Miyakogusa Predicted Gene

Lj4g3v0998890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0998890.1 Non Characterized Hit- tr|A5C710|A5C710_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.61,0.00000000000002,seg,NULL; DUF2351,Ubiquitin-conjugating
enzyme E2C-binding protein,CUFF.48255.1
         (554 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076860.1 | DUF2351 family protein | HC | chr8:32612031-32...   614   e-176
Medtr3g062350.1 | hypothetical protein | LC | chr3:28153439-2815...    57   4e-08

>Medtr8g076860.1 | DUF2351 family protein | HC |
           chr8:32612031-32607722 | 20130731
          Length = 557

 Score =  614 bits (1584), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 327/566 (57%), Positives = 377/566 (66%), Gaps = 21/566 (3%)

Query: 1   MGSEIESPEMDEWRFTWESQSQXXXXXXXXXXXXXXXXXXXXQTVRXXXXX----XXXXX 56
           MGSE E  E  +WR+TWE+QS                       +               
Sbjct: 1   MGSEGEV-ENKKWRYTWEAQSHTPNLRLLLFPFPISKTLIPSHNLTVHLHSPPTFLNLTS 59

Query: 57  XXXXXXXXXXXPIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXXXXXXXXXXXXXX-R 115
                      PIP  VLLDAD PPT R+ +DHIEVK                      +
Sbjct: 60  TTTTTDLFFRVPIP-NVLLDADFPPTVRSFTDHIEVKLLLLLPVDHPVLSALHQTSPLPQ 118

Query: 116 PLPMDSDVENLASHGEVDFYCRTCAFKLTKHPLRNFVEMPSANWREVADNWFGACCCSFG 175
           P  MD DV+ L+S GEV+F CR+C + LTK P+RNFVEMPSANWRE+ADNWFG CCCSFG
Sbjct: 119 PFSMDYDVDKLSSAGEVEFVCRSCHYGLTKKPIRNFVEMPSANWREIADNWFGTCCCSFG 178

Query: 176 GVSEKLVLRYVNSHTCAPGICLLSPASVILCKDDLVECNLHAEGCGQ-RECGSKADNLXX 234
           G+SEKLV RYVNS+TCA G+CLLS  SV  CKDDLVE     E CGQ  EC   AD +  
Sbjct: 179 GISEKLVTRYVNSYTCAQGMCLLSSTSVTFCKDDLVESEF-PERCGQVHECSYVADAVSE 237

Query: 235 XXXXXXXKASFGLNEERTSTCADAGEVACAFEDKLRLVHPENEKLSMNFRGEGN------ 288
                    +FGLNEERTSTC+DAGE   AF++   + H  N +LS+N     N      
Sbjct: 238 DT------GNFGLNEERTSTCSDAGEANGAFDENATVAHHVNGQLSVNSNEVANNELDCS 291

Query: 289 DFSHSCTDSNGAEDVANTPSCCAHSMGIIGDEDGEHHLSGTARKTETIEIRENQKPLLNG 348
           DF+    D N  +DV N  SCCAH+   + +EDGEHHLS  ARK ET+E+  NQK  LNG
Sbjct: 292 DFARIRLDLNDNKDVTNIHSCCAHTTSTLVEEDGEHHLSTNARKIETVEMVGNQKTFLNG 351

Query: 349 FLEDVFMARLSNLSKDIDWHEFTCPQCMSLLGAYPCCEGYAPVDGGVRLFKCYISTCVPV 408
           FLEDVFMAR SNLSKDI WHEFTCPQC ++LGAYPCCEG APVDGGVRLFKCYISTCVPV
Sbjct: 352 FLEDVFMARSSNLSKDIYWHEFTCPQCTTVLGAYPCCEGCAPVDGGVRLFKCYISTCVPV 411

Query: 409 GGSEDIFSEYTMDKMFANQLMGCATDESSFRFVVRDLATKSPVLQIILLNPDTWSCSGNC 468
             S DIFS+YT++KMFAN+L  CA DES+FRFV+RDL TK PVLQIILLNPDTWSCSG+C
Sbjct: 412 LESGDIFSKYTVEKMFANRLTECANDESTFRFVIRDLTTKYPVLQIILLNPDTWSCSGDC 471

Query: 469 SVVEDEDPVPKLQLRPIIKVLFSDFRAATESQLRMIEEWATKNSAEIFFMLSRQIQDLMG 528
           +  ED+DP  KLQLRP+IKVLFSD +AATESQLRMIEEWA KNSAE  FML+ QIQDL+ 
Sbjct: 472 TRAEDKDPALKLQLRPVIKVLFSDSKAATESQLRMIEEWAAKNSAEDIFMLTYQIQDLVD 531

Query: 529 SLMTAKDIYPPSYASYQGLILSSVHQ 554
           SLM+AKD YPPS AS  GLILSS+ +
Sbjct: 532 SLMSAKDSYPPSCASLHGLILSSLQR 557


>Medtr3g062350.1 | hypothetical protein | LC |
           chr3:28153439-28153166 | 20130731
          Length = 71

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 384 CCEGYAPVDGGVRLFKCYISTCVPVGGSEDIFSEYT 419
           CC G  PVDGGVRLFKCYISTCVP+  S DIF+  T
Sbjct: 20  CCNGCEPVDGGVRLFKCYISTCVPLLRSGDIFNLTT 55