Miyakogusa Predicted Gene

Lj4g3v0880220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0880220.1 Non Characterized Hit- tr|K4CRE9|K4CRE9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.85,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF588,Uncharacterised protein family UPF0497, tran,CUFF.48154.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-3358302...   243   5e-65
Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 ...   221   3e-58
Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-2579685...   184   2e-47
Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-2173633...   104   2e-23
Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-2173631...   104   2e-23
Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-3286899...   104   3e-23
Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 ...    97   4e-21
Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-3290332...    74   5e-14
Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-1632211...    57   7e-09
Medtr4g103900.1 | hypothetical protein | LC | chr4:42988023-4298...    52   3e-07
Medtr5g006060.1 | transmembrane protein, putative | LC | chr5:74...    49   1e-06
Medtr2g028500.1 | hypothetical protein | LC | chr2:10574608-1057...    49   1e-06
Medtr3g057050.1 | hypothetical protein | LC | chr3:22848224-2284...    49   2e-06
Medtr5g015510.1 | hypothetical protein | LC | chr5:5378480-53811...    49   2e-06

>Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-33583022 |
           20130731
          Length = 152

 Score =  243 bits (620), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/152 (79%), Positives = 129/152 (84%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M+ELPG  GTS+SFALRLGQTVFSSASL FMCL VDFYGY+AFCFLV VMGLVISWS TL
Sbjct: 1   MEELPGVLGTSSSFALRLGQTVFSSASLFFMCLDVDFYGYSAFCFLVMVMGLVISWSTTL 60

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
           LVVDAYS+FIK +P QR+ I  +  GDMVLSYL LAAACSTASVTDLL  AD SYCP  L
Sbjct: 61  LVVDAYSIFIKSVPKQRRFIFTITFGDMVLSYLLLAAACSTASVTDLLRSADKSYCPENL 120

Query: 121 CGRYQLSAAMAFLAWFLSSASCLFNFWLLPSL 152
           C RYQ+SAAMA LAWFLSSASCL NFWL PSL
Sbjct: 121 CSRYQISAAMAILAWFLSSASCLINFWLFPSL 152


>Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 |
           20130731
          Length = 152

 Score =  221 bits (562), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/152 (79%), Positives = 133/152 (87%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M+ELPGAFGTSAS  LRLGQ VFSSASL FMCL V FY YT+F FLVTVMGL I WSITL
Sbjct: 1   MEELPGAFGTSASLTLRLGQIVFSSASLCFMCLDVGFYSYTSFSFLVTVMGLAIPWSITL 60

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
            +VDAYSVFI+CLP Q++LILI+ LGDMV+SYLSLAAACS ASV DLL +A  S+CPAKL
Sbjct: 61  FMVDAYSVFIQCLPIQKRLILIIVLGDMVMSYLSLAAACSAASVIDLLHEAGKSHCPAKL 120

Query: 121 CGRYQLSAAMAFLAWFLSSASCLFNFWLLPSL 152
           CGRYQLSAAMAFL+WFLS ASCLFNFW+LPSL
Sbjct: 121 CGRYQLSAAMAFLSWFLSLASCLFNFWILPSL 152


>Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-25796852 |
           20130731
          Length = 166

 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/152 (67%), Positives = 125/152 (82%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M+E+PG+ GTSASF LRLGQT+FSSASLLFM LGV+FY YTAFC+LVT+MGLVI WS TL
Sbjct: 15  MNEIPGSVGTSASFILRLGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTL 74

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
            +VD YSV +KC   Q  ++LI+ +GD VLS L+LAAA STASV DLLL++  S+CP KL
Sbjct: 75  ALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAAASTASVVDLLLNSQGSFCPIKL 134

Query: 121 CGRYQLSAAMAFLAWFLSSASCLFNFWLLPSL 152
           C RY++SA MAF++WFLS AS LFN +LLPSL
Sbjct: 135 CCRYRISAVMAFVSWFLSLASSLFNLYLLPSL 166


>Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-21736333 |
           20130731
          Length = 185

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 1/151 (0%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M ++ G  GT    ALR+ Q VF++A+L  M    DF   TAFCFLV   GL   WSI L
Sbjct: 35  MKDIQGMPGTIGGLALRVSQFVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIAL 94

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
            + D Y++ ++      +L+    +GD V S L  AAAC++A +T +L+D D   C    
Sbjct: 95  AITDVYAILVRRSLQNYRLVSSFTIGDGVTSTLIFAAACASAGIT-VLIDNDLGNCNENH 153

Query: 121 CGRYQLSAAMAFLAWFLSSASCLFNFWLLPS 151
           C +++ +  MAF+ WF +  S L NFW L S
Sbjct: 154 CVQFETATGMAFICWFTTVPSFLLNFWSLAS 184


>Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-21736310 |
           20130731
          Length = 185

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 1/151 (0%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M ++ G  GT    ALR+ Q VF++A+L  M    DF   TAFCFLV   GL   WSI L
Sbjct: 35  MKDIQGMPGTIGGLALRVSQFVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIAL 94

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
            + D Y++ ++      +L+    +GD V S L  AAAC++A +T +L+D D   C    
Sbjct: 95  AITDVYAILVRRSLQNYRLVSSFTIGDGVTSTLIFAAACASAGIT-VLIDNDLGNCNENH 153

Query: 121 CGRYQLSAAMAFLAWFLSSASCLFNFWLLPS 151
           C +++ +  MAF+ WF +  S L NFW L S
Sbjct: 154 CVQFETATGMAFICWFTTVPSFLLNFWSLAS 184


>Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-32868997 |
           20130731
          Length = 152

