Miyakogusa Predicted Gene

Lj4g3v0975570.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975570.2 Non Characterized Hit- tr|I1JCN0|I1JCN0_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,78.06,0,era:
GTP-binding protein Era,GTP-binding protein Era; small_GTP: small
GTP-binding protein domain,Sm,CUFF.48248.2
         (453 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077125.1 | GTP-binding protein Era protein | HC | chr8:32...   641   0.0  
Medtr5g020440.1 | GTP-binding ERG-like protein | HC | chr5:78093...    98   1e-20
Medtr6g024095.1 | GTP-binding ERG-like protein | HC | chr6:85520...    97   3e-20
Medtr1g033240.1 | GTP-binding protein Era protein | HC | chr1:11...    75   2e-13
Medtr4g065030.1 | GTPase Der protein | HC | chr4:24379001-243866...    60   5e-09
Medtr4g065030.3 | GTPase Der protein | HC | chr4:24379001-243866...    60   5e-09
Medtr4g065030.2 | GTPase Der protein | HC | chr4:24379001-243866...    60   5e-09
Medtr3g073790.1 | tRNA modification GTPase trmE | HC | chr3:3330...    52   1e-06

>Medtr8g077125.1 | GTP-binding protein Era protein | HC |
           chr8:32768242-32763709 | 20130731
          Length = 473

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/413 (75%), Positives = 353/413 (85%), Gaps = 18/413 (4%)

Query: 44  SFQLQHSLFPVHGFTL---FHRNRTDSPSHLCCRTRHRHSQPFANKQHHLVLHXXXXXXX 100
           +FQ+Q+S F V GFT    F RNRT+S SHLCCRT++  S+ F  KQ   +L        
Sbjct: 19  TFQIQNSFFAV-GFTTPTTFLRNRTESTSHLCCRTKYSPSKAFPTKQELFLLQQKVQED- 76

Query: 101 XXXXXXXXXXXXXASYSDDDTSFLSLTVKPDRNMALLDDYETEELDFDDGPNHRSGYVAL 160
                            DDD+SFLSL++KPDRN+ LLDDYETEEL +D  PNH+SGYVAL
Sbjct: 77  -------------DEEIDDDSSFLSLSMKPDRNLGLLDDYETEELGYDCDPNHKSGYVAL 123

Query: 161 LGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKEMHK 220
           LGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHR+LCICSG+DYQMVLYDTPGVLQ++ HK
Sbjct: 124 LGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDTPGVLQEQRHK 183

Query: 221 LDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKPPVLLILNKKDLIK 280
           LDSMMM+NVRSA VNADCVLVLVDACKAPEKIDE+LEE IG  K+KPP LLI+NKKDLIK
Sbjct: 184 LDSMMMQNVRSATVNADCVLVLVDACKAPEKIDEVLEEAIGGHKEKPPTLLIMNKKDLIK 243

Query: 281 PGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLPNGPSYYPKDIVSEHPER 340
           PGEVAKKLEWY KFT+VDEVIPVSAKYGHGV DVK+WILSKLPNGP+Y+PKDIVSEHPER
Sbjct: 244 PGEVAKKLEWYTKFTDVDEVIPVSAKYGHGVEDVKNWILSKLPNGPAYFPKDIVSEHPER 303

Query: 341 FFVAEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEILVEKNSQKMIVIGREG 400
           FFVAEIVREKIF+QYRNEIPY CQVNV+SYKARPNAKDFIQVEILVE+NSQK+I+IG+EG
Sbjct: 304 FFVAEIVREKIFLQYRNEIPYVCQVNVISYKARPNAKDFIQVEILVERNSQKIIIIGKEG 363

Query: 401 KALKLLATASRLDIEDFLQKKVYLEIEVKVRENWRQDEGLLKDYGYGGQIRVL 453
           K LKLLATA+RLD+EDFLQKKV+LEI+VK++ENWRQDEG LK  GYGGQI ++
Sbjct: 364 KTLKLLATAARLDVEDFLQKKVFLEIKVKIKENWRQDEGFLKHSGYGGQIGIV 416


>Medtr5g020440.1 | GTP-binding ERG-like protein | HC |
           chr5:7809327-7803289 | 20130731
          Length = 421

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 140/288 (48%), Gaps = 8/288 (2%)

