Miyakogusa Predicted Gene

Lj4g3v0985590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0985590.1 tr|G7LDW3|G7LDW3_MEDTR Tm-1^GCR26 protein
OS=Medicago truncatula GN=MTR_8g076950 PE=4 SV=1,95.5,0,FAMILY NOT
NAMED,NULL; TIM-br_sig_trns,TIM-barrel signal transduction protein,
predicted; seg,NULL; ,CUFF.48734.1
         (223 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076950.1 | UPF0261 SACE-like protein | HC | chr8:32660930...   408   e-114
Medtr8g076950.2 | UPF0261 SACE-like protein | HC | chr8:32660835...   151   6e-37

>Medtr8g076950.1 | UPF0261 SACE-like protein | HC |
           chr8:32660930-32654902 | 20130731
          Length = 753

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/222 (90%), Positives = 204/222 (91%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPFADANAVVLDMANE              CATDPFRRM++FLKQVESTG
Sbjct: 531 MAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTG 590

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAK 120
           FSGVQNFPTVGL+DGNFRQNLEETGMGYSLEVEMI+KAH MGLLTTPYAFNQHEAIEMAK
Sbjct: 591 FSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQHEAIEMAK 650

Query: 121 AGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPE 180
            GADIIVAHMGLTTTGSIGAKTAVSLEESVV VQAIADAAHRINPNAIVLCHGGPISGPE
Sbjct: 651 VGADIIVAHMGLTTTGSIGAKTAVSLEESVVLVQAIADAAHRINPNAIVLCHGGPISGPE 710

Query: 181 EAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSIFI 222
           EAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSI I
Sbjct: 711 EAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISI 752


>Medtr8g076950.2 | UPF0261 SACE-like protein | HC |
           chr8:32660835-32656522 | 20130731
          Length = 619

 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 74/88 (84%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPFADANAVVLDMANE              CATDPFRRM++FLKQVESTG
Sbjct: 531 MAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTG 590

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGY 88
           FSGVQNFPTVGL+DGNFRQNLEETGMGY
Sbjct: 591 FSGVQNFPTVGLYDGNFRQNLEETGMGY 618