Miyakogusa Predicted Gene

Lj4g3v1108050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1108050.1 Non Characterized Hit- tr|I3SP65|I3SP65_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.83,3e-18,
,gene.g53996.t1.1
         (46 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC | chr8:2747029...    76   8e-15

>Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470291-27463868 | 20130731
          Length = 313

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 40/46 (86%), Gaps = 3/46 (6%)

Query: 1   MEDPNNAKGERNTEIGGTWKESIKAAYEASKSAFPGGEILAHLDHK 46
           MEDP   KGE N EIGGTWK+SIKAAYEA+KSAFPGGEI+AHLD K
Sbjct: 243 MEDP---KGETNVEIGGTWKQSIKAAYEATKSAFPGGEIIAHLDQK 285