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 2/150 (1%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M + PG  GT     LRL Q +F++ S+ FM     F+ +TAFC+L+  MGL   WS  L
Sbjct: 1   MKDFPGTPGTVLGLILRLSQFIFAAGSIAFMVSSSSFFNFTAFCYLIAAMGLQAIWSFVL 60

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCP-AK 119
            ++DAY+V  + + H   L+ +  +GD   S LSLAAACS+A +T L  + D  +C   +
Sbjct: 61  ALMDAYAVVRRKVLHNPVLVCLYLVGDWATSTLSLAAACSSAGITVLFFN-DLRHCYFGE 119

Query: 120 LCGRYQLSAAMAFLAWFLSSASCLFNFWLL 149
            C  YQLS   AFL+W   S S L   WLL
Sbjct: 120 ECRNYQLSVVCAFLSWIPISISSLIMLWLL 149


>Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 |
           20130731
          Length = 155

 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 4/155 (2%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M  L G  GT + F LRLGQ  F +AS+  M     F  YTAFC+L   MGL + WS  L
Sbjct: 2   MQRLLGGPGTVSGFLLRLGQCAFGAASISVMVTSFGFSTYTAFCYLTASMGLQVLWSFGL 61

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKL 120
             +D Y++  K       L+ +  +GD V + LSLAAACS+A V  +L   D   C    
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVV-VLYTRDVDMCATHK 120

Query: 121 ---CGRYQLSAAMAFLAWFLSSASCLFNFWLLPSL 152
              C RYQ+S A+AF+ W L++ S    FW+L S+
Sbjct: 121 IIPCHRYQVSVALAFVTWALTAMSSHVMFWILASV 155


>Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-32903328 |
           20130731
          Length = 151

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 36  DFYGYTAFCFLVTVMGLVISWSITLLVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSL 95
           D Y     C+LV  MGL   WS  L ++DAY+V  K + H   L+ +  +GD V + LSL
Sbjct: 35  DRYTQVKTCYLVAAMGLQAIWSFLLALMDAYAVVRKKVLHNPALVSLYLVGDWVSATLSL 94

Query: 96  AAACSTASVTDLLLDADASYCP-AKLCGRYQLSAAMAFLAWFLSSASCLFNFWLL 149
           AAACS+A +  L    D  +C   + C  YQ+S   AFL+W  +S S L   WLL
Sbjct: 95  AAACSSAGIIVLYFH-DLGHCYFGEKCRSYQISVGFAFLSWIPTSISSLIMLWLL 148


>Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-16322113 |
           20130731
          Length = 152

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 1   MDELPGAFGTSASFALRLGQTVFSSASLLFMCLGVDFYGYTAFCFLVTVMGLVISWSITL 60
           M    G  GT     LR+ Q +F++ S+  +     F+ YT+FCFL+  M L I WS  L
Sbjct: 1   MKNFSGTPGTVLGLILRMSQFIFATGSIASIATTPSFFYYTSFCFLIASMALQIIWSFVL 60

Query: 61  LVVDAYSVFIKCLPHQRKLILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCP-AK 119
            ++DAY++  K +     LI +  +GD V + +SLAAA ++A +T L    D  +C   +
Sbjct: 61  ALLDAYALLKKKVLLNPVLISLFVVGDWVTATISLAAASASAGLTVLYFH-DMGHCHFGE 119

Query: 120 LCGRYQLSAAMAFL 133
            C +YQ+S A AF+
Sbjct: 120 ECQKYQISVAFAFM 133


>Medtr4g103900.1 | hypothetical protein | LC |
           chr4:42988023-42987440 | 20130731
          Length = 59

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 80  ILIVFLGDMVLSYLSLAAACSTASVTDLLLDADASYCPAKLCGRYQLSAAMAFLAWFLSS 139
           +L V+  D + S   +   C+   V DLL +A  S+C  KLC RYQ  AAM FL+WF+S+
Sbjct: 1   MLTVYRYDQIPS--EILHLCAKYYVIDLLHEAGRSHCTTKLCDRYQFYAAMTFLSWFIST 58

Query: 140 A 140
            
Sbjct: 59  T 59


>Medtr5g006060.1 | transmembrane protein, putative | LC |
           chr5:744908-747191 | 20130731
          Length = 66

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 104 VTDLLLDADASYCPAKLCGRYQLSAAMAFLAWFLSS 139
           V D L +A  S+C AKLC RYQ  AAMAFL+WF+S+
Sbjct: 30  VIDRLHEAGISHCTAKLCDRYQFFAAMAFLSWFIST 65


>Medtr2g028500.1 | hypothetical protein | LC |
           chr2:10574608-10574314 | 20130731
          Length = 53

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 104 VTDLLLDADASYCPAKLCGRYQLSAAMAFLAWFLSSA 140
           V DLL +A  S+C  KLC RYQ SAAM  L+WF+SS 
Sbjct: 4   VIDLLHEAGRSHCTTKLCDRYQFSAAMTLLSWFISSG 40


>Medtr3g057050.1 | hypothetical protein | LC |
           chr3:22848224-22847312 | 20130731
          Length = 65

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 104 VTDLLLDADASYCPAKLCGRYQLSAAMAFLAWFL 137
           V DLL +A  S+C  KLC RYQ SAAM FL+WF+
Sbjct: 32  VIDLLHEAGRSHCTTKLCDRYQFSAAMTFLSWFI 65


>Medtr5g015510.1 | hypothetical protein | LC | chr5:5378480-5381147
           | 20130731
          Length = 56

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query: 106 DLLLDADASYCPAKLCGRYQLSAAMAFLAWFLSSA 140
           DLL +A  S C  KLC RYQ SAAM FL+WF+S+A
Sbjct: 22  DLLHEAGISQCTTKLCDRYQFSAAMTFLSWFISTA 56