Miyakogusa Predicted Gene

Lj4g3v0878880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0878880.1 Non Characterized Hit- tr|I1JLL6|I1JLL6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55778
PE,40,4e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF588,Uncharacterised protein family
UPF,NODE_62759_length_1151_cov_8.615986.path2.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-2579685...   222   9e-59
Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 ...   154   3e-38
Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-3358302...   142   1e-34
Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-3286899...    87   5e-18
Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 ...    79   1e-15
Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-2173633...    69   2e-12
Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-2173631...    69   2e-12
Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-1632211...    61   4e-10
Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-3290332...    58   4e-09

>Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-25796852 |
           20130731
          Length = 166

 Score =  222 bits (566), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 123/152 (80%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M+E PGSVGTSAS  LRLGQT+ SSASLLFMSLGVEFYSYT+FC+LVTIMGLVIPWSFTL
Sbjct: 15  MNEIPGSVGTSASFILRLGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTL 74

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A+VDGYS LVKCP+RQPGILLII+VGDW                     NS GSFCPIK 
Sbjct: 75  ALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAAASTASVVDLLLNSQGSFCPIKL 134

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPSL 152
           CCRYRISAVMAF++W LSLASSLFNL+LLPSL
Sbjct: 135 CCRYRISAVMAFVSWFLSLASSLFNLYLLPSL 166


>Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 |
           20130731
          Length = 152

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 99/152 (65%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M+E PG+ GTSASL+LRLGQ + SSASL FM L V FYSYTSF FLVT+MGL IPWS TL
Sbjct: 1   MEELPGAFGTSASLTLRLGQIVFSSASLCFMCLDVGFYSYTSFSFLVTVMGLAIPWSITL 60

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
            +VD YS  ++C   Q  ++LII++GD                       +  S CP K 
Sbjct: 61  FMVDAYSVFIQCLPIQKRLILIIVLGDMVMSYLSLAAACSAASVIDLLHEAGKSHCPAKL 120

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPSL 152
           C RY++SA MAFL+W LSLAS LFN W+LPSL
Sbjct: 121 CGRYQLSAAMAFLSWFLSLASCLFNFWILPSL 152


>Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-33583022 |
           20130731
          Length = 152

 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/152 (49%), Positives = 91/152 (59%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M+E PG +GTS+S +LRLGQT+ SSASL FM L V+FY Y++FCFLV +MGLVI WS TL
Sbjct: 1   MEELPGVLGTSSSFALRLGQTVFSSASLFFMCLDVDFYGYSAFCFLVMVMGLVISWSTTL 60

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
            VVD YS  +K   +Q   +  I  GD                      ++D S+CP   
Sbjct: 61  LVVDAYSIFIKSVPKQRRFIFTITFGDMVLSYLLLAAACSTASVTDLLRSADKSYCPENL 120

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPSL 152
           C RY+ISA MA L W LS AS L N WL PSL
Sbjct: 121 CSRYQISAAMAILAWFLSSASCLINFWLFPSL 152


>Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-32868997 |
           20130731
          Length = 152

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M +FPG+ GT   L LRL Q I ++ S+ FM     F+++T+FC+L+  MGL   WSF L
Sbjct: 1   MKDFPGTPGTVLGLILRLSQFIFAAGSIAFMVSSSSFFNFTAFCYLIAAMGLQAIWSFVL 60

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A++D Y+ + +  +  P ++ + +VGDW                     N D   C    
Sbjct: 61  ALMDAYAVVRRKVLHNPVLVCLYLVGDWATSTLSLAAACSSAGITVLFFN-DLRHCYFGE 119

Query: 121 CCR-YRISAVMAFLTWSLSLASSLFNLWLLPS 151
            CR Y++S V AFL+W     SSL  LWLL +
Sbjct: 120 ECRNYQLSVVCAFLSWIPISISSLIMLWLLAA 151


>Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 |
           20130731
          Length = 155

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 4/155 (2%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M    G  GT +   LRLGQ    +AS+  M     F +YT+FC+L   MGL + WSF L
Sbjct: 2   MQRLLGGPGTVSGFLLRLGQCAFGAASISVMVTSFGFSTYTAFCYLTASMGLQVLWSFGL 61

