Miyakogusa Predicted Gene

Lj4g3v1037650.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1037650.2 tr|G7LC44|G7LC44_MEDTR DNA-(Apurinic or
apyrimidinic site) lyase OS=Medicago truncatula
GN=MTR_8g075,78.44,0,DNase
I-like,Endonuclease/exonuclease/phosphatase; SUBFAMILY NOT NAMED,NULL;
AP ENDONUCLEASE,Exodeox,CUFF.48310.2
         (615 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g075810.1 | apurinic/apyrimidinic endonuclease | HC | chr8...  1006   0.0  
Medtr8g075810.2 | apurinic/apyrimidinic endonuclease | HC | chr8...  1006   0.0  
Medtr1g051380.1 | apurinic endonuclease-redox protein | HC | chr...    93   1e-18
Medtr1g051380.2 | apurinic endonuclease-redox protein | HC | chr...    92   1e-18

>Medtr8g075810.1 | apurinic/apyrimidinic endonuclease | HC |
           chr8:32057216-32050015 | 20130731
          Length = 613

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/617 (78%), Positives = 545/617 (88%), Gaps = 6/617 (0%)

Query: 1   MKIVTYNVNGLRQRIAQFGSLRNLLNSFDADIICFQETKLRRQDLTADLVMADGYESFFS 60
           MKIV+YNVNGLRQRI QFGSLRNLLNSFDADI+CFQETKL RQD+TADLVM DGYESFFS
Sbjct: 1   MKIVSYNVNGLRQRITQFGSLRNLLNSFDADILCFQETKLSRQDVTADLVMVDGYESFFS 60

Query: 61  CTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPFSMD- 119
           CTRTS KGRTGYSGVITFCRV+SAFSSNE ALPLAAEEGFTGL+  SQT +  LPF M+ 
Sbjct: 61  CTRTSQKGRTGYSGVITFCRVRSAFSSNEAALPLAAEEGFTGLLCSSQTSEGKLPFFMEE 120

Query: 120 DLEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQKRWE 179
           DLE+FSKDELL+VDSEGRC++TDH HFVLFNIYGPRAGGDD ERIQFK+ FY+ILQKR E
Sbjct: 121 DLEDFSKDELLNVDSEGRCVVTDHGHFVLFNIYGPRAGGDDTERIQFKKTFYRILQKRLE 180

Query: 180 TLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENEGRFSDVFRAKHP 239
           +LLHQGRRIFVVGDLNIAPFA+DRCDAGPDFE NEFRRWF+SMLIEN GRFSDVFRAKHP
Sbjct: 181 SLLHQGRRIFVVGDLNIAPFAVDRCDAGPDFEKNEFRRWFRSMLIENGGRFSDVFRAKHP 240

Query: 240 NKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDCDILTEYK 299
           +K +AYTCW+Q++GAEVFN+GSRIDHILCAGSCLH+SDDL+ HSFI CHV +C+ILT+YK
Sbjct: 241 DKMDAYTCWSQSSGAEVFNYGSRIDHILCAGSCLHKSDDLQSHSFIGCHVKECEILTQYK 300

Query: 300 RCKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLHSTPFLSARYVPMVHGIQQ 359
           R KPESTLS+HRWKGG+SIKLEGSDHAPV  TL+ IPEVSLHSTP LS+RYVPMVHG+QQ
Sbjct: 301 RFKPESTLSSHRWKGGQSIKLEGSDHAPVCATLMGIPEVSLHSTPSLSSRYVPMVHGVQQ 360

Query: 360 TLVSMLVKRRVSEQTKSCEMVNEDISMGSTYESI-EPTNQTDSSTSECHFPSSQDSVCSI 418
           +LVS+L+KRRVSE   SC+M N DI   ST E I EP ++  SST EC    +QDS  SI
Sbjct: 361 SLVSLLMKRRVSE---SCKMANGDILTVSTCERIEEPVDKIGSSTCECDLFPNQDSEGSI 417

Query: 419 LESKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQGSQLSLRSFFQKSTNLDN 478
           L+  ELS GSSQE ++SKSGS YEKS+ +KCNESKKKARN+Q SQLS+RSFFQKST+LDN
Sbjct: 418 LKPNELSAGSSQE-SVSKSGSVYEKSITQKCNESKKKARNSQSSQLSIRSFFQKSTSLDN 476