Query: 152 NHRSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTP 211
           + +S  V ++G PN GKS+L N MVG K++ V+ K  TT H ++ + +  D Q+  +DTP
Sbjct: 134 DQKSLSVGIIGAPNAGKSSLTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTP 193

Query: 212 GVL---QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKP- 267
           G++       +K     +++  S+    + ++V+ D  +   + D  + + I  + ++  
Sbjct: 194 GLVLNCSGFPYKDAKARVESAWSSVNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSI 253

Query: 268 ---PVLLILNKKDLI-KPGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLP 323
                +L +NK DL+ K  ++ K  E +E     +    +S   G GV D+  +++ +  
Sbjct: 254 PNQKRVLCMNKIDLVEKKKDLTKVAEEFENLPGFERRFMISGMKGAGVKDLTQFLMEQAV 313

Query: 324 NGPSYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVE 383
             P       ++E   +    E+VRE++      EIPY  +  ++ +K   +    I+  
Sbjct: 314 ERPWEEDPFTMTEEVMKMISLEVVRERLLDHVHQEIPYDIEHRLIDWKELRDGSLRIEQH 373

Query: 384 ILVEKNSQKMIVIGREGKALKLLATASRLDIEDFLQKKVYLEIEVKVR 431
            L  K  Q  I++G+ G  +  +   +  ++    +K+V+L ++VK++
Sbjct: 374 FLTNKLGQLKILVGKRGSKIGRIGIEANEELRTIFKKQVHLVLQVKLK 421


>Medtr6g024095.1 | GTP-binding ERG-like protein | HC |
           chr6:8552099-8557850 | 20130731
          Length = 417

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 139/288 (48%), Gaps = 8/288 (2%)

Query: 152 NHRSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTP 211
           + +S  V ++G PN GKS+L N MVG K++ V+ K  TT H ++ + +  D Q+  +DTP
Sbjct: 130 DQKSLSVGIIGAPNAGKSSLTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTP 189

Query: 212 GVL---QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKP- 267
           G++       +K     +++  S+    + ++V+ D  +   + D  + + I  + ++  
Sbjct: 190 GLVLNCSGFPYKDAKARVESAWSSVNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSI 249

Query: 268 ---PVLLILNKKDLI-KPGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLP 323
                +L +NK DL+ K  ++ K  E +E     +    +S   G GV D+  +++ +  
Sbjct: 250 PNQKRVLCMNKIDLVEKKKDLTKVAEEFENLPGFERRFMISGMKGAGVKDLTQFLMEQAV 309

Query: 324 NGPSYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVE 383
             P       ++E   +    E+VRE +      EIPY  +  ++ +K   +    I+  
Sbjct: 310 ERPWEEDPFTMTEEVMKMISLEVVRESLLDHVHQEIPYDIEHRLIDWKELRDGSLRIEQH 369

Query: 384 ILVEKNSQKMIVIGREGKALKLLATASRLDIEDFLQKKVYLEIEVKVR 431
            L  K  Q  I++G+ G  +  +   +  ++    +K+V+L ++VK++
Sbjct: 370 FLTNKLGQLKILVGKRGSKIGRIGIEANEELRTIFKKQVHLVLQVKLK 417


>Medtr1g033240.1 | GTP-binding protein Era protein | HC |
           chr1:11942246-11935146 | 20130731
          Length = 391

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 126/266 (47%), Gaps = 8/266 (3%)

Query: 174 QMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVL---QKEMHKLDSMMMKNVR 230
           Q VG K++ V+ K  TT H ++ + +  D Q+  +DTPG++       +K     +++  
Sbjct: 126 QDVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTPGLVLNCSGFPYKDAKARVESAW 185

Query: 231 SAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKP----PVLLILNKKDLI-KPGEVA 285
           S+    + ++V+ D  +   + D  + + I  + ++       +L +NK DL+ K  ++ 
Sbjct: 186 SSVNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSIPNQKRVLCMNKIDLVEKKKDLT 245

Query: 286 KKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLPNGPSYYPKDIVSEHPERFFVAE 345
           K  E +E     +    +S   G+GV D+  +++ +    P       ++E   +    E
Sbjct: 246 KVAEEFENLPGFERRFMISGMKGNGVKDLTQFLMEQAVGRPWEEDPFTMTEEVMKMISLE 305

