Miyakogusa Predicted Gene

Lj4g3v1024160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1024160.1 Non Characterized Hit- tr|B9FGE5|B9FGE5_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,57.14,2e-18,RNA
recognition motif,RNA recognition motif domain; RNA-binding domain,
RBD,NULL; RRM,RNA recognitio,CUFF.48277.1
         (452 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076100.2 | heterogeneous nuclear ribonucleoprotein | HC |...   175   7e-44
Medtr8g076100.3 | heterogeneous nuclear ribonucleoprotein | HC |...   175   7e-44
Medtr8g076100.1 | heterogeneous nuclear ribonucleoprotein | HC |...   175   9e-44
Medtr8g007390.2 | heterogeneous nuclear ribonucleoprotein | HC |...   104   2e-22
Medtr8g007390.1 | heterogeneous nuclear ribonucleoprotein | HC |...   104   2e-22
Medtr8g007390.3 | heterogeneous nuclear ribonucleoprotein | HC |...   104   2e-22
Medtr8g007390.4 | heterogeneous nuclear ribonucleoprotein | HC |...   104   2e-22
Medtr7g081210.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    97   4e-20
Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    69   9e-12
Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    69   9e-12
Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    69   9e-12
Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein...    68   2e-11
Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    67   5e-11
Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    67   5e-11
Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    67   5e-11
Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    63   5e-10
Medtr7g104800.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    61   2e-09
Medtr7g104800.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    61   2e-09
Medtr7g104800.4 | RNA recognition motif, a.k.a. RRM, RBD protein...    61   2e-09
Medtr7g104800.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    61   2e-09
Medtr4g122650.1 | flowering time control FCA-like protein | HC |...    61   2e-09
Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC | ch...    58   2e-08
Medtr5g064120.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    57   4e-08
Medtr7g105260.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    56   6e-08
Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC | ch...    56   8e-08
Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   1e-07
Medtr3g116130.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   2e-07
Medtr3g102040.1 | polyadenylate-binding protein | HC | chr3:4701...    54   2e-07
Medtr3g116130.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr6g477870.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    54   4e-07
Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   5e-07
Medtr6g477870.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    53   5e-07
Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   5e-07
Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   5e-07
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341...    53   7e-07
Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   1e-06
Medtr4g081520.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   1e-06
Medtr4g081510.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   1e-06
Medtr1g097280.1 | cleavage stimulating factor, putative | HC | c...    52   2e-06
Medtr8g092550.1 | CC1-like splicing factor | HC | chr8:38688579-...    51   2e-06
Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    51   2e-06
Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC | ch...    51   2e-06
Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC | ch...    50   3e-06
Medtr7g117495.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    50   3e-06
Medtr7g082150.1 | U1 small nuclear ribonucleoprotein | LC | chr7...    50   3e-06
Medtr7g117495.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    50   4e-06
Medtr4g063560.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    50   5e-06
Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    50   5e-06
Medtr3g095230.1 | CC1-like splicing factor | LC | chr3:43513030-...    50   6e-06
Medtr3g095230.2 | CC1-like splicing factor | LC | chr3:43513031-...    50   6e-06
Medtr3g095230.3 | CC1-like splicing factor | LC | chr3:43513031-...    50   6e-06

>Medtr8g076100.2 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:32212286-32219222 | 20130731
          Length = 941

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 111/166 (66%), Gaps = 16/166 (9%)

Query: 289 IFGQEEHSNADSKVEVKVQLQKDVISENYGGEGPKSGEMLDSGEQGXXXXXXXXXXXXXX 348
           I G EEHS+    VEV+ QLQKDV  +NYG E  KSGE +D GEQ               
Sbjct: 323 IIGHEEHSS----VEVQAQLQKDVDLKNYGVERAKSGESIDLGEQERVQLEDEDPEEDPE 378

Query: 349 XXXXXXXXXXG------------HMQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVF 396
                                  HM+ EA+AKQR+I+KEHEIFVGGLDRD TEEDL+K+F
Sbjct: 379 EDPEEDPEELPEDTETLDEEHDEHMEFEAIAKQRRIRKEHEIFVGGLDRDTTEEDLKKIF 438

Query: 397 QRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEMKNPVV 442
           QRIGEV+EVRLHKNSST+KN+GYA V+FANKEHAKKALSEMKNPV+
Sbjct: 439 QRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSEMKNPVI 484