Query: 479 GVNNSCTDHSNNQAEPSQPDPHLRETSTAIDHSSSPKQCEVNTDACDLDLAELNDSSRKE 538
           GV +SC  +SNN+AEPSQP+  L ET T IDHSS+P Q E+N D C  DLAE+N+SSRKE
Sbjct: 477 GVKDSCISYSNNEAEPSQPNSQLLETCTIIDHSSNPGQDEINADVCGQDLAEINNSSRKE 536

Query: 539 EKSNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVKKQGSNFGRRFYVCARAEGPASNP 598
           EKSNVAS EWQRIQ++MQNSIPLCKGHKE CIARVVKKQG+NFGRRFY CARAEGPASNP
Sbjct: 537 EKSNVASQEWQRIQKLMQNSIPLCKGHKEPCIARVVKKQGANFGRRFYTCARAEGPASNP 596

Query: 599 EANCGYFKWATSKSRNK 615
           EANCGYFKWATSKS+NK
Sbjct: 597 EANCGYFKWATSKSKNK 613


>Medtr8g075810.2 | apurinic/apyrimidinic endonuclease | HC |
           chr8:32057216-32050015 | 20130731
          Length = 613

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/617 (78%), Positives = 545/617 (88%), Gaps = 6/617 (0%)

Query: 1   MKIVTYNVNGLRQRIAQFGSLRNLLNSFDADIICFQETKLRRQDLTADLVMADGYESFFS 60
           MKIV+YNVNGLRQRI QFGSLRNLLNSFDADI+CFQETKL RQD+TADLVM DGYESFFS
Sbjct: 1   MKIVSYNVNGLRQRITQFGSLRNLLNSFDADILCFQETKLSRQDVTADLVMVDGYESFFS 60

Query: 61  CTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPFSMD- 119
           CTRTS KGRTGYSGVITFCRV+SAFSSNE ALPLAAEEGFTGL+  SQT +  LPF M+ 
Sbjct: 61  CTRTSQKGRTGYSGVITFCRVRSAFSSNEAALPLAAEEGFTGLLCSSQTSEGKLPFFMEE 120

Query: 120 DLEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQKRWE 179
           DLE+FSKDELL+VDSEGRC++TDH HFVLFNIYGPRAGGDD ERIQFK+ FY+ILQKR E
Sbjct: 121 DLEDFSKDELLNVDSEGRCVVTDHGHFVLFNIYGPRAGGDDTERIQFKKTFYRILQKRLE 180

Query: 180 TLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENEGRFSDVFRAKHP 239
           +LLHQGRRIFVVGDLNIAPFA+DRCDAGPDFE NEFRRWF+SMLIEN GRFSDVFRAKHP
Sbjct: 181 SLLHQGRRIFVVGDLNIAPFAVDRCDAGPDFEKNEFRRWFRSMLIENGGRFSDVFRAKHP 240

Query: 240 NKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDCDILTEYK 299
           +K +AYTCW+Q++GAEVFN+GSRIDHILCAGSCLH+SDDL+ HSFI CHV +C+ILT+YK
Sbjct: 241 DKMDAYTCWSQSSGAEVFNYGSRIDHILCAGSCLHKSDDLQSHSFIGCHVKECEILTQYK 300

Query: 300 RCKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLHSTPFLSARYVPMVHGIQQ 359
           R KPESTLS+HRWKGG+SIKLEGSDHAPV  TL+ IPEVSLHSTP LS+RYVPMVHG+QQ
Sbjct: 301 RFKPESTLSSHRWKGGQSIKLEGSDHAPVCATLMGIPEVSLHSTPSLSSRYVPMVHGVQQ 360

Query: 360 TLVSMLVKRRVSEQTKSCEMVNEDISMGSTYESI-EPTNQTDSSTSECHFPSSQDSVCSI 418
           +LVS+L+KRRVSE   SC+M N DI   ST E I EP ++  SST EC    +QDS  SI
Sbjct: 361 SLVSLLMKRRVSE---SCKMANGDILTVSTCERIEEPVDKIGSSTCECDLFPNQDSEGSI 417

Query: 419 LESKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQGSQLSLRSFFQKSTNLDN 478
           L+  ELS GSSQE ++SKSGS YEKS+ +KCNESKKKARN+Q SQLS+RSFFQKST+LDN
Sbjct: 418 LKPNELSAGSSQE-SVSKSGSVYEKSITQKCNESKKKARNSQSSQLSIRSFFQKSTSLDN 476

Query: 479 GVNNSCTDHSNNQAEPSQPDPHLRETSTAIDHSSSPKQCEVNTDACDLDLAELNDSSRKE 538
           GV +SC  +SNN+AEPSQP+  L ET T IDHSS+P Q E+N D C  DLAE+N+SSRKE
Sbjct: 477 GVKDSCISYSNNEAEPSQPNSQLLETCTIIDHSSNPGQDEINADVCGQDLAEINNSSRKE 536

