Miyakogusa Predicted Gene
- Lj4g3v0878860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0878860.1 Non Characterized Hit- tr|F6HA22|F6HA22_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.77,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,NODE_57246_length_1217_cov_19.037798.path2.1
(307 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 285 3e-77
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 126 3e-29
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 3e-24
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 108 8e-24
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 107 1e-23
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 104 1e-22
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 2e-22
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 102 5e-22
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 6e-22
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 1e-21
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 100 2e-21
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 2e-21
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 4e-21
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 4e-21
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 5e-21
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 5e-21
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 99 5e-21
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 1e-20
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 97 2e-20
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 2e-20
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 95 7e-20
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 7e-20
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 95 1e-19
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 1e-19
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 94 1e-19
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 94 2e-19
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 3e-19
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 93 3e-19
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 3e-19
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 3e-19
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 93 3e-19
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 4e-19
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 4e-19
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 92 5e-19
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 7e-19
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 92 7e-19
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 9e-19
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 91 1e-18
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 91 1e-18
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 2e-18
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 90 2e-18
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 2e-18
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 90 3e-18
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 90 3e-18
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 90 3e-18
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 90 3e-18
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 4e-18
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 89 4e-18
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 89 5e-18
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 89 6e-18
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-18
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 89 6e-18
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 89 6e-18
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 89 6e-18
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 7e-18
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 89 7e-18
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 8e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 9e-18
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 87 2e-17
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 3e-17
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 86 4e-17
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 86 4e-17
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 86 4e-17
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 86 4e-17
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 86 5e-17
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 85 7e-17
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 85 8e-17
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 85 1e-16
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 85 1e-16
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 1e-16
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 84 1e-16
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 83 3e-16
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 83 4e-16
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 82 5e-16
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 6e-16
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 82 6e-16
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 82 6e-16
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 82 8e-16
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 82 9e-16
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 81 1e-15
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 81 1e-15
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 1e-15
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 81 1e-15
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 80 3e-15
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 3e-15
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 80 3e-15
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 4e-15
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 79 4e-15
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 79 5e-15
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 7e-15
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 78 9e-15
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 78 1e-14
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 78 1e-14
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 1e-14
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 1e-14
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 77 2e-14
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 77 2e-14
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 76 3e-14
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 4e-14
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 75 5e-14
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 75 7e-14
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 75 7e-14
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 75 9e-14
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 74 1e-13
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 74 1e-13
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 74 1e-13
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 74 1e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 74 1e-13
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 74 2e-13
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 73 3e-13
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 73 4e-13
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 73 4e-13
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 72 5e-13
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 72 5e-13
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 5e-13
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 72 5e-13
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 72 5e-13
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 72 5e-13
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 72 7e-13
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 72 8e-13
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 72 8e-13
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 8e-13
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 8e-13
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 2e-12
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-12
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 70 2e-12
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 2e-12
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 70 3e-12
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 68 1e-11
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 67 3e-11
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 3e-11
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 66 4e-11
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 66 5e-11
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 66 5e-11
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 66 5e-11
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 66 5e-11
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 65 6e-11
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 65 6e-11
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 65 1e-10
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 65 1e-10
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 65 1e-10
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-10
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 65 1e-10
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 65 1e-10
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 64 1e-10
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 64 2e-10
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 64 2e-10
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 64 2e-10
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 64 2e-10
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 63 3e-10
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 63 4e-10
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 62 5e-10
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 62 6e-10
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 62 6e-10
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 62 6e-10
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 62 1e-09
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 1e-09
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 61 1e-09
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 61 1e-09
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 61 1e-09
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-09
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 61 2e-09
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 60 2e-09
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-09
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 60 4e-09
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 60 4e-09
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 60 4e-09
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 60 4e-09
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 60 4e-09
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 59 5e-09
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 59 5e-09
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 59 6e-09
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 59 6e-09
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 59 7e-09
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 59 7e-09
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 59 7e-09
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 59 8e-09
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 59 9e-09
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 58 1e-08
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 58 1e-08
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 58 1e-08
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 57 3e-08
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 57 3e-08
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 56 3e-08
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 56 4e-08
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 56 4e-08
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 56 5e-08
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 6e-08
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 6e-08
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 7e-08
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 55 7e-08
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 55 8e-08
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 55 8e-08
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-07
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 55 1e-07
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 55 1e-07
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 55 1e-07
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 54 1e-07
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 54 1e-07
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 54 1e-07
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 54 2e-07
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 54 2e-07
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 54 3e-07
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 53 4e-07
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 53 4e-07
Medtr7g005780.1 | PPR containing plant protein | HC | chr7:35224... 53 4e-07
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 52 5e-07
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 52 5e-07
Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 52 5e-07
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 52 5e-07
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 52 6e-07
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 52 7e-07
Medtr7g069270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 8e-07
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 52 8e-07
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 9e-07
Medtr7g069290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 1e-06
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 1e-06
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-06
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 50 2e-06
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 50 3e-06
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 50 3e-06
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 50 4e-06
Medtr1g022360.1 | nuclear fusion defective-like protein | HC | c... 49 4e-06
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 49 5e-06
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 5e-06
Medtr4g081220.1 | PPR containing plant-like protein | HC | chr4:... 49 6e-06
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 49 6e-06
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 49 7e-06
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 49 7e-06
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 49 7e-06
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 49 7e-06
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 7e-06
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 49 8e-06
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 49 8e-06
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 49 8e-06
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 49 8e-06
Medtr7g100550.1 | PPR containing plant-like protein | HC | chr7:... 49 9e-06
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 48 9e-06
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/326 (49%), Positives = 207/326 (63%), Gaps = 39/326 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RGLSP+E TY++L ++ +C G ++ + +M+ +G +P S+VTYN
Sbjct: 363 RGLSPNERTYTTL-------VDGFCRQGLMNEAYKVLSEMVDSGFVP-------SVVTYN 408
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
AL+ G+C LGRVEEA+G+L+ M E GL PD VSY+ VIS FCR E GKA+++K+EM EK
Sbjct: 409 ALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEK 468
Query: 124 RILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEK 161
RIL + V Y SL+QGL DE Y++LMN Y +G++ K
Sbjct: 469 RILP-DAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSK 527
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A L E+ G+L + VT SV INGL+KKARTREAK++LL + + S TY+ L
Sbjct: 528 ALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDE--SVPNDVTYETL 585
Query: 222 IENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
IENCS NEFKS+V LVKGF M+GL+ EA R +TM N KPDG VYN +I HCR NV
Sbjct: 586 IENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNV 645
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
KAYNMYT MVH GFV HM +V+ALI
Sbjct: 646 RKAYNMYTEMVHCGFVSHMVTVIALI 671
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 45/310 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y ++IN C G ++ + ++M G+ SP VTYN L+ G+C G +A
Sbjct: 266 SYNAVINGLCGQGRMNETMEVIEEMSLKGL-------SPDCVTYNTLVNGFCKDGNFHQA 318
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L +L M GLSP+ V+Y +I+G C+++ +A E+ M ++
Sbjct: 319 LVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDR--------------- 363
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
GLS +E Y++L++ + QG M +AY + E+ G++ VT + +NG R EA
Sbjct: 364 GLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEA 423
Query: 198 KEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKS-------LVE------------LV 237
+L M+ +Y +I C N E +VE L+
Sbjct: 424 VGVLKDMVERGLFPDV--VSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLI 481
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+G + +SEA ML PD Y L+ +C + KA +++ M+ GF+
Sbjct: 482 QGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFL 541
Query: 298 PHMFSVLALI 307
P + + LI
Sbjct: 542 PDVVTYSVLI 551
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 40/285 (14%)
Query: 46 NGVLPDFVTG--SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISG 103
N V D V SP++ TYN +I G +GR + L + M G P+ V+YN +ISG
Sbjct: 179 NRVFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISG 238
Query: 104 FCRIREPGKAYELKMEMDEKRIL-----------------RME---EVVYESLMQGLS-D 142
+C+ + +A+ L M KR+ RM EV+ E ++GLS D
Sbjct: 239 YCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPD 298
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++L+N + G+ +A +L E++ G VT + ING+ K A EI L
Sbjct: 299 CVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEI-L 357
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
S++ + LS NE ++ LV GF +GL++EA + M+
Sbjct: 358 SLMRDRGLSP---------------NE-RTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFV 401
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P YN L+ C V++A + MV G P + S +I
Sbjct: 402 PSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVI 446
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 28/216 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML RGLSPDE TY++L +N YC+ GE SK +LHD+M+ G L P +V
Sbjct: 500 MLGRGLSPDEVTYTTL-------MNGYCVEGELSKALDLHDEMMQKGFL-------PDVV 545
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISG-----FCRIREPGKAYE 115
TY+ LI G R EA +L + P+ V+Y +I F + K +
Sbjct: 546 TYSVLINGLNKKARTREAKKLLLKLFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFC 605
Query: 116 LKMEMDEKRILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+K MDE + V+E++ Q D Y+ +++ + G++ KAY + E+ H G
Sbjct: 606 MKGLMDEA------DRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNMYTEMVHCG 659
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
++S VT I LSK+ E ++ +++ NSC
Sbjct: 660 FVSHMVTVIALIKALSKEGMNDELSSVMQNIL-NSC 694
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 47/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +GL PDE TY+ +LI+ YC GE + ++H+QM+ G+ +P++V
Sbjct: 408 MLVKGLEPDEVTYT-------ALIDGYCKAGEMKEAFSVHNQMVQKGL-------TPNVV 453
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY AL G C G ++ A +L M GL P+ +YN +++G C+I + +L EM
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D L D Y++LM+ Y G+M KA+ L R + + VT
Sbjct: 514 D--------------LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+V +NG + + ++ M+ + TT+++L++ C N ++ E+ K
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA--TTFNSLMKQYCIKNNMRATTEIYKA 617
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
RG++ PD YN LI HC+ +N+ +A+ ++ MV G+
Sbjct: 618 MHDRGVM----------------PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 50/313 (15%)
Query: 28 CLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE 87
C GE KV L D++ G+ PD YN +I C G V EA +LRGM +
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPD-------EYIYNNIILLLCKNGEVVEAEQLLRGMRK 340
Query: 88 MGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI--------------------LR 127
G+ PD V Y VISGFC++ A +L EM K+I +
Sbjct: 341 WGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVE 400
Query: 128 MEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
E+ E L++GL DE Y++L++ Y G+M++A+ + ++ G VT + +
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL 245
GL K A E+L M S L + TY+ ++ C + V+L++ + G
Sbjct: 461 GLCKNGEIDVANELLHEM-SRKGLQPNVY-TYNTIVNGLCKIGNIEQTVKLMEEMDLAGF 518
Query: 246 ----------------VSEAARAHD---TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ E A+AH+ ML+ +P +N L+ C ++
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578
Query: 287 MYTRMVHYGFVPH 299
+ M+ G +P+
Sbjct: 579 LIEWMLEKGIMPN 591
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 40/265 (15%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+ N +++ C LG+V EA +L M + G PD VSY +V+SG+CRI E K +L E
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302
Query: 120 MDEKRILRMEEVVY----------------ESLMQGL------SDEDAYSSLMNDYLAQG 157
+ K L+ +E +Y E L++G+ D Y+++++ + G
Sbjct: 303 LKGKG-LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
++ A L E+ + + VT + I+G+ K + EA+E+ M+ + T
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL--EPDEVT 419
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
Y ALI+ G+ G + EA H+ M+ P+ Y L C+
Sbjct: 420 YTALID---------------GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFS 302
+D A + M G P++++
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYT 489
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 9 DEGTYSSLFNAYFSLI--NAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
D G++ +F+ YF ++ N + L + L +++ GV+ + + L +
Sbjct: 166 DWGSHPLVFDLYFQVLVENGFVLEAQ-----KLFHKLLRYGVVVSVDSCNLFLSRLS--- 217
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK--- 123
C ++ A+ + PE+G+ + VS NIV+ C++ + +A+ L ++M ++
Sbjct: 218 ---CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNF 274
Query: 124 --------------RILRMEEV---VYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYIL 165
RI +++V V E +GL DE Y++++ G++ +A L
Sbjct: 275 PDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL 334
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC 225
R + G ++V + I+G K L +S +C +D +
Sbjct: 335 LRGMRKWGVFPDNVVYTTVISGFCK-----------LGNVSAAC------KLFDEMRRKK 377
Query: 226 SNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
+ + ++ G G + EA + ML +PD Y LI +C+ + +A+
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 286 NMYTRMVHYGFVPHMFSVLAL 306
+++ +MV G P++ + AL
Sbjct: 438 SVHNQMVQKGLTPNVVTYTAL 458
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +G+ P+ T++SL + YC+ + ++ M GV+PD
Sbjct: 583 MLEKGIMPNATTFNSL-------MKQYCIKNNMRATTEIYKAMHDRGVMPD-------SN 628
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C ++EA + + M E G S A +Y+ +I GF + ++ +A +L EM
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Query: 121 DEKRILRMEEVVYE 134
K L E+ +Y+
Sbjct: 689 -RKHGLVAEKDIYD 701
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 149/353 (42%), Gaps = 75/353 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAY---------------------------FS-LINAYCLGGE 32
M+ +G+SPD TYS+L + + F+ L+NA+C G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + D M+ G+ P+FVT YN+L+ GYC + V +A I M + G++P
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVT-------YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED-------- 144
D SY+I+I+GFC+I++ +A L EM K I+ + V Y SL+ GLS
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYALQL 422
Query: 145 --------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
Y+S+++ ++KA L ++ G T S+ I GL +
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ +A+++ ++ L+ N + +++GF + GL +EA
Sbjct: 483 SGKLEDARKV-----------------FEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
M PD Y +I+ + D A + M+ G P ++
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T+++L I CL G+ + HD+++ G D +
Sbjct: 146 ILKMGYVPDTITFTTL-------IKGLCLKGQIQQAFLFHDKVVALGFHFD-------QI 191
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI+G C +G AL +L+ + + P+ V YN +I C+++ +A++L EM
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
K G+S D YS+L++ + G + A L ++ + +
Sbjct: 252 ISK---------------GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVY 296
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T ++ +N K + +E K + M+ K TY++L++ G
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGI--KPNFVTYNSLMD---------------G 339
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM G PD Y+ +I C+ K D+A N++ M +P
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 400 VVTYSSLI 407
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 115/270 (42%), Gaps = 32/270 (11%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P +N ++ L + + M G+ P+ V+ NI+I+ FC++ A+
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ +IL+M V D +++L+ +G +++A++ ++ G+
Sbjct: 142 V-----FAKILKMGYV---------PDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187
Query: 176 SESVTESVFINGLSKKARTREAKEILL---------------SMISNSCLSKTTHTTYDA 220
+ ++ I+GL K TR A ++L ++I + C K + +D
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 221 LIENCSNNEFKSLVE---LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
E S +V L+ GF + G +++A + M+ N KPD +N L+ C+
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + ++ M+ G P+ + +L+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G PD TY+ SLI+ C GEF K + QMI SP+ V
Sbjct: 298 MIEKGFDPDVYTYN-------SLISGMCKLGEFEKAIEILQQMI-------LRECSPNTV 343
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI C +E A + R + GL PD ++N +I G C + A E+ EM
Sbjct: 344 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 403
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K DE YS L++ + +++A +L +E+ G +V
Sbjct: 404 KNKGC--------------KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 449
Query: 181 ESVFINGLSKKARTREAKEILLSM----ISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
+ I+GL K R +A+EI M +S S TY+ LI+ C N
Sbjct: 450 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS------SVTYNTLIDGLCKNKR------ 497
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
V EA++ D M+ KPD YN L+ CR +++KA ++ M G
Sbjct: 498 ----------VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 547
Query: 296 FVPHMFSVLALI 307
P +F+ LI
Sbjct: 548 CEPDIFTYGTLI 559
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 148/346 (42%), Gaps = 69/346 (19%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G SPD+ T++SL +N +C G + ++ D MI G PD + TYN+
Sbjct: 267 GFSPDQVTFNSL-------VNGFCRIGNVNDALDIVDFMIEKGFDPD-------VYTYNS 312
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G C LG E+A+ IL+ M SP+ V+YN +IS C+ E A +L + K
Sbjct: 313 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 372
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
+L + + +L+QGL DE YS L++ + +++A
Sbjct: 373 LLP-DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 431
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM----ISNSCLSKTTHTTY 218
