVSIGLSDKAHNILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSG 435
Query: 223 LHHKLSDDAFDKHIICE------ETAYSVGKS-------DLAVALAQILKG--------- 260
L KL + +D I ++ +S+ + DL + I+ G
Sbjct: 436 L--KLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPEL 493
Query: 261 ---------EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 311
ED + +++NS I FCKAG +EDA + +RRM ++ +P QT+ ++
Sbjct: 494 MAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLI 553
Query: 312 CGYSSLGMYREITIVWGDIKRLMKGADLVG---NRDLYELLLLNFLRGGYFERVMEVIDH 368
GY S Y ++ ++W ++KR + G G +++L + L ++GG+F+ VM+V++
Sbjct: 554 NGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEK 613
Query: 369 MRNHNMYTDKWMYKSEFLRLHKNL-YRRLKASDARTEAQSKRFEHVQEFKKWVGID 423
+ ++ DKW YK F+ HK L RL+ + R + E + FK W G++
Sbjct: 614 SKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVR------KMEALIAFKNWAGLN 663
>Medtr5g045620.1 | PPR containing plant-like protein | HC |
chr5:20016549-20013908 | 20130731
Length = 660
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 43/296 (14%)
Query: 163 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 222
++ AC+ +G + AH ILD++ A G +G Y+ +L AY EA L+ ++
Sbjct: 372 IVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSG 431
Query: 223 LHHKLSDDAFDKHIICE------ETAYSVGKS-------DLAVALAQILKG--------- 260
L KL + +D I ++ +S+ + DL + I+ G
Sbjct: 432 L--KLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPEL 489
Query: 261 ---------EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 311
ED + +++NS I FCKAG +EDA + +RRM ++ +P QT+ ++
Sbjct: 490 MAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLI 549
Query: 312 CGYSSLGMYREITIVWGDIKRLMKGADLVG---NRDLYELLLLNFLRGGYFERVMEVIDH 368
GY S Y ++ ++W ++KR + G G +++L + L ++GG+F+ VM+V++
Sbjct: 550 NGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEK 609
Query: 369 MRNHNMYTDKWMYKSEFLRLHKNL-YRRLKASDARTEAQSKRFEHVQEFKKWVGID 423
+ ++ DKW YK F+ HK L RL+ + R + E + FK W G++
Sbjct: 610 SKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVR------KMEALIAFKNWAGLN 659
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 22/225 (9%)
Query: 164 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 220
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 73 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 130
Query: 221 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 276
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 131 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 181
Query: 277 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 336
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V+ D+ +
Sbjct: 182 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK---- 237
Query: 337 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 381
+LV N + ++ + + G E + M + + + Y
Sbjct: 238 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 282
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 22/225 (9%)
Query: 164 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 220
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 264
Query: 221 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 276
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 265 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 277 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 336
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V+ D+ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK---- 371
Query: 337 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 381
+LV N + ++ + + G E + M + + + Y
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 164 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 220
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 264
Query: 221 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 276
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 265 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 277 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 336
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V D+ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSK---- 371
Query: 337 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYK 382
+LV N + ++ + + G E + M + + YK
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYK 417
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 265 VLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQP---TIQTFAYMLCGYSSLGMYR 321
V P V FN I +C E+AL+ +MG+ P T T LC S L R
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVR 266
Query: 322 EITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 381
++ + MK + L NR+ Y +L+ + + + + EVI+ M M D W Y
Sbjct: 267 DLLLQ-------MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTY 319
Query: 382 KS 383
+
Sbjct: 320 NT 321
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 100/249 (40%), Gaps = 32/249 (12%)
