Miyakogusa Predicted Gene

Lj4g3v1153090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1153090.1 Non Characterized Hit- tr|I1J9L3|I1J9L3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11096
PE,83.45,0,TMFOUR,Tetraspanin; SUBFAMILY NOT NAMED,NULL;
TETRASPANIN,NULL;
Tetraspannin,Tetraspanin/Peripherin;,
NODE_2492_length_1369_cov_153.056244.path2.1
         (283 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g014080.2 | tobamovirus multiplication protein 2A | HC | c...   418   e-117
Medtr5g014080.1 | tobamovirus multiplication protein 2A | HC | c...   418   e-117
Medtr5g014080.3 | tobamovirus multiplication protein 2A | HC | c...   418   e-117
Medtr5g014080.5 | tobamovirus multiplication protein 2A | HC | c...   418   e-117
Medtr5g014080.4 | tobamovirus multiplication protein 2A | HC | c...   418   e-117
Medtr4g098860.2 | tetraspanin family protein | HC | chr4:4078902...   395   e-110
Medtr4g098860.1 | tetraspanin family protein | HC | chr4:4078881...   395   e-110
Medtr1g069185.1 | tetraspanin family protein | HC | chr1:2977881...   146   2e-35
Medtr4g022920.1 | tetraspanin family protein | LC | chr4:7711297...   102   3e-22

>Medtr5g014080.2 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 225/288 (78%), Gaps = 5/288 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSD----DDTPAVSPASDDQ 56
           + CRGFWECLLKL NFI+T+ GL +VGYGIYLLV F KAS  D      TP +SP S D 
Sbjct: 2   VCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDS 61

Query: 57  ALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCC 116
           ALIQ GRPML+AVSLS++IFDKLPKAWFIYLFIG+G VLFV+SCFGCIGA  RNGCCL C
Sbjct: 62  ALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLIC 121

Query: 117 YSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXX 176
           YSILVALLILVELGCAAF+FFDKSWKE +P+DKTGDFD IY FLRENW+IV+WVA     
Sbjct: 122 YSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVI 181

Query: 177 XXXXXXXXXXXXRASNRPADYDSDEEFINPRQQARQPLL-NRXXXXXXXXXXXXXLDQRP 235
                       RA NRPADYDSD+E INPRQQ RQPLL NR              DQRP
Sbjct: 182 FEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRP 241

Query: 236 SRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           +RNDAWSTRMREKYGLDTSEFTYNPSESQRFQQ N+ PTEE+SRCTIM
Sbjct: 242 NRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM 289


>Medtr5g014080.1 | tobamovirus multiplication protein 2A | HC |
           chr5:4658815-4665681 | 20130731
          Length = 289

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 225/288 (78%), Gaps = 5/288 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSD----DDTPAVSPASDDQ 56
           + CRGFWECLLKL NFI+T+ GL +VGYGIYLLV F KAS  D      TP +SP S D 
Sbjct: 2   VCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDS 61

Query: 57  ALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCC 116
           ALIQ GRPML+AVSLS++IFDKLPKAWFIYLFIG+G VLFV+SCFGCIGA  RNGCCL C
Sbjct: 62  ALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLIC 121

Query: 117 YSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXX 176
           YSILVALLILVELGCAAF+FFDKSWKE +P+DKTGDFD IY FLRENW+IV+WVA     
Sbjct: 122 YSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVI 181

Query: 177 XXXXXXXXXXXXRASNRPADYDSDEEFINPRQQARQPLL-NRXXXXXXXXXXXXXLDQRP 235
                       RA NRPADYDSD+E INPRQQ RQPLL NR              DQRP
Sbjct: 182 FEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRP 241

Query: 236 SRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           +RNDAWSTRMREKYGLDTSEFTYNPSESQRFQQ N+ PTEE+SRCTIM
Sbjct: 242 NRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM 289


>Medtr5g014080.3 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 225/288 (78%), Gaps = 5/288 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSD----DDTPAVSPASDDQ 56
           + CRGFWECLLKL NFI+T+ GL +VGYGIYLLV F KAS  D      TP +SP S D 
Sbjct: 2   VCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDS 61

Query: 57  ALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCC 116
           ALIQ GRPML+AVSLS++IFDKLPKAWFIYLFIG+G VLFV+SCFGCIGA  RNGCCL C
Sbjct: 62  ALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLIC 121

Query: 117 YSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXX 176
           YSILVALLILVELGCAAF+FFDKSWKE +P+DKTGDFD IY FLRENW+IV+WVA     
Sbjct: 122 YSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVI 181