+L +E+ G +V + I+GL K R +A+EI M +S S TY
Sbjct: 432 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS------SVTY 485
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGL----------------VSEAARAHD---TMLH 258
+ LI+ C N + +L+ M GL V + +A D TM
Sbjct: 486 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 545
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV--PHMFS 302
+PD Y LI CR VD A + + G V PH ++
Sbjct: 546 NGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 591
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 131/325 (40%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD Y+ NA + V LH +M++ G++ D + T+N
Sbjct: 127 GFKPDTNFYNIALNALVE-------DNKLKLVEMLHSKMVNEGIVLD-------VSTFNV 172
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM---- 120
LI C ++ A+ +L M GL PD +++ ++ GF + A ++K +M
Sbjct: 173 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 232
Query: 121 ----------------DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAY 163
E R+ V E +G S D+ ++SL+N + G++ A
Sbjct: 233 CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 292
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+ + G+ + T + I+G+ K +A EIL MI C T TY+ LI
Sbjct: 293 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT--VTYNTLIS 350
Query: 224 N-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
C NE ++ +L + +GL+ PD +N LI C KN D
Sbjct: 351 ALCKENEIEAATDLARILVSKGLL----------------PDVCTFNTLIQGLCLSKNQD 394
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
A M+ M + G P F+ LI
Sbjct: 395 IAMEMFEEMKNKGCKPDEFTYSILI 419
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 119/304 (39%), Gaps = 63/304 (20%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
F ++ L Q+ +G +P+ T+ LI + +E L IL E+G P
Sbjct: 80 FDSITTLLKQLKSSGSIPN-------ATTFATLIQSFTNFHEIENLLKILEN--ELGFKP 130
Query: 93 DAVSYNIVISGFCR-----------------------------IREPGKAYELKMEMDEK 123
D YNI ++ I+ KA++L+
Sbjct: 131 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR-----P 185
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
IL +EE+ L DE +++LM ++ +GD+ A + +++ G L +V+ V
Sbjct: 186 AILMLEEMANHGLK---PDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV 242
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
+NG K+ R EA +L +S S T+++ LV GF
Sbjct: 243 LVNGFCKEGRVEEALRFVLE-VSEEGFSP-DQVTFNS---------------LVNGFCRI 285
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
G V++A D M+ PD YN LI C+ +KA + +M+ P+ +
Sbjct: 286 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 345
Query: 304 LALI 307
LI
Sbjct: 346 NTLI 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI+ C + S L DQMI G+ PD TYN+L+ +C +G +E+A
Sbjct: 484 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD-------KFTYNSLLTYFCRVGDIEKA 536
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
I++ M G PD +Y +I G CR A +L R ++M+ +V
Sbjct: 537 GDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL------LRSVQMKGIVLTP--- 587
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK-KARTREA 197
AY+ ++ + ++ L RE+ +++T + GL +EA
Sbjct: 588 -----HAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEA 642
Query: 198 KEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSE 248
+ + M+ L + ++ L E CS + +L+EL+ + +SE
Sbjct: 643 IDFTVEMLEKGILPE--FPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE 692
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 85/209 (40%), Gaps = 59/209 (28%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL PD+ TY+SL YF C G+ K ++ M NG PD +
Sbjct: 508 MIMEGLKPDKFTYNSLL-TYF------CRVGDIEKAGDIVQTMASNGCEPD-------IF 553
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGL------------------------------ 90
TY LI G C GRV+ A +LR + G+
Sbjct: 554 TYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 613
Query: 91 -----SPDAVSYNIVISGFCRIREP-GKAYELKMEMDEKRILRMEEVVYESLMQG---LS 141
PDA+++ IV G C P +A + +EM EK IL E + L +G LS
Sbjct: 614 MEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP-EFPSFGFLAEGLCSLS 672
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIA 170
ED L+N MEKA + +RE +
Sbjct: 673 MEDTLIELINMV-----MEKAQMSERETS 696
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 75/345 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAY---------------------------FS-LINAYCLGGE 32
M+ +G+SPD TYS+L + + F+ L+NA+C G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + D M+ G+ P+FVT YN+L+ GYC + V +A I M + G++P
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVT-------YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED-------- 144
D SY+I+I+GFC+I++ +A L EM K I+ + V Y SL+ GLS
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYALQL 422
Query: 145 --------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
Y+S+++ ++KA L + G+ + T S+ I GL +
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ +A+++ ++ L+ N + + +++GF + GL +EA
Sbjct: 483 SGKLEDARKV-----------------FEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
M PD Y +I+ + D A + M+ G
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T+++L CL G+ + HD+++ G D +
Sbjct: 146 ILKMGYVPDTITFTTL-------SKGLCLKGQIQQAFLFHDKVVALGFHFD-------QI 191
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI+G C +G AL +L+ + + P+ V YN +I C+++ +A++L EM
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
K G+S D YS+L++ + G ++ A L ++ + +
Sbjct: 252 VSK---------------GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVY 296
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T ++ +N K + +E K + M+ K TY++L++ G
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGI--KPNFVTYNSLMD---------------G 339
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM G PD Y+ +I C+ K D+A N++ M +P
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 400 VVTYSSLI 407
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 135/310 (43%), Gaps = 45/310 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +LI+ C GE +L ++ N V P++V YN +I C + V EA
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLV-------QPNVVMYNTIIDSMCKVKLVNEA 244
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KMEMDEKR-------IL--- 126
+ M G+SPD V+Y+ +ISGFC + + A +L KM ++ + IL
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304
Query: 127 -----RMEE--VVYESLM-QGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+M+E V++ +M QG+ Y+SLM+ Y ++ KA + +A G +
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
+ S+ ING K + EA + M + + TY +LI+
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV--VTYSSLID-------------- 408
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G G +S A + D M P+ YN ++ C+ VDKA + T+ GF
Sbjct: 409 -GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467
Query: 298 PHMFSVLALI 307
P + + LI
Sbjct: 468 PDISTYSILI 477
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P +N ++ L + + M G+ P+ V+ NI+I+ FC++ A+
Sbjct: 82 TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ +IL+M V D +++L +G +++A++ ++ G+
Sbjct: 142 V-----FAKILKMGYV---------PDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187
Query: 176 SESVTESVFINGLSKKARTREAKEILL---------------SMISNSCLSKTTHTTYDA 220
+ ++ I+GL K TR A ++L ++I + C K + +D
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 221 LIENCSNNEFKSLVE---LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
E S +V L+ GF + G + +A + M+ N KPD +N L+ C+
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + ++ M+ G P+ + +L+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 52/328 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L GL P+ TY++L I+ C G+ K D+M++ G++ S+
Sbjct: 313 LLESGLVPNAVTYNAL-------IDGCCNKGDLDKAFAYRDEMMNRGIVA-------SVF 358
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI+ R+EEA +++ M E G+ PD V+YNI I+G+CR KA L EM
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 121 DEK--------------------RILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDM 159
EK R+ EE +S+ +G L D +++L++ + G++
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
++A+ L +E+ + + + VT + + G ++ + EAK++L M K H +Y+
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI--KPDHISYN 536
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
LI G+ RG + +A D ML P YN LI + +
Sbjct: 537 TLIS---------------GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIG 581
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D A + M G P + L +I
Sbjct: 582 EADHAEELLREMQSKGITPDDSTYLYVI 609
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P+ TY+++ IN YCL G+F S + M + PD TYN+
Sbjct: 247 GVKPNVVTYNTV-------INGYCLRGKFEAASKIFKTMKDKNLKPD-------CYTYNS 292
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD--- 121
I C R+EEA G+L + E GL P+AV+YN +I G C + KA+ + EM
Sbjct: 293 FISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRG 352
Query: 122 -----------------EKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAY 163
EKRI E+++ E +G+ D Y+ +N Y G+ +KA
Sbjct: 353 IVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKAL 412
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
L E+ T + I+ K+ R EA+E I L ++ALI+
Sbjct: 413 SLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDI--IMFNALID 470
Query: 224 -NCSNNEFKSLVELVK-------------------GFRMRGLVSEAARAHDTMLHGNHKP 263
+C N +L+K G+ V EA + D M KP
Sbjct: 471 GHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP 530
Query: 264 DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D YN LI + + ++ A ++ M+ GF P + + ALI
Sbjct: 531 DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 39/280 (13%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---------RIR 108
S+VT+N +I C G+ ++A + M G+ P+ V+YN VI+G+C +I
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF 275
Query: 109 EPGKAYELKME-----------MDEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQ 156
+ K LK + E+RI V+ + L GL + Y++L++ +
Sbjct: 276 KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK 335
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM------------ 204
GD++KA+ E+ + G ++ T ++ I+ L + R EA++++ M
Sbjct: 336 GDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTY 395
Query: 205 ---ISNSCL---SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
I+ C +K + +D ++E ++ L+ F R +SEA +
Sbjct: 396 NIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK 455
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
PD ++N LI HC N+D+A+ + M + VP
Sbjct: 456 EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVP 495
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
++ A + M +M + V++NI+I+ CR + KA + M+ VY
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHME----------VYG 247
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
++ Y++++N Y +G E A + + + + T + FI+ L K+ R
Sbjct: 248 VKPNVVT----YNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRI 303
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSN-----NEFKSLVE-------------- 235
EA +L ++ + + TY+ALI+ C N F E
Sbjct: 304 EEASGVLCKLLESGLVPNA--VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361
Query: 236 -LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
L+ + + EA M +PD YN I +CRC N KA +++ MV
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK 421
Query: 295 GFVPHMFSVLALI 307
P + + +LI
Sbjct: 422 NIRPTVETYTSLI 434
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
+++++S +C+ R+P +A E M E I+ E L L
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLL--------------LKL 195
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
++ A+ + E+ S VT ++ IN L ++ + ++AK+ + M K
Sbjct: 196 NKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGV--KPNVV 253
Query: 217 TYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
TY+ +I G+ +RG A++ TM N KPD YN I C
Sbjct: 254 TYNTVI---------------NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLC 298
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + +++A + +++ G VP+ + ALI
Sbjct: 299 KERRIEEASGVLCKLLESGLVPNAVTYNALI 329
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 145/355 (40%), Gaps = 71/355 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
+L RGL P TY L +N C G+FS + D+MI G++P+ V +
Sbjct: 114 LLSRGLLPTLITYGIL-------LNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIR 166
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P+L TY LI GYC G V+ I M GL P
Sbjct: 167 VFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHP 226
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V++ I++ C++ + A + MD+ V+ +L Y+ L++
Sbjct: 227 DVVTFAILVDVLCKVGDLEAARNCFVYMDKFG-------VFPNLY-------VYNCLIDG 272
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
Y GD+ +A L E+ +G + T S+ + GL R EAK ++ M +
Sbjct: 273 YCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFAN 332
Query: 213 TTHTTYDALIEN-CSNNEFKSLVE-------------------LVKGFRMRGLVSEAARA 252
TY+A+I+ C + + +E L+ GF +G + A
Sbjct: 333 A--VTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGL 390
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ M+ PD Y LI HC+ +N A+ ++ M+ G P++ +V +LI
Sbjct: 391 YIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLI 445
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 39/308 (12%)
Query: 11 GTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYC 70
G + +L+ Y LI+ YC G+ + L D+M NGV D T S L+ G C
Sbjct: 258 GVFPNLY-VYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCS-------ILVKGLC 309
Query: 71 FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
GR EEA ++ M + G+ +AV+YN VI G+C++ + KA E+ +M E++I
Sbjct: 310 DSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKI-EPNV 368
Query: 131 VVYESLMQG----------------------LSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
+ + +L+ G + D Y++L++ + + + A+ L +E
Sbjct: 369 ITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKE 428
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS-NSCLSKTTHTTYDALIENCSN 227
+ G VT + I+GL K+ +T A ++ L S KT H+ CS
Sbjct: 429 MMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSGV------CSP 482
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
NE L++G G + +A + M KPD +Y ++ H R K++ +
Sbjct: 483 NEV-MYAALIQGLCKDGRIFKATKFFKDMRCSGFKPDMVLYVIMLEAHFRFKHMFDVMML 541
Query: 288 YTRMVHYG 295
+ M+ G
Sbjct: 542 HADMLKTG 549
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 66/304 (21%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------------------ 54
Y +LI +C+ G+ + +L ++MI V P+ T
Sbjct: 315 TYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVM 374
Query: 55 ----GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
+P+++TY+ L+YGYC + V EA I + M + G++ D +SY I+IS FC+I+
Sbjct: 375 MEKDVTPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMV 434
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDED----------------------AYSS 148
+A +L EM K+I + V Y SL+ GL + YSS
Sbjct: 435 DEARKLFEEMQSKQIFP-DVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSS 493
Query: 149 LMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
+++ L + +E+A L +E G T ++FI+GL K R +A E+ ++ NS
Sbjct: 494 ILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNS 553
Query: 209 CLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
N + N++ V ++ GF +GL EA M + PD Y
Sbjct: 554 --------------YNHNRNKYTWTV-MIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTY 598
Query: 269 NFLI 272
+I
Sbjct: 599 KTII 602
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD T+++L IN YCL GE ++ +D+++ G + ++Y
Sbjct: 133 GYHPDVVTFNTL-------INGYCLKGENDELLRFYDKVVGLGF-------QLNQISYGT 178
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI C G EAL +LR + + P V YN++I C+ + A++L EM KR
Sbjct: 179 LINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKR 238
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I + Y +L+ GL G ++ A L + + + T ++
Sbjct: 239 I-SPNVITYNTLLHGLC-------------IVGQLKDAISLFKIMVSENINPTVYTFNIL 284
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
++G K+ + ++AK +L M+ K TY LI +GF + G
Sbjct: 285 VDGFCKEGKVKDAKVVLAVMMKAGV--KLNAVTYSTLI---------------RGFCIVG 327
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ EA + M+ G P+ + L+ C+ + +DKA + M+ P++ +
Sbjct: 328 KLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYS 387
Query: 305 ALI 307
L+
Sbjct: 388 CLL 390
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 131/319 (41%), Gaps = 63/319 (19%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------------------ 54
+Y +LIN C GGE + L Q+ V P V
Sbjct: 175 SYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEM 234
Query: 55 ----GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
SP+++TYN L++G C +G++++A+ + + M ++P ++NI++ GFC+
Sbjct: 235 LAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCK---E 291
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA--YSSLMNDYLAQGDMEKAYILDRE 168
GK + K VV +M+ +A YS+L+ + G +++A L +
Sbjct: 292 GKVKDAK-------------VVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNK 338
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
+ T ++ ++ K+ + +A +L M+ T + + +C
Sbjct: 339 MILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKD-------VTPNVITYSC--- 388
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
L+ G+ + V+EA R +M D Y +I + C+ K VD+A ++
Sbjct: 389 -------LLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLF 441
Query: 289 TRMVHYGFVPHMFSVLALI 307
M P + + +L+
Sbjct: 442 EEMQSKQIFPDVVTYSSLV 460
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 40/274 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P+LVT+N L+ Y LG++ A +L + ++G PD V++N +I+G+C
Sbjct: 100 KPNLVTFNILLNCYSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLINGYC---------- 149
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
LK E DE +LR + V Q ++ +Y +L+N G+ +A L R++ DG L
Sbjct: 150 LKGENDE--LLRFYDKVVGLGFQ--LNQISYGTLINKLCKGGETREALQLLRQV--DGKL 203
Query: 176 SES--VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKS 232
+ V +V I+ + K A ++ M++ TY+ L+ C + K
Sbjct: 204 VQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNV--ITYNTLLHGLCIVGQLKD 261
Query: 233 LVELVK-------------------GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
+ L K GF G V +A M+ K + Y+ LI
Sbjct: 262 AISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIR 321
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C + +A +++ +M+ P++++ L+
Sbjct: 322 GFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILV 355
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 32/241 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++ D +Y+ + I+ +C + L ++M + PD +V
Sbjct: 409 MTQRGVTFDVLSYTIM-------ISKFCKIKMVDEARKLFEEMQSKQIFPD-------VV 454
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ G C R+ AL ++ M + G P+ +Y+ ++ + + +A EL E
Sbjct: 455 TYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEF 514
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY--LSES 178
+K I + VY Y+ ++ G +E A+ + ++ + Y
Sbjct: 515 KDKGI---QPNVY-----------TYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNK 560
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTT--HTTYDALIENCSNNEFKSLVEL 236
T +V I+G +K EA +L +M NSC+ T T +L++ ++ + L EL
Sbjct: 561 YTWTVMIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTYKTIISSLLDKGEKDKARKLCEL 620
Query: 237 V 237
+
Sbjct: 621 I 621
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + + PD TYSSL ++ C L D+M G P++
Sbjct: 444 MQSKQIFPDVVTYSSL-------VDGLCKSERIPNALKLVDEMHDRG-------QPPNIF 489
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++++ +VEEA+ + + + G+ P+ +Y I I G C+ A+E+
Sbjct: 490 TYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEV---- 545
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E+++ S ++ ++ +++ + +G ++A L + + + ++VT
Sbjct: 546 -------FEDLLVNSYNHN-RNKYTWTVMIHGFCRKGLFDEALTLLSNMKDNSCIPDTVT 597
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
I+ L K +A++ L +I++ + T + ++I N
Sbjct: 598 YKTIISSLLDKGEKDKARK-LCELIASGNFTNTNFIVFVSVISN 640
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG D TY++L +N C G L +M+ GV PDF T
Sbjct: 439 MVERGCVMDVVTYNTL-------LNGLCRGKMLDDADELFKEMVERGVFPDFYT------ 485
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
LI+GYC G + +AL + M L PD V+YN ++ GFC++ E KA EL +M
Sbjct: 486 -LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM 544
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ I + S + ++S L+N + + G + +A+ L E+ G VT
Sbjct: 545 ISREI-------FPSYI-------SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 590
Query: 181 ESVFINGLSKKARTREAKEILLSMISN----SCLSKTT-------HTTYDALIENCSNNE 229
+ I G + +A + L +MIS C++ T +D +N E
Sbjct: 591 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 650
Query: 230 FKSLVE-------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
+ L+ ++ GF G + EA M+ PD Y LI + N+
Sbjct: 651 ERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 710
Query: 283 KAYNMYTRMVHYGFVP 298
+A+ ++ M+ GFVP
Sbjct: 711 EAFRVHDEMLQRGFVP 726
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 142/329 (43%), Gaps = 54/329 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML GL P+ T++ + L+ + C + + + ++M+ GV+PD L+
Sbjct: 334 MLGVGLCPNAATFNPM------LVES-CRKEDVWEAERVFNEMLQRGVVPD-------LI 379
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
++++++ + G + AL M +GL PD V Y I+I+G+CR + A +++ EM
Sbjct: 380 SFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEM 439
Query: 121 DEKRILRMEEVVYESLMQGL--------SDE------------DAYS--SLMNDYLAQGD 158
E+ + M+ V Y +L+ GL +DE D Y+ +L++ Y G+
Sbjct: 440 VERGCV-MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 498
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
M KA L + + VT + ++G K +AKE+ MIS
Sbjct: 499 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP------- 551
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ S L+ GF GLVSEA R D M KP N +I + R
Sbjct: 552 ----------SYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 601
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N+ KA + M+ G P + LI
Sbjct: 602 GNLSKANDFLNTMISEGVPPDCITYNTLI 630
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 56/287 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+ PD F +LI+ YC G +K +L + M + PD +V
Sbjct: 474 MVERGVFPD-------FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPD-------VV 519
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ G+C +G +E+A + M + P +S++I+I+GFC + +A+ L EM
Sbjct: 520 TYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM 579
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
EK I + V ++++G D Y++L+N ++ + +
Sbjct: 580 KEKGI-KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 638
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTTHTT 217
++A+ L + G L VT + + G S+ R +EA+ +L MI K+T+T+
Sbjct: 639 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 698
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
L+ G+ + + EA R HD ML PD
Sbjct: 699 ------------------LINGYVSKDNMKEAFRVHDEMLQRGFVPD 727
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 137/320 (42%), Gaps = 46/320 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
++G Y+ L Y +L+NAYC G S+ L D M G+ P L TYNALI G
Sbjct: 266 EKGVYADLV-TYNTLVNAYCRRGLVSEAFGLVDCMAGKGL-------KPGLFTYNALING 317
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL-- 126
C G E A +L M +GL P+A ++N ++ CR + +A + EM ++ ++
Sbjct: 318 LCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPD 377
Query: 127 ------------RMEE----VVYESLMQG---LSDEDAYSSLMNDYLAQGDMEKAYILDR 167
R E + Y M+G + D Y+ L+N Y D+ A +
Sbjct: 378 LISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRN 437
Query: 168 EIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
E+ G + + VT + +NGL + +A E+ M+
Sbjct: 438 EMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP---------------- 481
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+F +L L+ G+ G +++A +TM + KPD YN L+ C+ ++KA +
Sbjct: 482 -DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 540
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+ M+ P S LI
Sbjct: 541 WYDMISREIFPSYISFSILI 560
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 75/322 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ +G+SP+ TYS+L + +F++ G+ +L ++MI + PD T +
Sbjct: 250 MVSKGISPNVVTYSALISGFFTV-------GQLKDAIDLFNKMILENIKPDVYTFNILVD 302
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY +L+ GYC + V +A IL M + G++P
Sbjct: 303 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP 362
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------------ 140
D SYNI+I GFC+I++ +A L EM K I+ + V Y SL+ GL
Sbjct: 363 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVTYNSLIDGLCKLGKISYALKL 421
Query: 141 ----------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
D YSS+++ ++KA L ++ G T ++ I+GL K
Sbjct: 422 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 481
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
R +A H ++ L+ N + ++ GF +GL EA
Sbjct: 482 GGRLEDA-----------------HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 524
Query: 251 RAHDTMLHGNHKPDGGVYNFLI 272
M + PD Y +I
Sbjct: 525 TLLSKMKDNSCIPDAVTYEIII 546
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P+ T+++L I CL G+ + HD ++ G D V
Sbjct: 145 ILRMGYHPNTITFTTL-------IKGLCLKGQIHQALLFHDNVVAMGFQLD-------QV 190
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI+G C +G AL +LR + + P+ V Y+ +I G C+ + A++L EM
Sbjct: 191 GYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 250
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I VV YS+L++ + G ++ A L ++ + + T
Sbjct: 251 VSKGI--SPNVV------------TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYT 296
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++G K + +E K + M+ K TY CS L+ G+
Sbjct: 297 FNILVDGFCKDGKMKEGKTVFAMMMKQGI--KPNVVTY------CS---------LMDGY 339
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A TM PD YN LI C+ K VD+A N++ M H +P +
Sbjct: 340 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 399
Query: 301 FSVLALI 307
+ +LI
Sbjct: 400 VTYNSLI 406
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ +M+ G+ SP++VTY+ALI G+ +G++++A+
Sbjct: 227 YSTIIDGMCKDKHVNDAFDLYSEMVSKGI-------SPNVVTYSALISGFFTVGQLKDAI 279
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM-Q 138
+ M + PD ++NI++ GFC+ GK E K V+ +M Q
Sbjct: 280 DLFNKMILENIKPDVYTFNILVDGFCK---DGKMKEGK-------------TVFAMMMKQ 323
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G+ + Y SLM+ Y ++ KA + ++ G + + ++ I+G K + EA
Sbjct: 324 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 383
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ M + TY++LI+ G G +S A + D M
Sbjct: 384 MNLFKEMHHKHIIPDV--VTYNSLID---------------GLCKLGKISYALKLVDEMH 426
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD Y+ ++ C+ VDKA + T++ G P+M++ LI
Sbjct: 427 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 36/151 (23%)
Query: 4 RGLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGEFSK 35
RG+ PD TYSS+ +A Y LI+ C GG
Sbjct: 428 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 487
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
N+ + ++ G + ++ TY +I+G+C G +EAL +L M + PDAV
Sbjct: 488 AHNIFEDLLVKGY-------NITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAV 540
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
+Y I+I E KA +L+ EM + +L
Sbjct: 541 TYEIIIRSLFDKDENDKAEKLR-EMITRGLL 570
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 49/277 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++P+ T++ L ++A C G NL M+ GV+P+ +V
Sbjct: 272 MVLKNINPNVYTFNIL-------VDALCKEGNLKGAKNLLAVMMKEGVIPN-------VV 317
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++++ GYC + V +A +L + MG+ PDA SYNI+I+GFC+I+ +A+ L EM
Sbjct: 318 TYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEM 377
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
R + V Y SL+ GL D Y+SL++
Sbjct: 378 -RCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHH 436