Query: 161 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMK- 219
+ +I C + G + A + ++ + TY +L++ + G+Q+E + + MK
Sbjct: 203 TTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKL 262
Query: 220 ---------------------KVSLHHKLSDDAFDKHIICEETAYSV------GKSDLAV 252
+ + D+ +K I C Y++ L
Sbjct: 263 SGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGE 322
Query: 253 ALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLC 312
A+ + + P ++ +N+ I +C A I+ A++ Y + + PT+ T+ ++
Sbjct: 323 AVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIA 382
Query: 313 GYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNH 372
GYS +G ++ + M+ ++ + Y +LL F+R Y E+ E+ M
Sbjct: 383 GYSKVGNLAGAL----NLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKS 438
Query: 373 NMYTDKWMY 381
+ +D + Y
Sbjct: 439 GLVSDVYTY 447
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 163 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 222
+I A + G A +I+DD+ P R TY L++A + G +EA + K+M
Sbjct: 191 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 250
Query: 223 L-----HHKLSDDAFDK-----------------HIICEETAYSV--------GKSDLAV 252
+ H + AF HI + T +++ + D AV
Sbjct: 251 VGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAV 310
Query: 253 ALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLC 312
+ +K + P V F S I + G IE+ A+ M ++P I ++ +L
Sbjct: 311 DIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLG 370
Query: 313 GYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNH 372
Y++ GM E V+ +IK+ D+V Y LL + R ++ E+ ++ +
Sbjct: 371 AYAARGMENEALQVFNEIKQNGFRPDVVS----YTSLLNAYGRSRKPQKAREIFKMIKRN 426
Query: 373 NM 374
N+
Sbjct: 427 NL 428
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 23/224 (10%)
Query: 173 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 232
+ A I + + G ++Y +L++ + M EA LLK+M HHK
Sbjct: 228 VNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM-----HHK------ 276
Query: 233 DKHIICEETAYS------VGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIE 286
II YS ++ AL + + D+ P + ++S + CK ++
Sbjct: 277 --QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334
Query: 287 DALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLY 346
+A+ +M IQP + T+ ++ G G + V+ D+ L+KG +L N Y
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDL--LVKGHNL--NVYTY 390
Query: 347 ELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHK 390
+++ F G F+ + ++ M ++ + Y+ L L K
Sbjct: 391 TVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFK 434
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 171 GWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDD 230
G + D+ +++ + + TY +L+ + GG +E V+L H + D+
Sbjct: 363 GRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEV---------VTLFHDMVDE 413
Query: 231 AFDKHI-ICEETAYSVGKSDLAVALAQIL-KGEDQTVLPLVYNFNSSIFFFCKAGMIEDA 288
+ ++ E ++ GK L +IL ++ ++P + I + +A + E+A
Sbjct: 414 NIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEA 473
Query: 289 LKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIV 326
L A+ M ++ PT++T+ ++C +S G+Y+E+ +
Sbjct: 474 LVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKEVEAI 511
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 117 LALSNRAMVMFICGYKKDGQIXXXXXXXXXXQEGLYAVAGSSLC-SDVIGACIQMG--WL 173
+A S A I Y ++GQ ++ V+ S L + VI AC + G W
Sbjct: 169 VARSVFAYTAVINAYGRNGQFQTSVELLESMKQ--ERVSPSILTYNTVINACARGGLDW- 225
Query: 174 ESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFD 233
E + ++ G TY LLSA + G+ EA+ + + M + + ++ ++
Sbjct: 226 EGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYL 285
Query: 234 KHIICEETAYSVGKSDLAVALAQILKG-EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 292
H + GK + ++++L+ E LP V ++N + + G I++++ +
Sbjct: 286 VH--------TFGKLNKLEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVF 337
Query: 293 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 352
R+M + P T++ +L Y G Y ++ D+ MK ++ + Y +L+
Sbjct: 338 RQMQEAGCVPNSATYSILLNLYGKHGRYDDVR----DLFLEMKVSNTDPDAGTYNILIQV 393
Query: 353 FLRGGYFERVMEVIDHMRNHNMYTDKWMYK 382
F GGYF+ V+ + M + N+ + Y+
Sbjct: 394 FGEGGYFKEVVTLFHDMVDENIEPNMETYE 423
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 32/233 (13%)
Query: 173 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKV-----SLHHKL 227
LE ++L ++E+ GS +Y +LL AY + G +E+ + +QM++ S + +
Sbjct: 295 LEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSI 354
Query: 228 SDDAFDKHIICEET-----AYSVGKSDLAVALAQILK---GE---------------DQT 264
+ + KH ++ V +D IL GE D+
Sbjct: 355 LLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDEN 414
Query: 265 VLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREIT 324
+ P + + IF K G+ EDA K M + I P+ + + ++ Y +Y E
Sbjct: 415 IEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEAL 474
Query: 325 IVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 377
+ + + + + + Y L+ +F RGG ++ V ++ M + D
