Miyakogusa Predicted Gene

Lj4g3v0975550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975550.1 Non Characterized Hit- tr|I1ID01|I1ID01_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.08,8e-19,seg,NULL,CUFF.48469.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077135.3 | plant/F18B3-190 protein, putative | HC | chr8:...   306   2e-83
Medtr8g077135.2 | plant/F18B3-190 protein, putative | HC | chr8:...   306   2e-83
Medtr8g077135.1 | plant/F18B3-190 protein, putative | HC | chr8:...   306   2e-83
Medtr5g020870.1 | plant/F18B3-190 protein, putative | HC | chr5:...   211   5e-55

>Medtr8g077135.3 | plant/F18B3-190 protein, putative | HC |
           chr8:32773713-32770939 | 20130731
          Length = 449

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/247 (67%), Positives = 189/247 (76%), Gaps = 12/247 (4%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQL 60
           MPTFTAIAFDRLIEPG S+ A ++SASTS+P PN+++L RR+SEPTA +  KKPP RPQL
Sbjct: 1   MPTFTAIAFDRLIEPGGSR-AGQKSASTSVPVPNSKRLERRSSEPTA-TPRKKPPTRPQL 58

Query: 61  KPSLYATPEVTPLPDAP-----SSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDE 115
           KPSLYATPEVTPLPD+P     SSFPPSPYI+NHKRRGPRLLKSFSEA+VQAKQEV E+ 
Sbjct: 59  KPSLYATPEVTPLPDSPLQDSTSSFPPSPYIINHKRRGPRLLKSFSEANVQAKQEVCEEG 118

Query: 116 NXXXXXXXXXXXXXAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGSDLEHGCRENELSS 175
           N             AGDLQVT +N EP+ EEQ  G  DTKLS+ NG D+ H  REN+ SS
Sbjct: 119 NVSGKSSDTVVSSSAGDLQVTCVNPEPLKEEQDNGVQDTKLSTSNGGDVGHENRENK-SS 177

Query: 176 SITNGTHVEKVGALNSERDVESDDFFDPQD---SMSVTSYTDGEDNTGTERGVKLSTPGG 232
           +  NG HVEK+ ALN ERD ES+DF+DP+D   SMS TSYTDGEDNTGTER  K ST   
Sbjct: 178 NDPNGKHVEKLVALNLERDGESEDFYDPRDTMSSMSFTSYTDGEDNTGTERSAKYST-AA 236

Query: 233 EFFDAWE 239
           EFFDAWE
Sbjct: 237 EFFDAWE 243


>Medtr8g077135.2 | plant/F18B3-190 protein, putative | HC |
           chr8:32773713-32770939 | 20130731
          Length = 449

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/247 (67%), Positives = 189/247 (76%), Gaps = 12/247 (4%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQL 60
           MPTFTAIAFDRLIEPG S+ A ++SASTS+P PN+++L RR+SEPTA +  KKPP RPQL
Sbjct: 1   MPTFTAIAFDRLIEPGGSR-AGQKSASTSVPVPNSKRLERRSSEPTA-TPRKKPPTRPQL 58

Query: 61  KPSLYATPEVTPLPDAP-----SSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDE 115
           KPSLYATPEVTPLPD+P     SSFPPSPYI+NHKRRGPRLLKSFSEA+VQAKQEV E+ 
Sbjct: 59  KPSLYATPEVTPLPDSPLQDSTSSFPPSPYIINHKRRGPRLLKSFSEANVQAKQEVCEEG 118

Query: 116 NXXXXXXXXXXXXXAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGSDLEHGCRENELSS 175
           N             AGDLQVT +N EP+ EEQ  G  DTKLS+ NG D+ H  REN+ SS
Sbjct: 119 NVSGKSSDTVVSSSAGDLQVTCVNPEPLKEEQDNGVQDTKLSTSNGGDVGHENRENK-SS 177