Query: 177 XXXXXXXXXXXXRASNRPADYDSDEEFINPRQQARQPLL-NRXXXXXXXXXXXXXLDQRP 235
                       RA NRPADYDSD+E INPRQQ RQPLL NR              DQRP
Sbjct: 182 FEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRP 241

Query: 236 SRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           +RNDAWSTRMREKYGLDTSEFTYNPSESQRFQQ N+ PTEE+SRCTIM
Sbjct: 242 NRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM 289


>Medtr5g014080.5 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 225/288 (78%), Gaps = 5/288 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSD----DDTPAVSPASDDQ 56
           + CRGFWECLLKL NFI+T+ GL +VGYGIYLLV F KAS  D      TP +SP S D 
Sbjct: 2   VCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDS 61

Query: 57  ALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCC 116
           ALIQ GRPML+AVSLS++IFDKLPKAWFIYLFIG+G VLFV+SCFGCIGA  RNGCCL C
Sbjct: 62  ALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLIC 121

Query: 117 YSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXX 176
           YSILVALLILVELGCAAF+FFDKSWKE +P+DKTGDFD IY FLRENW+IV+WVA     
Sbjct: 122 YSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVI 181

Query: 177 XXXXXXXXXXXXRASNRPADYDSDEEFINPRQQARQPLL-NRXXXXXXXXXXXXXLDQRP 235
                       RA NRPADYDSD+E INPRQQ RQPLL NR              DQRP
Sbjct: 182 FEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRP 241

Query: 236 SRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           +RNDAWSTRMREKYGLDTSEFTYNPSESQRFQQ N+ PTEE+SRCTIM
Sbjct: 242 NRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM 289


>Medtr5g014080.4 | tobamovirus multiplication protein 2A | HC |
           chr5:4658815-4665681 | 20130731
          Length = 289

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 225/288 (78%), Gaps = 5/288 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSD----DDTPAVSPASDDQ 56
           + CRGFWECLLKL NFI+T+ GL +VGYGIYLLV F KAS  D      TP +SP S D 
Sbjct: 2   VCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDS 61

Query: 57  ALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCC 116
           ALIQ GRPML+AVSLS++IFDKLPKAWFIYLFIG+G VLFV+SCFGCIGA  RNGCCL C
Sbjct: 62  ALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLIC 121

Query: 117 YSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXX 176
           YSILVALLILVELGCAAF+FFDKSWKE +P+DKTGDFD IY FLRENW+IV+WVA     
Sbjct: 122 YSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVI 181

Query: 177 XXXXXXXXXXXXRASNRPADYDSDEEFINPRQQARQPLL-NRXXXXXXXXXXXXXLDQRP 235
                       RA NRPADYDSD+E INPRQQ RQPLL NR              DQRP
Sbjct: 182 FEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRP 241

Query: 236 SRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           +RNDAWSTRMREKYGLDTSEFTYNPSESQRFQQ N+ PTEE+SRCTIM
Sbjct: 242 NRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM 289


>Medtr4g098860.2 | tetraspanin family protein | HC |
           chr4:40789028-40782918 | 20130731
          Length = 280

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/283 (71%), Positives = 221/283 (78%), Gaps = 3/283 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MACRG WECLLKL NFI+T+ GL MVGYGIYLLVEF +AS   D++  +S  SDDQ L+Q
Sbjct: 1   MACRGCWECLLKLLNFILTITGLAMVGYGIYLLVEFSRAS---DNSMMLSAPSDDQTLVQ 57

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
           LGRPML+A+ LS++IFD LPKAWFIYLFIG+G VLFVISCFGCI +  RNGCCL CYSIL
Sbjct: 58  LGRPMLMALPLSDNIFDNLPKAWFIYLFIGVGAVLFVISCFGCIASMTRNGCCLSCYSIL 117

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           V LLILVELGCAAFIFFDKSWKE +P DKTGDFD +Y FLRENW IVKWVA         
Sbjct: 118 VVLLILVELGCAAFIFFDKSWKEEIPRDKTGDFDMVYNFLRENWTIVKWVALGIVIFEAL 177

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDA 240
                   RA+NRP DYDSDEEFINPRQQARQPLLNR              D R +RNDA
Sbjct: 178 LFILALIVRAANRPVDYDSDEEFINPRQQARQPLLNRPAGPAPGVPVTGTTDPRSNRNDA 237