 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 97/214 (45%), Gaps = 27/214 (12%)

Query: 1   MRTRNADSAXXXXXXXXXXXXXXXXXXXXVESPAAKRTPPASRTRSAKKTEASPTPDPVS 60
           MRTRNADS+                     ESPAAKRTPP S+ ++AKKTEASP  DP  
Sbjct: 1   MRTRNADSSSKSTTPKKTPPARKSAG----ESPAAKRTPP-SKPKNAKKTEASPATDP-- 53

Query: 61  DSNPNQTRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNXXXXXXXXXXXTSVVGNVE 120
               +Q++ +                            TPN                 +E
Sbjct: 54  ----DQSQ-KKKLLASATTAKSGKWKSPGKPRTKVVAVTPNLEE-------------KLE 95

Query: 121 AEADVTPVVDNAEAAEGGQGLG--SVELSDEKGQKSMEVDEPFLEKDGELAEMGRSVMEV 178
            EAD T V+D  E       +   ++E   E  QK MEVD+P +EK  EL E G+S +EV
Sbjct: 96  VEADETTVIDKVEEVGNVNDIDADTMECEKEGEQKPMEVDQPVVEKVCELVEKGKSTVEV 155

Query: 179 DIAASGDASVDFKQPEHAIVDLNISTVDNEDSTG 212
           +   S D S+  KQP   +VDLNIS  DNED TG
Sbjct: 156 EPIFSQDGSISLKQPGCTLVDLNISAADNEDYTG 189


>Medtr8g076100.3 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:32212286-32219222 | 20130731
          Length = 941

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 111/166 (66%), Gaps = 16/166 (9%)

Query: 289 IFGQEEHSNADSKVEVKVQLQKDVISENYGGEGPKSGEMLDSGEQGXXXXXXXXXXXXXX 348
           I G EEHS+    VEV+ QLQKDV  +NYG E  KSGE +D GEQ               
Sbjct: 323 IIGHEEHSS----VEVQAQLQKDVDLKNYGVERAKSGESIDLGEQERVQLEDEDPEEDPE 378

Query: 349 XXXXXXXXXXG------------HMQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVF 396
                                  HM+ EA+AKQR+I+KEHEIFVGGLDRD TEEDL+K+F
Sbjct: 379 EDPEEDPEELPEDTETLDEEHDEHMEFEAIAKQRRIRKEHEIFVGGLDRDTTEEDLKKIF 438

Query: 397 QRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEMKNPVV 442
           QRIGEV+EVRLHKNSST+KN+GYA V+FANKEHAKKALSEMKNPV+
Sbjct: 439 QRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSEMKNPVI 484



 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 97/214 (45%), Gaps = 27/214 (12%)

Query: 1   MRTRNADSAXXXXXXXXXXXXXXXXXXXXVESPAAKRTPPASRTRSAKKTEASPTPDPVS 60
           MRTRNADS+                     ESPAAKRTPP S+ ++AKKTEASP  DP  
Sbjct: 1   MRTRNADSSSKSTTPKKTPPARKSAG----ESPAAKRTPP-SKPKNAKKTEASPATDP-- 53

Query: 61  DSNPNQTRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNXXXXXXXXXXXTSVVGNVE 120
               +Q++ +                            TPN                 +E
Sbjct: 54  ----DQSQ-KKKLLASATTAKSGKWKSPGKPRTKVVAVTPNLEE-------------KLE 95

Query: 121 AEADVTPVVDNAEAAEGGQGLG--SVELSDEKGQKSMEVDEPFLEKDGELAEMGRSVMEV 178
            EAD T V+D  E       +   ++E   E  QK MEVD+P +EK  EL E G+S +EV
Sbjct: 96  VEADETTVIDKVEEVGNVNDIDADTMECEKEGEQKPMEVDQPVVEKVCELVEKGKSTVEV 155

Query: 179 DIAASGDASVDFKQPEHAIVDLNISTVDNEDSTG 212
           +   S D S+  KQP   +VDLNIS  DNED TG
Sbjct: 156 EPIFSQDGSISLKQPGCTLVDLNISAADNEDYTG 189


>Medtr8g076100.1 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:32212286-32219222 | 20130731
          Length = 989