Query: 176 SITNGTHVEKVGALNSERDVESDDFFDPQD---SMSVTSYTDGEDNTGTERGVKLSTPGG 232
           +  NG HVEK+ ALN ERD ES+DF+DP+D   SMS TSYTDGEDNTGTER  K ST   
Sbjct: 178 NDPNGKHVEKLVALNLERDGESEDFYDPRDTMSSMSFTSYTDGEDNTGTERSAKYST-AA 236

Query: 233 EFFDAWE 239
           EFFDAWE
Sbjct: 237 EFFDAWE 243


>Medtr8g077135.1 | plant/F18B3-190 protein, putative | HC |
           chr8:32773713-32770939 | 20130731
          Length = 449

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/247 (67%), Positives = 189/247 (76%), Gaps = 12/247 (4%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQL 60
           MPTFTAIAFDRLIEPG S+ A ++SASTS+P PN+++L RR+SEPTA +  KKPP RPQL
Sbjct: 1   MPTFTAIAFDRLIEPGGSR-AGQKSASTSVPVPNSKRLERRSSEPTA-TPRKKPPTRPQL 58

Query: 61  KPSLYATPEVTPLPDAP-----SSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDE 115
           KPSLYATPEVTPLPD+P     SSFPPSPYI+NHKRRGPRLLKSFSEA+VQAKQEV E+ 
Sbjct: 59  KPSLYATPEVTPLPDSPLQDSTSSFPPSPYIINHKRRGPRLLKSFSEANVQAKQEVCEEG 118

Query: 116 NXXXXXXXXXXXXXAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGSDLEHGCRENELSS 175
           N             AGDLQVT +N EP+ EEQ  G  DTKLS+ NG D+ H  REN+ SS
Sbjct: 119 NVSGKSSDTVVSSSAGDLQVTCVNPEPLKEEQDNGVQDTKLSTSNGGDVGHENRENK-SS 177

Query: 176 SITNGTHVEKVGALNSERDVESDDFFDPQD---SMSVTSYTDGEDNTGTERGVKLSTPGG 232
           +  NG HVEK+ ALN ERD ES+DF+DP+D   SMS TSYTDGEDNTGTER  K ST   
Sbjct: 178 NDPNGKHVEKLVALNLERDGESEDFYDPRDTMSSMSFTSYTDGEDNTGTERSAKYST-AA 236

Query: 233 EFFDAWE 239
           EFFDAWE
Sbjct: 237 EFFDAWE 243


>Medtr5g020870.1 | plant/F18B3-190 protein, putative | HC |
           chr5:7998293-8003187 | 20130731
          Length = 439

 Score =  211 bits (537), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/241 (53%), Positives = 156/241 (64%), Gaps = 8/241 (3%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQL 60
           MPT+TAIAFDR +E GASKP   + A TSMP P  +KL R TS P      K   PRP+L
Sbjct: 1   MPTYTAIAFDRFLETGASKPI-DKPAPTSMPVPKVQKLERTTSAPPV----KNKVPRPRL 55

Query: 61  KPSLYATPEVTPLP--DAPSSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDENXX 118
           KP+LY TPEV  LP  D+PSSFPPSPYI+NHKRRGPRL KS SEA V +K+ V  DE   
Sbjct: 56  KPALYTTPEVKQLPVVDSPSSFPPSPYIINHKRRGPRLHKSSSEASVLSKKNVSSDEKVD 115

Query: 119 XXXXXXXXXXXAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGSDLEHGCRENELSSSIT 178
                      AGDLQ +  N EPV +E + G    +    NGS+L +G +E E +SS  
Sbjct: 116 DKSFDTCAASSAGDLQFSFTNPEPVEKELLNGVCGGEFDRSNGSELMNGHKEPE-NSSFA 174

Query: 179 NGTHVEKVGALNSERDVESDDFFDPQDSMSVTSYTDGEDNTGTERGVKLSTPGGEFFDAW 238
           NG   E   ALN+ RD + +DFFDPQDSMS TS TD E+N GT+  +K S+PGGEF+DAW
Sbjct: 175 NGLIRENGPALNTARDTDIEDFFDPQDSMSFTSNTDVEENAGTDLSMKFSSPGGEFYDAW 234

Query: 239 E 239
           E
Sbjct: 235 E 235