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK------EILLS-MISNSCL- 210
++KA +L ++I G T ++ I+GL K+ R ++A+ E LLS M N C+
Sbjct: 437 VDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVP 496
Query: 211 -SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLV 246
+ T T AL EN N + +L++ RGL+
Sbjct: 497 DAVTCETIIRALFENDKNERAE---KLLREMIARGLL 530
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 40/287 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I++ C ++ L+ QMI + SP +VT+N+LIYG+C +G++ EA G+
Sbjct: 216 TIIDSLCKEKLVTEAYELYSQMIVKKI-------SPDVVTFNSLIYGFCIVGQLIEAFGL 268
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M ++P+ ++NI++ C+ A L M M+E V +++
Sbjct: 269 FHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVM-------MKEGVIPNVV---- 317
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
YSS+M+ Y ++ KA + I G ++ + ++ ING K EA +
Sbjct: 318 ---TYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLF 374
Query: 202 LSMISNSCLSKTTHT-TYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M C + +T TY +LI+ G G +S A D M
Sbjct: 375 NEM---RCRGISPNTVTYSSLID---------------GLCKLGRISYAWEFVDEMRDNG 416
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI C+ +VDKA + ++ G +M++ LI
Sbjct: 417 QPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILI 463
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 38/289 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +LIN CL G+ + + HD M+ + +F VTY LI G C +G+ EA
Sbjct: 143 TFNTLINGMCLNGKIKEALHFHDHMLAH----EFHLNQ---VTYAKLINGLCKMGKTTEA 195
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L +LR + ++ + + +N +I C+ + +AYEL +M K+I
Sbjct: 196 LQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKI------------- 242
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D ++SL+ + G + +A+ L E+ T ++ ++ L K+ + AK
Sbjct: 243 -SPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAK 301
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+L M+ + TY ++++ G+ + V++A T+
Sbjct: 302 NLLAVMMKEGVIPNV--VTYSSIMD---------------GYCLVNEVNKAKHVLSTITR 344
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN +I C+ K +++A++++ M G P+ + +LI
Sbjct: 345 MGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLI 393
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 48/278 (17%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
++ +L Q+ NG+ D VT+N LI YC LG + A I + ++G
Sbjct: 84 NNHYTAAISLSHQLELNGITAD-------TVTFNILINCYCHLGEMTFAFSIFAKILKLG 136
Query: 90 LSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAY 146
P +++N +I+G C +I+E ++ + + + +V Y L+ GL
Sbjct: 137 HHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHE----FHLNQVTYAKLINGLCK---- 188
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYL--SESVTESVFINGLSKKARTREAKEILLSM 204
G +A L R+I DG L + + + I+ L K+ EA E+ M
Sbjct: 189 ---------MGKTTEALQLLRKI--DGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQM 237
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
I + D + N L+ GF + G + EA M+ N P+
Sbjct: 238 I-------VKKISPDVVTFN----------SLIYGFCIVGQLIEAFGLFHEMVLKNINPN 280
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+N L+ C+ N+ A N+ M+ G +P++ +
Sbjct: 281 VYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVT 318
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 61/300 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ +G+SPD TYS+L I+ +C+ G+ + L ++MI + PD T S
Sbjct: 222 MVSKGISPDVVTYSAL-------ISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTY +L+ GYC + +V +A I M + G++
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS----------- 141
+ SYNI+I+GFC+I++ +A L EM K I+ + V Y SL+ GL
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP-DVVTYNSLIDGLCKSGKISYALKL 393
Query: 142 -----------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
D+ Y+S+++ ++KA L ++ +G + T ++ I+GL K
Sbjct: 394 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEA 249
R ++A+ I ++ T TY +I+ C N+ F + L+ G + A
Sbjct: 454 GGRLKDAQNIFEDLLVKG--YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNA 511
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G P+ T ++L I CL G+ + + HD+++ G + V
Sbjct: 117 ILKKGYEPNAITLTTL-------IKGLCLKGQIHQALHFHDKVVALGF-------HLNKV 162
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C +G+ AL +LR + + P+ V YN +I C+++ +A++L EM
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 222
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
K G+S D YS+L++ + G + A L ++ + +
Sbjct: 223 VSK---------------GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T S+ ++G K+ R +EAK +L M+ K TY CS L+ G
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGI--KPDVVTY------CS---------LMDG 310
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM G + YN +I C+ K VD+A N++ M +P
Sbjct: 311 YCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 371 VVTYNSLI 378
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 129/311 (41%), Gaps = 47/311 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LIN C G+ S L ++ D P++V YN +I C + V EA
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRV-------DGKLVQPNVVMYNTIIDSMCKVKLVNEA 215
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM------------------ 120
+ M G+SPD V+Y+ +ISGFC + + A L +M
Sbjct: 216 FDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDG 275
Query: 121 --DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
E R+ + V+ + QG+ D Y SLM+ Y + KA + +A G +
Sbjct: 276 FCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
+ ++ ING K + EA + M + + TY++LI+ C + + ++L
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV--VTYNSLIDGLCKSGKISYALKL 393
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V RG+ HD + YN ++ C+ VDKA + T+M G
Sbjct: 394 VDEMHDRGV------PHDKI----------TYNSILDALCKNHQVDKAIALLTKMKDEGI 437
Query: 297 VPHMFSVLALI 307
P M++ LI
Sbjct: 438 QPDMYTYTILI 448
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 56/322 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P+E T+++L I+ +C + ++M G+ P++V
Sbjct: 130 MLANKICPNEVTFNTL-------IDGFCKDENVAAAKKAFEEMQKQGL-------KPNIV 175
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYE-- 115
TYN+LI G C G++EEA+ + M +GL P+ V+YN +I+GFC+ ++E K ++
Sbjct: 176 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 235
Query: 116 LKMEMDEKRIL------------RMEEVVYESLMQGLSDE------DAYSSLMNDYLAQG 157
K E+ I MEE SL + DE Y+ L+ +
Sbjct: 236 SKQELVPNVITFNTMIDAYCKEGMMEEGF--SLCSSMLDEGILPNVSTYNCLIAGLCRKQ 293
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
D++ A L E+ + G + VT ++ I+GL K ++R A+++L M + K H T
Sbjct: 294 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGL--KPNHVT 351
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
Y+ L++ G+ M G + A M +P+ YN LI +C+
Sbjct: 352 YNTLMD---------------GYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 396
Query: 278 CKNVDKAYNMYTRMVHYGFVPH 299
++ A + M+ G P+
Sbjct: 397 INKLEAANGLLNEMLEKGLNPN 418
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+L T+N I G C G++ +A + M G+SP+ V+YN ++ G+C+ GK Y+ +
Sbjct: 65 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 124
Query: 118 MEMDEKRILRM--EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
M E ++ EV + +L+ G ++ ++ +KA+ E+ G
Sbjct: 125 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAA----------AKKAF---EEMQKQGLK 171
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
VT + INGL + EA ++ M+ K TY+ALI
Sbjct: 172 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL--KPNIVTYNALIN------------ 217
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
GF + ++ EA + D + P+ +N +I +C+ +++ +++ + M+ G
Sbjct: 218 ---GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 274
Query: 296 FVPHMFSVLALI 307
+P++ + LI
Sbjct: 275 ILPNVSTYNCLI 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M GL P+ TY++L ++ YC+ G+ N+ +M + P++V
Sbjct: 340 MFNLGLKPNHVTYNTL-------MDGYCMEGKLKAALNVRTRM-------EKERKQPNVV 385
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIV 100
TYN LI GYC + ++E A G+L M E GL+P+ +Y+IV
Sbjct: 386 TYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 425
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 49/308 (15%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+++G PDE TY SL +N +C G+ + + + G+ PS++
Sbjct: 348 VFKGFKPDEFTYCSL-------VNGFCQDGDPDQAMAVFKDGLGKGL-------RPSIIV 393
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN LI G C G + AL ++ M E G PD +YN++I+G C++ A L
Sbjct: 394 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL----- 448
Query: 122 EKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +++ +G + D Y++L++ Y Q ++ A L + G + +T
Sbjct: 449 ----------IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 498
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+ +NGL K A++ E EI +M C TY+ +IE+ C++ + V+L+
Sbjct: 499 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI--ITYNTIIESLCNSKKVNEAVDLLGE 556
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ +GL PD + LI C+ ++D AY ++ M V H
Sbjct: 557 MKSKGLT----------------PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 600
Query: 300 MFSVLALI 307
+ +I
Sbjct: 601 TTATYNII 608
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 128/308 (41%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML L PD T++ L ++A C G + L D+++ GV P+L
Sbjct: 207 MLECCLCPDVTTFNKL-------VHALCKKGFVLESERLFDKVLKRGV-------CPNLF 252
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N I G C G ++ A+ +L + GL PD V+YN VI G CR
Sbjct: 253 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCR-------------- 298
Query: 121 DEKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ R++ EE +++ + G D Y+S+++ Y +G + A + ++ G+ +
Sbjct: 299 -KSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEF 357
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T +NG + +A + + + + Y+ LI KG
Sbjct: 358 TYCSLVNGFCQDGDPDQAMAVFKDGLGKGL--RPSIIVYNTLI---------------KG 400
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+GL+ A + + M KPD YN +I C+ + A ++ + G +P
Sbjct: 401 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 460
Query: 300 MFSVLALI 307
+F+ L+
Sbjct: 461 IFTYNTLV 468
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 37/242 (15%)
Query: 2 LW-RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+W +G++PD TY++L +N C + +V + M G +P+++
Sbjct: 487 MWSQGMTPDVITYNTL-------LNGLCKTAKSEEVMEIFKAMTEKGC-------APNII 532
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN +I C +V EA+ +L M GL+PD VS+ +I+GFC++ + AY L M
Sbjct: 533 TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 592
Query: 121 DEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGD 158
+++ + Y ++ S D Y L++ + G+
Sbjct: 593 EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGN 652
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ + Y E G++ T +N L + + +EA I+ M+ + T +T +
Sbjct: 653 VNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIF 712
Query: 219 DA 220
+A
Sbjct: 713 EA 714
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 44/300 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G PD TY+ + IN C G S ++L I G +PD +
Sbjct: 417 MAEKGCKPDIWTYNLI-------INGLCKMGCLSDANHLIGDAITKGCIPD-------IF 462
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ GYC +++ A+ ++ M G++PD ++YN +++G C+ + + E+ M
Sbjct: 463 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 522
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
EK + Y ++++ L + + +A L E+ G + V+
Sbjct: 523 TEKGCAP-NIITYNTIIESLCNSKK-------------VNEAVDLLGEMKSKGLTPDVVS 568
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
I G K A + M +S TT TY+ +I F
Sbjct: 569 FGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTT-ATYNIIIS---------------AF 612
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ + A R M PD Y LI C+ NV++ Y + GF+P +
Sbjct: 613 SEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSL 672
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +++N G F++ ++ +M V D + TY I +C GR A
Sbjct: 113 SYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD-------VYTYTIRIKSFCRTGRPYAA 165
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE---------------- 122
L +LR MP +G +AV+Y V++GF + +A EL EM E
Sbjct: 166 LRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHA 225
Query: 123 --KR--ILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
K+ +L E + + L +G+ ++ + +G +++A L ++ +G +
Sbjct: 226 LCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 285
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
VT + I GL +K+R EA+E L M++ + TY+++I+
Sbjct: 286 VVTYNTVICGLCRKSRVVEAEECLHKMVNGG--FEPNDFTYNSIID-------------- 329
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G+ +G+V +A R + KPD Y L+ C+ + D+A ++ + G
Sbjct: 330 -GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR 388
Query: 298 PHMFSVLALI 307
P + LI
Sbjct: 389 PSIIVYNTLI 398
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 103/279 (36%), Gaps = 40/279 (14%)
Query: 51 DFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
D PS+ +YNA++ G +A + M + + D +Y I I FCR P
Sbjct: 103 DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRP 162
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQG---LSDEDAYSSLMNDY-------------- 153
A L M V Y +++ G D D L ++
Sbjct: 163 YAALRLLRNMPVLGCFS-NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNK 221
Query: 154 LAQGDMEKAYILDREIAHDGYLSESV-----TESVFINGLSKKARTREAKEILLSMISNS 208
L +K ++L+ E D L V T ++FI GL K+ A LL +S
Sbjct: 222 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR-LLGCVSRE 280
Query: 209 CLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
L TY+ +I C G + V EA M++G +P+ Y
Sbjct: 281 GLRPDV-VTYNTVI--C-------------GLCRKSRVVEAEECLHKMVNGGFEPNDFTY 324
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N +I +C+ V A + V GF P F+ +L+
Sbjct: 325 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 363
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 38/294 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
++G +LF Y S++ G+F+++ NL +M N + + Y +
Sbjct: 33 EQGFKHTLF-TYKSMLQKLGFHGKFNEMENLLSEMRSN------LDNTLLEGVYVEAMRF 85
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
Y G+++EA+ M P SYN +++ +A+++ M M +K++
Sbjct: 86 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV--- 142
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E VY Y+ + + G A L R + G S +V + G
Sbjct: 143 ESDVY-----------TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGF 191
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
+ A+E+ +D ++E C + + +LV +G V E
Sbjct: 192 YEFGDNDRAREL-----------------FDEMLECCLCPDVTTFNKLVHALCKKGFVLE 234
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ R D +L P+ +N I C+ ++D+A + + G P + +
Sbjct: 235 SERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 288
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 50/319 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P+E T+++L I+ +C + ++M G+ P++V
Sbjct: 264 MLANKICPNEVTFNTL-------IDGFCKDENVAAAKKAFEEMQKQGL-------KPNIV 309
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G C G++EEA+ + M +GL P+ V+YN +I+GFC+ KM
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK---------KKMMK 360
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ ++L ++V + L+ + ++++++ Y +G ME+ + L + +G L T
Sbjct: 361 EATKVL--DDVSKQELVPNVI---TFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVST 415
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK- 238
I GL +K + AKE LL+ + N L K TY+ LI+ C N++ ++ +L+
Sbjct: 416 YKCLIAGLCRKQDLQAAKE-LLNEMENKGL-KGDVVTYNILIDGLCKNDKSRNAEKLLNE 473
Query: 239 ------------------GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
G+ M G + A M +P+ YN LI +C+
Sbjct: 474 MFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKINK 533
Query: 281 VDKAYNMYTRMVHYGFVPH 299
++ A + M+ G P+
Sbjct: 534 LEAANGLLNEMLEKGLNPN 552
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY++L ++ YC+ G+ N+ +M + P++VTYN
Sbjct: 478 GLKPNHVTYNTL-------MDGYCMEGKLKAALNVRKRM-------EKERKQPNVVTYNV 523
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIV 100
LI GYC + ++E A G+L M E GL+P+ +Y+IV
Sbjct: 524 LIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 5 GLSPDEGTYSSLFNA--YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT-------- 54
GL G L +A Y SLI+ C G + +V+ L +M+ V PD T
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 55 --------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDA 94
P +VTYNAL+ GYC V EA + M + GL PD
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 95 VSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYL 154
++YN++I G+C K +M ++ ++ +E+ ++L+ ++ +Y+SL++
Sbjct: 336 LNYNVLIDGYC-----------KTKMVDEAMVLFKELCNKNLVPTIA---SYNSLIDGLC 381
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G + L E+ + VT ++ I+ L K+ R EA +L+ M+ K
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV--KPN 439
Query: 215 HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
TY+A+++ G+ +R V+ A + M+ +PD YN LI
Sbjct: 440 IVTYNAMMD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+C+ + VD+A ++ M H +P + S +LI
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 54/326 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+SP T++ L N YF + FS ++ + + +G P+LVT+N
Sbjct: 84 KGISPSIATFTILINCYFHQSHT---AFAFSLLATI----LKSGY-------QPNLVTFN 129
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G+C G + +AL + + G D +Y +I+G + + A L EM EK
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-EK 188
Query: 124 RILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGDMEK 161
++ V+Y +L+ GL D Y+SL++ + G ++
Sbjct: 189 SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQE 248
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
L ++ + + T ++ I+ L K+ R EA+ +L M K TY+AL
Sbjct: 249 VTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG--EKPDIVTYNAL 306
Query: 222 IENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
+E G+ R V EA + M+ +PD YN LI +C+ K V
Sbjct: 307 ME---------------GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D+A ++ + + VP + S +LI
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLI 377
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 135/376 (35%), Gaps = 99/376 (26%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
M+ RGL PD Y+ L + Y SLI+ C G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 33 FSKVSNLHDQMIHNGVLPDFVT----------------------------GSPSLVTYNA 64
S V L D+M + PD VT P++VTYNA
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ GYC V A I M + GL PD ++YN++I+G+C+ +A L EM K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
++ + Y SL+ GL D Y+ L++ + +KA
Sbjct: 506 LIP-DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L R+I +G + T ++ L K + + A++ L ++ + C TY LI
Sbjct: 565 ISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV--QTYTILI 621
Query: 223 EN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
C + F EA M + PD + +I +
Sbjct: 622 NALCKDGSF----------------GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNET 665
Query: 282 DKAYNMYTRMVHYGFV 297
DKA + M+ G V
Sbjct: 666 DKAEKLREEMIARGLV 681
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + L PD +Y+SL I+ C G V L D+M +G SP ++
Sbjct: 501 MRHKNLIPDIASYNSL-------IDGLCNLGRIPHVQELLDEMCDSG-------QSPDVI 546
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ +C ++A+ + R + E G+ PD + + ++ C K +LKM
Sbjct: 547 TYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLC------KGEKLKMA- 598
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
E+ + LM G S + Y+ L+N G +A +L ++ + +++
Sbjct: 599 --------EDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
T + I L ++ T +A+++ MI+ ++ Y+
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKRLMYE 690
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 56/322 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P+E T+++L I+ +C + ++M G+ P++V
Sbjct: 264 MLANKICPNEVTFNTL-------IDGFCKDENVAAAKKAFEEMQKQGL-------KPNIV 309
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYE-- 115
TYN+LI G C G++EEA+ + M +GL P+ V+YN +I+GFC+ ++E K ++
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369
Query: 116 LKMEMDEKRIL------------RMEEVVYESLMQGLSDE------DAYSSLMNDYLAQG 157
K E+ I MEE SL + DE Y+ L+ +
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGF--SLCSSMLDEGILPNVSTYNCLIAGLCRKQ 427
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
D++ A L E+ + G + VT ++ I+GL K ++R A+++L M + K H T
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGL--KPNHVT 485
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
Y+ L++ G+ M G + A M +P+ YN LI +C+
Sbjct: 486 YNTLMD---------------GYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530
Query: 278 CKNVDKAYNMYTRMVHYGFVPH 299
++ A + M+ G P+
Sbjct: 531 INKLEAANGLLNEMLEKGLNPN 552
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 41/283 (14%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYC---FLG 73
N + IN C G+ +K + + M G+ SP++VTYN L+ GYC G
Sbjct: 200 LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGI-------SPNVVTYNTLVDGYCKRGSAG 252
Query: 74 RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY 133
++ +A ++ M + P+ V++N +I GFC+ A + EM +K+ L+ V Y
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEM-QKQGLKPNIVTY 311
Query: 134 ESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
SL+ GL + G +E+A L ++ G VT + ING KK
Sbjct: 312 NSLINGLCN-------------NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH 253
+EA ++ + + T++ +I+ + G++ E
Sbjct: 359 MKEATKVFDDVSKQELVPNV--ITFNTMID---------------AYCKEGMMEEGFSLC 401
Query: 254 DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ML P+ YN LI CR +++ A + M + G
Sbjct: 402 SSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+L T+N I G C G++ +A + M G+SP+ V+YN ++ G+C+ GK Y+ +
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 118 MEMDEKRILRM--EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
M E ++ EV + +L+ G ++ ++ +KA+ E+ G
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAA----------AKKAF---EEMQKQGLK 305
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
VT + INGL + EA ++ M+ K TY+ALI
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL--KPNIVTYNALIN------------ 351
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
GF + ++ EA + D + P+ +N +I +C+ +++ +++ + M+ G
Sbjct: 352 ---GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 296 FVPHMFSVLALI 307
+P++ + LI
Sbjct: 409 ILPNVSTYNCLI 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY++L ++ YC+ G+ N+ +M + P++VTYN
Sbjct: 478 GLKPNHVTYNTL-------MDGYCMEGKLKAALNVRTRM-------EKERKQPNVVTYNV 523
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIV 100
LI GYC + ++E A G+L M E GL+P+ +Y+IV
Sbjct: 524 LIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 5 GLSPDEGTYSSLFNA--YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT-------- 54
GL G L +A Y SLI+ C G + +V+ L +M+ V PD T
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 55 --------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDA 94
P +VTYNAL+ GYC V EA + M + GL PD
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 95 VSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYL 154
++YN++I G+C K +M ++ ++ +E+ ++L+ ++ +Y+SL++
Sbjct: 336 LNYNVLIDGYC-----------KTKMVDEAMVLFKELCNKNLVPTIA---SYNSLIDGLC 381
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G + L E+ + VT ++ I+ L K+ R EA +L+ M+ K
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV--KPN 439
Query: 215 HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
TY+A+++ G+ +R V+ A + M+ +PD YN LI
Sbjct: 440 IVTYNAMMD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+C+ + VD+A ++ M H +P + S +LI
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 54/326 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+SP T++ L N YF + FS ++ + + +G P+LVT+N
Sbjct: 84 KGISPSIATFTILINCYFHQSHT---AFAFSLLATI----LKSGY-------QPNLVTFN 129
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G+C G + +AL + + G D +Y +I+G + + A L EM EK
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-EK 188
Query: 124 RILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGDMEK 161
++ V+Y +L+ GL D Y+SL++ + G ++
Sbjct: 189 SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQE 248
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
L ++ + + T ++ I+ L K+ R EA+ +L M K TY+AL
Sbjct: 249 VTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG--EKPDIVTYNAL 306
Query: 222 IENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
+E G+ R V EA + M+ +PD YN LI +C+ K V
Sbjct: 307 ME---------------GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D+A ++ + + VP + S +LI
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLI 377
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 135/376 (35%), Gaps = 99/376 (26%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
M+ RGL PD Y+ L + Y SLI+ C G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 33 FSKVSNLHDQMIHNGVLPDFVT----------------------------GSPSLVTYNA 64
S V L D+M + PD VT P++VTYNA
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ GYC V A I M + GL PD ++YN++I+G+C+ +A L EM K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
++ + Y SL+ GL D Y+ L++ + +KA
Sbjct: 506 LIP-DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L R+I +G + T ++ L K + + A++ L ++ + C TY LI
Sbjct: 565 ISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV--QTYTILI 621
Query: 223 EN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
C + F EA M + PD + +I +
Sbjct: 622 NALCKDGSF----------------GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNET 665
Query: 282 DKAYNMYTRMVHYGFV 297
DKA + M+ G V
Sbjct: 666 DKAEKLREEMIARGLV 681
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 35/269 (13%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+SP+ TYS+L + + L A+C G+ + N+ M+ G P++VTY++
Sbjct: 116 GISPEVVTYSALISGFCIL--AFCKEGKVKEAKNVFAAMMKKGF-------KPNVVTYSS 166
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC + V +A I M + G++PD SYNI+I+GFC+I+ A L EM ++
Sbjct: 167 LMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRK 226
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
I+ V Y SL+ GL D YSSL++ ++KA
Sbjct: 227 IIP-NVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKA 285
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L ++ G T ++ INGL K R +A+ I ++ TY +I
Sbjct: 286 IALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKG--YNINVNTYTVMI 343
Query: 223 EN-CSNNEFKSLVELVKGFRMRGLVSEAA 250
C+N F + ++ G + A
Sbjct: 344 HVFCNNGMFGEALAMLSKMEENGCIPNAV 372
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 137/317 (43%), Gaps = 54/317 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+ +G PD T +SL I CL G+ + + HD++ G + V
Sbjct: 36 IFKKGYDPDAITLTSL-------IKGLCLKGQIHQALHFHDKLAALGFRFNH-------V 81
Query: 61 TYNALIYGYCFLGRVEEALGILRGM------PEMGLSPDAVSYNIVISGFCRIR--EPGK 112
+Y LI G C +G+ AL +LR + P++G+SP+ V+Y+ +ISGFC + + GK
Sbjct: 82 SYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEGK 141
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIA 170
E K V+ ++M+ + YSSLM+ Y ++ KA + +A
Sbjct: 142 VKEAKN-------------VFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 188
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEF 230
G + + ++ ING K T A + M + TY++LI+
Sbjct: 189 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNV--VTYNSLID------- 239
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
G G +S A + D M PD Y+ L+ C+ +VDKA + T+
Sbjct: 240 --------GLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTK 291
Query: 291 MVHYGFVPHMFSVLALI 307
+ G P+M++ LI
Sbjct: 292 LKDQGLQPNMYTYTILI 308
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 46/263 (17%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+LVT + LI + LG+ + +L + + G PDA++ +I G C + +A