 Score =  175 bits (443), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 111/166 (66%), Gaps = 16/166 (9%)

Query: 289 IFGQEEHSNADSKVEVKVQLQKDVISENYGGEGPKSGEMLDSGEQGXXXXXXXXXXXXXX 348
           I G EEHS+    VEV+ QLQKDV  +NYG E  KSGE +D GEQ               
Sbjct: 323 IIGHEEHSS----VEVQAQLQKDVDLKNYGVERAKSGESIDLGEQERVQLEDEDPEEDPE 378

Query: 349 XXXXXXXXXXG------------HMQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVF 396
                                  HM+ EA+AKQR+I+KEHEIFVGGLDRD TEEDL+K+F
Sbjct: 379 EDPEEDPEELPEDTETLDEEHDEHMEFEAIAKQRRIRKEHEIFVGGLDRDTTEEDLKKIF 438

Query: 397 QRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEMKNPVV 442
           QRIGEV+EVRLHKNSST+KN+GYA V+FANKEHAKKALSEMKNPV+
Sbjct: 439 QRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSEMKNPVI 484



 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 97/214 (45%), Gaps = 27/214 (12%)

Query: 1   MRTRNADSAXXXXXXXXXXXXXXXXXXXXVESPAAKRTPPASRTRSAKKTEASPTPDPVS 60
           MRTRNADS+                     ESPAAKRTPP S+ ++AKKTEASP  DP  
Sbjct: 1   MRTRNADSSSKSTTPKKTPPARKSAG----ESPAAKRTPP-SKPKNAKKTEASPATDP-- 53

Query: 61  DSNPNQTRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNXXXXXXXXXXXTSVVGNVE 120
               +Q++ +                            TPN                 +E
Sbjct: 54  ----DQSQ-KKKLLASATTAKSGKWKSPGKPRTKVVAVTPNLEE-------------KLE 95

Query: 121 AEADVTPVVDNAEAAEGGQGLG--SVELSDEKGQKSMEVDEPFLEKDGELAEMGRSVMEV 178
            EAD T V+D  E       +   ++E   E  QK MEVD+P +EK  EL E G+S +EV
Sbjct: 96  VEADETTVIDKVEEVGNVNDIDADTMECEKEGEQKPMEVDQPVVEKVCELVEKGKSTVEV 155

Query: 179 DIAASGDASVDFKQPEHAIVDLNISTVDNEDSTG 212
           +   S D S+  KQP   +VDLNIS  DNED TG
Sbjct: 156 EPIFSQDGSISLKQPGCTLVDLNISAADNEDYTG 189


>Medtr8g007390.2 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:1510737-1506382 | 20130731
          Length = 800

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 62/77 (80%)

Query: 366 LAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFA 425
           + K+R+ +KE E+FVGGLD+DATE+DLRKVF  +G V EVRL  N  T KNKG+AF++F 
Sbjct: 205 VVKERRKRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFE 264

Query: 426 NKEHAKKALSEMKNPVV 442
           N E AK+A++E+KNPV+
Sbjct: 265 NVEQAKRAVAELKNPVI 281


>Medtr8g007390.1 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:1510737-1506382 | 20130731
          Length = 800

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 62/77 (80%)

Query: 366 LAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFA 425
           + K+R+ +KE E+FVGGLD+DATE+DLRKVF  +G V EVRL  N  T KNKG+AF++F 
Sbjct: 205 VVKERRKRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFE 264

Query: 426 NKEHAKKALSEMKNPVV 442
           N E AK+A++E+KNPV+
Sbjct: 265 NVEQAKRAVAELKNPVI 281


>Medtr8g007390.3 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:1510737-1506382 | 20130731
          Length = 799

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 62/77 (80%)

Query: 366 LAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFA 425
           + K+R+ +KE E+FVGGLD+DATE+DLRKVF  +G V EVRL  N  T KNKG+AF++F 
Sbjct: 204 VVKERRKRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFE 263

Query: 426 NKEHAKKALSEMKNPVV 442
           N E AK+A++E+KNPV+
Sbjct: 264 NVEQAKRAVAELKNPVI 280


>Medtr8g007390.4 | heterogeneous nuclear ribonucleoprotein | HC |
           chr8:1510737-1506382 | 20130731
          Length = 799

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 62/77 (80%)

