Miyakogusa Predicted Gene

Lj4g3v1037670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1037670.1 Non Characterized Hit- tr|B8BJ41|B8BJ41_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,47.13,0.0000000000001,Med4,Mediator complex, subunit Med4;
seg,NULL,CUFF.48379.1
         (401 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g075790.1 | vitamin-D-receptor interacting mediator subuni...   518   e-147
Medtr8g075790.2 | vitamin-D-receptor interacting mediator subuni...   518   e-147
Medtr6g089780.1 | vitamin-D-receptor interacting mediator subuni...   479   e-135

>Medtr8g075790.1 | vitamin-D-receptor interacting mediator subunit 4
           | HC | chr8:32042036-32048035 | 20130731
          Length = 402

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/381 (71%), Positives = 292/381 (76%), Gaps = 4/381 (1%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNNQDRHXXXXXXXXXXXXXXXXR 60
           MLQHQIVQSPARLGL                   QT+++QDRH                R
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSILNPNPQKLPPSQTNHHQDRHSATPSAALISLLPPLPR 60

Query: 61  AQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHX-XXXXXXXXXXXKEI 119
           AQA+L QMASL SKLFEVS NRSVWVTAFRGS+PTFLSSQ Q H             KEI
Sbjct: 61  AQALLSQMASLASKLFEVSPNRSVWVTAFRGSLPTFLSSQTQPHSFSSLESSLPSTTKEI 120

Query: 120 ISLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILV 179
           ISLF+TLQTQI EA++ELQEI+DLQDAK+KID EI SKD ALL  ANKLKD+ER LDILV
Sbjct: 121 ISLFTTLQTQIFEAVSELQEIIDLQDAKKKIDGEIRSKDSALLAFANKLKDAERELDILV 180

Query: 180 DYYSDYRRS-KRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA 238
           D YSDYRRS KR K GDGSEDDSLT+STVSSQLKLSDILSYAHRISYTTFAPPEFGAG A
Sbjct: 181 DDYSDYRRSIKRLKSGDGSEDDSLTTSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGTA 240

Query: 239 PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLAN 298
           PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKT+EAI+EPPP  SVDTNPL N
Sbjct: 241 PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTVEAIIEPPP--SVDTNPLGN 298

Query: 299 LSAIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQ 358
           LSAIQG+LPPNFA+PPGWKPGMPVQLP+                    +DSLPVPRFEEQ
Sbjct: 299 LSAIQGMLPPNFAIPPGWKPGMPVQLPIDMPIKPPPGWKPGDPVALPPIDSLPVPRFEEQ 358

Query: 359 QLHPHIPQPKQPEVIQVQHVN 379
           +L PHIPQP+QPE+IQVQHVN
Sbjct: 359 KLPPHIPQPRQPEIIQVQHVN 379


>Medtr8g075790.2 | vitamin-D-receptor interacting mediator subunit 4
           | HC | chr8:32042036-32048035 | 20130731
          Length = 402

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/381 (71%), Positives = 292/381 (76%), Gaps = 4/381 (1%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNNQDRHXXXXXXXXXXXXXXXXR 60
           MLQHQIVQSPARLGL                   QT+++QDRH                R
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSILNPNPQKLPPSQTNHHQDRHSATPSAALISLLPPLPR 60

Query: 61  AQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHX-XXXXXXXXXXXKEI 119
           AQA+L QMASL SKLFEVS NRSVWVTAFRGS+PTFLSSQ Q H             KEI
Sbjct: 61  AQALLSQMASLASKLFEVSPNRSVWVTAFRGSLPTFLSSQTQPHSFSSLESSLPSTTKEI 120

Query: 120 ISLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILV 179
           ISLF+TLQTQI EA++ELQEI+DLQDAK+KID EI SKD ALL  ANKLKD+ER LDILV
Sbjct: 121 ISLFTTLQTQIFEAVSELQEIIDLQDAKKKIDGEIRSKDSALLAFANKLKDAERELDILV 180

Query: 180 DYYSDYRRS-KRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA 238
           D YSDYRRS KR K GDGSEDDSLT+STVSSQLKLSDILSYAHRISYTTFAPPEFGAG A
Sbjct: 181 DDYSDYRRSIKRLKSGDGSEDDSLTTSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGTA 240

Query: 239 PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLAN 298
           PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKT+EAI+EPPP  SVDTNPL N
Sbjct: 241 PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTVEAIIEPPP--SVDTNPLGN 298

Query: 299 LSAIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQ 358
           LSAIQG+LPPNFA+PPGWKPGMPVQLP+                    +DSLPVPRFEEQ
Sbjct: 299 LSAIQGMLPPNFAIPPGWKPGMPVQLPIDMPIKPPPGWKPGDPVALPPIDSLPVPRFEEQ 358

Query: 359 QLHPHIPQPKQPEVIQVQHVN 379
           +L PHIPQP+QPE+IQVQHVN
Sbjct: 359 KLPPHIPQPRQPEIIQVQHVN 379


>Medtr6g089780.1 | vitamin-D-receptor interacting mediator subunit 4
           | HC | chr6:34079877-34078675 | 20130731
          Length = 400

 Score =  479 bits (1234), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/381 (65%), Positives = 279/381 (73%), Gaps = 5/381 (1%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNN-QDRHXXXXXXXXXXXXXXXX 59
           MLQHQ+VQSPARLGL                   QT N+ QDRH                
Sbjct: 1   MLQHQVVQSPARLGLTNPNSPLIPNPTPPKLPPLQTTNHHQDRHLATPSPALLSLLPPLP 60

Query: 60  RAQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHXXXXXXXXXXXXKEI 119
           RAQA+L QMASL++KLFEVS N+S+WV+AFRGS+PTFLSSQ Q              KEI
Sbjct: 61  RAQALLQQMASLSTKLFEVSPNKSLWVSAFRGSLPTFLSSQGQPRSSASLDSSPSTTKEI 120

Query: 120 ISLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILV 179
           +SLF+ LQTQ+ EA++ELQE+LD +DAKQKID+EICSKD ALL  ANKLKD+ER LDILV
Sbjct: 121 LSLFTNLQTQMFEAVSELQEVLDQKDAKQKIDQEICSKDSALLAFANKLKDAERVLDILV 180

Query: 180 DYYSDYR-RSKRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA 238
           D YSDYR ++KR KLGDGSED SLT+STVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA
Sbjct: 181 DDYSDYRSKTKRLKLGDGSEDVSLTTSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA 240

Query: 239 PLRGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLAN 298
           PLRGA+PPAPQDEQMRASQLYNFADLDIGLPK+ ET EKTIEAI+EPPP Q VD N LAN
Sbjct: 241 PLRGALPPAPQDEQMRASQLYNFADLDIGLPKSAETTEKTIEAIIEPPPLQPVDANSLAN 300

Query: 299 LSAIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQ 358
           L  IQGLLPPNF VP GWKPGMPVQL                      +DSL +PR EEQ
Sbjct: 301 LPGIQGLLPPNFTVPAGWKPGMPVQL---PIDIPIKPPPGWKPGDPVALDSLSIPRIEEQ 357

Query: 359 QLHPHIPQPKQPEVIQVQHVN 379
           QLHPH+PQPK PE+IQV  VN
Sbjct: 358 QLHPHVPQPKLPEIIQVAPVN 378