Sbjct: 9 NLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQIHQALHFH 68
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL-- 175
++ R V Y +L+ GL G A L R + DG L
Sbjct: 69 DKLAALG-FRFNHVSYGTLINGLCK-------------VGQTRAALQLLRRV--DGKLVQ 112
Query: 176 ------SESVTESVFING-----LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
E VT S I+G K+ + +EAK + +M+ K TY +L++
Sbjct: 113 PDVGISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKG--FKPNVVTYSSLMD- 169
Query: 225 CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
G+ + V++A + M G PD YN LI C+ K D A
Sbjct: 170 --------------GYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAA 215
Query: 285 YNMYTRMVHYGFVPHMFSVLALI 307
N++ M +P++ + +LI
Sbjct: 216 MNLFEEMHCRKIIPNVVTYNSLI 238
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 35/151 (23%)
Query: 4 RGLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGEFSK 35
RG PD TYSSL +A Y LIN C GG
Sbjct: 260 RGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 319
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
N+ + ++ G + ++ TY +I+ +C G EAL +L M E G P+AV
Sbjct: 320 AQNIFEDLLVKGY-------NINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAV 372
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
+Y I+I E KA +L +EM + +L
Sbjct: 373 TYEIIIRSLFDKDENDKAEKLLLEMITRGLL 403
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 37/228 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++P++ T++ L ++A C G N MI + PD +V
Sbjct: 259 MVLKNINPNDYTFNIL-------VDALCKEGNVKGAKNALAMMIKGSIKPD-------VV 304
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GYC + V +A +L + MG++PDA SYNI+I+GFC+I+ +A L EM
Sbjct: 305 TYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEM 364
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
+RI V Y SL+ GL D YSSL++
Sbjct: 365 RCQRI-SPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNH 423
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
++KA L ++I G T ++ I+GL K R + A+++ +++
Sbjct: 424 LDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLT 471
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 33/255 (12%)
Query: 54 TGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
T SP +VT+N+LIYG+C +GR++EA G+ M ++P+ ++NI++ C+ K
Sbjct: 228 TISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCK-EGNVKG 286
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+ + M K ++ + V Y SLM G Y ++ KA + IA G
Sbjct: 287 AKNALAMMIKGSIKPDVVTYNSLMDG-------------YCLVNEVNKAKHVLSTIARMG 333
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT-TYDALIENCSNNEFKS 232
++ + ++ ING K EA + M C + +T TY++LI+
Sbjct: 334 VAPDAQSYNIMINGFCKIKMVNEALSLFNEM---RCQRISPNTVTYNSLID--------- 381
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
G G +S A + D M PD Y+ LI C+ ++DKA + ++
Sbjct: 382 ------GLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIK 435
Query: 293 HYGFVPHMFSVLALI 307
G P+M++ LI
Sbjct: 436 DQGIQPNMYTYNILI 450
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 131/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++L + +CL G+ + + HD+++ G + V
Sbjct: 119 ILKMGYQPDTITLNTL-------VKGFCLNGKVKEALHFHDRVLALGF-------QLNQV 164
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C +G AL +LR + ++ D V Y+I+I C+ + AYEL EM
Sbjct: 165 TYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEM 224
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I + V + SL+ G + G +++A+ L ++ T
Sbjct: 225 IAKTI-SPDVVTFNSLIYG-------------FCIVGRLKEAFGLFHQMVLKNINPNDYT 270
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++ L K+ + AK L MI S K TY++L++ G+
Sbjct: 271 FNILVDALCKEGNVKGAKNALAMMIKGSI--KPDVVTYNSLMD---------------GY 313
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A T+ PD YN +I C+ K V++A +++ M P+
Sbjct: 314 CLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNT 373
Query: 301 FSVLALI 307
+ +LI
Sbjct: 374 VTYNSLI 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 55/292 (18%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
++ V + +M NG++P S+VT +I YC L + A + + +MG P
Sbjct: 74 YNTVISFFRKMQFNGIVP-------SIVTLGIVINCYCHLREINFAFSLFGKILKMGYQP 126
Query: 93 DAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
D ++ N ++ GFC +++E ++ + + ++ +V Y +L+ GL
Sbjct: 127 DTITLNTLVKGFCLNGKVKEALHFHDRVLALG----FQLNQVTYATLINGLC-------- 174
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYL--SESVTESVFINGLSKKARTREAKEILLSMISN 207
G+ A + R+I DG L ++ V S+ I+ L K +A E+ MI+
Sbjct: 175 -----KMGETRAALQVLRKI--DGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEMIAK 227
Query: 208 SCLSKTTHTTYDALI---------------------ENCSNNEFKSLVELVKGFRMRGLV 246
+ T+++LI +N + N++ + LV G V
Sbjct: 228 TISPDV--VTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDY-TFNILVDALCKEGNV 284
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
A A M+ G+ KPD YN L+ +C V+KA ++ + + G P
Sbjct: 285 KGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAP 336
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 39/188 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M + +SP+ TY+SL I+ C G S L D+M NG PD T S
Sbjct: 364 MRCQRISPNTVTYNSL-------IDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLID 416
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++ TYN LI G C GR++ A + + + G S
Sbjct: 417 ALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSL 476
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED---AYSSL 149
+ +YNI+I+G C+ KA L +M++ I V YE++++ L +D L
Sbjct: 477 NIRTYNILINGLCKEGLFDKAEALLSKMEDNDI-NPNVVTYETIIRSLFYKDYNEKAEKL 535
Query: 150 MNDYLAQG 157
+ + +A+G
Sbjct: 536 LREMVARG 543
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M GL P T +++ +N C+ G ++ L +M + G P+
Sbjct: 133 MFKTGLKPTVVTLNTI-------VNGLCVEGNVARAVCLTREMENAGY-------EPNGY 178
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ AL+ G C +G + A+G +R M E P+ V YN ++ GFC+ +A L EM
Sbjct: 179 TFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEM 238
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+EK + + V Y L+QG+ + G+ +KAY L E+ G + + T
Sbjct: 239 NEKGV-KGSLVTYNCLIQGVC-------------SIGEWKKAYFLLNEMMEKGVMPDVQT 284
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++G K+ EAK ++ M+ + TY++LI G+
Sbjct: 285 FTILVDGFCKEGLILEAKSVISFMVQMG--VEPNVVTYNSLI---------------GGY 327
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ + EA + M+ P YN LI C+ K+VDKA + MV+ G P +
Sbjct: 328 CLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDV 387
Query: 301 FSVLALI 307
+ L+
Sbjct: 388 VTWTTLV 394
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
++G SL Y LI C GE+ K L ++M+ GV+PD + T+ L+ G
Sbjct: 240 EKGVKGSLV-TYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPD-------VQTFTILVDG 291
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
+C G + EA ++ M +MG+ P+ V+YN +I G+C + E +A ++ M K+ L
Sbjct: 292 FCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCL-- 349
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
VV Y+SL++ + D++KA L E+ ++G + VT + ++G
Sbjct: 350 PSVV------------TYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGF 397
Query: 189 SKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNE----FKSLVE------- 235
+ + AKE+ +M + T D LI+ E F++L E
Sbjct: 398 CEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDI 457
Query: 236 -----LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
++ G G +++A + +L + D +N +I CR +D A ++ +
Sbjct: 458 VIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMK 517
Query: 291 MVHYGFVPHMFS 302
M G P+ S
Sbjct: 518 MEENGCQPNKCS 529
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ P+ TY+SL I YCL E + + M+ LP S+V
Sbjct: 308 MVQMGVEPNVVTYNSL-------IGGYCLMNEIDEAIKVFRLMVLKKCLP-------SVV 353
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI+G+C + V++A+ +L M GL PD V++ ++SGFC + +P A EL M
Sbjct: 354 TYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTM 413
Query: 121 DE------------------KRILRMEE-VVYESLMQGLSDED--AYSSLMNDYLAQGDM 159
+ K R E +++ +L + D D Y+ +++ G +
Sbjct: 414 KQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKL 473
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
A + + G +S T ++ I GL +K +A+++L+ M N C
Sbjct: 474 NDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGC 523
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 33/285 (11%)
Query: 25 NAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS--PSLVTYNALIYGYCFLGRVEEALGIL 82
N Y G + + + D + G + D V + P++V YNA++ G+C G V EAL +
Sbjct: 176 NGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLF 235
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M E G+ V+YN +I G C I E KAY L EM EK + + D
Sbjct: 236 AEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGV--------------MPD 281
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
++ L++ + +G + +A + + G VT + I G EA ++
Sbjct: 282 VQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFR 341
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
M+ CL TY++LI G+ V +A + M++
Sbjct: 342 LMVLKKCLPSV--VTYNSLIH---------------GWCKVKDVDKAMCLLNEMVNEGLY 384
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD + L+ C A ++ M YG VP + + ++
Sbjct: 385 PDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVL 429
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 36/267 (13%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N +I C LG + A +L M + GL P V+ N +++G C +A L E
Sbjct: 109 TLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTRE- 167
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
ME YE + + +L+N GDM A R++ Y V
Sbjct: 168 -------MENAGYE------PNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVV 214
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK-------- 231
+ ++G K EA + M N K + TY+ LI+ CS E+K
Sbjct: 215 YNAIMDGFCKGGFVSEALSLFAEM--NEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNE 272
Query: 232 -----------SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
+ LV GF GL+ EA M+ +P+ YN LI +C
Sbjct: 273 MMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNE 332
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+D+A ++ MV +P + + +LI
Sbjct: 333 IDEAIKVFRLMVLKKCLPSVVTYNSLI 359
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++ I +CL G+ + + HD++I G D V
Sbjct: 254 ILKNGYEPDTITLTTF-------IKGFCLKGQIHQALHFHDKVIAMGFHLD-------QV 299
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G + AL +LR + PD V YN +I G C+ + A++L E
Sbjct: 300 SYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D Y++L++ + G ++ A L ++ + + T
Sbjct: 360 VSKRI--------------FPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYT 405
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S+ ++G K +EAK +L M+ S K TY +L++ G+
Sbjct: 406 FSILVDGFCKDGNIKEAKNVLAMMMKQSI--KPDVVTYSSLMD---------------GY 448
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A +TM H + YN +I C+ K VD+A ++ M H P +
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 301 FSVLALI 307
+ +LI
Sbjct: 509 ITYSSLI 515
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ + + + PD + TYNALI G+C +G++++A+
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD-------VFTYNALISGFCIVGKLKDAI 388
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELKMEMDEKRILRMEEVVYESL 136
+ M + PD +++I++ GFC+ I+E + M+ K
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK------------- 435
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
D YSSLM+ Y ++ KA + ++H G + + ++ ING K E
Sbjct: 436 ----PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
A ++ M TY +LI+ G G +S A D M
Sbjct: 492 AMKLFKEMHHKQIFPDV--ITYSSLID---------------GLCKSGRISYALELVDEM 534
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ +PD YN ++ C+ +VDKA + T++ G P M + L+
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILV 585
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 75/342 (21%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
+ + PD TY++L I+ +C+ G+ +L ++M ++PD T S
Sbjct: 362 KRIFPDVFTYNAL-------ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC 414
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P +VTY++L+ GYC + V +A I M G++ +
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL--------------- 140
SYNI+I+GFC+I+ +A +L EM K+I + + Y SL+ GL
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSSLIDGLCKSGRISYALELVDE 533
Query: 141 -------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
D Y+S+++ + ++KA L ++ G + T ++ + GL + +
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH 253
+A+++ ++ L+ N + + +++GF +GL EA
Sbjct: 594 LEDARKV-----------------FEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL 636
Query: 254 DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
M PD Y +I+ D A + M+ G
Sbjct: 637 SKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 145/347 (41%), Gaps = 75/347 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
M+ + +SPD TYSSL I+ +C+ G+ +L ++MI + + P+ T S
Sbjct: 224 MVSKRISPDVVTYSSL-------ISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+VTYN+L+ GYC + +V +A + M + G++P
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------------ 140
D SY+I+I+GFC+I+ +A +L EM K+I V Y SL+ GL
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP-NVVTYNSLVDGLCKSGRTSCALEL 395
Query: 141 ----------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
S+ Y+S+++ ++KA +L +I G + T +V INGL K
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
R +A+++ D L++ S N + + L+ GF +G E
Sbjct: 456 VGRLDDAQKVF----------------EDLLVKGYSPNIY-TYTSLINGFCNKGFFDEGL 498
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M P+ Y LI DKA + M+ G +
Sbjct: 499 AMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 68/326 (20%)
Query: 32 EFSKVSNLHDQMIHNGVLPDFVTGS----------------------------PSLVTYN 63
++ +L QM NG+ PDF+T + P VT+
Sbjct: 73 QYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFT 132
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI G C G V +AL + G D VSY +I+G CR+ E A +L +D K
Sbjct: 133 ILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGK 192
Query: 124 RILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEK 161
++R V+Y +++ + D YSSL++ + G ++
Sbjct: 193 -LVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY 251
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A L + D T S+ I+G K+ + REAK +L M+ + K TY++L
Sbjct: 252 AVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV--KLDVVTYNSL 309
Query: 222 IENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
++ G+ + V++A + M PD Y+ +I C+ K V
Sbjct: 310 MD---------------GYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D+A ++ M P++ + +L+
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLV 380
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 144/362 (39%), Gaps = 85/362 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G PD T++ L I CL GE K HD+++ G D V
Sbjct: 119 ILKKGYHPDAVTFTIL-------IKGLCLKGEVHKALYFHDKVVAQGFQLD-------QV 164
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G + A+ +LR + + P+ V Y+ +I C+ + A++L EM
Sbjct: 165 SYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEM 224
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D YSSL++ + G ++ A L + D T
Sbjct: 225 VSKRIS--------------PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYT 270
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-C---SNNEFKSLVE- 235
S+ I+G K+ + REAK +L M+ + K TY++L++ C N+ KSL
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNV--KLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTM------------------------ 256
++ GF +V EA + + M
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 257 ----------LHGNHKPDGGV-YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
+H +P + YN ++ C+ +VDKA + T++ G P +F+
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 306 LI 307
LI
Sbjct: 449 LI 450
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 54/325 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L++ YC G + D+M+ G+ ++V N LI GYC LG+V EA
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEMLRVGL-------KVNMVICNTLIKGYCKLGQVCEA 386
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ GM + L PD SYN ++ G+CR + KA+ L EM I V Y ++++
Sbjct: 387 ERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITP-TVVTYNTVIK 445
Query: 139 GLSDEDAYS----------------------SLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL D +Y ++++ + GD ++A +L +EI G+
Sbjct: 446 GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK 505
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
+V + I+GL K + EA + M TY L + C N + +
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGL--SPDEITYRTLSDGYCKNGNVQEAFQ 563
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHK--------------------PDGGVYNFLIVEH 275
+KG R +S + +++++ G K P+ Y LI
Sbjct: 564 -IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGW 622
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHM 300
C + +DKA+++Y M+ GF P++
Sbjct: 623 CDEQKLDKAFHLYFEMIERGFTPNV 647
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GLSPDE TY +L + Y C G + + M + S S+ YN+
Sbjct: 537 GLSPDEITYRTLSDGY-------CKNGNVQEAFQIKGVMERQAM-------SASIEMYNS 582
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G + ++ + +L M GLSP+ V+Y +ISG+C ++ KA+ L EM E R
Sbjct: 583 LIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE-R 641
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLM------------------NDYLAQGDM--EKAYI 164
VV ++ L +D S +D L + D+ E I
Sbjct: 642 GFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKI 701
Query: 165 LDREIAHD--GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
D D LS ++ ++ I+GL K + EA+ +L ++S L + TY LI
Sbjct: 702 ADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPD--NFTYCTLI 759
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
CS + G V EA + D ML P+ +YN LI C+ N+D
Sbjct: 760 HACS---------------VSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNID 804
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
+A ++ ++ G VP+ + LI
Sbjct: 805 RAQRLFYKLYQKGLVPNAVTYNILI 829
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 37/285 (12%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++NA+C G + ++M+ G+ P++VTYN L+ GY G E +L
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGL-------EPNVVTYNGLVNGYVGRGDFEGVERVL 284
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
R M E G+S + V+ +++ G+C+ + +A +L E++E +L ++E VY L+ G
Sbjct: 285 RLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDG--- 341
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y G ME A + E+ G V + I G K + EA+ + +
Sbjct: 342 ----------YCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFV 391
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
M+ + K +Y+ L++ G+ G VS+A + ML
Sbjct: 392 GMVDWNL--KPDCYSYNTLLD---------------GYCREGKVSKAFMLCEEMLGDGIT 434
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P YN +I + D A +++ MV G P+ S ++
Sbjct: 435 PTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ RG PD TY +L I+A + G + L D+M+ G++P+ +
Sbjct: 743 LMSRGFLPDNFTYCTL-------IHACSVSGNVDEAFKLRDEMLEKGLIPN-------IT 788
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YNALI G C LG ++ A + + + GL P+AV+YNI+I +CRI + KA L+ +M
Sbjct: 789 IYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKM 848
Query: 121 DEKRI 125
E+ I
Sbjct: 849 TEEGI 853
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 37/250 (14%)
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
GRV A+ + + G+ PD +IV++ C++ A E+ +E++V
Sbjct: 207 GRV--AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEV-----------LEKMV 253
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
E L + Y+ L+N Y+ +GD E + R ++ G VT ++ + G KK
Sbjct: 254 KEGLEPNVV---TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKG 310
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE---------------- 235
+ EA E LL + L Y L++ C + V
Sbjct: 311 KMDEA-EKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVI 369
Query: 236 ---LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
L+KG+ G V EA R M+ N KPD YN L+ +CR V KA+ + M+
Sbjct: 370 CNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML 429
Query: 293 HYGFVPHMFS 302
G P + +
Sbjct: 430 GDGITPTVVT 439
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 24 INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILR 83
I+ C G+ + ++ ++ G LPD T Y LI+ G V+EA +
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFT-------YCTLIHACSVSGNVDEAFKLRD 776
Query: 84 GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL-SD 142
M E GL P+ YN +I+G C++ I R + + Y+ +GL +
Sbjct: 777 EMLEKGLIPNITIYNALINGLCKL---------------GNIDRAQRLFYKLYQKGLVPN 821
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
Y+ L+ Y GD++KA L ++ +G
Sbjct: 822 AVTYNILIGCYCRIGDLDKASRLREKMTEEG 852
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 58/325 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ G+SPD TYS+L + +F + G+ +L ++MI + PD T +
Sbjct: 204 MVSEGISPDVVTYSALISGFF-------IVGKLKDAIDLFNKMILENIKPDVYTFNILVD 256
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY +L+ GYC + +V +A I M + G++P
Sbjct: 257 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNP 316
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D SYNI+I+GFC+I++ +A L +M K I+ V Y SL+ GL
Sbjct: 317 DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP-NVVTYTSLIDGLCKS--------- 366
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G + A L E+ G + +T S ++ L K + +A + L+K
Sbjct: 367 ----GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL---------LTK 413
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
++ L N + + +++GF ++GL +EA M PD Y +I
Sbjct: 414 LKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFV 297
+ + D A + M+ G +
Sbjct: 474 LSLFKKDENDMAEKLLREMIARGLL 498
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 39/292 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL------VTYNALIYGYCFLGRVE 76
LIN + G+ ++ ++ G P+ +T + + V+Y LI G C +G+
Sbjct: 101 LINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQAR 160
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
AL +LR + + P+ V YN +I C+++ +A++L EM +
Sbjct: 161 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM---------------V 205
Query: 137 MQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
+G+S D YS+L++ + G ++ A L ++ + + T ++ ++G K + +
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
E K + M+ K TY CS L+ G+ + V++A +T
Sbjct: 266 EGKTVFAMMMKQGI--KPNVVTY------CS---------LMDGYCLVKQVNKANSIFNT 308
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M G PD YN +I C+ K VD+A N++ +M +P++ + +LI
Sbjct: 309 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 42/274 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ +L+ +M+ G+ SP +VTY+ALI G+ +G++++A+
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMVSEGI-------SPDVVTYSALISGFFIVGKLKDAI 233
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM-Q 138
+ M + PD ++NI++ GFC+ GK E K V+ +M Q
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCK---DGKMKEGK-------------TVFAMMMKQ 277
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G+ + Y SLM+ Y + KA + +A G ++ + ++ ING K + EA
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 337
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ M + + TY +LI+ G G +S A + D M
Sbjct: 338 MNLFKKMHCKNIIPNV--VTYTSLID---------------GLCKSGKISYALKLVDEMH 380
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
PD Y+ ++ C+ VDKA + T++
Sbjct: 381 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 414
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 58/325 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ G+SPD TYS+L + +F + G+ +L ++MI + PD T +
Sbjct: 68 MVSEGISPDVVTYSALISGFFIV-------GKLKDAIDLFNKMILENIKPDVYTFNILVD 120
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY +L+ GYC + +V +A I M + G++P
Sbjct: 121 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNP 180
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D SYNI+I+GFC+I++ +A L +M K I+ V Y SL+ GL
Sbjct: 181 DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP-NVVTYTSLIDGLC----------- 228
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G + A L E+ G + +T S ++ L K + +A + L+K
Sbjct: 229 --KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL---------LTK 277
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
++ L N + + +++GF ++GL +EA M PD Y +I
Sbjct: 278 LKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 337
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFV 297
+ + D A + M+ G +
Sbjct: 338 LSLFKKDENDMAEKLLREMIARGLL 362
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 33/249 (13%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+Y LI G C +G+ AL +LR + + P+ V YN +I C+++ +A++L E
Sbjct: 8 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 67
Query: 120 MDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
M + +G+S D YS+L++ + G ++ A L ++ + +
Sbjct: 68 M---------------VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDV 112
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T ++ ++G K + +E K + M+ K TY CS L+
Sbjct: 113 YTFNILVDGFCKDGKMKEGKTVFAMMMKQGI--KPNVVTY------CS---------LMD 155
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G+ + V++A +TM G PD YN +I C+ K VD+A N++ +M +P
Sbjct: 156 GYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP 215
Query: 299 HMFSVLALI 307
++ + +LI
Sbjct: 216 NVVTYTSLI 224
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 42/274 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ +L+ +M+ G+ SP +VTY+ALI G+ +G++++A+
Sbjct: 45 YNTIIDSMCKVKLVNEAFDLYSEMVSEGI-------SPDVVTYSALISGFFIVGKLKDAI 97
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM-Q 138
+ M + PD ++NI++ GFC+ GK E K V+ +M Q
Sbjct: 98 DLFNKMILENIKPDVYTFNILVDGFCK---DGKMKEGK-------------TVFAMMMKQ 141
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G+ + Y SLM+ Y + KA + +A G ++ + ++ ING K + EA
Sbjct: 142 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 201
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ M + + TY +LI+ G G +S A + D M
Sbjct: 202 MNLFKKMHCKNIIPNV--VTYTSLID---------------GLCKSGKISYALKLVDEMH 244
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
PD Y+ ++ C+ VDKA + T++
Sbjct: 245 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 278
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML GL P T++ L IN C+ G+ + L D + G D +
Sbjct: 153 MLKLGLEPSVVTFTIL-------INGLCVKGDVGRAVELVDHVEKTGYRSD-------VK 198
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C +G+ EA+G LR M E +P+ V Y+ V+ G C+ +A L +EM
Sbjct: 199 TYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM 258
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I + V Y L+QGL + + E +LD E+ G + + +
Sbjct: 259 SGKGI-KPNLVTYTCLIQGLCNFGRWK------------EAGSLLD-EMMKMGVMPDLQS 304
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ++ L K+ + +AK ++ MI + TY++LI+ C N+
Sbjct: 305 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDV--FTYNSLIDRYCLQNQ---------- 352
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ EA R + M+ PD Y LI C+ KN++KA ++ M+ GF P
Sbjct: 353 ------MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD 406
Query: 300 MFSVLALI 307
+ + LI
Sbjct: 407 VVTWTTLI 414
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 76/294 (25%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD TY+SL I+ YCL + + + + + M+ G LPD +V
Sbjct: 328 MILVGEVPDVFTYNSL-------IDRYCLQNQMDEATRVFELMVSRGCLPD-------IV 373
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y +LI+G+C + + +A+ +L M ++G +PD V++ +I GFC++ P A EL + M
Sbjct: 374 AYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNM 433
Query: 121 D----------------------------------EKRILRMEEVVYESLMQGLSDED-- 144
EK L + V+Y ++ G+
Sbjct: 434 HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKL 493