Query: 539 EKSNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVKKQGSNFGRRFYVCARAEGPASNP 598
           EKSNVAS EWQRIQ++MQNSIPLCKGHKE CIARVVKKQG+NFGRRFY CARAEGPASNP
Sbjct: 537 EKSNVASQEWQRIQKLMQNSIPLCKGHKEPCIARVVKKQGANFGRRFYTCARAEGPASNP 596

Query: 599 EANCGYFKWATSKSRNK 615
           EANCGYFKWATSKS+NK
Sbjct: 597 EANCGYFKWATSKSKNK 613


>Medtr1g051380.1 | apurinic endonuclease-redox protein | HC |
           chr1:20157964-20150935 | 20130731
          Length = 507

 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 58/301 (19%)

Query: 1   MKIVTYNVNGLRQ--RIAQFGSLRNLLNSFDADIICFQETKLRRQDL-TADLVMADGYE- 56
           +K++++NVNGLR   ++  F +L+ L    D D++C QETKL+ +D+      + DGYE 
Sbjct: 247 VKLLSWNVNGLRALLKLQGFSALQ-LAQREDFDVLCLQETKLQEKDIEEIKQRLIDGYEN 305

Query: 57  SFFSCTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPF 116
           SF++C+ +    + GYSG     R+K          PL+   G    +G S+        
Sbjct: 306 SFWTCSVS----KLGYSGTAIISRIK----------PLSIRYG----LGISEH------- 340

Query: 117 SMDDLEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQK 176
                           DSEGR +  +   F L   Y P + GD  +R+ ++   +     
Sbjct: 341 ----------------DSEGRLVTVEFDTFYLVTGYVPNS-GDGLKRLSYRVTEWDPALS 383

Query: 177 RWETLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEF----RRWFKSMLIENEGRFSD 232
            +   L + + + + GDLN A   ID  +   +  +  F    R+ F++  + N   F D
Sbjct: 384 NYLKELEKSKPVVLTGDLNCAHEEIDIYNPAGNKRSAGFTDEERKSFETNFLSN--GFVD 441

Query: 233 VFRAKHPNKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDC 292
            FR +HP     YT W    G   +N G R+D+ L + S   +  D    S+I   V+  
Sbjct: 442 TFRKQHPGVV-GYTYWGYRHGGRKYNRGWRLDYFLVSESIADKVHD----SYILPDVIGS 496

Query: 293 D 293
           D
Sbjct: 497 D 497


>Medtr1g051380.2 | apurinic endonuclease-redox protein | HC |
           chr1:20157979-20150935 | 20130731
          Length = 542

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 58/301 (19%)

Query: 1   MKIVTYNVNGLRQ--RIAQFGSLRNLLNSFDADIICFQETKLRRQDL-TADLVMADGYE- 56
           +K++++NVNGLR   ++  F +L+ L    D D++C QETKL+ +D+      + DGYE 
Sbjct: 282 VKLLSWNVNGLRALLKLQGFSALQ-LAQREDFDVLCLQETKLQEKDIEEIKQRLIDGYEN 340

Query: 57  SFFSCTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPF 116
           SF++C+ +    + GYSG     R+K          PL+   G    +G S+        
Sbjct: 341 SFWTCSVS----KLGYSGTAIISRIK----------PLSIRYG----LGISEH------- 375

Query: 117 SMDDLEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQK 176
                           DSEGR +  +   F L   Y P + GD  +R+ ++   +     
Sbjct: 376 ----------------DSEGRLVTVEFDTFYLVTGYVPNS-GDGLKRLSYRVTEWDPALS 418

Query: 177 RWETLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEF----RRWFKSMLIENEGRFSD 232
            +   L + + + + GDLN A   ID  +   +  +  F    R+ F++  + N   F D
Sbjct: 419 NYLKELEKSKPVVLTGDLNCAHEEIDIYNPAGNKRSAGFTDEERKSFETNFLSNG--FVD 476

Query: 233 VFRAKHPNKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDC 292
            FR +HP     YT W    G   +N G R+D+ L + S   +  D    S+I   V+  
Sbjct: 477 TFRKQHPGVV-GYTYWGYRHGGRKYNRGWRLDYFLVSESIADKVHD----SYILPDVIGS 531

Query: 293 D 293
           D
Sbjct: 532 D 532