Miyakogusa Predicted Gene

Lj4g3v0891300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0891300.1 Non Characterized Hit- tr|A5ATA8|A5ATA8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.68,0.00000000005,UBN2_3,NULL,CUFF.48161.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1262s0010.1 | hypothetical protein | HC | scaffold1262:34-1...   134   3e-32
Medtr3g046340.1 | hypothetical protein | LC | chr3:15305664-1530...    74   8e-14
Medtr4g020870.1 | hypothetical protein | LC | chr4:6720953-67198...    52   3e-07
Medtr7g039280.1 | hypothetical protein | LC | chr7:14583454-1458...    50   8e-07

>Medtr1262s0010.1 | hypothetical protein | HC | scaffold1262:34-1511
           | 20130731
          Length = 404

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 3/132 (2%)

Query: 29  TKYFHSLKRVWQDLDLFNTYKWNSAEDAKHHRQTVEEGRIFQFLAGLNEELDEVRGRIIG 88
           TKYF  L+R+W+DLDLFN Y+W S ED KH+++ V+   +F+FLAGLN E DEVRGRI+G
Sbjct: 146 TKYFSCLRRIWKDLDLFNEYEWKSPEDCKHYQKMVDVSCVFKFLAGLNVEFDEVRGRILG 205

Query: 89  RATLPSLGEVFAEVRREETRRSVMM-GKTKMDAPPSETNALAVETAALKTSTNQKNFSNR 147
           R  +P +GEVFAEVRREE+RR VM+  K  +  PP E +ALAV     K+  N +   N 
Sbjct: 206 RNPIPPIGEVFAEVRREESRRQVMLEKKKVVVPPPVEGSALAVPQVNHKSFCNPRGGDNT 265

Query: 148 --WCDHCNRPGH 157
              CD+C R  H
Sbjct: 266 HLVCDYCGRNRH 277


>Medtr3g046340.1 | hypothetical protein | LC |
           chr3:15305664-15304725 | 20130731
          Length = 201

 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 3/104 (2%)

Query: 12  YELTLKVREIRQGGNNVTKYFHSLKRVWQDLDLFNTY---KWNSAEDAKHHRQTVEEGRI 68
           YEL  ++   +QG  +VT Y+ SLK +W +LDL+  Y   K    ED+    + +E  R 
Sbjct: 24  YELENRILNTKQGALSVTVYYMSLKGLWAELDLYYDYQNFKMQCNEDSATLSKFIERSRN 83

Query: 69  FQFLAGLNEELDEVRGRIIGRATLPSLGEVFAEVRREETRRSVM 112
           F+FL+GLN E D +R  I+ +  L SL EVF  VR +E+   V+
Sbjct: 84  FKFLSGLNFEFDRIRVEILSKDKLSSLLEVFKIVRGKESLARVL 127


>Medtr4g020870.1 | hypothetical protein | LC | chr4:6720953-6719863
           | 20130731
          Length = 178

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 30/45 (66%)

Query: 64  EEGRIFQFLAGLNEELDEVRGRIIGRATLPSLGEVFAEVRREETR 108
           E  R+F FL GLN  LDEV+GRI+    LP+L E F EVRR+  R
Sbjct: 16  ENDRVFMFLVGLNNCLDEVQGRILEEIPLPTLRETFLEVRRKIER 60


>Medtr7g039280.1 | hypothetical protein | LC |
           chr7:14583454-14584237 | 20130731
          Length = 227

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 22/137 (16%)

Query: 35  LKRVWQDLD---------LFNTYKWNSAEDAKHHRQTVEEGRIFQFLAGLNEELDEVRGR 85
           +K +W++L            +  +  S++ AK HR    E +I QFL GLN++   VR +
Sbjct: 1   MKSLWEELSSHRPIPNCACVHPCRCASSKVAKIHR---NEDQIMQFLTGLNDQFSVVRTQ 57

Query: 86  IIGRATLPSLGEVFAEVRREETRRSVMMGKTKMDAPPSETNALAVE-TAALKTSTNQKNF 144
           ++    LPSL +V++ V +EE+  + +   T++    SE  ++ V  T   K+    K+F
Sbjct: 58  VLLVDPLPSLNKVYSLVVQEESNNASI---TQLSV--SEDTSIQVNATDNRKSQGGVKSF 112

Query: 145 S----NRWCDHCNRPGH 157
           S     R+C  CN   H
Sbjct: 113 SQPKPTRFCTFCNCTNH 129