Query: 145 --------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
AY+ ++N + QG ++KA L + +G + +S T +VF
Sbjct: 494 NTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVF 553
Query: 185 INGL-SKKARTREAKEILLSMISNSCLS---KTTHTTYDALIENCSNNEFKSLV 234
+ GL +++ R K L+M+ + S TT + L N +NE + +
Sbjct: 554 VQGLVAEREIARSIK--YLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 605
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 113/305 (37%), Gaps = 68/305 (22%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGM-PEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
PS++ + L+ + A+ +++ M +G+ PD N+VI+ C ++ +
Sbjct: 89 PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFS 148
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ M + L +E V ++ L+N +GD+ +A L + GY
Sbjct: 149 VLGTMLK---LGLEPSVV-----------TFTILINGLCVKGDVGRAVELVDHVEKTGYR 194
Query: 176 SESVTESVFINGLSKKARTREA---------------------------KEILLSMISNS 208
S+ T V INGL K +T EA K+ L+S
Sbjct: 195 SDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGL 254
Query: 209 CLS------KTTHTTYDALIENCSN--------------------NEFKSLVELVKGFRM 242
CL K TY LI+ N + +SL LV
Sbjct: 255 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 314
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
G + +A M+ PD YN LI +C +D+A ++ MV G +P + +
Sbjct: 315 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 374
Query: 303 VLALI 307
+LI
Sbjct: 375 YTSLI 379
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 150/356 (42%), Gaps = 73/356 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
ML RG P TY+++ +SL C G S D M++ ++PD V+ +
Sbjct: 303 MLGRGALPTVVTYNTIM---YSL----CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIY 355
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
PS+VTYN LI G C G ++ A G+ M + GL P
Sbjct: 356 GYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCP 415
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMN 151
D V++ I++ GFC++ A EL EM L +GL D AY++ +
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEM---------------LSRGLKPDCIAYTTRIV 460
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
L G+ KA+ + E+ +G+ + +T +V INGL K +A E++ M +
Sbjct: 461 GELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVP 520
Query: 212 KTTHTTYDALI------------ENCSNNEFKSLVE--------LVKGFRMRGLVSEAAR 251
H TY ++I E ++ K + L+ + +RG + A +
Sbjct: 521 --DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D M P+ YN LI C+ +D AYN++ M G P+ ++ LI
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 46/294 (15%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
+ Y LI +C F + ++L +M+ G LP ++VTYN ++Y C LGRV +
Sbjct: 278 HTYNPLIRGFCKKEMFEEANDLRREMLGRGALP-------TVVTYNTIMYSLCRLGRVSD 330
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A L M L PD VSYN +I G+ R+ +A L E+ K ++ VV
Sbjct: 331 ARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLV--PSVV----- 383
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
Y++L++ G+++ A + ++ G + VT ++ + G + A
Sbjct: 384 -------TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMA 436
Query: 198 KEILLSMISN----SCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH 253
KE+ M+S C++ TT + + N S K F M+
Sbjct: 437 KELFDEMLSRGLKPDCIAYTTRIVGELKLGNPS-----------KAFGMK---------- 475
Query: 254 DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ M PD YN LI C+ N D A + +M G VP + ++I
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 33/252 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VT+N ++ C G V A+ +L M G P+ VSYN++++G GK
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLS-----GKG--- 256
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
E D R +E++ + M GL Y+ L+ + + E+A L RE+ G L
Sbjct: 257 --EFD-----RAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGAL 309
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
VT + + L + R +A+ L M++ + +Y+ LI
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL--VSYNTLI------------- 354
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G+ G +EA + N P YN LI CR N+D A M M+ +G
Sbjct: 355 --YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 296 FVPHMFSVLALI 307
P + + L+
Sbjct: 413 LCPDVVTFTILV 424
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G+ PD TY+S+ I+A+ + G K + M+ G+ PS+V
Sbjct: 513 MRLEGIVPDHVTYTSI-------IHAHLISGLLRKAEEVFSDMLKKGI-------HPSVV 558
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI+ Y GR++ A M + G+SP+ ++YN +I G C+ AY L EM
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ K + + Y L+ S+ + + Y DM LDREI D S T
Sbjct: 619 ESKGV-SPNKYTYTILINENSNLQYWQDALKLY---KDM-----LDREIKPD-----SCT 664
Query: 181 ESVFINGLSK 190
S + LSK
Sbjct: 665 HSALMKHLSK 674
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 64/336 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAY-----------------FSLINAYCLGGEFSKVSNLHDQM 43
M+ + +SP+ TYS+L + + F L++ +C G + N+ M
Sbjct: 234 MVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEAKNVLAMM 293
Query: 44 IHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISG 103
+ G+ PD +VTY++L+ GYC + V +A I M G++ +A SY+I+I+G
Sbjct: 294 MKQGIKPD-------VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMING 346
Query: 104 FCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED------------------- 144
FC+I+ +A +L EM K+I + + Y +L+ GL
Sbjct: 347 FCKIKMVDEAMKLFKEMHHKQIFP-DVITYSALIDGLCKSGRISYALQLVDQMHDRGVAP 405
Query: 145 ---AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y+S+++ ++KA L + G T ++ I+GL K R ++A+ I
Sbjct: 406 NIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNI- 464
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
++ L+ N + +++GF GL+ E+ M
Sbjct: 465 ----------------FEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGC 508
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
PD Y +I DKA + M+ G +
Sbjct: 509 IPDAVTYEIIICSLFDKDKNDKAEKLLREMITRGLL 544
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 56/307 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T+++L I CL G+ + + HD++I G D V
Sbjct: 129 ILKNGYEPDTITFTTL-------IKGLCLKGDIHQALHFHDKVIAMGFHLD-------QV 174
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G AL +LR + PD V YN +I G C+ + A++L EM
Sbjct: 175 SYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEM 234
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI VV YS+L++ + G ++ A+ ++
Sbjct: 235 VAKRI--SPNVV------------TYSALISGFCIVGKLKDAFDFFNKMIF--------- 271
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++G K+ R +EAK +L M+ K TY +L++ G+
Sbjct: 272 --ILVDGFCKEGRVKEAKNVLAMMMKQGI--KPDVVTYSSLMD---------------GY 312
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A +TM H + Y+ +I C+ K VD+A ++ M H P +
Sbjct: 313 CLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 372
Query: 301 FSVLALI 307
+ ALI
Sbjct: 373 ITYSALI 379
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 32 EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLS 91
++ V +LH QM NG+ D VT S LI +C LG + A +L + + G
Sbjct: 83 QYPTVVSLHPQMELNGIASDLVTCS-------ILINSFCQLGHIPFAFSVLAKILKNGYE 135
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
PD +++ +I G C ++ D + L + V M D+ +Y +L+N
Sbjct: 136 PDTITFTTLIKGLC------------LKGDIHQALHFHDKVIA--MGFHLDQVSYGTLIN 181
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
G+ A L R + V + I+G+ K +A ++ M++
Sbjct: 182 GLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISP 241
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVE--------LVKGFRMRGLVSEAARAHDTMLHGNHK 262
TY ALI C + K + LV GF G V EA M+ K
Sbjct: 242 NV--VTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIK 299
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
PD Y+ L+ +C V+KA +++ M H G
Sbjct: 300 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 332
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++PD T++ L ++A+C G + N M+ G+ PD +V
Sbjct: 271 MTSENINPDVYTFNIL-------VDAFCKEGRVKEAKNGLAMMMKQGIKPD-------IV 316
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GYC + V A IL M G++ SYNIVI+GFC+I+ +A +L EM
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYS------SLMNDYLAQGD----------MEKAYI 164
K+I + Y SL+ GL S LM+D Q D + K ++
Sbjct: 377 HHKQIFP-NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435
Query: 165 LDREIA------HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+D+ IA G T ++ I+GL K R +A+ I +
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI-----------------F 478
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ L+ N + +++GF GL EA M + PD Y +I
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDK 538
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA + M+ G +
Sbjct: 539 DENDKAEKLLREMITRGLL 557
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 56/330 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG+ P+ F + LIN +C G ++ +++ G PD +
Sbjct: 96 MEYRGIKPN-------FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPD-------TI 141
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N I G+C G++ +AL + +G D VSY +I+G C++ E A EL +
Sbjct: 142 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV 201
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
D K +++++ V+Y +++ + + YS+L++ + G
Sbjct: 202 DGK-LVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGK 260
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++ A L ++ + + T ++ ++ K+ R +EAK L M+ K TY
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI--KPDIVTY 318
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
++L++ C NE ++ RG V+ R+ YN +I C+
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMSHRG-VTATVRS---------------YNIVINGFCK 362
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
K VD+A ++ M H P++ + +LI
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C + +L+ +M+ + S ++VTY+ALI G+C +G++++A+
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRI-------SSNIVTYSALISGFCIVGKLKDAI 265
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--MEMDEKRILRMEEVVYESLM 137
G+ M ++PD ++NI++ FC+ G+ E K + M K+ ++ + V Y SLM
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCK---EGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G Y ++ A + ++H G + + ++ ING K +A
Sbjct: 323 DG-------------YCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
++ M TY++LI+ G G +S A D M
Sbjct: 370 MKLFKEMHHKQIFPNV--ITYNSLID---------------GLCKSGRISYALELIDLMH 412
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+PD Y+ ++ C+ VDKA + ++ G P+M++ LI
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
L + + M G+ P+ V++NI+I+ FC++ A+ + +IL+M YE
Sbjct: 89 VLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVL-----AKILKMG---YE--- 137
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D ++ + + +G + +A ++ G+ + V+ INGL K TR A
Sbjct: 138 ---PDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 194
Query: 198 KEILL---------------SMISNSCLSKTTHTTYDALIENCSNNEFKSLVE---LVKG 239
E+L ++I + C K + +D E S ++V L+ G
Sbjct: 195 LELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISG 254
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
F + G + +A + M N PD +N L+ C+ V +A N M+ G P
Sbjct: 255 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 314
Query: 300 MFS 302
+ +
Sbjct: 315 IVT 317
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+A C S +L+ +MI N + P+++TYN LIYG+ LG+++EA+
Sbjct: 197 YNTIIDALCKDKLVSDGYDLYSEMIVNKI-------HPNVITYNTLIYGFSILGQMKEAV 249
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+L M +SPD +++ ++ G C+ E KA + M ++R+
Sbjct: 250 GLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRV-------------- 295
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
D YSSLM+ Y ++ KA L + G + ++ INGL K EA
Sbjct: 296 EPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAAN 355
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ M S++ T +Y++LI+ L K R+ + HD
Sbjct: 356 LFKEMHSSNMTPDT--VSYNSLIDG-----------LCKSGRISDVWDLLVEMHDI---- 398
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ YN L+ C+ VDKA + ++ G P+M++ L+
Sbjct: 399 GQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILV 446
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P+ T ++L IN CL G+ K HD +I G + V+
Sbjct: 115 ILKLGYQPNTVTLTTL-------INGLCLNGQIRKALYFHDHVIAKGFHLNHVS------ 161
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C G + AL +L + + + PD V YN +I C+ + Y+L EM
Sbjct: 162 -YGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEM 220
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+I + Y +L+ G S G M++A L +++ + +T
Sbjct: 221 IVNKI-HPNVITYNTLIYGFS-------------ILGQMKEAVGLLNQMSMKNISPDVLT 266
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++GL K+ ++A+ +L MI + TY +L++ G+
Sbjct: 267 FTTLVDGLCKQGEVKKARHVLAVMIKQRV--EPDIVTYSSLMD---------------GY 309
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A +T+ P+ YN +I C+ K V++A N++ M P
Sbjct: 310 FLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDT 369
Query: 301 FSVLALI 307
S +LI
Sbjct: 370 VSYNSLI 376
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 45/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + + PD TYSSL + YF L E +K +L + + GV +P++
Sbjct: 290 MIKQRVEPDIVTYSSLMDGYF-------LVKEVNKAKHLFNTLPLRGV-------TPNVF 335
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G C V EA + + M ++PD VSYN +I G C+ ++L +EM
Sbjct: 336 SYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEM 395
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ I + V+ Y+SL++ ++KA L ++I G T
Sbjct: 396 HD--IGQPANVI------------TYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYT 441
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++GL K R +A+EI +++ + Y+ ++ NEF
Sbjct: 442 YTILVDGLCKNGRLEDAQEIYHDLLTKG--YPLNVSMYNVMV-----NEFCK-------- 486
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
GL EA M P+ Y LI DKA + M+ G +
Sbjct: 487 --EGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVRGLL 541
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD TY++L I CL G+ + N HD+++ G+ D V
Sbjct: 71 ILKLGYQPDIITYTTL-------IRGLCLNGQVKESLNFHDRLVSQGIKLDH-------V 116
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G+ AL +LR + PD V YN +I G C+ + A++L EM
Sbjct: 117 SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM 176
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
EKR+ VV Y+SL+ + G ++KA+ L E+ T
Sbjct: 177 FEKRVF--PNVV------------TYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCT 222
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE--------NCSNNEFKS 232
+ ++GL K+ + REAK ++ M+ TY+AL++ + N F
Sbjct: 223 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDV--FTYNALMDGYFLVKEAGKAKNVFNI 280
Query: 233 LVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
+ + ++ G ++ EA + M + N PD Y+ LI C+
Sbjct: 281 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 340
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ A M G P++ + +LI
Sbjct: 341 INSALKYVDEMHDRGQPPNVITYTSLI 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 40/284 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C +L+ +M V P+ +VTY +LIYG+C +G++++A
Sbjct: 153 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPN-------VVTYTSLIYGFCIVGQLDKAF 205
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+L M ++P+ ++N ++ G C+ GK E K +V + +G
Sbjct: 206 GLLNEMVLKNVNPNVCTFNTLVDGLCK---EGKMREAK------------SLVAVMMKEG 250
Query: 140 L-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y++LM+ Y + KA + +A G + + SV I+GLSK EA
Sbjct: 251 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 310
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++ M + + + Y +LI+ G G ++ A + D M
Sbjct: 311 DLFEGMRNENVIPDV--VAYSSLID---------------GLCKSGRINSALKYVDEMHD 353
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
P+ Y LI C+ VDKA + ++ G +M++
Sbjct: 354 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 397
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 32/265 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ PD TY++L + YF L E K N+ + M GV D +
Sbjct: 246 MMKEGVGPDVFTYNALMDGYF-------LVKEAGKAKNVFNIMAQMGVTCD-------VH 291
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y+ +I G + ++EA+ + GM + PD V+Y+ +I G C+ A + EM
Sbjct: 292 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 351
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + V+ Y+SL++ ++KA L ++I G + T
Sbjct: 352 HDRG--QPPNVI------------TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 397
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ++GL K R +A+++ ++ TY +I C + F + L+
Sbjct: 398 YNILVDGLCKDGRLTDAQKVFQDLLMKG--HNVDVVTYSIMINGLCKESLFDEALTLLSK 455
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPD 264
+G V +A A++T+++ + D
Sbjct: 456 MEDKGCVPDAI-AYETIINAFFEKD 479
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY SLI+ C G + D+M G P+++TY +LI C +V++A
Sbjct: 327 AYSSLIDGLCKSGRINSALKYVDEMHDRG-------QPPNVITYTSLIDALCKSHQVDKA 379
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ +L+ + + G+ + +YNI++ G C+ + R+ ++V + LM+
Sbjct: 380 IALLKKIKDQGIQANMYTYNILVDGLCK---------------DGRLTDAQKVFQDLLMK 424
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G + D YS ++N + ++A L ++ G + +++ IN +K +A
Sbjct: 425 GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKA 484
Query: 198 KEILLSMISNSCL 210
+++L MI+ L
Sbjct: 485 EKLLREMIARRLL 497
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D+G ++++ Y L++ C G + + ++ G + +VTY+ +I G
Sbjct: 388 DQGIQANMY-TYNILVDGLCKDGRLTDAQKVFQDLLMKG-------HNVDVVTYSIMING 439
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
C +EAL +L M + G PDA++Y +I+ F KA +L EM +R+L
Sbjct: 440 LCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIARRLL 497
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+LI CL G+ + HD+++ G D V+Y LI+G C +G AL +
Sbjct: 138 TLIKGLCLKGQIHQAFLFHDKLVALGFHLD-------QVSYGTLIHGLCKVGETRAALDL 190
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
L+ + + +AV YN VI G C+ + A++L EM K I VV
Sbjct: 191 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI--SPNVV--------- 239
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
YS+L++ + G ++ A L +I + + T ++ ++G K + +E K +
Sbjct: 240 ---TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 296
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M+ + TY++L++ G+ + V+ A +TM G
Sbjct: 297 AMMMKQGIIPDV--VTYNSLMD---------------GYCLVKEVNTAKSIFNTMAQGGV 339
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI C+ K VDKA N++ M +P++ + +LI
Sbjct: 340 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 385
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 132/321 (41%), Gaps = 81/321 (25%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGE 32
M+ +G+SP+ TYS+L + +F L++ +C +
Sbjct: 229 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 288
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + M+ G++PD +VTYN+L+ GYC + V A I M + G++P
Sbjct: 289 MKEGKTVFAMMMKQGIIPD-------VVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 341
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE--------- 143
D SYNI+I+GFC+I++ KA L EM K I+ V Y SL+ GLS
Sbjct: 342 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP-NVVTYNSLIDGLSKSGRISYALQL 400
Query: 144 -----------------------------DAYSSLMNDYLAQGDMEKAY----ILDREIA 170
D +L+ + QG Y ++D
Sbjct: 401 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 460
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE 229
+GY T +V I+G KK EA +L M +SC+ TY+ I + NNE
Sbjct: 461 VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNA--VTYEITIRSLLDNNE 518
Query: 230 FKSLVELVKGFRMRGLVSEAA 250
+L + RGL++ +A
Sbjct: 519 NDKAEKLFREMITRGLLNRSA 539
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I C + +L+ +M+ G+ SP++VTY+ALI G+ +G++++A+
Sbjct: 206 YNTVIYGMCKDKHVNDAFDLYSEMVSKGI-------SPNVVTYSALISGFFVVGKLKDAI 258
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM-Q 138
+ + + PD ++NI++ GFC+ R+ ++ + V+ +M Q
Sbjct: 259 DLFNKIILENIKPDGYTFNILVDGFCKDRK----------------MKEGKTVFAMMMKQ 302
Query: 139 GL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G+ D Y+SLM+ Y ++ A + +A G + + ++ ING K + +A
Sbjct: 303 GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 362
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ M + + TY++LI+ G G +S A + D M
Sbjct: 363 MNLFNEMHCKNIIPNVV--TYNSLID---------------GLSKSGRISYALQLVDQMH 405
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN +I + VDKA + T+ G P M++ LI
Sbjct: 406 DRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 455
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 139/319 (43%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++PD T+S L ++A C G ++ N+ M+ GV+PD +V
Sbjct: 260 MVLKNINPDVYTFSIL-------VDALCKDGNITRAKNMLAVMMKQGVIPD-------VV 305
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GYC + V +A + M +G++P A SYNI+I+G +I+ +A L EM
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K I + V Y SL+ GL +D Y+SL++
Sbjct: 366 CCKGIAP-DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++I G T ++ I+GL K R + A+++
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVF----------------Q 468
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D LI+ S N + + ++ G GL +EA M + PD Y +I R
Sbjct: 469 DLLIKGYSVNAWTYNI-MINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527
Query: 279 KNVDKAYNMYTRMVHYGFV 297
+KA + M+ G +
Sbjct: 528 DENEKAEKLLREMIIRGLL 546
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +IN+ C S L+ +MI + SP +VT+N+LI G+C +G+++EA
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEMITKRI-------SPDVVTFNSLILGFCVVGQLKEAF 254
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M ++PD +++I++ C+ + I R + ++ + QG
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCK---------------DGNITRAKNMLAVMMKQG 299
Query: 140 -LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D YSSLM+ Y ++ KA + ++ G + + ++ INGL K EA
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M T TY++LI+ G G +S A + D M H
Sbjct: 360 SLFKEMCCKGIAPDT--VTYNSLID---------------GLCKLGRISYAWQLVDEM-H 401
Query: 259 GNHKP-DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N P D YN LI C+ ++DKA + ++ G P M++ LI
Sbjct: 402 NNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILI 451
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 38/289 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +LIN CL G+ + + HD +I G D V+Y LI G C +G A
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLD-------QVSYRTLINGLCKIGETRAA 183
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L +L+ + ++ D V YNI+I+ C+ + AY+L EM KRI + V + SL+
Sbjct: 184 LQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRI-SPDVVTFNSLIL 242
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
G + G +++A+ L E+ + T S+ ++ L K AK
Sbjct: 243 G-------------FCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+L M+ + TY +L++ G+ + V++A TM
Sbjct: 290 NMLAVMMKQGVIPDV--VTYSSLMD---------------GYCLVNEVNKAKHVFSTMSR 332
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P YN +I + K VD+A +++ M G P + +LI
Sbjct: 333 LGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLI 381
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGK 112
+P++VT+N L+ YC LG + A I + ++G P +++N +I+G C +++E
Sbjct: 91 TPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH 150
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
++ + + +++V Y +L+ GL G+ A + ++I
Sbjct: 151 FHDHVIALG----FHLDQVSYRTLINGLC-------------KIGETRAALQMLKKIEGK 193
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKS 232
++ V ++ IN L K +A ++ MI T + D + N
Sbjct: 194 LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI-------TKRISPDVVTFN-------- 238
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
L+ GF + G + EA M+ N PD ++ L+ C+ N+ +A NM M+
Sbjct: 239 --SLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296
Query: 293 HYGFVPHMFSVLALI 307
G +P + + +L+
Sbjct: 297 KQGVIPDVVTYSSLM 311
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ +M+ + SP + TYNALI G+C +G++++A+
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEMVSKRI-------SPDVFTYNALISGFCIVGKLKDAI 97
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M ++PD ++NI++ FC+ E KM+ + K +L M + QG
Sbjct: 98 GLFNKMTLENINPDMYTFNILVDAFCK--------EGKMK-EAKNVLAM------MMKQG 142
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ + YS+LM+ Y + KA + +A G + + S+ INGL K T EA
Sbjct: 143 MKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAM 202
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M + TY++LI+ G G +S A + D M
Sbjct: 203 NLFEEMHCRKIIPDV--VTYNSLID---------------GLCKLGKISYALKLVDEMHD 245
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD Y+ ++ C+ VDKA + T++ G P+M++ LI
Sbjct: 246 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 294
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 54/294 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++PD T++ L ++A+C G+ + N+ M+ G+ P++V
Sbjct: 103 MTLENINPDMYTFNIL-------VDAFCKEGKMKEAKNVLAMMMKQGM-------KPNVV 148
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+AL+ GYC + +V +A I M + G++PD SY+I+I+G C+I+ +A L EM
Sbjct: 149 TYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEM 208
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
++I+ + V Y SL+ GL D YSS+++
Sbjct: 209 HCRKIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 267
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++ G T ++ I+GL K R +A H +
Sbjct: 268 VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDA-----------------HNIF 310
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
+ L+ N + ++ GF +GL EA M + P+ Y +I
Sbjct: 311 EDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+Y LI G C +G AL +LR + + P V YN +I G C+ + A++L E
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M KRI D Y++L++ + G ++ A L ++ + +
Sbjct: 68 MVSKRI--------------SPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMY 113
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T ++ ++ K+ + +EAK +L M+ K TY AL++ G
Sbjct: 114 TFNILVDAFCKEGKMKEAKNVLAMMMKQG--MKPNVVTYSALMD---------------G 156
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM G PD Y+ LI C+ K D+A N++ M +P
Sbjct: 157 YCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPD 216
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 217 VVTYNSLI 224
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y S+I++ C + +L+ +M + SP++VTY+ALI G+C +G++++A+
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAKRI-------SPNVVTYSALISGFCIVGKLKDAI 209
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M ++P+ +++I++ GFC+ E R+ + V+ + QG
Sbjct: 210 DLFNKMILENINPNVYTFSILVDGFCK---------------EGRVKEAKNVLAMMMKQG 254
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D YSSLM+ Y ++ KA + ++H G + + S+ ING K EA
Sbjct: 255 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAM 314
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++ M TY ALI+ G G +S A D M
Sbjct: 315 KLFKEMHHKQIFPDV--ITYSALID---------------GLCKSGRISYALELVDEMHD 357
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+PD YN ++ C+ +VDKA + T++ G P M + L+
Sbjct: 358 RGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 406
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 48/320 (15%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
EG L N LIN++C G ++ +++ NG PD +T+ LI G
Sbjct: 43 EGIKLDLVNCSI-LINSFCQLGHIPFAFSVLAKILKNGYEPD-------TITFTTLIKGL 94
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C G + +AL + MG D VSY +I+G C++ E A EL +D K +++++
Sbjct: 95 CLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGK-LVQLD 153
Query: 130 EVVYESLMQGLSDE----DA------------------YSSLMNDYLAQGDMEKAYILDR 167
V+Y S++ + + DA YS+L++ + G ++ A L
Sbjct: 154 AVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFN 213
Query: 168 EIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