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A +D Y+   K  ++ P ++ + +VGDW                       D   C    
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVVVLYTR-DVDMCATHK 120

Query: 121 ---CCRYRISAVMAFLTWSLSLASSLFNLWLLPSL 152
              C RY++S  +AF+TW+L+  SS    W+L S+
Sbjct: 121 IIPCHRYQVSVALAFVTWALTAMSSHVMFWILASV 155


>Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-21736333 |
           20130731
          Length = 185

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 1/151 (0%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M +  G  GT   L+LR+ Q + ++A+L  M+   +F S T+FCFLV   GL   WS  L
Sbjct: 35  MKDIQGMPGTIGGLALRVSQFVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIAL 94

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A+ D Y+ LV+  ++   ++    +GD                      N  G+ C    
Sbjct: 95  AITDVYAILVRRSLQNYRLVSSFTIGDGVTSTLIFAAACASAGITVLIDNDLGN-CNENH 153

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPS 151
           C ++  +  MAF+ W  ++ S L N W L S
Sbjct: 154 CVQFETATGMAFICWFTTVPSFLLNFWSLAS 184


>Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-21736310 |
           20130731
          Length = 185

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 1/151 (0%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M +  G  GT   L+LR+ Q + ++A+L  M+   +F S T+FCFLV   GL   WS  L
Sbjct: 35  MKDIQGMPGTIGGLALRVSQFVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIAL 94

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A+ D Y+ LV+  ++   ++    +GD                      N  G+ C    
Sbjct: 95  AITDVYAILVRRSLQNYRLVSSFTIGDGVTSTLIFAAACASAGITVLIDNDLGN-CNENH 153

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPS 151
           C ++  +  MAF+ W  ++ S L N W L S
Sbjct: 154 CVQFETATGMAFICWFTTVPSFLLNFWSLAS 184


>Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-16322113 |
           20130731
          Length = 152

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 75/151 (49%)

Query: 1   MDEFPGSVGTSASLSLRLGQTICSSASLLFMSLGVEFYSYTSFCFLVTIMGLVIPWSFTL 60
           M  F G+ GT   L LR+ Q I ++ S+  ++    F+ YTSFCFL+  M L I WSF L
Sbjct: 1   MKNFSGTPGTVLGLILRMSQFIFATGSIASIATTPSFFYYTSFCFLIASMALQIIWSFVL 60

Query: 61  AVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXXXXXXXXXXXXXXXXNSDGSFCPIKF 120
           A++D Y+ L K  +  P ++ + +VGDW                     +  G     + 
Sbjct: 61  ALLDAYALLKKKVLLNPVLISLFVVGDWVTATISLAAASASAGLTVLYFHDMGHCHFGEE 120

Query: 121 CCRYRISAVMAFLTWSLSLASSLFNLWLLPS 151
           C +Y+IS   AF++W     SSL  LWL+ +
Sbjct: 121 CQKYQISVAFAFMSWISISISSLIMLWLIAA 151


>Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-32903328 |
           20130731
          Length = 151

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 53/115 (46%)

Query: 36  EFYSYTSFCFLVTIMGLVIPWSFTLAVVDGYSTLVKCPVRQPGILLIIIVGDWXXXXXXX 95
           + Y+    C+LV  MGL   WSF LA++D Y+ + K  +  P ++ + +VGDW       
Sbjct: 35  DRYTQVKTCYLVAAMGLQAIWSFLLALMDAYAVVRKKVLHNPALVSLYLVGDWVSATLSL 94

Query: 96  XXXXXXXXXXXXXXNSDGSFCPIKFCCRYRISAVMAFLTWSLSLASSLFNLWLLP 150
                         +  G     + C  Y+IS   AFL+W  +  SSL  LWLL 
Sbjct: 95  AAACSSAGIIVLYFHDLGHCYFGEKCRSYQISVGFAFLSWIPTSISSLIMLWLLA 149