Miyakogusa Predicted Gene

Lj4g3v0913490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0913490.1 tr|E9BZ66|E9BZ66_CAPO3 Vacuolar proton pump
subunit H OS=Capsaspora owczarzaki (strain ATCC 30864)
G,33.96,0.00000000003,ARM repeat,Armadillo-type fold; V-TYPE PROTON
ATPASE SUBUNIT H,NULL; V-TYPE PROTON ATPASE SUBUNIT
H,,NODE_40529_length_590_cov_184.867798.path2.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078370.1 | vacuolar H+-ATPase subunit H, putative | HC | ...   220   2e-58

>Medtr8g078370.1 | vacuolar H+-ATPase subunit H, putative | HC |
           chr8:33396334-33390908 | 20130731
          Length = 486

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/110 (94%), Positives = 108/110 (98%)

Query: 1   MDQAELTVDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRV 60
           MDQAELT DQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSES RAQLLDDDGPAYVRV
Sbjct: 1   MDQAELTTDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESQRAQLLDDDGPAYVRV 60

Query: 61  FIHVLRDIFKEDTVEYVLALIDEMLTANPKRARLFHDSALADEDTYEPFL 110
           F+HVLRDIFKEDTVEYVLA+IDEMLTANPKRARLFHD+ALAD+DTYEPFL
Sbjct: 61  FVHVLRDIFKEDTVEYVLAMIDEMLTANPKRARLFHDNALADDDTYEPFL 110