++ + T S+ ++G K+ R +EAK +L M+ K TY +L++
Sbjct: 214 KMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI--KPDVVTYSSLMD---- 267
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
G+ + V++A +TM H + Y+ +I C+ K VD+A +
Sbjct: 268 -----------GYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKL 316
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+ M H P + + ALI
Sbjct: 317 FKEMHHKQIFPDVITYSALI 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ ++P+ T+S L ++ +C G + N+ M+ G+ PD +V
Sbjct: 215 MILENINPNVYTFSIL-------VDGFCKEGRVKEAKNVLAMMMKQGIKPD-------VV 260
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GYC + V +A I M G++ + SY+I+I+GFC+I+ +A +L EM
Sbjct: 261 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEM 320
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K+I + + Y +L+ GL D Y+S+++ +
Sbjct: 321 HHKQIFP-DVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHH 379
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++ G + T ++ + GL + + +A+++ +
Sbjct: 380 VDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKV-----------------F 422
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ L+ N + + +++GF +GL EA M PD Y +I+
Sbjct: 423 EDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 482
Query: 279 KNVDKAYNMYTRMVHYGFV 297
D A + M+ G +
Sbjct: 483 DENDMAEKLLREMIMRGLL 501
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 156/367 (42%), Gaps = 76/367 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
ML + ++P+ TYS L +NA C ++ + + + D M V PD V +
Sbjct: 260 MLRKNVTPNVVTYSCL-------MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P+ VTYNA+I G C GRV++ALGIL M + G P
Sbjct: 313 GLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP 372
Query: 93 DAVSYNIVISGFCRIREPGKAYELK---------------------MEMDEKRILRMEEV 131
D V+Y+ ++ G C + + +A +L E+ ++R LR +
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKR 432
Query: 132 VYESLMQ-GL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
VY ++++ G S+ Y+ L++ YL+ G + KA L ++ G + T +V INGL
Sbjct: 433 VYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492
Query: 190 K------------KAR---TREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
K K R TR +++++ C + + E + N +V
Sbjct: 493 KMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVV 552
Query: 235 E---LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
++ G G V A ML+ N PD ++ LI + +D+A ++Y RM
Sbjct: 553 SFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERM 612
Query: 292 VHYGFVP 298
V G VP
Sbjct: 613 VSCGHVP 619
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 39/303 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL G + +++N + L+ +C G+ K +L M N ++PD V+YN
Sbjct: 118 GLIMKRGFHLNVYN-FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPD-------CVSYNT 169
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I G C R+ EA + + M P++V+++ +I GFC+ + + + L EM++
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK-- 227
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ +E V+ YS+L++ + ++GD+E+ L E+ VT S
Sbjct: 228 -MGLEGDVF-----------VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+N L KK + +EA ++L +M C + Y L + S N G
Sbjct: 276 MNALCKKQKWKEAAQMLDTM--TGCKVRPDVVAYTVLADGLSKN---------------G 318
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
S+A + D M+ +P+ YN +I C+ VD A + M G P + +
Sbjct: 319 RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYS 378
Query: 305 ALI 307
L+
Sbjct: 379 TLV 381
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 35/227 (15%)
Query: 2 LWR-----GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS 56
LW+ G+SP+ TY+ LIN C S L ++ +G
Sbjct: 468 LWKDAVDSGISPNAATYT-------VLINGLCKMQMLSIAKGLFNKKRASGT-------R 513
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++ YN L+ C VE+A + + M PD VS+NI+I G + + A
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK-- 571
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
E ++ M + D +S L+N +L G +++A L + G++
Sbjct: 572 ------------ELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVP 619
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDAL 221
++V + G S K +T + +L M + SK T T L
Sbjct: 620 DAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACL 666
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y S+I++ C + +L+ +M + SP++VTY+ALI G+C +G++++A+
Sbjct: 45 YSSIIDSMCKDKHVNDAFDLYSEMAAKRI-------SPNVVTYSALISGFCIVGKLKDAI 97
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M ++P+ +++I++ GFC+ E R+ + V+ + QG
Sbjct: 98 DLFNKMILENINPNVYTFSILVDGFCK---------------EGRVKEAKNVLAMMMKQG 142
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D YSSLM+ Y ++ KA + ++H G + + S+ ING K EA
Sbjct: 143 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAM 202
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++ M TY ALI+ G G +S A D M
Sbjct: 203 KLFKEMHHKQIFPDV--ITYSALID---------------GLCKSGRISYALELVDEMHD 245
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+PD YN ++ C+ +VDKA + T++ G P M + L+
Sbjct: 246 RGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 294
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ ++P+ T+S L ++ +C G + N+ M+ G+ PD +V
Sbjct: 103 MILENINPNVYTFSIL-------VDGFCKEGRVKEAKNVLAMMMKQGIKPD-------VV 148
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GYC + V +A I M G++ + SY+I+I+GFC+I+ +A +L EM
Sbjct: 149 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEM 208
Query: 121 DEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGD 158
K+I + + Y +L+ GL D Y+S+++ +
Sbjct: 209 HHKQIFP-DVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHH 267
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++ G + T ++ + GL + + +A+++ +
Sbjct: 268 VDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKV-----------------F 310
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ L+ N + + +++GF +GL EA M PD Y +I+
Sbjct: 311 EDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 370
Query: 279 KNVDKAYNMYTRMVHYGFV 297
D A + M+ G +
Sbjct: 371 DENDMAEKLLREMIMRGLL 389
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 33/249 (13%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+Y LI G C +G AL +LR + + DAV Y+ +I C+ + A++L E
Sbjct: 8 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSE 67
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M KRI VV YS+L++ + G ++ A L ++ +
Sbjct: 68 MAAKRI--SPNVV------------TYSALISGFCIVGKLKDAIDLFNKMILENINPNVY 113
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T S+ ++G K+ R +EAK +L M+ K TY +L++ C NE
Sbjct: 114 TFSILVDGFCKEGRVKEAKNVLAMMMKQGI--KPDVVTYSSLMDGYCLVNE--------- 162
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
V++A +TM H + Y+ +I C+ K VD+A ++ M H P
Sbjct: 163 -------VNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFP 215
Query: 299 HMFSVLALI 307
+ + ALI
Sbjct: 216 DVITYSALI 224
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD N Y L+ C G+ + + ++ G D + Y
Sbjct: 281 QGIRPD-------MNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLD-------VYAYT 326
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G+C G +EAL +L M E G PDA +Y I+I E A +L EM +
Sbjct: 327 VMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 386
Query: 124 RILRME 129
+L +E
Sbjct: 387 GLLVIE 392
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 47/311 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+++C +L+ +MI + P+ +VT+N+LIYG+C +G+ EEA+
Sbjct: 198 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN-------VVTFNSLIYGFCIVGQFEEAV 250
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M +P+ ++NI++ G C+ E + R + V+ + Q
Sbjct: 251 GLFNEMILKNTNPNVYTFNILVDGLCK---------------EGEVKRAKSVLTVMIKQH 295
Query: 140 L-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y+SLM+ Y ++ KA + +A G + SV INGL K EA
Sbjct: 296 VEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAV 355
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL------------ 245
+ M S S T TY++LI+ C + + L+ +++ L
Sbjct: 356 ILFKEMHSKSLTPNT--ITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSIL 413
Query: 246 ---VSEAARAHDTM-----LHGNHKPDGGV-YNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ ++ R D +H +P V Y LI C+ N+DKA ++T+M G
Sbjct: 414 IDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDLGV 473
Query: 297 VPHMFSVLALI 307
P++++ LI
Sbjct: 474 EPNVYTYNILI 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 53/326 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD T S L IN +C G+ + ++ +++ G P+ VT
Sbjct: 83 KGIQPDIFTLSIL-------INCFCQLGQINFAFSILGKILKLGY-------EPNTVTLT 128
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI G C G V +AL + G + VSY +I+G C+ E A +L +++
Sbjct: 129 TLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETRAALQLLRKIEGL 188
Query: 124 RILRMEEVVYESLMQGLSDE----DAY------------------SSLMNDYLAQGDMEK 161
++R + ++Y +++ + DAY +SL+ + G E+
Sbjct: 189 LLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEE 248
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A L E+ T ++ ++GL K+ + AK +L MI H D +
Sbjct: 249 AVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQ-------HVEPDVV 301
Query: 222 IENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
N L+ G+ + V++A DT+ P+ Y+ +I C+ K V
Sbjct: 302 TYN----------SLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMV 351
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D+A ++ M P+ + +LI
Sbjct: 352 DEAVILFKEMHSKSLTPNTITYNSLI 377
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 30/206 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + + PD TY+SL + YF L E +K + + D + GV +P++
Sbjct: 291 MIKQHVEPDVVTYNSLMDGYF-------LVKEVNKATYVFDTLARRGV-------TPNVR 336
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y+ +I G C + V+EA+ + + M L+P+ ++YN +I G C+ G+ ++ +
Sbjct: 337 SYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCK---SGRISDVWYLI 393
Query: 121 DEKRI--LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
DE +I L ++ VY YS L++ G + A+ L E+ G +
Sbjct: 394 DEMQIKDLGVKPDVY-----------TYSILIDRLCKSGRIADAWYLIDEMHDRGQPANV 442
Query: 179 VTESVFINGLSKKARTREAKEILLSM 204
VT + I+GL K +A + M
Sbjct: 443 VTYTSLIDGLCKNHNLDKAIALFTKM 468
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 108/273 (39%), Gaps = 41/273 (15%)
Query: 53 VTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK 112
+ + + +N ++ L A+ + M G+ PD + +I+I+ FC++ +
Sbjct: 48 INPTQPIFEFNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINF 107
Query: 113 AYELKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
A+ + +IL++ V +L++GL G++ KA +
Sbjct: 108 AFSIL-----GKILKLGYEPNTVTLTTLIKGLC-------------LNGEVRKALYFHND 149
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEIL----------------LSMISNSCLSK 212
+ G+ V+ INGL K TR A ++L ++I + C K
Sbjct: 150 VIAKGFYLNEVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDK 209
Query: 213 TTHTTYDALIENCSNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
YD E + ++V L+ GF + G EA + M+ N P+ +N
Sbjct: 210 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFN 269
Query: 270 FLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
L+ C+ V +A ++ T M+ P + +
Sbjct: 270 ILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVT 302
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ +M+ + SP + TYNALI G+C +G++++A+
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEMVSKRI-------SPDVFTYNALISGFCIVGKLKDAI 97
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M ++PD ++NI++ FC+ E KM+ + K +L M + QG
Sbjct: 98 GLFNKMTLENINPDMYTFNILVDAFCK--------EGKMK-EAKNVLAM------MMKQG 142
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ + YS+LM+ Y + KA + +A G + + S+ INGL K T EA
Sbjct: 143 MKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAM 202
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M + TY++LI+ G G +S A + D M
Sbjct: 203 NLFEEMHCRKIIPDV--VTYNSLID---------------GLCKSGKISYALKLVDEMHD 245
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD Y+ ++ C+ VDKA + T + G P+M++ LI
Sbjct: 246 RGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILI 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++PD T++ L ++A+C G+ + N+ M+ G+ P++V
Sbjct: 103 MTLENINPDMYTFNIL-------VDAFCKEGKMKEAKNVLAMMMKQGM-------KPNVV 148
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+AL+ GYC + +V +A I M + G++PD SY+I+I+G C+I+ +A L EM
Sbjct: 149 TYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEM 208
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
++I+ + V Y SL+ GL D YSS+++
Sbjct: 209 HCRKIIP-DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 267
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L + G T ++ I+GL K R +A H +
Sbjct: 268 VDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDA-----------------HNIF 310
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ L+ N + ++ GF +GL EA M + P+ Y +I
Sbjct: 311 EDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDK 370
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA + M+ G +
Sbjct: 371 DENDKAEKLLREMITRGLL 389
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+Y LI G C +G AL +LR + + P V YN +I G C+ + A++L E
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M KRI D Y++L++ + G ++ A L ++ + +
Sbjct: 68 MVSKRI--------------SPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMY 113
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T ++ ++ K+ + +EAK +L M+ K TY AL++ G
Sbjct: 114 TFNILVDAFCKEGKMKEAKNVLAMMMKQG--MKPNVVTYSALMD---------------G 156
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM G PD Y+ LI C+ K D+A N++ M +P
Sbjct: 157 YCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPD 216
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 217 VVTYNSLI 224
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 68/332 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M +G P+E TY+SL ++ CL G+ K +L ++M+ N +P+ +T
Sbjct: 271 MFLKGCVPNEVTYNSL-------VHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVD 323
Query: 55 ----------GSPSLVT------------YNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
G LV+ Y++LI G G+ E + + + M E G P
Sbjct: 324 GFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKP 383
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ + Y+ +I G CR +P +A E +EM K + YSSLM
Sbjct: 384 NTIVYSALIDGLCREGKPDEAKEYLIEMKNK--------------GHTPNSFTYSSLMWG 429
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
Y GD+ KA ++ +E+ + V S+ INGL K + +EA + M+S K
Sbjct: 430 YFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI--K 487
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK--PDGGVYNF 270
Y ++I GF LV + + + ML N K PD YN
Sbjct: 488 LDVVAYSSMIH---------------GFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNI 532
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
L+ C +V +A ++ M+ G P +
Sbjct: 533 LLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 31/247 (12%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ L++G C GR++EA+ +L M G P+ V++N++IS C+ + +A +L M
Sbjct: 212 TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 271
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + EV Y SL+ GL +G ++KA L + + + +T
Sbjct: 272 FLKGCVP-NEVTYNSLVHGLC-------------LKGKLDKAMSLLNRMVANKCVPNDIT 317
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++G K R + +L+S+ Y NEF S L+ G
Sbjct: 318 FGTLVDGFVKHGRALDGVRVLVSL---------EEKGYRG-------NEF-SYSSLISGL 360
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G + M+ KP+ VY+ LI CR D+A M + G P+
Sbjct: 361 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 420
Query: 301 FSVLALI 307
F+ +L+
Sbjct: 421 FTYSSLM 427
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ ++P+ T S L ++A+C G+ + + ++ NGV P++V
Sbjct: 266 MILENINPNVYTMSIL-------VDAFCKDGKPKEAKAVVAVLMKNGV-------KPNVV 311
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI GYC + +V +A IL M + G+ D SY+I+I+GFC+I+ +A +L EM
Sbjct: 312 TYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEM 371
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
+ R L + + Y SL+ GL DA Y+SL+N
Sbjct: 372 -QGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHH 430
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L R+ G T ++ I GL R ++A+ +
Sbjct: 431 VDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVF----------------Q 474
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D LI+ N + + +++GF GL EA M P+ Y +I+ +
Sbjct: 475 DLLIKG-YNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKK 533
Query: 279 KNVDKAYNMYTRMVHYGFV 297
D A + M+ G +
Sbjct: 534 DENDMAEKLLREMIRRGLL 552
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I CL GE + + HD+++ G + V+Y ALI G C +G AL +
Sbjct: 140 TIIKGLCLKGEVREALHFHDKVVAQGF-------QLNQVSYGALINGLCKVGETRAALEL 192
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + + P+ V Y ++I G C+ + A+ L EM KRI
Sbjct: 193 LRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRI--------------FP 238
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D Y++L++ + G ++ A L ++ + T S+ ++ K + +EAK ++
Sbjct: 239 DVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVV 298
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
++ N K TY++LI+ G+ + V++A +TM
Sbjct: 299 AVLMKNGV--KPNVVTYNSLID---------------GYCLVKQVNKAEVILNTMAQRGV 341
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D Y+ +I C+ K VD+A +++ M VP + +LI
Sbjct: 342 IADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLI 387
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C + NL+ +MI + PD +VTYN LI G+C +G++++A+
Sbjct: 208 YTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPD-------VVTYNNLISGFCVVGQLKDAI 260
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+L M ++P+ + +I++ FC+ +P +A + VV + G
Sbjct: 261 GLLHKMILENINPNVYTMSILVDAFCKDGKPKEA---------------KAVVAVLMKNG 305
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ + Y+SL++ Y + KA ++ +A G +++ + S+ ING K EA
Sbjct: 306 VKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAI 365
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++ M + T TY +LI+ G G +S+A M
Sbjct: 366 DLFKEMQGRQLVPDTI--TYSSLID---------------GLCKSGRISDAWELVSEMSD 408
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+P+ YN L+ C+ +VDKA + + G P + + LI
Sbjct: 409 RGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILI 457
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 54/318 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ ++PD T++ L ++ +C G + N+ M+ G+ P +V
Sbjct: 168 MILENINPDVYTFTIL-------VDGFCKEGRVKEAKNVLAMMMIQGI-------KPGVV 213
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GY + +V +A I M ++G+SPD SY+I+I+GFC+I+ +A EL EM
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
K+I+ V Y SL+ GL YSS+++
Sbjct: 274 HHKQIIP-NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++ A L ++ + G T ++ I GL + + +A+++
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVF----------------E 376
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D L++ + N + V +++GF +GL EA M P+ Y +I+ +
Sbjct: 377 DLLVKGHNLNVYTYTV-MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKK 435
Query: 279 KNVDKAYNMYTRMVHYGF 296
+ A + M+ F
Sbjct: 436 DENEMAEKLLCEMIETNF 453
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 48/282 (17%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREP--- 110
P+LV N LI +C LG + A +L + +MG P+ ++ N +I G C +I +
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 111 -GK-------------------AYELKMEMD----EKRILRMEEVVYESLMQGLSDE-DA 145
GK Y + +D E R+ + V+ ++QG+
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 146 YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
Y+SLM+ Y + KA + +A G + + S+ ING K EA E+L M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 206 SNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
+ TY +LI+ G G +S A + D M P+
Sbjct: 275 HKQIIPNV--VTYSSLID---------------GLCKSGKISYALKLVDEMHDRGQPPNI 317
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
Y+ ++ C+ VD A + T+M + G P+M++ LI
Sbjct: 318 VTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 36/316 (11%)
Query: 1 MLWR-GLSPDEGTYSS---LFNAYFSLINAYCLGGEFSKVSNLHDQM-IHNGVLPDFVTG 55
ML R G P + S L N +F+ I + F +++ D + + N +L
Sbjct: 1 MLLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQ--NP 58
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P + +N ++ L + + M G+ P+ V+ NI+I+ FC++ A+
Sbjct: 59 TPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFS 118
Query: 116 LKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+ +IL+M + +L++GL + + + G ++ A L ++
Sbjct: 119 V-----LTKILKMGYKPNTITLNTLIKGLC---LNGKIHDKHCIVGKLKDAVDLFNKMIL 170
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFK 231
+ + T ++ ++G K+ R +EAK +L M+ K TY++L++
Sbjct: 171 ENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI--KPGVVTYNSLMD-------- 220
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G+ + V++A +TM PD Y+ LI C+ K +D+A + M
Sbjct: 221 -------GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
Query: 292 VHYGFVPHMFSVLALI 307
H +P++ + +LI
Sbjct: 274 HHKQIIPNVVTYSSLI 289
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 153/349 (43%), Gaps = 59/349 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + G++P+ T++ L IN +C G ++ +++ G PD ++
Sbjct: 109 MEFEGINPNFVTFNIL-------INCFCQLGLIPFAFSVLAKILKMGYEPD-------II 154
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N I G+C G++ +AL + +G D VSY +I+G C++ E A +L +
Sbjct: 155 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV 214
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
D K ++++ V+Y +++ G+ D YS+L+ + G
Sbjct: 215 DGK-LVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 273
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++ A L ++ + + T ++ ++G K+ R ++AK +L M+ K +T+
Sbjct: 274 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI--KPNVSTF 331
Query: 219 DALIEN-CSNNEFK-------------------SLVELVKGFRMRGLVSEAARAHDTMLH 258
+ L++ C + + K + L+ G+ + V++A + +TM
Sbjct: 332 NTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ 391
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ YN +I C+ K VDKA ++ M H +P + + +LI
Sbjct: 392 RGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLI 440
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 67/267 (25%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGE 32
M+ + +SPD TYS+L +F L++ +C G
Sbjct: 249 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 308
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGS----------------------------PSLVTYNA 64
K N+ D M+ + P+ T + P++VTY +
Sbjct: 309 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 368
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC + +V +A I M + G++ + SYNI+I+GFC+I++ KA +L +EM K
Sbjct: 369 LMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH 428
Query: 125 ILRMEEVVYESLMQGLSDEDAYS---SLMNDYLAQGDMEKAYI-------LDREIAHDGY 174
I+ + V Y SL+ GL S L+N+ +G L ++ G
Sbjct: 429 IIP-DVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGI 487
Query: 175 LSESVTESVFINGLSKKARTREAKEIL 201
T+++ I GL + + A+++
Sbjct: 488 QPNMHTDTILIKGLCQSGKLEAARKVF 514
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 61/345 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++ I +CL G+ + N HD+++ G D V
Sbjct: 144 ILKMGYEPDIITLNTF-------IKGFCLKGQIHQALNFHDKLVALGFHLD-------QV 189
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G AL +LR + + +AV YN VI G + + A++L EM
Sbjct: 190 SYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEM 249
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
KRI + V Y +L++G D ++ L++ + +G
Sbjct: 250 VAKRI-SPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 308
Query: 159 MEKAY-ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
++KA +LD + D + S T + ++G K + +E K + M+ K T
Sbjct: 309 LKKAKNVLDMMMIQDIKPNVS-TFNTLVDGFCKDRKMKEGKTVFAMMMKQGI--KPNVVT 365
Query: 218 YDALIE--------NCSNNEFKSLVE------------LVKGFRMRGLVSEAARAHDTML 257
Y +L++ N + F ++ + ++ GF V +A + M
Sbjct: 366 YCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMH 425
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
H + PD YN LI C+ + A+ + M G P++ +
Sbjct: 426 HKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 470
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 139/323 (43%), Gaps = 42/323 (13%)
Query: 12 TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCF 71
++ L N +F+ I F S++ H+ + D V+ SL+ N + + F
Sbjct: 28 SFQFLKNTHFNFIPYSSSKKNFIPYSSI-STTFHSNDVDDAVSLFNSLLHQNPTLTAFEF 86
Query: 72 ---LGRVEEA------LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
LG + ++ L + + M G++P+ V++NI+I+ FC++ A+ +
Sbjct: 87 NKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSV-----L 141
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+IL+M YE D ++ + + +G + +A ++ G+ + V+
Sbjct: 142 AKILKMG---YE------PDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYG 192
Query: 183 VFINGLSKKARTREAKEILL----------SMISNSCLS---KTTHTT-----YDALIEN 224
INGL K TR A ++L +++ N+ + K H Y ++
Sbjct: 193 TLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAK 252
Query: 225 CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
+ + + L++GF + G + +A + M+ N KPD +N L+ C+ + KA
Sbjct: 253 RISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKA 312
Query: 285 YNMYTRMVHYGFVPHMFSVLALI 307
N+ M+ P++ + L+
Sbjct: 313 KNVLDMMMIQDIKPNVSTFNTLV 335
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ +L+ +M+ G+ SP +VTYNALI G+C +G++++A
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGI-------SPDVVTYNALISGFCIVGKMKDAT 267
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M ++P+ ++NI++ GFC+ E+R+ + V+ + QG
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCK---------------ERRLKEAKNVLAMMMKQG 312
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y+SLM+ Y ++ KA + I+ G + S+ I+G K + EA
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M N+ + TY++LI+ G G +S A + D M H
Sbjct: 373 NLFKEMHCNNIIPDV--VTYNSLID---------------GLCKLGKISYALKLVDEM-H 414
Query: 259 GNHKP-DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P D YN ++ C+ VDKA + T+M G P + + L+
Sbjct: 415 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 61/301 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ +G+SPD TY+ +LI+ +C+ G+ ++L ++MI + P+ T +
Sbjct: 238 MVSKGISPDVVTYN-------ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P + TYN+L+ YC + V +A I + + G++P
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS----------- 141
+ SY+I+I GFC+I++ +A L EM I+ + V Y SL+ GL
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP-DVVTYNSLIDGLCKLGKISYALKL 409
Query: 142 -----------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
D+ Y+S+++ ++KA L ++ +G + T + ++GL K
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEA 249
R +A+ + ++ + Y A+I+ CS+ F ++L+ G + A
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDV--NIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527
Query: 250 A 250
Sbjct: 528 V 528
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 42/288 (14%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+LI CL G+ + HD+++ G + V+Y LI G C +G+ AL +
Sbjct: 147 TLIKGLCLKGQIHQALQFHDKVVALGF-------HLNKVSYGTLINGLCKVGQTSAALQL 199
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + + P+ V YN +I C+++ +A++L EM K G+S
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK---------------GIS 244
Query: 142 -DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
D Y++L++ + G M+ A L ++ + T ++ ++G K+ R +EAK +
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNV 304
Query: 201 LLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
L M+ K TY++L++ C E + RG V+ ++ M+HG
Sbjct: 305 LAMMMKQGI--KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG-VNPNIHSYSIMIHG 361
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ K VD+A N++ M +P + + +LI
