Miyakogusa Predicted Gene

Lj4g3v0880270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0880270.1 Non Characterized Hit- tr|I1LST6|I1LST6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55114
PE,98.74,0,3a0501s007: preprotein translocase, SecY
subunit,SecY/SEC61-alpha family; Preprotein translocase
Sec,CUFF.48192.1
         (476 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076770.1 | protein transporter Sec61 subunit alpha-like p...   955   0.0  
Medtr8g058330.1 | protein transporter Sec61 subunit alpha-like p...   954   0.0  

>Medtr8g076770.1 | protein transporter Sec61 subunit alpha-like
           protein | HC | chr8:32556114-32560197 | 20130731
          Length = 476

 Score =  955 bits (2469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/476 (98%), Positives = 474/476 (99%)

Query: 1   MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
           MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1   MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60

Query: 61  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
           ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGS 180
           LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILII+QL FAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180

Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQ 240
           GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR+DKVRALREAFYRQ
Sbjct: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
           NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 301 VSNLYFISQLLHRKYSGNFFVNLLGKWKDSEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
           VSNLYFISQLLHRKYSGNF VNLLGKWK+SEYGGGHSIPVGGIAYYITAPSSLADMAANP
Sbjct: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360

Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
           FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420

Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
           TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF
Sbjct: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476


>Medtr8g058330.1 | protein transporter Sec61 subunit alpha-like
           protein | HC | chr8:20087094-20090841 | 20130731
          Length = 476

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/476 (98%), Positives = 474/476 (99%)

Query: 1   MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
           MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1   MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60

Query: 61  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
           ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61  ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120

Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGS 180
           LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIILQL FAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180

Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQ 240
           GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR+DKVRALREAFYRQ
Sbjct: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240

Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
           NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300

Query: 301 VSNLYFISQLLHRKYSGNFFVNLLGKWKDSEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
           VSNLYFISQLLHRKYSGNF VNLLGKWK+SEYGGGHSIPVGGIAYYITAPSSLADMAANP
Sbjct: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360

Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
           FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420

Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
           TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF
Sbjct: 421 TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476