Miyakogusa Predicted Gene

Lj4g3v0975500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975500.1 Non Characterized Hit- tr|F6GWV0|F6GWV0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.86,4e-19,seg,NULL,CUFF.48244.1
         (115 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077145.1 | hypothetical protein | HC | chr8:32781582-3278...   150   3e-37
Medtr5g020860.1 | hypothetical protein | HC | chr5:7995952-79967...   116   4e-27
Medtr7g026910.1 | hypothetical protein | HC | chr7:8957190-89574...    46   1e-05

>Medtr8g077145.1 | hypothetical protein | HC |
           chr8:32781582-32780710 | 20130731
          Length = 123

 Score =  150 bits (378), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 89/123 (72%), Gaps = 8/123 (6%)

Query: 1   MLRSFTTRR------YERLGKETASSALLQEGFKXXXXXXXXXXXXXXKMA-HSTLGNIN 53
           M RS TTRR      YERLGKE+A++ LL E FK              KM   ST G IN
Sbjct: 1   MFRSMTTRRGLGNGRYERLGKESATTTLLHEEFKRSTSMPSRATNTSRKMTLGSTFGEIN 60

Query: 54  LQRNPTKKAN-NTSKSTHPLFSFLDFRRKKKTTARPEFTRYLEYLKEGGMWDLNSSKPVI 112
           L+RNPTKKAN N+SK +HPL +FLDFRRKKKTTARPEF RY+EYLKEGGMWDLNS+KPVI
Sbjct: 61  LKRNPTKKANSNSSKKSHPLLNFLDFRRKKKTTARPEFARYIEYLKEGGMWDLNSNKPVI 120

Query: 113 YYK 115
           YYK
Sbjct: 121 YYK 123


>Medtr5g020860.1 | hypothetical protein | HC | chr5:7995952-7996710
           | 20130731
          Length = 125

 Score =  116 bits (291), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 81/125 (64%), Gaps = 10/125 (8%)

Query: 1   MLRSFTTRR----YERLGKETA--SSALLQEGFKXXXXXXXXXXXXXXKMA-HSTLGNIN 53
           M +S +TRR    YE+L KE    +    +E  K               MA  STLG+IN
Sbjct: 1   MFKSNSTRRGHEKYEKLDKEFGGHNETSNEEYLKRSTSVPSGPSNIKTNMAMASTLGDIN 60

Query: 54  LQRNPTKKANNTSK---STHPLFSFLDFRRKKKTTARPEFTRYLEYLKEGGMWDLNSSKP 110
           LQRNPTKKA++  K   +THPL +F DFRRKKK T++PEF RY+EYLKEGGMWD NS+KP
Sbjct: 61  LQRNPTKKASSDHKEKSTTHPLLNFFDFRRKKKATSKPEFARYVEYLKEGGMWDSNSNKP 120

Query: 111 VIYYK 115
           VIYYK
Sbjct: 121 VIYYK 125


>Medtr7g026910.1 | hypothetical protein | HC |
          chr7:8957190-8957471 | 20130731
          Length = 72

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%), Gaps = 3/34 (8%)

Query: 51 NINLQRNPTKKANNTSK---STHPLFSFLDFRRK 81
          +INLQRNPTKKA++  K   +THPL +F DFRRK
Sbjct: 37 DINLQRNPTKKASSDHKEKSTTHPLLNFFDFRRK 70