Sbjct: 362 ---------------FCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 44/270 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ PD TY+SL ++ YCL E +K ++ + + GV +P++
Sbjct: 308 MMKQGIKPDVFTYNSL-------MDRYCLVKEVNKAKHIFNTISQRGV-------NPNIH 353
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y+ +I+G+C + +V+EA+ + + M + PD V+YN +I G C++ + A +L EM
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
++ + +++ Y S++ L D Y++L++ G
Sbjct: 414 HDRGVPH-DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+E A I+ ++ GY+ + + I G E+ ++L M N C+ TY
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA--VTY 530
Query: 219 DALIENCS---NNEFKSLVELVKGFRMRGL 245
+ +I CS +E +L++ RGL
Sbjct: 531 EIII--CSLFDKDENDKAEKLLREMITRGL 558
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 53/295 (17%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+S V +LH QM NG+ D LV + LI + LG+ + +L + +MG P
Sbjct: 88 YSTVVSLHRQMEFNGITSD-------LVILSILINCFSQLGQNPLSFSVLAKILKMGYEP 140
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRI---LRMEEVVYESLMQGL--------- 140
+ ++ +I G C + +A ++ +K + + +V Y +L+ GL
Sbjct: 141 NVITLTTLIKGLCLKGQIHQA----LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196
Query: 141 -------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
+ Y+++++ + +A+ L E+ G + VT + I+G
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVS 247
+ ++A ++ MI EN + N + + LV GF +
Sbjct: 257 FCIVGKMKDATDLFNKMI----------------FENINPNVYTFNI-LVDGFCKERRLK 299
Query: 248 EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
EA M+ KPD YN L+ +C K V+KA +++ + G P++ S
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 37/229 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ ++P T+S L ++A+C G+ + N+ M+ V P++V
Sbjct: 270 MILENINPTVYTFSIL-------VDAFCKEGKVKEAKNVFVVMMKKDV-------KPNIV 315
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GYC + V +A I M ++G++PD SY+I+ISGFC+I+ +A +L EM
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
K+I + V Y SL+ GL Y+SL++
Sbjct: 376 HCKQIFP-DVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHH 434
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
++KA L ++ T ++ INGL K R ++A+++ ++ N
Sbjct: 435 VDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVN 483
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G PD T ++L I CL G+ K + HD+++ G + V
Sbjct: 130 ILKKGYEPDAITLTTL-------IKGLCLKGDIHKALHFHDKVLALGF-------QLNQV 175
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G+ + AL +LR + + D V YN +I G C+ + A++ EM
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI V Y +L+ GL G ++ A L ++ + T
Sbjct: 236 VAKRICP-TVVTYNTLICGLC-------------IMGQLKDAIGLLHKMILENINPTVYT 281
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S+ ++ K+ + +EAK + + M+ K TY++L+ G+
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVMMKKDV--KPNIVTYNSLMN---------------GY 324
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ V++A +TM PD Y+ +I C+ K VD+A ++ M P +
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384
Query: 301 FSVLALI 307
+ +LI
Sbjct: 385 VTYNSLI 391
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKA 113
P++VTYN LI G C +G++++A+G+L M ++P +++I++ FC +++E
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+ + M+ D K + Y+SLMN Y ++ KA + +A G
Sbjct: 302 FVVMMKKDVK-----------------PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL 233
+ + S+ I+G K EA ++ M TY++LI+
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV--VTYNSLID---------- 392
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
G G +S A + M P+ YN L+ C+ +VDKA + T++
Sbjct: 393 -----GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447
Query: 294 YGFVP 298
+ P
Sbjct: 448 HNIQP 452
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 121/312 (38%), Gaps = 75/312 (24%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
+S V +LH QM NG+ + +LVT + LI + LG + + + + G
Sbjct: 82 ANHYSIVVSLHRQMEFNGI-------ASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG 134
Query: 90 LSPDA-----------------------------------VSYNIVISGFCRIREPGKAY 114
PDA VSY +I+G C++ + A
Sbjct: 135 YEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAAL 194
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
E+ +D K ++R++ V+Y +++ G+ + L+ND A+ E+
Sbjct: 195 EMLRRIDGK-LVRLDVVMYNTIIDGVCKD----KLVND---------AFDFYSEMVAKRI 240
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
VT + I GL + ++A +L MI L T Y I
Sbjct: 241 CPTVVTYNTLICGLCIMGQLKDAIGLLHKMI----LENINPTVYTFSI------------ 284
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
LV F G V EA M+ + KP+ YN L+ +C V+KA +++ M
Sbjct: 285 -LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343
Query: 295 GFVP--HMFSVL 304
G P H +S++
Sbjct: 344 GVAPDVHSYSIM 355
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 84/352 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL- 59
M+ R + P E TY+ + I YC K L + M+HNG++PD T P +
Sbjct: 524 MVERKIKPTEVTYNVM-------IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576
Query: 60 ---------------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ Y+AL++GYC GR+ EAL M + G++
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA------- 145
D V + ++I G + ++ + + L +M ++ LR + V+Y S++ S E +
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG-LRPDSVIYTSMIDAYSKEGSFKKSGEC 695
Query: 146 ---------------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
Y++ MN G++++A L ++ SVT F++ L+K
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755
Query: 191 KARTREAK----EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLV 246
+ +EA E+L +++N+ TY+ LI +GF G +
Sbjct: 756 EGNMKEATDLHHEMLKGLLANT-------ATYNILI---------------RGFCKLGRL 793
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
EA + M PD Y+ +I EHCR +V A ++ M+ G P
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y SLIN +C G+ S L+ +MI+ G+ P+ T+ LI GYC +VE+A
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGL-------EPTATTFTTLISGYCKDLQVEKAF 483
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ R M E ++P ++ +I G C E +A +L EM E++I + EV Y +++G
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKI-KPTEVTYNVMIEG 542
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y +M+KA+ L ++ H+G + ++ T I+GL R AK+
Sbjct: 543 -------------YCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKD 589
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ + H L E C + L+ G+ +G ++EA A M+
Sbjct: 590 FIDDL----------HKKNLKLNEMCYS-------ALLHGYCGQGRLTEALSASCEMIQR 632
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
D + LI + +++ + + + +M G P
Sbjct: 633 GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRP 671
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 144/355 (40%), Gaps = 71/355 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
ML L P+ T S++ N + +F V + D+ ++ GV PD T S
Sbjct: 174 MLGNTLLPEVRTLSAILNGLLRI-------RKFILVWEVFDESVNAGVKPDPYTCSAVIR 226
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
S+VTYN LI+G C G V EAL + + + E GL
Sbjct: 227 SLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKE 286
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+Y ++ GFCR+++ L EM E + + E A S L++
Sbjct: 287 DVVTYCTLVLGFCRVQQFDDGICLMNEMVE--------------LGFVPTEAAVSGLVDG 332
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+G+++ AY L ++ G+L + IN L K +A+ + +M S +
Sbjct: 333 LRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNL--P 390
Query: 213 TTHTTYDALIE--------NCSNNEFKSLVE------------LVKGFRMRGLVSEAARA 252
TY LI+ + + + F ++E L+ G G +S A
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ M++ +P + LI +C+ V+KA+ +Y M P +++ ALI
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALI 505
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR--IREPGKAY 114
P+L YNALI C +++A + + M M L + V+Y+I+I FC+ + + ++Y
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+M D R E +Y Y+SL+N + GD+ A L ++ ++G
Sbjct: 416 FGRMIEDGIR-----ETIY-----------PYNSLINGHCKFGDLSAAEFLYTKMINEGL 459
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSL 233
+ T + I+G K + +A ++ M N + T+ ALI CS NE
Sbjct: 460 EPTATTFTTLISGYCKDLQVEKAFKLYREM--NEKEIAPSVYTFTALIYGLCSTNE---- 513
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
++EA++ D M+ KP YN +I +C+ N+DKA+ + M+H
Sbjct: 514 ------------MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561
Query: 294 YGFVPHMFSVLALI 307
G VP ++ LI
Sbjct: 562 NGLVPDTYTYRPLI 575
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 54/321 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL P T+++L I+ YC + K L+ +M + +PS+
Sbjct: 454 MINEGLEPTATTFTTL-------ISGYCKDLQVEKAFKLYREMNEKEI-------APSVY 499
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ ALIYG C + EA + M E + P V+YN++I G+C+ KA+EL +M
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559
Query: 121 DEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGD 158
++ + Y L+ GL +E YS+L++ Y QG
Sbjct: 560 LHNGLVP-DTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGR 618
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ +A E+ G + V +V I+G K+ + +L M + Y
Sbjct: 619 LTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL--RPDSVIY 676
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
++I+ + G ++ D M+ P+ Y + C+
Sbjct: 677 TSMID---------------AYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721
Query: 279 KNVDKAYNMYTRMVHYGFVPH 299
+D+A +++ +M+ P+
Sbjct: 722 GEIDRAGHLFEKMLTANISPN 742
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +SP+ TY ++ G + ++LH +M+ G+L +
Sbjct: 734 MLTANISPNSVTYGCFLDSLTK-------EGNMKEATDLHHEML-KGLLAN-------TA 778
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C LGR+ EA +L M E G+ PD ++Y+ +I CR + G A EL M
Sbjct: 779 TYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTM 838
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSS---LMNDYLAQG 157
K + + V + L+ G A L ND L++G
Sbjct: 839 LRKGV-EPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRG 877
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C S+L +MI + PD +VTY LIYG +GR++EA+
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPD-------VVTYTTLIYGCLIVGRLKEAV 259
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M + PD ++NI++ G C+ E KA V+ + QG
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKA---------------RNVLAVMIKQG 304
Query: 140 L-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ S+ Y+SLM+ Y KA + +A G + + S+ INGL K EA
Sbjct: 305 VDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M S S T TY++LI+ G G +S+A + M +
Sbjct: 365 NLFKEMHSKSMAPNT--VTYNSLID---------------GLLKYGRISDAWDLVNEMHN 407
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D Y+ L+ C+ VDKA + T++ G P++++ L+
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD T ++L I CL G+ + + HD +I G D V+Y
Sbjct: 129 GFHPDTVTITTL-------IKGLCLNGKVREALHFHDDVIAKGFHLD-------QVSYGT 174
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G C G AL +LR + + + P+ V YN +I C+ + A +L EM KR
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I D Y++L+ L G +++A L ++ + T ++
Sbjct: 235 I--------------FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNIL 280
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
++GL K+ ++A+ +L MI S TY++L++ G+ +
Sbjct: 281 VDGLCKEGEMKKARNVLAVMIKQGVDSNI--VTYNSLMD---------------GYFLVK 323
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
++A +TM PD Y+ +I C+ K VD+A N++ M P+ +
Sbjct: 324 QENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYN 383
Query: 305 ALI 307
+LI
Sbjct: 384 SLI 386
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 77/316 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + + PD T++ L ++ C GE K N+ MI GV ++V
Sbjct: 265 MLLKNIKPDVYTFNIL-------VDGLCKEGEMKKARNVLAVMIKQGV-------DSNIV 310
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GY + + +A + M G++PD SY+I+I+G C+ + +A L EM
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEM 370
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K + V Y SL+ GL +D YSSL++
Sbjct: 371 HSKS-MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429
Query: 159 MEKAYILDREIAHDGYLSESVTES-----------------------------------V 183
++KA L +I G T + V
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Query: 184 FINGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+NGL K+ EA ++ M N C+ + T T AL EN N++ V+L++
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDK---AVKLLREMI 546
Query: 242 MRGLVSEAARAHDTML 257
++G + + ++ML
Sbjct: 547 VQGSAVGSNISSNSML 562
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGK 112
P L T+N LI +C LG + A +L + ++G PD V+ +I G C ++RE
Sbjct: 96 QPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALH 155
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
++ + + +G D+ +Y +L+N G+ A + R+I
Sbjct: 156 FHD------------------DVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKI-- 195
Query: 172 DGYLSES--VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE 229
DG L + V + I+ L K A ++ MI TY LI C
Sbjct: 196 DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDV--VTYTTLIYGC---- 249
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
+ G + EA + ML N KPD +N L+ C+ + KA N+
Sbjct: 250 -----------LIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLA 298
Query: 290 RMVHYG 295
M+ G
Sbjct: 299 VMIKQG 304
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 47/297 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++A+C G + N+ M+ G+ +P+ VTY++L+ GYC + V A GI
Sbjct: 118 LVDAFCKEGNVKEAKNVLAMMMKQGI-------NPNAVTYSSLMDGYCLVNEVNNAKGIF 170
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL-- 140
M G++ + SYNI+I+GFC+I+ +A L EM ++++ + V Y SL+ GL
Sbjct: 171 STMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIP-DVVTYNSLINGLCK 229
Query: 141 --------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D YSSL++ ++KA L + G T
Sbjct: 230 SGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYT 289
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I+GL K R +A H ++ L+ N + ++ GF
Sbjct: 290 YTILIDGLCKGGRLEDA-----------------HNIFEDLLVKGYNITVNTYTVMIHGF 332
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+GL EA M + P+ Y +I DKA N+ M+ G +
Sbjct: 333 CNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGLL 389
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ +M + PD + TYNALI G+C +G++++A
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEMASKRIFPD-------VFTYNALISGFCIVGKLKDAT 97
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M ++P ++NI++ FC+ E + + V+ + QG
Sbjct: 98 DLFNKMTSKNINPTVYTFNILVDAFCK---------------EGNVKEAKNVLAMMMKQG 142
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
++ + YSSLM+ Y ++ A + ++ G + + ++ ING K T EA
Sbjct: 143 INPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAM 202
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M + TY++LI G G +S A + D M
Sbjct: 203 NLFEEMHCRKLIPDV--VTYNSLIN---------------GLCKSGKISYALKLVDEMHD 245
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD Y+ L+ C+ VDKA + T + G P+M++ LI
Sbjct: 246 RGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILI 294
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 33/249 (13%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V Y LI G C +G + AL +LR + + PD V YN +I G C+ + A++L E
Sbjct: 8 VGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M KRI D Y++L++ + G ++ A L ++
Sbjct: 68 MASKRI--------------FPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVY 113
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T ++ ++ K+ +EAK +L M+ TY +L++ C NE + +
Sbjct: 114 TFNILVDAFCKEGNVKEAKNVLAMMMKQGI--NPNAVTYSSLMDGYCLVNEVNNAKGIFS 171
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+RG+ + YN +I C+ K D+A N++ M +P
Sbjct: 172 TMSLRGVTANVWS----------------YNIMINGFCKIKMTDEAMNLFEEMHCRKLIP 215
Query: 299 HMFSVLALI 307
+ + +LI
Sbjct: 216 DVVTYNSLI 224
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAY------------FS----------------LINAYCLGGE 32
M+ +G++P+ TYSSL + Y FS +IN +C
Sbjct: 138 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 197
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ NL ++M ++PD +VTYN+LI G C G++ AL ++ M + G P
Sbjct: 198 TDEAMNLFEEMHCRKLIPD-------VVTYNSLINGLCKSGKISYALKLVDEMHDRGQPP 250
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D ++Y+ ++ C+ + KA L + ++ I R Y L+ GL
Sbjct: 251 DIITYSSLLDALCKNHQVDKAIALLTNLKDQGI-RPNMYTYTILIDGLC----------- 298
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G +E A+ + ++ GY T +V I+G K EA +L M NSC
Sbjct: 299 --KGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 356
Query: 213 TTHTTYDALIENCSNNEFKSLVE-LVKGFRMRGLV 246
TY+ +I + +N+ E L++ RGL+
Sbjct: 357 A--LTYEIIIRSLFDNDENDKAENLLREMITRGLL 389
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 47/294 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++ +N L++G+C +G V A + + GL P VS+N +ISG+CR + + + L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYL 154
K M+ +RI + Y +L+ GL E +++L++
Sbjct: 284 KSVMESERI-SPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 155 AQGDMEKAYILDREIAHD-GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
G ++ A + + EI D G + +T + INGL + +EA+++L MI N K
Sbjct: 343 KHGKIDLA-LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG--FKP 399
Query: 214 THTTYDALIENCSNN-------EFK-------------SLVELVKGFRMRGLVSEAARAH 253
T+ L++ C + E K + L+ G G V +A R
Sbjct: 400 DKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERML 459
Query: 254 DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
ML HKPD Y +I C+ +V + M G VP + + AL+
Sbjct: 460 KDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 49/223 (21%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL---- 59
RG+ PD TY++L IN C G+ + L ++MI NG PD +T + +
Sbjct: 360 RGIRPDLITYNAL-------INGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCC 412
Query: 60 ------------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
V + ALI G C GRV +A +L+ M G PD
Sbjct: 413 KDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDP 472
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
+Y +VI FC+ + +L EM +R R+ VV Y++LMN +
Sbjct: 473 TYTMVIDCFCKKGDVKMGAKLLKEM--QRDGRVPGVV------------TYNALMNGFCK 518
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
QG M+ A +L + + + +T ++ ++G K + + K
Sbjct: 519 QGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFK 561
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 87 EMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE--KRILRMEEVVYESLMQGLSDED 144
+ G P+ +NI++ GFC+I G +M DE +R LR V + +L+ G
Sbjct: 219 DYGYPPNVYLFNILMHGFCKI---GDVMNARMVFDEISRRGLRPSVVSFNTLISG----- 270
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
Y ++E+ ++L + + + T S INGL K++R EA +
Sbjct: 271 --------YCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL---- 318
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
+D + E + L+ G G + A R + M +PD
Sbjct: 319 -------------FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPD 365
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
YN LI CR ++ +A + M+ GF P + L+
Sbjct: 366 LITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLM 408
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 37/222 (16%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
++PD T FN + I+ +CL G + N+ M+ G+ P++VTY+AL
Sbjct: 72 VNPDVCT----FNIF---IDEFCLQGNMKEAKNILGVMMIQGM-------KPNVVTYSAL 117
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ GYC L V +A M +G++ D +YNIVI+GFC+ + +A +L EM K I
Sbjct: 118 MDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNI 177
Query: 126 LRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKAY 163
+ V Y +++ GL +DE Y+S ++ + ++KA
Sbjct: 178 IP-TIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAI 236
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
L +EI + G + T S+ I+GLSK R ++A++I ++
Sbjct: 237 ALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLL 278
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSL----------------------------INAYCLGGE 32
M+ +G+ P+ TYS+L + Y L IN +C
Sbjct: 102 MMIQGMKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKM 161
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ +L ++M ++ P++VTYN +I G C GR+ A ++R M +MG
Sbjct: 162 MDEALDLFEEMYSKNII-------PTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPA 214
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D ++YN + FC+ + KA L E+ QG+ + S++ D
Sbjct: 215 DEITYNSFLHTFCKNHQLDKAIALVKEIHN---------------QGIQVDLYTCSMLID 259
Query: 153 YLAQGD-MEKAYILDREIAHDGYLSESVTESVFINGL 188
L++G ++ A + +++ GY + VT I+GL
Sbjct: 260 GLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMISGL 296
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 96/268 (35%), Gaps = 34/268 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P +VT N LI YC L ++ A + + +MG P+ ++ ++ C + KA
Sbjct: 8 PDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKALHF 67
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDED-----------------AYSSLMNDYLAQGDM 159
+ + + E +QG E YS+LM+ Y +
Sbjct: 68 HENIVNPDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGV 127
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
KA + G + ++ ING K EA ++ M S + + T TY+
Sbjct: 128 NKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIP--TIVTYN 185
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
+I+ G G +S A + M D YN + C+
Sbjct: 186 TVID---------------GLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNH 230
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+DKA + + + G +++ LI
Sbjct: 231 QLDKAIALVKEIHNQGIQVDLYTCSMLI 258
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 71/351 (20%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
G PD TY+ L + A+C G+ ++ ++M+ NG+ P+ T +
Sbjct: 290 GCFPDVPTYTVL-------VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCK 342
Query: 57 --------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
S+V +NALI GYC G +E+A+ +L M + P++ +
Sbjct: 343 VGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRT 402
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
YN +I GFCR + +A L +M E + L V Y +L+ GL S
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENK-LSPNLVTYNTLIHGLCKARVVDS-------- 453
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
A+ L + DG++ + T FI+ L K + +A ++ S+ ++
Sbjct: 454 -----AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH--AEANEF 506
Query: 217 TYDALIEN-CSNNEF--------KSLVE-----------LVKGFRMRGLVSEAARAHDTM 256
Y ALI+ C +F + L E L+ G R G V +A D M
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ KP Y LI E R + D+A +M+ G P++ + A I
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFI 617
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y SLI YC E + + M G L + V+Y LI+G+C +G+++EA
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN-------EVSYTNLIHGFCEVGKIDEA 279
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + M E G PD +Y ++++ FC + + +A + EM E I E VY
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI---EPNVY----- 331
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
Y+ L++ + G M++ + + G +S V + I+G K+ +A
Sbjct: 332 ------TYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAI 385
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+L SM N C N+ ++ EL+ GF + + A + M
Sbjct: 386 CVLDSMKLNKV---------------CPNS--RTYNELICGFCRKKSMDRAMALLNKMYE 428
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN LI C+ + VD A+ ++ M+ GFVP + A I
Sbjct: 429 NKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
+N F +++ + G +++ L M+++GV P+L+++N ++ +C +G V
Sbjct: 158 YNRLFMVLSRF---GLIDELNCLFKDMLNDGV-------EPNLISFNTMVNAHCKIGNVV 207
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
A G+ + G D+ +Y +I G+C+I E G AY++ M ++ LR EV Y +L
Sbjct: 208 VAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLR-NEVSYTNL 266
Query: 137 MQGLS----------------------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ G D Y+ L+ + G +A E+ +G
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
T +V I+ K + E E+L +M+ +S ++ALI+
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSV--VPFNALID----------- 373
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
G+ RG++ +A D+M P+ YN LI CR K++D+A + +M
Sbjct: 374 ----GYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN 429
Query: 295 GFVPHMFSVLALI 307
P++ + LI
Sbjct: 430 KLSPNLVTYNTLI 442
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI +C + L ++M N + SP+LVTYN LI+G C V+ A
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKL-------SPNLVTYNTLIHGLCKARVVDSA 454
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M + G PD ++ I C++ + +A+++ + EK
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK--------------H 500
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
++E Y++L++ Y A++L + + +G S+T +V ++GL K+ + +A
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAM 560
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH---DT 255
++ M +K T TY LIE E+++ S+ RA+ D
Sbjct: 561 SLVDVMGKFD--AKPTVHTYTILIE-----------EILRE-------SDFDRANMFLDQ 600
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M+ +P+ Y I +CR + +A M ++ G +
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
+F ++ L ++M+ G +P+ + TY+ LI G C + + A + M E G+
Sbjct: 720 ADFEIITMLFEKMVEQGCVPN-------VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGI 772
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ--GLSDEDAYSS 148
SP +N ++S C+ L M + R+L +S+M+ L+ ++Y
Sbjct: 773 SPSENIHNSLLSSCCK---------LGMHEEALRLL-------DSMMEYNHLAHLESYKL 816
Query: 149 LMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
L+ QG+ EKA + R + GY + V V ++GL +K E ++ M
Sbjct: 817 LVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876
Query: 209 C-LSKTTHT 216
C L THT
Sbjct: 877 CRLHSDTHT 885
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 127/318 (39%), Gaps = 37/318 (11%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI+ YC +FS L +M+ G P+ +T+N L+ G G+VE+A+
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN-------SITFNVLLDGLRKEGKVEDAM 560
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM------------------- 120
++ M + P +Y I+I R + +A +M
Sbjct: 561 SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620
Query: 121 -DEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ R+L EE+V + +G L D Y L+N Y G ++ A+ + + G
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR 680
Query: 179 VTESVFINGLSKKARTREAKEILLSM----ISNSCLSKTTH-----TTYDALIENCSNNE 229
T S+ + L + +E + L+ + N+ + K ++ ++E
Sbjct: 681 QTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPN 740
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
+ +L+KG +S A R + M P ++N L+ C+ ++A +
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800
Query: 290 RMVHYGFVPHMFSVLALI 307
M+ Y + H+ S L+
Sbjct: 801 SMMEYNHLAHLESYKLLV 818
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 36/291 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
+ Y LI +F + + DQMI +G P++VTY A I YC GR+ E
Sbjct: 576 HTYTILIEEILRESDFDRANMFLDQMISSGC-------QPNVVTYTAFIKAYCRQGRLLE 628
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM--------DEKRILRME 129
A ++ + E G+ D+ Y+++++ + I + A+ + + M + + ++
Sbjct: 629 AEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLK 688
Query: 130 EVVYESLMQ---GLSDEDAYSSLMNDYLAQ-GDMEKAYILDREIAHDGYLSESVTESVFI 185
+++E + GL S+ N + + D E +L ++ G + T S I
Sbjct: 689 HLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLI 748
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
GL K A L + + S +S + EN N+ S +L G+
Sbjct: 749 KGLCKVEHLSLAFR-LFNHMKESGISPS---------ENIHNSLLSSCCKL-------GM 791
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
EA R D+M+ NH Y L+ N +KA ++ ++ G+
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGY 842
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+LIN CL GE K + +D +I +F S Y LI G C G + AL +