Sbjct: 475 VAFNTMNEVGSTPTV----ETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRD 523
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 34/251 (13%)
Query: 163 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 222
+I A + G A +I+DD+ P R TY L++A + G +EA + K+M
Sbjct: 52 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 111
Query: 223 L-----HHKLSDDAFDK-----------------HIICEETAYSV--------GKSDLAV 252
+ H + AF HI + T +++ + D AV
Sbjct: 112 VGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAV 171
Query: 253 ALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLC 312
+ +K + P V F S I + G IE+ A+ M ++P I ++ +L
Sbjct: 172 DIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLG 231
Query: 313 GYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNH 372
Y++ GM E V+ +IK+ D+V Y LL + R ++ E+ ++ +
Sbjct: 232 AYAARGMENEALQVFNEIKQNGFRPDVVS----YTSLLNAYGRSRKPQKAREIFKMIKRN 287
Query: 373 NMYTDKWMYKS 383
N+ + Y +
Sbjct: 288 NLKPNIVSYNA 298
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 181 DDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQM--KKVSLHHKLSDDAFDKHIIC 238
D V G + + +Y L++ GG REA LL+Q+ K V H + + D+ +C
Sbjct: 162 DKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDR--MC 219
Query: 239 EETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKM 298
++ +V LA+ + P V +N+ + C G ++DA+ ++ M
Sbjct: 220 KDKLVNVAFDLYYEMLAK-------RISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSE 272
Query: 299 KIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGY 358
I PT+ TF ++ G+ G ++ +V +M A + N Y L+ F G
Sbjct: 273 NINPTVYTFNILVDGFCKEGKVKDAKVVLA----VMMKAGVKLNAVTYSTLIRGFCIVGK 328
Query: 359 FERVMEVIDHM----RNHNMYT 376
+ +++ + M N N+YT
Sbjct: 329 LKEAVDLFNKMILGKVNPNVYT 350
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 114/266 (42%), Gaps = 20/266 (7%)
Query: 121 NRAMVMFICGYKKDGQIX-XXXXXXXXXQEGLYA--VAGSSLCSDVIGACIQMGWLESAH 177
N+ + + + G+ K+G++ ++G+ V SSL G C+ + + A
Sbjct: 267 NKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMD---GYCL-VNEVNKAE 322
Query: 178 DILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHII 237
I + + G ++Y ++++ + M EA L K+M HHK F I
Sbjct: 323 SIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEM-----HHK---QIFPDVIT 374
Query: 238 CEETAYSVGKSD-LAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMG 296
+ KS ++ AL + + D+ V P + +NS + CK ++ A+ +
Sbjct: 375 YSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFK 434
Query: 297 KMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRG 356
IQP++ T+ ++ G G ++ ++ D+ L+KG ++ N Y +++ F
Sbjct: 435 DQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDL--LVKGYNITVNT--YTVMIQGFCSH 490
Query: 357 GYFERVMEVIDHMRNHNMYTDKWMYK 382
G + + ++ M + D Y+
Sbjct: 491 GLLDESLALLSKMEENGCIPDAVTYE 516
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 15/210 (7%)
Query: 176 AHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKH 235
A +L D+E+ G TY L+SA+ GG EA L QM + + D F
Sbjct: 366 ALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQM----VEKGIKPDVFTYT 421
Query: 236 IICE--ETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYR 293
+ E A GK + A + +K P + FN+ I GM + +K +
Sbjct: 422 TLLSGFEKA---GKDEFAFEVYDEMKAAG--CKPNICTFNALIKMHGNRGMFVEMMKVFE 476
Query: 294 RMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNF 353
+ + P I T+ +L + M E+ V+ ++KR + V RD + L+ +
Sbjct: 477 EIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR----SGFVPERDTFNTLISAY 532
Query: 354 LRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
R G F++ M V M + D Y +
Sbjct: 533 SRCGSFDQAMAVYKSMLESGVSPDLSTYNA 562
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 15/210 (7%)
Query: 176 AHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKH 235
A +L D+E+ G TY L+SA+ GG EA L QM + + D F
Sbjct: 366 ALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQM----VEKGIKPDVFTYT 421
Query: 236 IICE--ETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYR 293
+ E A GK + A + +K P + FN+ I GM + +K +
Sbjct: 422 TLLSGFEKA---GKDEFAFEVYDEMKAAG--CKPNICTFNALIKMHGNRGMFVEMMKVFE 476
Query: 294 RMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNF 353
+ + P I T+ +L + M E+ V+ ++KR + V RD + L+ +
Sbjct: 477 EIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR----SGFVPERDTFNTLISAY 532
Query: 354 LRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
R G F++ M V M + D Y +
Sbjct: 533 SRCGSFDQAMAVYKSMLESGVSPDLSTYNA 562
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 154 VAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKA 213
V L +G +MG + A +D ++ G + Y L + A G EA
Sbjct: 797 VPDKELIETYLGCLCEMGRILDARKCIDSLQRFGYTVPL-CYSLFIRALCRAGKVEEALK 855
Query: 214 LLKQM--KKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYN 271
L++++ +K+++ KL+ + ++ K L AL ++ + + + + P ++
Sbjct: 856 LVEEVGAEKINVE-KLTYGSIVHGLL--------QKGKLEEALTKVSRMKQEGITPTIHV 906
