Miyakogusa Predicted Gene

Lj4g3v0974400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0974400.1 tr|A9RES0|A9RES0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65167
,34.18,1e-18,BAH,Bromo adjacent homology (BAH) domain; seg,NULL; Bromo
adjacent homology domain,Bromo adjacent ho,CUFF.48236.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109470.2 | bromo-adjacent-like (BAH) domain protein | HC ...   228   2e-60
Medtr3g109470.1 | bromo-adjacent-like (BAH) domain protein | HC ...   228   2e-60
Medtr1g008670.2 | bromo-adjacent-like (BAH) domain protein | HC ...   223   7e-59
Medtr1g008670.3 | bromo-adjacent-like (BAH) domain protein | HC ...   215   2e-56
Medtr1g008670.1 | bromo-adjacent-like (BAH) domain protein | HC ...   212   1e-55
Medtr1g008610.1 | bromo-adjacent-like (BAH) domain protein | LC ...   199   1e-51
Medtr2g062470.1 | BAH domain protein | HC | chr2:26371807-263789...   153   1e-37
Medtr3g109470.3 | bromo-adjacent-like (BAH) domain protein | HC ...   100   1e-21
Medtr1445s0010.1 | bromo-adjacent-like (BAH) domain protein | HC...    91   8e-19

>Medtr3g109470.2 | bromo-adjacent-like (BAH) domain protein | HC |
           chr3:50637118-50623280 | 20130731
          Length = 658

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/167 (67%), Positives = 127/167 (76%)

Query: 7   EFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFENRDK 66
           EFKW           +V FYESFTYDGV Y LYD+VYL   GE EPF+GK+IKI+EN +K
Sbjct: 11  EFKWGKHKCFGGKKREVNFYESFTYDGVHYTLYDSVYLYKEGEREPFIGKVIKIWENANK 70

Query: 67  SKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVCISKD 126
           SKKVK+ W+FRP EI  F++G E   NELF A GEGLGL N+NPLEAIAGKCNVVCISKD
Sbjct: 71  SKKVKILWFFRPCEIFNFLQGYEPVENELFLASGEGLGLTNINPLEAIAGKCNVVCISKD 130

Query: 127 IRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIEVKDIFN 173
            RN  P D+ LQ ADFV +RFFDVGQ KILD +DDK AGIEVK+IFN
Sbjct: 131 NRNPPPPDKDLQNADFVCYRFFDVGQHKILDKVDDKIAGIEVKNIFN 177


>Medtr3g109470.1 | bromo-adjacent-like (BAH) domain protein | HC |
           chr3:50637117-50623248 | 20130731
          Length = 672

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/167 (67%), Positives = 127/167 (76%)

Query: 7   EFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFENRDK 66
           EFKW           +V FYESFTYDGV Y LYD+VYL   GE EPF+GK+IKI+EN +K
Sbjct: 11  EFKWGKHKCFGGKKREVNFYESFTYDGVHYTLYDSVYLYKEGEREPFIGKVIKIWENANK 70

Query: 67  SKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVCISKD 126
           SKKVK+ W+FRP EI  F++G E   NELF A GEGLGL N+NPLEAIAGKCNVVCISKD
Sbjct: 71  SKKVKILWFFRPCEIFNFLQGYEPVENELFLASGEGLGLTNINPLEAIAGKCNVVCISKD 130

Query: 127 IRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIEVKDIFN 173
            RN  P D+ LQ ADFV +RFFDVGQ KILD +DDK AGIEVK+IFN
Sbjct: 131 NRNPPPPDKDLQNADFVCYRFFDVGQHKILDKVDDKIAGIEVKNIFN 177


>Medtr1g008670.2 | bromo-adjacent-like (BAH) domain protein | HC |
           chr1:1017899-1020042 | 20130731
          Length = 195

 Score =  223 bits (568), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 109/179 (60%), Positives = 140/179 (78%), Gaps = 6/179 (3%)

Query: 2   AEESIEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGE--FEPFVGKLIK 59
           + E++EFKW           D QFYESFT+DG DY+L+DTVYL +G E   EP +GK+IK
Sbjct: 15  SPETLEFKWGKKRGKGGKKRDTQFYESFTFDGEDYSLFDTVYLQNGNEPQSEPHIGKIIK 74

Query: 60  IFE--NRDKSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGK 117
           I+E  NR+K+KKVK+QW+FRP E+ KF++ I+  +NELFFA G G GL N+NP+E+IAGK
Sbjct: 75  IWEVPNREKAKKVKIQWFFRPREVSKFLKRIQIYYNELFFATGVGNGLTNINPVESIAGK 134

Query: 118 CNVVCISKDIRNSQPSDEALQKADFVFHRFFDVGQRKIL--DTIDDKSAGIEVKDIFNK 174
           CNVVCISKD RN QPSDEA+Q ADFVF+R+FDVGQRKI+  + +D+KS GI+VK +FNK
Sbjct: 135 CNVVCISKDARNPQPSDEAVQNADFVFYRYFDVGQRKIVEEEEVDEKSVGIDVKKLFNK 193


>Medtr1g008670.3 | bromo-adjacent-like (BAH) domain protein | HC |
           chr1:1017438-1021635 | 20130731
          Length = 238

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 135/174 (77%), Gaps = 6/174 (3%)

Query: 2   AEESIEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGE--FEPFVGKLIK 59
           + E++EFKW           D QFYESFT+DG DY+L+DTVYL +G E   EP +GK+IK
Sbjct: 63  SPETLEFKWGKKRGKGGKKRDTQFYESFTFDGEDYSLFDTVYLQNGNEPQSEPHIGKIIK 122