Query: 241 WSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           WSTRMREKYGLDTSEFTYNPSESQRFQQVN+ P EERSRCTIM
Sbjct: 238 WSTRMREKYGLDTSEFTYNPSESQRFQQVNSQPAEERSRCTIM 280


>Medtr4g098860.1 | tetraspanin family protein | HC |
           chr4:40788819-40782902 | 20130731
          Length = 280

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/283 (71%), Positives = 221/283 (78%), Gaps = 3/283 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MACRG WECLLKL NFI+T+ GL MVGYGIYLLVEF +AS   D++  +S  SDDQ L+Q
Sbjct: 1   MACRGCWECLLKLLNFILTITGLAMVGYGIYLLVEFSRAS---DNSMMLSAPSDDQTLVQ 57

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
           LGRPML+A+ LS++IFD LPKAWFIYLFIG+G VLFVISCFGCI +  RNGCCL CYSIL
Sbjct: 58  LGRPMLMALPLSDNIFDNLPKAWFIYLFIGVGAVLFVISCFGCIASMTRNGCCLSCYSIL 117

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           V LLILVELGCAAFIFFDKSWKE +P DKTGDFD +Y FLRENW IVKWVA         
Sbjct: 118 VVLLILVELGCAAFIFFDKSWKEEIPRDKTGDFDMVYNFLRENWTIVKWVALGIVIFEAL 177

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDA 240
                   RA+NRP DYDSDEEFINPRQQARQPLLNR              D R +RNDA
Sbjct: 178 LFILALIVRAANRPVDYDSDEEFINPRQQARQPLLNRPAGPAPGVPVTGTTDPRSNRNDA 237

Query: 241 WSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           WSTRMREKYGLDTSEFTYNPSESQRFQQVN+ P EERSRCTIM
Sbjct: 238 WSTRMREKYGLDTSEFTYNPSESQRFQQVNSQPAEERSRCTIM 280


>Medtr1g069185.1 | tetraspanin family protein | HC |
           chr1:29778816-29783451 | 20130731
          Length = 249

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 131/248 (52%), Gaps = 19/248 (7%)

Query: 10  LLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQLGRPMLLAV 69
           LLK  NF+   +GL+++ Y I++L ++      D  TP   P       + L  P   + 
Sbjct: 13  LLKFLNFLQAFVGLSILLYSIWMLNQW------DHFTPQ-PPLPH----LSLSLPRSFSP 61

Query: 70  SLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILVEL 129
             +  I   LP  WFIY F+ +G+++  I+ FGCI A + NGCCLC Y++L+ +L+L+E 
Sbjct: 62  QFTSDI--NLPAPWFIYAFMCVGILVCCIAFFGCIAAEIINGCCLCFYTVLITVLVLLEA 119

Query: 130 GCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXXXXXXXXXXR 189
              AFI  D+ W+E +P D TG   +I  F+ +N +I +WV                  R
Sbjct: 120 ALVAFIAIDRQWQEDLPVDPTGQLASIRSFIEDNQDISRWVGIAVLVVQALSLLVALILR 179

Query: 190 A--SNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDAWSTRMRE 247
           A  S R AD+D +EE+ + R ++R+PLLN               D R + +D WS+RMRE
Sbjct: 180 ATVSTRRADFDDEEEY-DVRGRSREPLLNHQSGQTSGISKG---DIRGNLSDVWSSRMRE 235

Query: 248 KYGLDTSE 255
           KYGL+  +
Sbjct: 236 KYGLNNGD 243


>Medtr4g022920.1 | tetraspanin family protein | LC |
           chr4:7711297-7709623 | 20130731
          Length = 280

 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 25/217 (11%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MA R F+E +LK+ N +  + GL  +GYG+    ++                   Q L  
Sbjct: 1   MAKRPFFEFILKVINLVFFVWGLGTLGYGLACFFKW------------------KQTLPN 42

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
               +LLA    E+    LPKA FIY+ IGIG +L +ISC G IG  +R+ CCL  Y + 
Sbjct: 43  GSHRLLLAQQSQET----LPKALFIYVMIGIGAILLIISCVGYIGTALRSPCCLLTYCVF 98

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           +  LI+VELG A FIFFD   K+V+P D   D   IY F  ++W I +W+A         
Sbjct: 99  LVPLIIVELGIALFIFFDHR-KQVIPKDVNEDI--IYNFFNDHWKIFRWIALGEFILQII 155

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNR 217
                   R+    A YDSD+E +    ++R+   NR
Sbjct: 156 ALILAIYLRSVFSCACYDSDDERVQDFLRSRKQSYNR 192