Miyakogusa Predicted Gene

Lj4g3v0986760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0986760.1 Non Characterized Hit- tr|I1JCM5|I1JCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.12,0,FAMILY NOT
NAMED,NULL; seg,NULL; UPF0261,Uncharacterised protein family
UPF0261,90099_g.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076950.1 | UPF0261 SACE-like protein | HC | chr8:32660930...   169   8e-43
Medtr8g076950.2 | UPF0261 SACE-like protein | HC | chr8:32660835...   169   1e-42

>Medtr8g076950.1 | UPF0261 SACE-like protein | HC |
           chr8:32660930-32654902 | 20130731
          Length = 753

 Score =  169 bits (429), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 109/166 (65%), Gaps = 4/166 (2%)

Query: 1   MSQALENFLNESS--HDIAXXXXXXXXXXXXXXXXXXXXXXXGIPKLIVSTVASGQTEPY 58
           MSQAL +FL +S+   +IA                       GIPKLIVSTVASGQTEPY
Sbjct: 99  MSQALHHFLQKSNSNQNIAGVIGVGGSGGTSLLSSPFTSLPLGIPKLIVSTVASGQTEPY 158

Query: 59  VGTSDLVLFPSIVDVAGXXXXXXXXXXXXXXXXXGMVVGRVQSLKDLDSRGEDCKPTVGL 118
           VGTSDLVLFP+IVDVAG                 GMVVGR++SL D  S   D K TVG+
Sbjct: 159 VGTSDLVLFPAIVDVAGVNSVSRVVFNNAAAAFAGMVVGRIRSLGD--SSLVDDKFTVGI 216

Query: 119 TMFGVTTSCVNAVRDRLRDEGYESLVFHATGVGGRAMEDLVRQGFI 164
           TMFGVTT CV+ VRDRL  EG+ESLVFHATGVGGRAME+L+R+GFI
Sbjct: 217 TMFGVTTPCVDVVRDRLHKEGFESLVFHATGVGGRAMENLIREGFI 262


>Medtr8g076950.2 | UPF0261 SACE-like protein | HC |
           chr8:32660835-32656522 | 20130731
          Length = 619

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 109/166 (65%), Gaps = 4/166 (2%)

Query: 1   MSQALENFLNESS--HDIAXXXXXXXXXXXXXXXXXXXXXXXGIPKLIVSTVASGQTEPY 58
           MSQAL +FL +S+   +IA                       GIPKLIVSTVASGQTEPY
Sbjct: 99  MSQALHHFLQKSNSNQNIAGVIGVGGSGGTSLLSSPFTSLPLGIPKLIVSTVASGQTEPY 158

Query: 59  VGTSDLVLFPSIVDVAGXXXXXXXXXXXXXXXXXGMVVGRVQSLKDLDSRGEDCKPTVGL 118
           VGTSDLVLFP+IVDVAG                 GMVVGR++SL D  S   D K TVG+
Sbjct: 159 VGTSDLVLFPAIVDVAGVNSVSRVVFNNAAAAFAGMVVGRIRSLGD--SSLVDDKFTVGI 216

Query: 119 TMFGVTTSCVNAVRDRLRDEGYESLVFHATGVGGRAMEDLVRQGFI 164
           TMFGVTT CV+ VRDRL  EG+ESLVFHATGVGGRAME+L+R+GFI
Sbjct: 217 TMFGVTTPCVDVVRDRLHKEGFESLVFHATGVGGRAMENLIREGFI 262