Query: 272 FNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIK 331
+ S I F K +E A++ Y M + +P + T++ ++ GY ++G Y + W
Sbjct: 907 YTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYND---AWNVFY 963
Query: 332 RLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHK 390
R MK + Y + L + G E M +I M + +++ F L++
Sbjct: 964 R-MKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNR 1021
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 173 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 232
+E A + +++A G T+ +L+ AY + ++LL +MK L K + +++
Sbjct: 370 VEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGL--KPNANSY 427
Query: 233 DKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 292
C +AY K +A LK + + P +++ + I + +G E A +
Sbjct: 428 ----TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVF 483
Query: 293 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 352
M + I+P+I+T+ +L + +G + +W +LM + G + + +L+
Sbjct: 484 ENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIW----KLMMSEKVKGTQVTFNILVDG 539
Query: 353 FLRGGYFERVMEVIDH 368
F + G F +VI
Sbjct: 540 FAKQGLFMEARDVISE 555
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 161 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK 220
+++I AC G + A ++ + G T+ ++L+A+++G +A + + +K
Sbjct: 20 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKG 79
Query: 221 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 280
+ + H + + Y D AV + +K + P V F S I +
Sbjct: 80 THIRPDTTTHNIIIHCLVKLKQY-----DKAVDIFNSMKEKKSECHPDVVTFTSMIHLYS 134
Query: 281 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLV 340
G IE+ A+ M ++P I ++ +L Y++ GM E V+ +IK+ D+V
Sbjct: 135 VCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVV 194
Query: 341 GNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
Y LL + R ++ E+ ++ +N+ + Y +
Sbjct: 195 S----YTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNA 233
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 262 DQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRM---GKMKI-QPTIQTFAYMLCGYSSL 317
++ +LP V FNS I C+AG + +A + +R M G++ + +P + TF ML G+
Sbjct: 247 EKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQE 306
Query: 318 GMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 377
GM E + ++ + KG + V + + Y LL LR G V+D M + + +
Sbjct: 307 GMMEEARSL---VETMKKGGNFV-SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPN 362
Query: 378 KWMY 381
+ Y
Sbjct: 363 IYSY 366
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 13/225 (5%)
Query: 160 CSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMK 219
C+ VI AC + G L+ A DD++ G G TY +L + G+ EA +LK+M+
Sbjct: 311 CTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEME 370
Query: 220 KVSLHHKLSDDAFDKHIICEETAY-SVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFF 278
+ DA + + AY G D A+ + + V+P + + I
Sbjct: 371 D----NNCEPDAITYNELV--AAYVRAGFHDEGAAVIDTMAS--KGVMPNAITYTTVINA 422
Query: 279 FCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGAD 338
+ KAG + AL+ + +M ++ P + T+ +L ++ + D+K + G
Sbjct: 423 YGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMK--LNGCP 480
Query: 339 LVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
+R + +L G + V +V+ M+N DK + +
Sbjct: 481 --PDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNT 523
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 165 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 224
G C +MG ++ A +L + + + Y L++ Y G EAK LL Q ++
Sbjct: 255 GLC-RMGQVDEARVLLSKIPNPNTVL----YNTLINGYVASGRFEEAKDLLYQNMVIA-- 307
Query: 225 HKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGM 284
DAF +I+ + K L AL + + ++ P V + I FCK G
Sbjct: 308 -GFEPDAFMFNIMIDGLC---KKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGK 363
Query: 285 IEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRD 344
I+DA + Y M +P I TF ++ G E ++ D+ ++G ++ N
Sbjct: 364 IQDAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDM--FLEG--VIANTI 419
Query: 345 LYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 381
Y L+ FLRG ++ ++++ M D Y
Sbjct: 420 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITY 456
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 173 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 232
L+ A + ++ + P+ TY +L+ ++ GM A++ +M + +
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGI--------- 424
Query: 233 DKHIICEETAYSVGK--------SDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGM 284
ET Y DL+ A K ++ + P F + I +CK
Sbjct: 425 ------RETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQ 478
Query: 285 IEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGD-IKRLMKGADLVGNR 343
+E A K YR M + +I P++ TF ++ G S E + ++ + ++R +K ++
Sbjct: 479 VEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT--- 535
Query: 344 DLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
