Miyakogusa Predicted Gene
- Lj4g3v0998960.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0998960.4 Non Characterized Hit- tr|J3LZW8|J3LZW8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,39.02,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.48259.4
(153 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g010440.4 | LRR receptor-like kinase | HC | chr5:2795453-2... 245 1e-65
Medtr5g010440.5 | LRR receptor-like kinase | HC | chr5:2795453-2... 245 1e-65
Medtr5g010440.1 | LRR receptor-like kinase | HC | chr5:2795453-2... 244 2e-65
Medtr5g010440.3 | LRR receptor-like kinase | HC | chr5:2795453-2... 244 2e-65
Medtr5g010440.2 | LRR receptor-like kinase | HC | chr5:2795453-2... 244 2e-65
Medtr8g098510.4 | LRR receptor-like kinase family protein | HC |... 228 1e-60
Medtr8g098510.1 | LRR receptor-like kinase family protein | HC |... 228 1e-60
Medtr8g098510.2 | LRR receptor-like kinase family protein | HC |... 228 1e-60
Medtr8g098510.3 | LRR receptor-like kinase family protein | HC |... 228 2e-60
Medtr1g084790.1 | LRR receptor-like kinase | HC | chr1:37750328-... 67 7e-12
Medtr3g465470.1 | tyrosine kinase family protein | HC | chr3:264... 63 1e-10
Medtr3g071480.1 | LRR receptor-like kinase | HC | chr3:32070026-... 61 4e-10
Medtr8g086390.2 | LRR receptor-like kinase | HC | chr8:35836039-... 59 2e-09
Medtr8g086390.1 | LRR receptor-like kinase | HC | chr8:35836670-... 59 2e-09
Medtr2g016360.1 | LRR receptor-like kinase | HC | chr2:4988709-4... 58 4e-09
Medtr2g016320.1 | LRR receptor-like kinase | HC | chr2:4970800-4... 58 4e-09
>Medtr5g010440.4 | LRR receptor-like kinase | HC |
chr5:2795453-2791526 | 20130731
Length = 528
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 2 QCAGASPAKSQPVVNPN-HQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAF 60
QC GASPAKSQPVV+ HQ H+ KHHG S+P+WLLA+EIV GTMVGS+ L+A+LAAF
Sbjct: 256 QCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAF 315
Query: 61 QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
QRCN KS+I+IPWKKSASQK H VYIDPE+LKDVRRYSRQ+LE ACEDFSNIIGSSPDS
Sbjct: 316 QRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDS 375
Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGW 148
VVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 376 VVYKGTMKGGPEIAVISLCIKEEHWTGY 403
>Medtr5g010440.5 | LRR receptor-like kinase | HC |
chr5:2795453-2791526 | 20130731
Length = 528
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 2 QCAGASPAKSQPVVNPN-HQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAF 60
QC GASPAKSQPVV+ HQ H+ KHHG S+P+WLLA+EIV GTMVGS+ L+A+LAAF
Sbjct: 256 QCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAF 315
Query: 61 QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
QRCN KS+I+IPWKKSASQK H VYIDPE+LKDVRRYSRQ+LE ACEDFSNIIGSSPDS
Sbjct: 316 QRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDS 375
Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGW 148
VVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 376 VVYKGTMKGGPEIAVISLCIKEEHWTGY 403
>Medtr5g010440.1 | LRR receptor-like kinase | HC |
chr5:2795453-2791526 | 20130731
Length = 661
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 2 QCAGASPAKSQPVVNPN-HQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAF 60
QC GASPAKSQPVV+ HQ H+ KHHG S+P+WLLA+EIV GTMVGS+ L+A+LAAF
Sbjct: 256 QCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAF 315
Query: 61 QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
QRCN KS+I+IPWKKSASQK H VYIDPE+LKDVRRYSRQ+LE ACEDFSNIIGSSPDS
Sbjct: 316 QRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDS 375
Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGW 148
VVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 376 VVYKGTMKGGPEIAVISLCIKEEHWTGY 403
>Medtr5g010440.3 | LRR receptor-like kinase | HC |
chr5:2795453-2791526 | 20130731
Length = 591
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 2 QCAGASPAKSQPVVNPN-HQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAF 60
QC GASPAKSQPVV+ HQ H+ KHHG S+P+WLLA+EIV GTMVGS+ L+A+LAAF