Query: 366 LAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFA 425
           + K+R+ +KE E+FVGGLD+DATE+DLRKVF  +G V EVRL  N  T KNKG+AF++F 
Sbjct: 204 VVKERRKRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFE 263

Query: 426 NKEHAKKALSEMKNPVV 442
           N E AK+A++E+KNPV+
Sbjct: 264 NVEQAKRAVAELKNPVI 280


>Medtr7g081210.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:30979896-30974591 | 20130731
          Length = 782

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 63/81 (77%), Gaps = 1/81 (1%)

Query: 362 QLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAF 421
           Q+E + + +K +KE E+FVGGLD++ATE DLRKVF ++GE+ EVR+  N  T +NKG+A 
Sbjct: 181 QVEVIKETQK-QKELEVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFAL 239

Query: 422 VKFANKEHAKKALSEMKNPVV 442
           ++F   EH K+AL+E+KNPV+
Sbjct: 240 LRFETVEHVKRALAELKNPVI 260


>Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E++VGG+  DA  EDL++  +RIGEVV+VR+ K    ++NKG+AFV + N E A KA+ E
Sbjct: 111 EVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEE 170

Query: 437 MKNPVVCFSSFDCS 450
           + N         CS
Sbjct: 171 LNNTEFKGRKIKCS 184


>Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E++VGG+  DA  EDL++  +RIGEVV+VR+ K    ++NKG+AFV + N E A KA+ E
Sbjct: 111 EVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEE 170

Query: 437 MKNPVVCFSSFDCS 450
           + N         CS
Sbjct: 171 LNNTEFKGRKIKCS 184


>Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E++VGG+  DA  EDL++  +RIGEVV+VR+ K    ++NKG+AFV + N E A KA+ E
Sbjct: 111 EVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEE 170

Query: 437 MKNPVVCFSSFDCS 450
           + N         CS
Sbjct: 171 LNNTEFKGRKIKCS 184


>Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 354

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E++VGG+  DA  EDL++  +RIGEVV+VR+ K    ++NKG+AFV + N E A KA+ E
Sbjct: 111 EVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEE 170

Query: 437 MKNPVVCFSSFDCS 450
           + N         CS
Sbjct: 171 LNNTEFKGRKIKCS 184


>Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025533-49031900 | 20130731
          Length = 479

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 51/73 (69%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+F+GGL RD +++D+R++ + +G++VE++L K+  T ++KGYAFV +  KE A+KA+ +
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 437 MKNPVVCFSSFDC 449
           + N      +  C
Sbjct: 165 IHNKEFKGKTLRC 177


>Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025533-49031887 | 20130731
          Length = 479

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 51/73 (69%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+F+GGL RD +++D+R++ + +G++VE++L K+  T ++KGYAFV +  KE A+KA+ +
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 437 MKNPVVCFSSFDC 449
           + N      +  C
Sbjct: 165 IHNKEFKGKTLRC 177


>Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025861-49031887 | 20130731
          Length = 479

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 51/73 (69%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+F+GGL RD +++D+R++ + +G++VE++L K+  T ++KGYAFV +  KE A+KA+ +
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 437 MKNPVVCFSSFDC 449
           + N      +  C
Sbjct: 165 IHNKEFKGKTLRC 177


>Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr7:2533493-2542856 | 20130731
          Length = 752

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 360 HMQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGY 419
           H +L +L   +      E++VGG+  DA  EDL++  + IGEVV+VR+ K    ++N+G+
Sbjct: 339 HAELLSLPHHKS-----EVYVGGIPLDAKTEDLKEFCECIGEVVQVRIFKGKDASENRGF 393

Query: 420 AFVKFANKEHAKKALSEMKNPVVCFSSFDCS 450
           AFV + + E A KA+ E+ N         CS
Sbjct: 394 AFVTYRSIELASKAIKELNNTEFKAGKIKCS 424


>Medtr7g104800.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:42489150-42483010 | 20130731
          Length = 477

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+++GG+  + +E+DLR   Q +GEV EVR+ K       KGYAFV F  KE A KAL E
Sbjct: 102 EVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKE 158

Query: 437 MKN 439
           + N
Sbjct: 159 LNN 161


>Medtr7g104800.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:42489150-42483010 | 20130731
          Length = 477