Y +++ + + ++ E+++ M ++ + D + Y+
Sbjct: 536 --YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 37/249 (14%)
Query: 165 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQM--KKVS 222
G C++ G + A D V A G + + +Y L++ G A LLK++ K V
Sbjct: 140 GLCLK-GHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 198
Query: 223 LHH-------------KLSDDAFD-------KHIICEETAY--------SVGKSDLAVAL 254
+ KL +DAFD K I + Y +V K + A+ L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 255 AQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY 314
+K E+ + P VY FN + FCK G + DA M K I+P + T+ ++ GY
Sbjct: 259 FNKMKKEN--INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316
Query: 315 SSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 374
S+ + DI M ++ N +Y ++ F + + + + + MR +
Sbjct: 317 CSINKVNK----AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 375 YTDKWMYKS 383
+ Y S
Sbjct: 373 IPNVVTYSS 381
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 37/249 (14%)
Query: 165 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQM--KKVS 222
G C++ G + A D V A G + + +Y L++ G A LLK++ K V
Sbjct: 140 GLCLK-GHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 198
Query: 223 LHH-------------KLSDDAFD-------KHIICEETAY--------SVGKSDLAVAL 254
+ KL +DAFD K I + Y +V K + A+ L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 255 AQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY 314
+K E+ + P VY FN + FCK G + DA M K I+P + T+ ++ GY
Sbjct: 259 FNKMKKEN--INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316
Query: 315 SSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 374
S+ + DI M ++ N +Y ++ F + + + + + MR +
Sbjct: 317 CSINKVNK----AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 375 YTDKWMYKS 383
+ Y S
Sbjct: 373 IPNVVTYSS 381
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 46/248 (18%)
Query: 179 ILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIIC 238
D++ A G R TY LLS + GM A+ LL +M + + DAF +
Sbjct: 271 FFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQ----KGIVRDAFTYNTYL 326
Query: 239 EETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRM--- 295
+ T G+ DLA + + + + V P V +++ I KA ++EDAL Y M
Sbjct: 327 D-TLCKGGQIDLARRVLEEMS--SRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLR 383
Query: 296 --------------------------GKMK------IQPTIQTFAYMLCGYSSLGMYREI 323
G+ K ++ + T+ +L GY GMY E+
Sbjct: 384 SISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEV 443
Query: 324 TIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 383
++ + MK ++ N Y ++ + +GG F+ M+V + + D Y S
Sbjct: 444 RRLFEE----MKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTS 499
Query: 384 EFLRLHKN 391
L KN
Sbjct: 500 IIDSLCKN 507
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 32/266 (12%)
Query: 165 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 224
G C+ + + A I + + G ++Y ++++ + EA L K+M +
Sbjct: 339 GYCL-VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR---- 393
Query: 225 HKLSDDAFDKHIICEETAYS-----VGKSD-LAVALAQILKGEDQTVLPLVYNFNSSIFF 278
K+II + YS + KS ++ AL + + D+ V P + +NS +
Sbjct: 394 ---------KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Query: 279 FCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGAD 338
CK ++ A+ ++ IQP + T++ ++ G G + V+ + L+KG +
Sbjct: 445 LCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGL--LVKGHN 502
Query: 339 LVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHK-------- 390
L N D Y +++ F G F + ++ M ++ D Y+ L L K
Sbjct: 503 L--NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560
Query: 391 NLYRRLKASDARTEAQSKRFEHVQEF 416
L R + A R + F+ +E+
Sbjct: 561 KLLREMIARGVRPRQIAIWFQKKKEY 586
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 272 FNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIK 331
FN+ I+ C+ G++++A + ++ M I P + +++ ++ G+ G + + V+ +
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE-- 311
Query: 332 RLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 381
M+ + ++ N Y +L+ F + G ++ +EV + M+N + D + Y
Sbjct: 312 --MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY 359
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 194 TYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHII---CEETAYSVGKSDL 250
TY L+ G +EA L ++M VS + D +I C E GK+D
Sbjct: 275 TYSTLMDGLCRNGRLKEAFELFEEM--VSKDQIVPDPLTYNVLINGFCRE-----GKADR 327
Query: 251 AVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYM 310
A + + +K + P V+N+++ + CKAG ++DA M ++P T+ +
Sbjct: 328 ARNVIEFMK--NNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSL 385
Query: 311 LCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMR 370
+ +S G E + ++K AD V + ++L R G F+ +++I+ +
Sbjct: 386 INFFSRNGQIDEAIELLTEMKENDCQADTVT----FNVILGGLCREGRFDEALDMIEKLP 441
Query: 371 NHNMYTDKWMYKSEFLRLHKNLYRR 395
+Y +K Y+ L +N R
Sbjct: 442 QQGVYLNKGSYRIVLNSLTQNCELR 466