Sbjct: 256 QCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAF 315
Query: 61 QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
QRCN KS+I+IPWKKSASQK H VYIDPE+LKDVRRYSRQ+LE ACEDFSNIIGSSPDS
Sbjct: 316 QRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDS 375
Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGW 148
VVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 376 VVYKGTMKGGPEIAVISLCIKEEHWTGY 403
>Medtr5g010440.2 | LRR receptor-like kinase | HC |
chr5:2795453-2791526 | 20130731
Length = 465
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Query: 2 QCAGASPAKSQPVVNPN-HQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAF 60
QC GASPAKSQPVV+ HQ H+ KHHG S+P+WLLA+EIV GTMVGS+ L+A+LAAF
Sbjct: 60 QCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAGTMVGSVCLIAILAAF 119
Query: 61 QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
QRCN KS+I+IPWKKSASQK H VYIDPE+LKDVRRYSRQ+LE ACEDFSNIIGSSPDS
Sbjct: 120 QRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEEACEDFSNIIGSSPDS 179
Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGW 148
VVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 180 VVYKGTMKGGPEIAVISLCIKEEHWTGY 207
>Medtr8g098510.4 | LRR receptor-like kinase family protein | HC |
chr8:40848219-40852055 | 20130731
Length = 592
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 1 MQCAGASPAKSQPVVNPNH-QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
+QCAGASPA+ PVV P H EH KH G SKP+WLLA+EI GTMVGSLFL+ + A
Sbjct: 254 VQCAGASPAQGHPVVKPKHLSKAEHESKHEGGSKPAWLLALEIATGTMVGSLFLIGIFTA 313
Query: 60 FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
QR N KS+I+IPWKKS+S+K+ ++VYID EMLK+V RYSRQ+LEVACEDFSNIIGSSPD
Sbjct: 314 IQRFNNKSSIIIPWKKSSSEKEQISVYIDSEMLKNVTRYSRQELEVACEDFSNIIGSSPD 373
Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTG 147
SVVYKGTMKGGPEI ISLCI+EE WTG
Sbjct: 374 SVVYKGTMKGGPEIAAISLCIKEENWTG 401
>Medtr8g098510.1 | LRR receptor-like kinase family protein | HC |
chr8:40848193-40852856 | 20130731
Length = 658
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 1 MQCAGASPAKSQPVVNPNH-QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
+QCAGASPA+ PVV P H EH KH G SKP+WLLA+EI GTMVGSLFL+ + A
Sbjct: 254 VQCAGASPAQGHPVVKPKHLSKAEHESKHEGGSKPAWLLALEIATGTMVGSLFLIGIFTA 313
Query: 60 FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
QR N KS+I+IPWKKS+S+K+ ++VYID EMLK+V RYSRQ+LEVACEDFSNIIGSSPD
Sbjct: 314 IQRFNNKSSIIIPWKKSSSEKEQISVYIDSEMLKNVTRYSRQELEVACEDFSNIIGSSPD 373
Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTG 147
SVVYKGTMKGGPEI ISLCI+EE WTG
Sbjct: 374 SVVYKGTMKGGPEIAAISLCIKEENWTG 401
>Medtr8g098510.2 | LRR receptor-like kinase family protein | HC |
chr8:40848193-40852856 | 20130731
Length = 521
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 1 MQCAGASPAKSQPVVNPNH-QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
+QCAGASPA+ PVV P H EH KH G SKP+WLLA+EI GTMVGSLFL+ + A
Sbjct: 254 VQCAGASPAQGHPVVKPKHLSKAEHESKHEGGSKPAWLLALEIATGTMVGSLFLIGIFTA 313
Query: 60 FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
QR N KS+I+IPWKKS+S+K+ ++VYID EMLK+V RYSRQ+LEVACEDFSNIIGSSPD
Sbjct: 314 IQRFNNKSSIIIPWKKSSSEKEQISVYIDSEMLKNVTRYSRQELEVACEDFSNIIGSSPD 373
Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTG 147
SVVYKGTMKGGPEI ISLCI+EE WTG
Sbjct: 374 SVVYKGTMKGGPEIAAISLCIKEENWTG 401
>Medtr8g098510.3 | LRR receptor-like kinase family protein | HC |
chr8:40848276-40852856 | 20130731
Length = 636
Score = 228 bits (580), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 1 MQCAGASPAKSQPVVNPNH-QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
+QCAGASPA+ PVV P H EH KH G SKP+WLLA+EI GTMVGSLFL+ + A
Sbjct: 232 VQCAGASPAQGHPVVKPKHLSKAEHESKHEGGSKPAWLLALEIATGTMVGSLFLIGIFTA 291
Query: 60 FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
QR N KS+I+IPWKKS+S+K+ ++VYID EMLK+V RYSRQ+LEVACEDFSNIIGSSPD
Sbjct: 292 IQRFNNKSSIIIPWKKSSSEKEQISVYIDSEMLKNVTRYSRQELEVACEDFSNIIGSSPD 351
Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTG 147
SVVYKGTMKGGPEI ISLCI+EE WTG
Sbjct: 352 SVVYKGTMKGGPEIAAISLCIKEENWTG 379