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+++GG+  + +E+DLR   Q +GEV EVR+ K       KGYAFV F  KE A KAL E
Sbjct: 102 EVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKE 158

Query: 437 MKN 439
           + N
Sbjct: 159 LNN 161


>Medtr7g104800.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:42488464-42483010 | 20130731
          Length = 477

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+++GG+  + +E+DLR   Q +GEV EVR+ K       KGYAFV F  KE A KAL E
Sbjct: 102 EVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKE 158

Query: 437 MKN 439
           + N
Sbjct: 159 LNN 161


>Medtr7g104800.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:42489150-42483010 | 20130731
          Length = 477

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           E+++GG+  + +E+DLR   Q +GEV EVR+ K       KGYAFV F  KE A KAL E
Sbjct: 102 EVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKE 158

Query: 437 MKN 439
           + N
Sbjct: 159 LNN 161


>Medtr4g122650.1 | flowering time control FCA-like protein | HC |
           chr4:50587410-50576809 | 20130731
          Length = 737

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 42/63 (66%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVG + R ATEED+R +F+  G VVEV L K+  T +++G  F+K+A  E A +A+  
Sbjct: 89  KLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRA 148

Query: 437 MKN 439
           + N
Sbjct: 149 LHN 151


>Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC |
           chr3:46662442-46658399 | 20130731
          Length = 420

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 6/65 (9%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           IFVGGLD  AT EDLR+ F + GE+V V++         KG  FV+FAN+ +A++AL ++
Sbjct: 294 IFVGGLDPSATAEDLRQPFSQYGEIVSVKI------PVGKGCGFVQFANRNNAEEALQKL 347

Query: 438 KNPVV 442
               V
Sbjct: 348 NGTTV 352


>Medtr5g064120.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:26612934-26618708 | 20130731
          Length = 283

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVGGL  +   +++R  F++ G+++E  +  + +T K+KGY FV F + E A++A ++
Sbjct: 17  KVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACAD 76

Query: 437 MKNPVV 442
             NPV+
Sbjct: 77  -PNPVI 81


>Medtr7g105260.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:42674424-42676547 | 20130731
          Length = 140

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 366 LAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFA 425
           L  +R I    ++FVGGL    TE+ L   F   G+VVE ++  +  + K+KGY FV FA
Sbjct: 24  LTFRRAI--AFKLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFA 81

Query: 426 NKEHAKKALSEM 437
           +++ A+KA++EM
Sbjct: 82  SQDEAEKAITEM 93


>Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC |
           chr1:6171590-6176327 | 20130731
          Length = 425

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 6/65 (9%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           IFVGGLD + T+EDL++ F + GE+  V++         KG  FV+FAN+ +A++AL ++
Sbjct: 297 IFVGGLDSNVTDEDLKQTFSQYGEIASVKI------PVGKGCGFVQFANRNNAEEALQKL 350

Query: 438 KNPVV 442
              ++
Sbjct: 351 NGTMI 355


>Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein,
           putative | HC | chr1:41816599-41813158 | 20130731
          Length = 284

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%)

Query: 367 AKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFAN 426
           A Q    K  ++FV GL    +E+ LR  F+  GE+VEV++  +  + ++KGYAF+++  
Sbjct: 183 ASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTT 242

Query: 427 KEHAKKALSEMKNPVV 442
           +E A  AL EM   ++
Sbjct: 243 EEAASAALKEMNGKII 258


>Medtr3g116130.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:54301450-54296178 | 20130731
          Length = 281

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVGGL  +   E +R+ F++ G+++E  +  + +T ++KGY FV F + E A++A ++
Sbjct: 30  KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACAD 89

Query: 437 MKNPVV 442
             +PV+
Sbjct: 90  -PSPVI 94


>Medtr3g102040.1 | polyadenylate-binding protein | HC |
           chr3:47012095-47003272 | 20130731
          Length = 622

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 38/57 (66%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           ++VG LD D T+  L  +F +IG+VV VR+ ++ ++ ++ GY +V F+N   A KA+
Sbjct: 26  LYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAM 82


>Medtr3g116130.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:54300708-54296502 | 20130731
          Length = 372

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVGGL  +   E +R+ F++ G+++E  +  + +T ++KGY FV F + E A++A ++
Sbjct: 30  KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACAD 89