Query: 60  IFE--NRDKSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGK 117
           I+E  NR+K+KKVK+QW+FRP E+ KF++ I+  +NELFFA G G GL N+NP+E+IAGK
Sbjct: 123 IWEVPNREKAKKVKIQWFFRPREVSKFLKRIQIYYNELFFATGVGNGLTNINPVESIAGK 182

Query: 118 CNVVCISKDIRNSQPSDEALQKADFVFHRFFDVGQRKIL--DTIDDKSAGIEVK 169
           CNVVCISKD RN QPSDEA+Q ADFVF+R+FDVGQRKI+  + +D+KS GI+ K
Sbjct: 183 CNVVCISKDARNPQPSDEAVQNADFVFYRYFDVGQRKIVEEEEVDEKSVGIDGK 236


>Medtr1g008670.1 | bromo-adjacent-like (BAH) domain protein | HC |
           chr1:1017899-1021635 | 20130731
          Length = 225

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/178 (58%), Positives = 136/178 (76%), Gaps = 6/178 (3%)

Query: 2   AEESIEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGE--FEPFVGKLIK 59
           + E++EFKW           D QFYESFT+DG DY+L+DTVYL +G E   EP +GK+IK
Sbjct: 15  SPETLEFKWGKKRGKGGKKRDTQFYESFTFDGEDYSLFDTVYLQNGNEPQSEPHIGKIIK 74

Query: 60  IFE--NRDKSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGK 117
           I+E  NR+K+KKVK+QW+FRP E+ KF++ I+  +NELFFA G G GL N+NP+E+IAGK
Sbjct: 75  IWEVPNREKAKKVKIQWFFRPREVSKFLKRIQIYYNELFFATGVGNGLTNINPVESIAGK 134

Query: 118 CNVVCISKDIRNSQPSDEALQKADFVFHRFFDVGQRKIL--DTIDDKSAGIEVKDIFN 173
           CNVVCISKD RN QPSDEA+Q ADFVF+R+FDVGQRKI+  + +D+KS GI+   + N
Sbjct: 135 CNVVCISKDARNPQPSDEAVQNADFVFYRYFDVGQRKIVEEEEVDEKSVGIDGFHLLN 192


>Medtr1g008610.1 | bromo-adjacent-like (BAH) domain protein | LC |
           chr1:993930-996385 | 20130731
          Length = 192

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 126/171 (73%), Gaps = 1/171 (0%)

Query: 4   ESIEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFEN 63
           E++EFKW           D+QFY+SFT  GVDY+L+D VY+ +    EP +GK+IKI+E 
Sbjct: 21  ETLEFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKNDFA-EPRIGKIIKIWET 79

Query: 64  RDKSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVCI 123
               +K+KVQW+FRP E+ K +  I+   NELFFACG+G GLA ++PLE+IAGKCN+VCI
Sbjct: 80  PTLERKIKVQWFFRPIEVSKCLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVCI 139

Query: 124 SKDIRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIEVKDIFNK 174
           SKD RN Q SD+    A FVF+R+FDVGQRKI++ +DDKS GIEVK+IFNK
Sbjct: 140 SKDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDKSIGIEVKNIFNK 190


>Medtr2g062470.1 | BAH domain protein | HC | chr2:26371807-26378909
           | 20130731
          Length = 556

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 105/168 (62%), Gaps = 1/168 (0%)

Query: 7   EFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFENRDK 66
           +FKW             QFY+SF YDGV+Y LYD+VY       E  +GKL+K++E   +
Sbjct: 20  DFKWGNKRGIGVKNKHTQFYDSFVYDGVEYFLYDSVYFYHTDHVETSIGKLVKMYET-SR 78

Query: 67  SKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVCISKD 126
           +K ++V W+FRP EIR F  G +   NELF A G+G GL N+N LE+I GKCNVVC S+D
Sbjct: 79  AKMIRVVWFFRPSEIRNFHRGYKPCWNELFLASGKGKGLFNINLLESILGKCNVVCTSED 138

Query: 127 IRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIEVKDIFNK 174
            RN +PS+  L++ADF+F   FDV +  I D   DK  G EV+  FNK
Sbjct: 139 RRNPKPSETELKRADFLFKCTFDVDRCVIDDKFPDKIDGAEVELFFNK 186


>Medtr3g109470.3 | bromo-adjacent-like (BAH) domain protein | HC |
           chr3:50637107-50623248 | 20130731
          Length = 575

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 52/62 (83%)

Query: 112 EAIAGKCNVVCISKDIRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIEVKDI 171
           EAIAGKCNVVCISKD RN  P D+ LQ ADFV +RFFDVGQ KILD +DDK AGIEVK+I
Sbjct: 19  EAIAGKCNVVCISKDNRNPPPPDKDLQNADFVCYRFFDVGQHKILDKVDDKIAGIEVKNI 78

Query: 172 FN 173
           FN
Sbjct: 79  FN 80


>Medtr1445s0010.1 | bromo-adjacent-like (BAH) domain protein | HC |
           scaffold1445:984-1349 | 20130731
          Length = 122

 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 7   EFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFENRDK 66
           +FKW           D QFY+SF Y+GV+Y L+D VY       E  +G L+K+FEN  +
Sbjct: 17  DFKWGNKRGIGVKNKDTQFYDSFVYEGVEYFLHDCVYFYHTDHVETSIGMLVKMFEN-GR 75

Query: 67  SKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPL 111
            K ++V W+FRP EI+ F    +   NELF A G+G GL NVN +
Sbjct: 76  RKMIRVVWFFRPSEIQSFHRSYQPSWNELFLASGKGKGLTNVNSV 120