Miyakogusa Predicted Gene

Lj4g3v1200810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1200810.1 tr|O49154|O49154_SOYBN Ferredoxin-dependent
glutamate synthase (Fragment) OS=Glycine max GN=glu PE=2,94.86,0,no
description,Aldolase-type TIM barrel; no description,Glutamate
synthase, alpha subunit,
C-termina,NODE_9702_length_1012_cov_1039.209473.path2.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089970.1 | ferredoxin-dependent glutamate synthase | HC |...   684   0.0  
Medtr1g027020.1 | NADH glutamate synthase | HC | chr1:8906141-89...   322   3e-88

>Medtr7g089970.1 | ferredoxin-dependent glutamate synthase | HC |
            chr7:35266109-35288293 | 20130731
          Length = 1612

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/350 (93%), Positives = 339/350 (96%)

Query: 1    MYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVA 60
            MYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVA
Sbjct: 1076 MYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVA 1135

Query: 61   SGVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVD 120
            SGVAKGNAD+IQISGHDGGTGASPISSIKHAGGPWELGLTE+HQTL+ENGLRERVILRVD
Sbjct: 1136 SGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLVENGLRERVILRVD 1195

Query: 121  GGFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPG 180
            GGFRSGVDVMMAA MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPG
Sbjct: 1196 GGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPG 1255

Query: 181  VPGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSV 240
            VPGDLVN FLYVAEEVRGTLAQLGYEKLDDIIGRT+LL PRD+SLVKTQHLDLSYILS+V
Sbjct: 1256 VPGDLVNLFLYVAEEVRGTLAQLGYEKLDDIIGRTELLRPRDVSLVKTQHLDLSYILSNV 1315

Query: 241  GLPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIA 300
            GLPK SST IRNQE HTNGPVLDDVLLADP++ADAIENEK VSKTIKIYN+DR+ CGRIA
Sbjct: 1316 GLPKLSSTEIRNQEPHTNGPVLDDVLLADPKIADAIENEKAVSKTIKIYNVDRSACGRIA 1375

Query: 301  GVIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
            GVIAKKYGDTGFAG LNITFTGSAGQSF CFLTPGM IRLVGE+NDYVGK
Sbjct: 1376 GVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGK 1425


>Medtr1g027020.1 | NADH glutamate synthase | HC | chr1:8906141-8918572
            | 20130731
          Length = 2194

 Score =  322 bits (825), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 172/355 (48%), Positives = 233/355 (65%), Gaps = 11/355 (3%)

Query: 3    IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
            IA  RNS  GV LISPPPHHDIYSIEDLAQLI DL   NP A++SVKLV+EAG+G +ASG
Sbjct: 1097 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEAGVGVIASG 1156

Query: 63   VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
            V KG+A+ + ISGHDGGTGAS  + IK AG PWELGL ETHQTL+ N LR R  L+ DG 
Sbjct: 1157 VVKGHAEHVLISGHDGGTGASRWTGIKSAGLPWELGLAETHQTLVANDLRGRTTLQTDGQ 1216

Query: 123  FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
             ++G DV +AA +GA+EYGF +  +I  GC+M R CH N CPVG+A+Q   LR +F G P
Sbjct: 1217 LKTGRDVAIAALLGAEEYGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1276

Query: 183  GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLV----KTQHLDLSYILS 238
              ++N+   VAEE+R  ++QLG+  +++++GR+D+L   D  +V    K +++DLS +L 
Sbjct: 1277 EHVINFLFMVAEEMREIMSQLGFRTVNEMVGRSDMLE-VDKEVVKGNAKLENIDLSLLLR 1335

Query: 239  SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
                  P+ +   ++ Q+ H     LD+ L++      A+E    V     I N +RAV 
Sbjct: 1336 PAAELRPEAAQYCVQKQD-HGLDMALDNKLISLSNA--ALEKGLPVYIETPICNTNRAVG 1392

Query: 297  GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
              ++  + K+Y   G  A  ++I FTGSAGQSF  FL PG+ + L G+SNDY+GK
Sbjct: 1393 TMLSHEVTKRYNLAGLPADTIHIQFTGSAGQSFGAFLCPGITLELEGDSNDYIGK 1447