Query: 437 MKNPVV 442
             +PV+
Sbjct: 90  -PSPVI 94


>Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465398-9461370 | 20130731
          Length = 481

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++F+GG+  D  E+ LR+ FQ  G+VVE  + K+ +T + +G+ FV FA+   A++ + E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64


>Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465402-9461271 | 20130731
          Length = 481

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++F+GG+  D  E+ LR+ FQ  G+VVE  + K+ +T + +G+ FV FA+   A++ + E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64


>Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465359-9461307 | 20130731
          Length = 481

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++F+GG+  D  E+ LR+ FQ  G+VVE  + K+ +T + +G+ FV FA+   A++ + E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64


>Medtr6g477870.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr6:28646362-28643393 | 20130731
          Length = 169

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
            ++V GL    TEE LR  F+  G++V+V L  +   N+ +G+AF+++A +E +KKA+  
Sbjct: 96  RLYVSGLSFRTTEESLRNAFKNFGQLVDVNLVMDKVANRPRGFAFLRYATEEESKKAIEG 155

Query: 437 M 437
           M
Sbjct: 156 M 156


>Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:17072567-17075712 | 20130731
          Length = 285

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           E+++FVG L    T E L + FQ  G VV  R+  +  T K++GY FV +A K     AL
Sbjct: 203 EYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTAL 262

Query: 435 SEMKN 439
           + M N
Sbjct: 263 AIMDN 267


>Medtr6g477870.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr6:28646362-28643393 | 20130731
          Length = 183

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
            ++V GL    TEE LR  F+  G++V+V L  +   N+ +G+AF+++A +E +KKA+  
Sbjct: 96  RLYVSGLSFRTTEESLRNAFKNFGQLVDVNLVMDKVANRPRGFAFLRYATEEESKKAIEG 155

Query: 437 M 437
           M
Sbjct: 156 M 156


>Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986546-3983001 | 20130731
          Length = 253

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%)

Query: 361 MQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYA 420
           M   +L +  +     ++F+GG+     E  LR+ F R G+V++ ++  +  T +++G+ 
Sbjct: 25  MSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFG 84

Query: 421 FVKFANKEHAKKALSEMKN 439
           F+ FA  E A  AL  M N
Sbjct: 85  FITFATSEEASSALQAMDN 103


>Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986488-3983001 | 20130731
          Length = 253

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%)

Query: 361 MQLEALAKQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYA 420
           M   +L +  +     ++F+GG+     E  LR+ F R G+V++ ++  +  T +++G+ 
Sbjct: 25  MSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFG 84

Query: 421 FVKFANKEHAKKALSEMKN 439
           F+ FA  E A  AL  M N
Sbjct: 85  FITFATSEEASSALQAMDN 103


>Medtr4g085540.1 | polyadenylate-binding protein | HC |
           chr4:33416965-33423437 | 20130731
          Length = 654

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 39/57 (68%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           ++VG LD + T+  L  +F ++G+VV VR+ ++ +T ++ GY +V ++N + A +AL
Sbjct: 36  LYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARAL 92


>Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr6:438661-434987 | 20130731
          Length = 383

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           +IFVGG+  + TE++ R  F R GEV + ++ ++ STN+++G+ FV F  +E     LS 
Sbjct: 134 KIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFVTFDTEEAVDDLLS- 192

Query: 437 MKNPV 441
           M N +
Sbjct: 193 MGNKI 197


>Medtr4g081520.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr4:31628430-31625444 | 20130731
          Length = 144

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           +FV GL +  T E LR+ FQ+ GEVV  R+  +  +  +KG+ FVK+A  E A K +  M
Sbjct: 53  LFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGM 112


>Medtr4g081510.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           LC | chr4:31623161-31620622 | 20130731
          Length = 185

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 38/60 (63%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           +FV GL++  T E LR+ F++ GEV +VR+  +  +  +KG+ +V++A  E A K +  M
Sbjct: 46  VFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGIQGM 105


>Medtr1g097280.1 | cleavage stimulating factor, putative | HC |
           chr1:43879642-43873268 | 20130731
          Length = 572

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKA 433
           +FVG +  DATEE L+++ + +G V+  RL  +  T K KGY F ++ ++E A  A
Sbjct: 31  VFVGNIPYDATEEQLKEICREVGPVISFRLVTDRETGKPKGYGFCEYTDEETALSA 86