>Medtr1g084790.1 | LRR receptor-like kinase | HC |
chr1:37750328-37746464 | 20130731
Length = 627
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 40 IEIVMGTMVG-SLFLVAVLAAFQRC-NKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRR 97
+ I G ++G ++FLV C K AIV PW S + + ++ V +
Sbjct: 273 VPIFAGVIIGGAVFLVISSIGIYLCKTNKLAIVRPWSTGISGQ------LQKALVTGVPK 326
Query: 98 YSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIR-EEQWT 146
+R DLE ACEDFSN+IG+SP +YKGT+ G EI V S+ + + WT
Sbjct: 327 LNRSDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSVTLSKSWT 376
>Medtr3g465470.1 | tyrosine kinase family protein | HC |
chr3:26496702-26491350 | 20130731
Length = 533
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 26 PKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVI--PWKKSASQKDHM 83
PKHH ++ T+ G FLV V C + S +V PW S +
Sbjct: 179 PKHHSV----------VIWSTVGGFSFLVLVSFMVFICFRSSKVVTVKPWTTGLSGQ--- 225
Query: 84 TVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVIS 137
+ + + R +LEVACEDFSNIIGS D +YKGT+ G EI V+S
Sbjct: 226 ---LRKAFVTGIPSLKRGELEVACEDFSNIIGSLQDETIYKGTLSSGVEIAVVS 276
>Medtr3g071480.1 | LRR receptor-like kinase | HC |
chr3:32070026-32066014 | 20130731
Length = 645
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 40 IEIVMGTMVGSLF-LVAVLAAFQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRY 98
+ IV G + G+ F L+ + + K A V PW S + + + V +
Sbjct: 292 VAIVGGIVGGAAFILILSIVIYLFKTNKVATVKPWATGLSGQ------LQKAFVTGVPKL 345
Query: 99 SRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQWTGWQNW 151
R +LE ACEDFSN+IG+SP +YKGT+ G EI V S+ + T ++W
Sbjct: 346 KRSELEAACEDFSNVIGTSPIGNIYKGTLSSGVEIAVASVTV-----TSLKDW 393
>Medtr8g086390.2 | LRR receptor-like kinase | HC |
chr8:35836039-35830889 | 20130731
Length = 707
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 17 PNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKS 76
P+ T +G+ W I I G + ++F V + ++ + + ++ PWK
Sbjct: 330 PHDNQTSQPNSANGAPSKLWKYII-IFFGVVFLAIFTVIMFCILRK--RAAKVIKPWKTG 386
Query: 77 ASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVI 136
S + + + V + +R +LE ACEDFSNII S +YKGT+ G EI V
Sbjct: 387 ISGQ------LQKAFVTGVPKLNRAELETACEDFSNIINSFEKCTIYKGTLSSGVEIAVD 440
Query: 137 SLCI-REEQWT 146
S + E W+
Sbjct: 441 STVVTSSEDWS 451
>Medtr8g086390.1 | LRR receptor-like kinase | HC |
chr8:35836670-35830889 | 20130731
Length = 707
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 17 PNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKS 76
P+ T +G+ W I I G + ++F V + ++ + + ++ PWK
Sbjct: 330 PHDNQTSQPNSANGAPSKLWKYII-IFFGVVFLAIFTVIMFCILRK--RAAKVIKPWKTG 386
Query: 77 ASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVI 136
S + + + V + +R +LE ACEDFSNII S +YKGT+ G EI V
Sbjct: 387 ISGQ------LQKAFVTGVPKLNRAELETACEDFSNIINSFEKCTIYKGTLSSGVEIAVD 440
Query: 137 SLCI-REEQWT 146
S + E W+
Sbjct: 441 STVVTSSEDWS 451
>Medtr2g016360.1 | LRR receptor-like kinase | HC |
chr2:4988709-4992600 | 20130731
Length = 699
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 16 NPNH---QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIP 72
+P+H Q ++ PK G+ + I I++ V + ++ +L +++ K I+ P
Sbjct: 322 DPSHDGKQASQDHPKTFGN----YWKYIVIIIAVFVMVILIIVLLCFWKKPAAK--IIKP 375
Query: 73 WKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPE 132
W S + + + V + +R +LE ACEDFSNI+ + +YKGT+ G E
Sbjct: 376 WNTGISGQ------LQKAFITGVPKLNRAELETACEDFSNIVTNVEACTIYKGTLSSGVE 429
Query: 133 IGVISLCIREEQ-WT 146
I V+S I Q WT
Sbjct: 430 IAVVSGLINTRQEWT 444
>Medtr2g016320.1 | LRR receptor-like kinase | HC |
chr2:4970800-4974692 | 20130731
Length = 699
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 16 NPNH---QPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIP 72
+P+H Q ++ PK G+ + I I++ V + ++ +L +++ K I+ P
Sbjct: 322 DPSHDGKQASQDHPKTFGN----YWKYIVIIIAVFVMVILIIVLLCFWKKPAAK--IIKP 375
Query: 73 WKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPE 132
W S + + + V + +R +LE ACEDFSNI+ + +YKGT+ G E
Sbjct: 376 WNTGISGQ------LQKAFITGVPKLNRAELETACEDFSNIVTNVEACTIYKGTLSSGVE 429
Query: 133 IGVISLCIREEQ-WT 146
I V+S I Q WT
Sbjct: 430 IAVVSGLINTRQEWT 444