Miyakogusa Predicted Gene

Lj4g3v1108080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1108080.1 Non Characterized Hit- tr|I2CPL1|I2CPL1_9STRA
Uncharacterized protein (Fragment) OS=Nannochloropsis
,39.36,0.00000001,tRNA_deacylase,D-aminoacyl-tRNA deacylase;
AF0625-like,NULL,gene.g53999.t1.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g066120.3 | D-aminoacyl-tRNA deacylase | HC | chr8:2747031...   228   7e-61
Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC | chr8:2747029...   228   1e-60
Medtr8g066120.2 | D-aminoacyl-tRNA deacylase | HC | chr8:2747031...   228   1e-60

>Medtr8g066120.3 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470317-27463877 | 20130731
          Length = 242

 Score =  228 bits (582), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 113/123 (91%)

Query: 1   MPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDLDKRWEEVTGEVVDEVIFFSKHTA 60
           MPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED LD RWEEVTGEVVDEVIF SKHTA
Sbjct: 69  MPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYLDTRWEEVTGEVVDEVIFLSKHTA 128

Query: 61  VSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRMGPWLRLLKKIAEARNLVPEFE 120
            SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPR+GPW+RLLK IA+A NLVPEFE
Sbjct: 129 ASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRIGPWIRLLKNIAQAHNLVPEFE 188

Query: 121 VYF 123
           +  
Sbjct: 189 ITL 191


>Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470291-27463868 | 20130731
          Length = 313

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 113/123 (91%)

Query: 1   MPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDLDKRWEEVTGEVVDEVIFFSKHTA 60
           MPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED LD RWEEVTGEVVDEVIF SKHTA
Sbjct: 24  MPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYLDTRWEEVTGEVVDEVIFLSKHTA 83

Query: 61  VSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRMGPWLRLLKKIAEARNLVPEFE 120
            SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPR+GPW+RLLK IA+A NLVPEFE
Sbjct: 84  ASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRIGPWIRLLKNIAQAHNLVPEFE 143

Query: 121 VYF 123
           +  
Sbjct: 144 ITL 146


>Medtr8g066120.2 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470317-27463868 | 20130731
          Length = 271

 Score =  228 bits (580), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 113/123 (91%)

Query: 1   MPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDLDKRWEEVTGEVVDEVIFFSKHTA 60
           MPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED LD RWEEVTGEVVDEVIF SKHTA
Sbjct: 69  MPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYLDTRWEEVTGEVVDEVIFLSKHTA 128

Query: 61  VSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRMGPWLRLLKKIAEARNLVPEFE 120
            SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPR+GPW+RLLK IA+A NLVPEFE
Sbjct: 129 ASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRIGPWIRLLKNIAQAHNLVPEFE 188

Query: 121 VYF 123
           +  
Sbjct: 189 ITL 191