>Medtr8g092550.1 | CC1-like splicing factor | HC |
           chr8:38688579-38694751 | 20130731
          Length = 567

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           + +++VG L  + TE +LR++F+  G++  V+L  +  T   KG+ FV+FA+ EHAK A 
Sbjct: 302 DRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQ 361

Query: 435 S 435
           S
Sbjct: 362 S 362


>Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:37961794-37963766 | 20130731
          Length = 105

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALS 435
           ++F+GGL  +  ++ LR  F   G+VVE R+  +  T +++G+ FV F ++E A  ALS
Sbjct: 37  KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS 95


>Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC |
           chr4:33938062-33942519 | 20130731
          Length = 454

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 6/65 (9%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           IFVGGLD D ++EDLR+ F + G+V+ V++         KG  FV+ A++++A++A+  +
Sbjct: 336 IFVGGLDSDISDEDLRQPFLQFGDVISVKIP------VGKGCGFVQLADRKNAEEAIQGL 389

Query: 438 KNPVV 442
              V+
Sbjct: 390 NGTVI 394


>Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC |
           chr2:41853094-41847353 | 20130731
          Length = 428

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQ-RIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKA 433
           +H IFVG L  D T+  L++ F+   G V   ++  + +T ++KGY FVKF+++    +A
Sbjct: 107 DHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRA 166

Query: 434 LSEMKNPVVC 443
           +SEM N V C
Sbjct: 167 MSEM-NGVYC 175


>Medtr7g117495.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:48649576-48651271 | 20130731
          Length = 253

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVGGL  +  ++ LR+ F++ G+++E  +  +  T ++KGY FV F + + AKKA  E
Sbjct: 19  KVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKACEE 78


>Medtr7g082150.1 | U1 small nuclear ribonucleoprotein | LC |
           chr7:31471924-31467830 | 20130731
          Length = 566

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query: 378 IFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSEM 437
           +FVG L R  TEE LRKV    G+V  +RL ++  T  ++GYAFV+F  +   ++A  + 
Sbjct: 65  LFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRAYMDA 124

Query: 438 KNPVV 442
            + +V
Sbjct: 125 HHLIV 129


>Medtr7g117495.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:48649613-48651189 | 20130731
          Length = 256

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++FVGGL  +  ++ LR+ F++ G+++E  +  +  T ++KGY FV F + + AKKA  E
Sbjct: 19  KVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKACEE 78


>Medtr4g063560.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:23466507-23467712 | 20130731
          Length = 112

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALSE 436
           ++F+ GL  +  E  LR  F++ G+++EV++  N  T ++KGY FV+F ++  A  A  E
Sbjct: 34  KLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATARKE 93

Query: 437 MKNPVV 442
           +   +V
Sbjct: 94  LHGQIV 99


>Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:37961723-37963823 | 20130731
          Length = 146

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 377 EIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKALS 435
           ++F+GGL  +  ++ LR  F   G+VVE R+  +  T +++G+ FV F ++E A  ALS
Sbjct: 37  KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS 95


>Medtr3g095230.1 | CC1-like splicing factor | LC |
           chr3:43513030-43521003 | 20130731
          Length = 587

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           + +++VG L  + TE  LR++F+  G V  V+L  +  T   KG+ F++FA+ EHAK A 
Sbjct: 316 DRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQ 375

Query: 435 S 435
           S
Sbjct: 376 S 376


>Medtr3g095230.2 | CC1-like splicing factor | LC |
           chr3:43513031-43520987 | 20130731
          Length = 576

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           + +++VG L  + TE  LR++F+  G V  V+L  +  T   KG+ F++FA+ EHAK A 
Sbjct: 316 DRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQ 375

Query: 435 S 435
           S
Sbjct: 376 S 376


>Medtr3g095230.3 | CC1-like splicing factor | LC |
           chr3:43513031-43520279 | 20130731
          Length = 576

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 375 EHEIFVGGLDRDATEEDLRKVFQRIGEVVEVRLHKNSSTNKNKGYAFVKFANKEHAKKAL 434
           + +++VG L  + TE  LR++F+  G V  V+L  +  T   KG+ F++FA+ EHAK A 
Sbjct: 316 DRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQ 375

Query: 435 S 435
           S
Sbjct: 376 S 376