Query: 346 IVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEILVEKNSQKMIVIGREGKALKL 405
           +V E++      EIPY  + +++ +K   +    I+   L  K  Q  I++G+ G  +  
Sbjct: 306 VVCERLLDHVHQEIPYDIEHSLIGWKELRDGSLRIEQHFLTNKLGQLKILVGKRGSKIGR 365

Query: 406 LATASRLDIEDFLQKKVYLEIEVKVR 431
           +   +  ++    +K+V+L ++VK++
Sbjct: 366 IGIEANEELRTIFKKQVHLVLQVKLK 391


>Medtr4g065030.1 | GTPase Der protein | HC | chr4:24379001-24386634
           | 20130731
          Length = 646

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVL--- 214
           +A++G+PNVGKS L N++VG   +IV D+P  TR R+       D + ++ DT GVL   
Sbjct: 141 IAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVS 200

Query: 215 --------------------------QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKA 248
                                     +  + ++ SM+ +   +A   +  ++ LVD    
Sbjct: 201 KSQTTVMEDLDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAG 260

Query: 249 PEKIDELLEEGIGDLKDKPPVLLILNKKDLIKPGEVAKKLEWYEKFTNVD-EVIPVSAKY 307
               D  + + +        ++L +NK +  +     K++    +F ++  E IP+SA  
Sbjct: 261 LTAADVEIADWLRKNYSNKSIILAVNKCESPR-----KRIMQVSEFWSLGLEPIPISAIS 315

Query: 308 GHGVADVKDWILSKL 322
           G G  D+ D + S L
Sbjct: 316 GTGTGDLLDLVCSGL 330


>Medtr4g065030.3 | GTPase Der protein | HC | chr4:24379001-24386603
           | 20130731
          Length = 646

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVL--- 214
           +A++G+PNVGKS L N++VG   +IV D+P  TR R+       D + ++ DT GVL   
Sbjct: 141 IAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVS 200

Query: 215 --------------------------QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKA 248
                                     +  + ++ SM+ +   +A   +  ++ LVD    
Sbjct: 201 KSQTTVMEDLDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAG 260

Query: 249 PEKIDELLEEGIGDLKDKPPVLLILNKKDLIKPGEVAKKLEWYEKFTNVD-EVIPVSAKY 307
               D  + + +        ++L +NK +  +     K++    +F ++  E IP+SA  
Sbjct: 261 LTAADVEIADWLRKNYSNKSIILAVNKCESPR-----KRIMQVSEFWSLGLEPIPISAIS 315

Query: 308 GHGVADVKDWILSKL 322
           G G  D+ D + S L
Sbjct: 316 GTGTGDLLDLVCSGL 330


>Medtr4g065030.2 | GTPase Der protein | HC | chr4:24379001-24386634
           | 20130731
          Length = 646

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVL--- 214
           +A++G+PNVGKS L N++VG   +IV D+P  TR R+       D + ++ DT GVL   
Sbjct: 141 IAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVS 200

Query: 215 --------------------------QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKA 248
                                     +  + ++ SM+ +   +A   +  ++ LVD    
Sbjct: 201 KSQTTVMEDLDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAG 260

Query: 249 PEKIDELLEEGIGDLKDKPPVLLILNKKDLIKPGEVAKKLEWYEKFTNVD-EVIPVSAKY 307
               D  + + +        ++L +NK +  +     K++    +F ++  E IP+SA  
Sbjct: 261 LTAADVEIADWLRKNYSNKSIILAVNKCESPR-----KRIMQVSEFWSLGLEPIPISAIS 315

Query: 308 GHGVADVKDWILSKL 322
           G G  D+ D + S L
Sbjct: 316 GTGTGDLLDLVCSGL 330


>Medtr3g073790.1 | tRNA modification GTPase trmE | HC |
           chr3:33306093-33311427 | 20130731
          Length = 543

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 9/137 (6%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKE 217
           +A++G+PNVGKS+L N     + +IVT+   TTR  I    +     + L DT G+   +
Sbjct: 297 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASININGIPITLLDTAGIRDTD 356

Query: 218 MHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKD----KPPVLLIL 273
              ++ + ++   + A  AD +++ V A +     D  L E I   K+      PV+L++
Sbjct: 357 -DIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSAKESTGSSTPVILVV 415

Query: 274 NKKDLIKPGEVAKKLEW 290
           NK D  KP     + EW
Sbjct: 416 NKIDC-KP---CAETEW 428