Sbjct: 137 TLINGLCLNGEVKKAFHFYDDVIAK----EFQLNQFS---YGILINGLCKSGETKAALSL 189
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + + + PD V Y +I C+ + AYEL EM EK+I VV
Sbjct: 190 LRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIF--PNVV--------- 238
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
YS+L+ + G ++ A L E+ + T ++ I+GL K R+A+ +L
Sbjct: 239 ---TYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLL 295
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
MI + K TY +L++ G+ V++A + M+
Sbjct: 296 GLMIKSGV--KLNVVTYSSLMD---------------GYFQVNEVNKAKDVFEIMVRWGV 338
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN +I C K VD+A N++ +M VP+ + +LI
Sbjct: 339 SPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLI 384
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C + L+ +M+ + P+ +VTY+ LIYG+C +G++++A+
Sbjct: 205 YTTIIDSLCKDKLVTDAYELYSEMVEKKIFPN-------VVTYSTLIYGFCIVGQLKDAV 257
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M + PD ++NI+I G C+ E KA L + + K +++ V Y SLM G
Sbjct: 258 RLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNL-LGLMIKSGVKLNVVTYSSLMDG 316
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y ++ KA + + G + ++ I+GL EA
Sbjct: 317 -------------YFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVN 363
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ M + + T TY++LI G G +S D M
Sbjct: 364 LFKKMHLRNMVPNT--VTYNSLIY---------------GLCKSGRISYVLDLIDEMCDR 406
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ Y L+ C+ N+DKA ++T+M G P++++ LI
Sbjct: 407 GQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILI 454
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 131/339 (38%), Gaps = 59/339 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ + TYSSL + YF + E +K ++ + M+ GV SP++
Sbjct: 298 MIKSGVKLNVVTYSSLMDGYFQV-------NEVNKAKDVFEIMVRWGV-------SPNIH 343
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G C V+EA+ + + M + P+ V+YN +I G C+ +L EM
Sbjct: 344 SYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEM 403
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
+ R + Y SLM L Y+ L++ G
Sbjct: 404 CD-RGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGR 462
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ A+ L E+ G + VT + I+GL K +A E + I++ + H TY
Sbjct: 463 IADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIE-FFTKINDWGIQADVH-TY 520
Query: 219 DALIEN-CSNNEFKSLVE-----LVKGFRM--------------RGLVSEAARAHDTMLH 258
LI+ C K+ +E L+KG+ + GL E M
Sbjct: 521 TVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEE 580
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
PD Y +I +D A + M+ G +
Sbjct: 581 NGCAPDAITYEIIICALFGKGKIDMAEKLLCEMIARGLL 619
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P++VT LI +C L ++ A IL + ++G P+ V+ +I+G C E KA+
Sbjct: 94 QPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFH 153
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
++ K ++ + Y L+ GL G+ + A L R I
Sbjct: 154 FYDDVIAKE-FQLNQFSYGILINGLC-------------KSGETKAALSLLRMIEGLSVK 199
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+ V + I+ L K +A E+ M+ TY LI
Sbjct: 200 PDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNV--VTYSTLIY------------ 245
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
GF + G + +A R + M+ N PD +N LI C+ + KA N+ M+ G
Sbjct: 246 ---GFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSG 302
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 51/320 (15%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
G + K ++M G+ PD +V+YN LI GYC + R+++AL ++ MP G
Sbjct: 280 GNKLEKALRFLERMKVAGIEPD-------IVSYNCLIKGYCDVHRIDDALELIAEMPFKG 332
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-------- 141
PD VSY V++ C+ R+ + L M + L ++V Y +L+ LS
Sbjct: 333 CPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDA 392
Query: 142 --------------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
D+ YS++++ + +++KA L ++ G + VT + I+G
Sbjct: 393 LVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK-------- 238
+ + EAK++L M + C K TY L+ C N + E++
Sbjct: 453 FCRVGKIDEAKKMLQQMYKHGC--KPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWT 510
Query: 239 -----------GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
G R G +SEA M+ P+ N LI CR +NV A
Sbjct: 511 PNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+H G ++ + ++I
Sbjct: 571 LEECLHKGCAVNVVNFTSVI 590
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 38/289 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y ++++++C K +L M G PD +VTY A+I G+C +G+++EA
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD-------VVTYTAIIDGFCRVGKIDEA 462
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+L+ M + G P+ V+Y ++++G C + +A E+ + + E+ + Y ++M
Sbjct: 463 KKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREM-INVSEEHWWTPNAITYSAVMH 521
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
GL E G + +A L RE+ G+L V ++ I L + AK
Sbjct: 522 GLRRE-------------GKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAK 568
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ L + C + T ++ GF G + A + M
Sbjct: 569 KYLEECLHKGCAVNVVNFT-----------------SVIYGFCQIGDLDAALSMLEDMYL 611
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N PD Y L + +D+A + +M+ G P + A+I
Sbjct: 612 SNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 63/343 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G +PD TY+++ I+ +C G+ + + QM +G P+ V
Sbjct: 434 MYSKGCNPDVVTYTAI-------IDGFCRVGKIDEAKKMLQQMYKHGC-------KPNTV 479
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY L+ G C G+ EA ++ E +P+A++Y+ V+ G R + +A +L EM
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 121 DEKRIL--------------RMEEVV------YESLMQGLS-DEDAYSSLMNDYLAQGDM 159
EK L R + VV E L +G + + ++S++ + GD+
Sbjct: 540 IEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDL 599
Query: 160 EKAYILDREIAHDGYLS----ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
+ A + D YLS +++T + + L KK+R EA E+++ M+ T
Sbjct: 600 DAAL----SMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI--DPTP 653
Query: 216 TTYDALIEN-CSNNEFKSLVELVKGFRMR-----------------GLVSEAARAHDTML 257
TY A+I C +++L++ R G EA + +L
Sbjct: 654 VTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVL 713
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
K D + LI + N AY + +M +P +
Sbjct: 714 RTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDL 756
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 108/273 (39%), Gaps = 39/273 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P L N IY ++E+AL L M G+ PD VSYN +I G+C + A EL
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALEL 324
Query: 117 KMEMDEK-----------------RILRMEEV--VYESLMQG---LSDEDAYSSLMNDYL 154
EM K + ++EEV + E+++Q + D+ Y++L+
Sbjct: 325 IAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALS 384
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G + A + RE G+ + V S ++ K +AK +++ M S C
Sbjct: 385 KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDV- 443
Query: 215 HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
TY A+I+ GF G + EA + M KP+ Y L+
Sbjct: 444 -VTYTAIID---------------GFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNG 487
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C +A M + + P+ + A++
Sbjct: 488 LCHNGKSLEAREMINVSEEHWWTPNAITYSAVM 520
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 68/336 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M +G+ PD TY+++ + C G+ + L D+M ++PD VT
Sbjct: 307 MTGKGMLPDVWTYNTM-------VRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLID 359
Query: 55 ------GSPSL----------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
GS + VT+N +I +C G+++EA ++ M E G SP
Sbjct: 360 GCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMN 151
D +YN +I+G+C+ + +AY++ EM K GL D ++L++
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRK---------------GLKLDTFTLNTLLH 464
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
+ ++ AY L + GY+ + VT I G K + A ++ M ++
Sbjct: 465 TMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T TY+ +I +G + G +A + +L PD N +
Sbjct: 525 --TIITYNTII---------------RGLCLSGKTDQAVDKLNELLEKGLVPDESTSNII 567
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
I +C V+KA+ + +MV + P +F+ L+
Sbjct: 568 IHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILL 603
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+I +C G+ + SN+ +M+ +G SP TYN +I GYC G++ EA ++
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGF-------SPDCFTYNTMINGYCKAGKMAEAYKMM 444
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M GL D + N ++ C ++ AY L M+ KR ++EV Y +L+ G
Sbjct: 445 DEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA-RKRGYILDEVTYGTLIMG--- 500
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y ++A L E+ G ++ +T + I GL +T +A + L
Sbjct: 501 ----------YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKL- 549
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
N L K L+ + S + ++ G+ G V +A + H+ M+ + K
Sbjct: 550 ----NELLEK-------GLVPDESTSNI-----IIHGYCWEGAVEKAFQFHNKMVEHSLK 593
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
PD N L+ CR ++K ++ + G
Sbjct: 594 PDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P++ T+N LI+GYC EEAL ++ M E G PD V+YN V++ C+ + + +
Sbjct: 208 QPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRD 267
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L ++M + + + Y+ L++ Y +++A + + G L
Sbjct: 268 LLLQMKNSGL--------------FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGML 313
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC-----SNNEF 230
+ T + + GL + + EA + M S + TY+ LI+ C S+ F
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDV--VTYNTLIDGCFEHRGSDAAF 371
Query: 231 KSLVE---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
K + E ++K F G + EA+ M+ PD YN +I +
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGY 431
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ + +AY M M G F++ L+
Sbjct: 432 CKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLL 463
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +GL PDE T + + I+ YC G K H++M+ + + PD +
Sbjct: 552 LLEKGLVPDESTSNII-------IHGYCWEGAVEKAFQFHNKMVEHSLKPD-------IF 597
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N L+ G C G +E+ L + G D V+YNI+IS FC+ R A++L EM
Sbjct: 598 TCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM 657
Query: 121 DEKRILRMEEVVYESLMQGLS 141
+ K L + Y +++ GL+
Sbjct: 658 EGKN-LEPDRYTYNAIVTGLT 677
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 47/274 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG DE TY +L YF + + L ++M G++ +++TYN
Sbjct: 485 RGYILDEVTYGTLIMGYFK-------DEQADRALKLWEEMKETGIVA-------TIITYN 530
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G C G+ ++A+ L + E GL PD + NI+I G+C KA++ +M E
Sbjct: 531 TIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEH 590
Query: 124 RILRMEEVVYESLMQGLSDEDAYS---SLMNDYLAQGD-------------------MEK 161
L+ + L++GL E +L N ++++G +E
Sbjct: 591 S-LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLED 649
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT---- 217
A+ L E+ + T + + GL+K RT EA+++ L KT T+
Sbjct: 650 AFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELG 709
Query: 218 -----YDALIEN-CSNNEFKSLVELVKGFRMRGL 245
Y I + C+ ++K ++L + +G+
Sbjct: 710 TSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 55/306 (17%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
N + LI+ YC + L +QM G PD VTYN ++ C ++ +
Sbjct: 212 NTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDN-------VTYNTVLTALCKRSQLTQ 264
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
+L M GL P+ +YNI++ G+C+++ +A E+ M K +L + Y +++
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP-DVWTYNTMV 323
Query: 138 QGLSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+GL DE Y++L++ + A+ L E+ G
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMI----SNSCLSKTTHTTYDALIENCSNNEFK 231
VT ++ I + + EA +++ M+ S C TY+ +I
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCF------TYNTMIN-------- 429
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G+ G ++EA + D M K D N L+ C K +D AY + +
Sbjct: 430 -------GYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482
Query: 292 VHYGFV 297
G++
Sbjct: 483 RKRGYI 488
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 127/307 (41%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G SPD TY+++ IN YC G+ ++ + D+M G+ D
Sbjct: 412 MVESGFSPDCFTYNTM-------INGYCKAGKMAEAYKMMDEMGRKGLKLD-------TF 457
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N L++ C ++++A + + G D V+Y +I G+ + + +A +L EM
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E I+ + Y ++++GL G ++A E+ G + + T
Sbjct: 518 KETGIV-ATIITYNTIIRGLC-------------LSGKTDQAVDKLNELLEKGLVPDEST 563
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I+G + +A + ++ ++E+ + + L++G
Sbjct: 564 SNIIIHGYCWEGAVEKAFQF-----------------HNKMVEHSLKPDIFTCNILLRGL 606
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G++ + +T + D YN +I C+ + ++ A+++ T M P
Sbjct: 607 CREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDR 666
Query: 301 FSVLALI 307
++ A++
Sbjct: 667 YTYNAIV 673
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 75/327 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------- 54
G+ PD TY+SL I +C G++ +V L +M++ + P+ T
Sbjct: 227 GIDPDILTYTSL-------IRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 279
Query: 55 ------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P +VT+N LI G+C G V EA + + E G+ PD S
Sbjct: 280 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 339
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE-------DAYSSL 149
Y I+I G+C+ + +A L EM K ++ ++ V+Y SL+ GL + +S++
Sbjct: 340 YTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKSGRISYAWELFSTI 398
Query: 150 MND---------------YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
ND + D++ L + + G +T ++ ING K R
Sbjct: 399 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 458
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
REA LLS++ + L+ + TY++L + G G +S+A
Sbjct: 459 REAMN-LLSVMQSKNLAPDS-ITYNSLFD---------------GLCKSGRISDAWELFK 501
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNV 281
M G D YN L+ C+ ++V
Sbjct: 502 VMHVGGPPVDVATYNVLLDAFCKAQDV 528
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L RG P+ T +++ + C+ GE K + HD + G+L D V
Sbjct: 118 VLKRGYQPNNITLTTV-------MKGLCINGEVQKAMDFHDNVAAQGMLLD-------EV 163
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C +GR +A +L+ M + P+ V YN++I FC+ KA +L +++
Sbjct: 164 CYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKI 223
Query: 121 DEKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ I D D Y+SL+ + G + L E+ +
Sbjct: 224 VDMGI----------------DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 267
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T +V I+ +K + EA+ + ++ +++ + + L+
Sbjct: 268 YTFNVLIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLIS 310
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + G V EA + DT+ PD Y LI+ +C+CK +D+A +++ M
Sbjct: 311 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 363
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+++G++P T S IN YC GE ++ ++ G P+ +
Sbjct: 83 MVFKGVTPSIFTLSIW-------INCYCHLGEMGFAFSVLGIVLKRGY-------QPNNI 128
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T ++ G C G V++A+ + G+ D V Y +I+G C+I A++L EM
Sbjct: 129 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 188
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E ++++ V+Y ++ ++ + YL DM G + +T
Sbjct: 189 -EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM-------------GIDPDILT 234
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G + + E K+++ M+ N ++ +T ++ LI+ F
Sbjct: 235 YTSLIRGFCRTGQWGEVKQLMCEMV-NKNINPNVYT-FNVLID---------------AF 277
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+G + EA + M+ +PD +N LI HC NV +A ++ + G +P +
Sbjct: 278 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 301 FSVLALI 307
+S LI
Sbjct: 338 WSYTILI 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL+P TY+ LIN YC + NL M + PD +
Sbjct: 433 MCGKGLTPTVLTYN-------ILINGYCKSKRIREAMNLLSVMQSKNLAPDS-------I 478
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
TYN+L G C GR+ +A + + M G D +YN+++ FC+ ++
Sbjct: 479 TYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 527
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 75/327 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------- 54
G+ PD TY+SL I +C G++ +V L +M++ + P+ T
Sbjct: 227 GIDPDILTYTSL-------IRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 279
Query: 55 ------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P +VT+N LI G+C G V EA + + E G+ PD S
Sbjct: 280 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 339
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE-------DAYSSL 149
Y I+I G+C+ + +A L EM K ++ ++ V+Y SL+ GL + +S++
Sbjct: 340 YTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKSGRISYAWELFSTI 398
Query: 150 MND---------------YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
ND + D++ L + + G +T ++ ING K R
Sbjct: 399 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 458
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
REA LLS++ + L+ + TY++L + G G +S+A
Sbjct: 459 REAMN-LLSVMQSKNLAPDS-ITYNSLFD---------------GLCKSGRISDAWELFK 501
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNV 281
M G D YN L+ C+ ++V
Sbjct: 502 VMHVGGPPVDVATYNVLLDAFCKAQDV 528
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L RG P+ T +++ + C+ GE K + HD + G+L D V
Sbjct: 118 VLKRGYQPNNITLTTV-------MKGLCINGEVQKAMDFHDNVAAQGMLLD-------EV 163
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C +GR +A +L+ M + P+ V YN++I FC+ KA +L +++
Sbjct: 164 CYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKI 223
Query: 121 DEKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ I D D Y+SL+ + G + L E+ +
Sbjct: 224 VDMGI----------------DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 267
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T +V I+ +K + EA+ + ++ +++ + + L+
Sbjct: 268 YTFNVLIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLIS 310
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + G V EA + DT+ PD Y LI+ +C+CK +D+A +++ M
Sbjct: 311 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 363
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+++G++P T S IN YC GE ++ ++ G P+ +
Sbjct: 83 MVFKGVTPSIFTLSIW-------INCYCHLGEMGFAFSVLGIVLKRGY-------QPNNI 128
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T ++ G C G V++A+ + G+ D V Y +I+G C+I A++L EM
Sbjct: 129 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 188
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E ++++ V+Y ++ ++ + YL DM G + +T
Sbjct: 189 -EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM-------------GIDPDILT 234
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G + + E K+++ M+ N ++ +T ++ LI+ F
Sbjct: 235 YTSLIRGFCRTGQWGEVKQLMCEMV-NKNINPNVYT-FNVLID---------------AF 277
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+G + EA + M+ +PD +N LI HC NV +A ++ + G +P +
Sbjct: 278 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 301 FSVLALI 307
+S LI
Sbjct: 338 WSYTILI 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL+P TY+ LIN YC + NL M + PD +
Sbjct: 433 MCGKGLTPTVLTYN-------ILINGYCKSKRIREAMNLLSVMQSKNLAPDS-------I 478
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
TYN+L G C GR+ +A + + M G D +YN+++ FC+ ++
Sbjct: 479 TYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 527
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I + C +L+ QM+ + SP ++TYN L+YG +GR++EA+
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRI-------SPDVITYNTLMYGCLIVGRLKEAV 174
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M + PD ++NI++ G C+ E KA + M ++ +
Sbjct: 175 GLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSV-------------- 220
Query: 140 LSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D D Y+SLM+ Y KA + +A G + + SV INGL K EA
Sbjct: 221 --DPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEA 278
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+L M S S T TY +LI+ G G + +A + M
Sbjct: 279 VNLLKEMHSKSMAPNT--VTYSSLID---------------GLHKSGRIFDAWDLVNEMH 321
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ D YN L+ C+ VDKA + T++ G P +++ L+
Sbjct: 322 NRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILV 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + + PD T++ L ++ C GE K N+ MI V PD ++
Sbjct: 180 MLLKNIKPDIYTFNIL-------VDGLCKEGEMKKARNVLAVMIKQSVDPD-------VI 225
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GY + + +A + M G++PD SY+++I+G C+ + +A L EM
Sbjct: 226 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEM 285
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K + V Y SL+ GL +D Y+SL++
Sbjct: 286 HSKS-MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQ 344
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
++KA L +I G + T ++ ++GL K R ++A+E+
Sbjct: 345 VDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEV 386
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ D + L N + L CL + + + HD +I G + V
Sbjct: 34 MELRGIQTDLVNLNILVNCFCHL-GQVCLNDKVKETLHFHDDVIAKGF-------QLNQV 85
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C G A+ +LR + + + P+ V Y+ +I C+ + A++L +M
Sbjct: 86 SYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D Y++LM L G +++A L ++ + T
Sbjct: 146 LLKRI--------------SPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYT 191
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++GL K+ ++A+ +L MI S TY++L++ G+
Sbjct: 192 FNILVDGLCKEGEMKKARNVLAVMIKQSVDPDV--ITYNSLMD---------------GY 234
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ ++A +TM PD Y+ +I C+ K VD+A N+ M P+
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNT 294
Query: 301 FSVLALI 307
+ +LI
Sbjct: 295 VTYSSLI 301
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 41/300 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++PD T++ L ++A+C G + N+ M+ GV+PD +V
Sbjct: 151 MVLKNINPDVYTFNIL-------VDAFCKEGNTKEAKNVIAMMMKEGVIPD-------VV 196
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +L+ GYC + +V +A +L + MGL+P+A SYNI+I+GFC+I+ +A L EM
Sbjct: 197 TYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEM 256
Query: 121 DEKRIL--RMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+ I +M + +G ++ Y+S ++ ++KA ++I G
Sbjct: 257 CCRGIAPDKMHD-------RGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPY 309
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
T ++ I+GL K+ R A+ I ++ K T TY+ +I
Sbjct: 310 INTYNILIDGLCKEVRLENAQVIFQDLLIKG--YKVTVWTYNIMIN-------------- 353
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G + GL +A + M PD Y +I + D+A + M+ G +
Sbjct: 354 -GLCLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFKNDENDRAEKLLREMIARGLL 412
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 40/265 (15%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P ++T+N LI G C G+V+EAL + +G D VSY +I+G C++ + +A +
Sbjct: 17 QPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTTEALQ 76
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDY 153
+ ++D K ++ + V+Y +++ L D +S+L+ +
Sbjct: 77 VLRKIDGK-LVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALIYGF 135
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
G +++A+ L E+ + T ++ ++ K+ T+EAK ++ M+ +
Sbjct: 136 CIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDV 195
Query: 214 THTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
TY +L++ G+ + V++A + P+ YN +I
Sbjct: 196 --VTYGSLMD---------------GYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIIN 238
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVP 298
C+ K VD+A N++ M G P
Sbjct: 239 GFCKIKMVDEALNLFNEMCCRGIAP 263
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T+++L I C+ G+ + + HD +I G D V
Sbjct: 11 ILKVGFQPDIITFNTL-------IKGLCVNGKVKEALHFHDHVISLGFHLD-------QV 56
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G+ EAL +LR + ++ D V Y+ +I C+ + +AY L EM
Sbjct: 57 SYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEM 116
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D +S+L+ + G +++A+ L E+ + T
Sbjct: 117 ITKRIS--------------PDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYT 162
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK------SL 233
++ ++ K+ T+EAK ++ M+ + TY +L++ C N+ SL
Sbjct: 163 FNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVV--TYGSLMDGYCLVNKVNKAKHVLSL 220
Query: 234 VE-------------LVKGFRMRGLVSEAARAHDTMLHGNHKPD--------GGVYNFLI 272
+ ++ GF +V EA + M PD V +
Sbjct: 221 ISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNS 280
Query: 273 VEHCRCKN--VDKAYNMYTRMVHYGFVPHM 300
H CKN VDKA ++ +G P++
Sbjct: 281 FLHALCKNHQVDKAIAFVKKIKDHGIQPYI 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ +MI + SP +VT++ALIYG+C +G+++EA
Sbjct: 93 YSTIIDSLCKDKLVTEAYVLYSEMITKRI-------SPDVVTFSALIYGFCIVGQLKEAF 145
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M ++PD ++NI++ FC+ G E K V+ + +G
Sbjct: 146 GLFHEMVLKNINPDVYTFNILVDAFCK---EGNTKEAK------------NVIAMMMKEG 190
Query: 140 -LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y SLM+ Y + KA + I+ G + + ++ ING K EA
Sbjct: 191 VIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEAL 250
Query: 199 EILLSMISNSCLSKTTH--------TTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEA 249
+ M H TY++ + C N++ + VK + G+
Sbjct: 251 NLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGI---- 306
Query: 250 ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+P YN LI C+ ++ A ++ ++ G+
Sbjct: 307 ------------QPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGY 341
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 60/337 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLIN---AYCLGGEFSKVSNLHDQMIHNGVL----------P 50
+G+ PD Y+SL + YF N A + E ++ + D + N ++ P
Sbjct: 589 KGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYDP 648
Query: 51 DFVTG-------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISG 103
V +P+ VTYN +I YC G +E+ALGIL M G+ P+AV+YNI+I G
Sbjct: 649 QNVCSRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGG 708
Query: 104 FCRIREPGKAYELKMEM-----------------DEKRILRMEEV--VYESLMQ-GLS-D 142
C+ + KA ++ EM R + + + ++ L+ GL
Sbjct: 709 LCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLT 768
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++L+ G KA ++ E+ G ++ VT + I G + +A + L
Sbjct: 769 LTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYL 828
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEF-KSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M + TTY+ L+ SN K ++V+G + RG V
Sbjct: 829 QMFVDGISPNI--TTYNTLLWGLSNAGLMKGTDKIVRGMKERGFV--------------- 871
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
P+ Y+ L+ + R N +++ Y M+ GFVP
Sbjct: 872 -PNAATYDILVSGYGRVGNKEESTKFYREMLTKGFVP 907
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 37/232 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
R L P TY++L I+AYC + +L +QMI NG++ D VT S
Sbjct: 309 RNLQPTLVTYTTL-------ISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCS------- 354
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+++Y C G++ EA + M EMGL P+ VSY +I+ + +A+ L+ +M
Sbjct: 355 SILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM-VV 413
Query: 124 RILRMEEVVYESLMQGL----SDEDA------------------YSSLMNDYLAQGDMEK 161
R + + V ++M GL ++A YS+L++ Y G+ME
Sbjct: 414 RGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMEL 473
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
A ++ +++ + +T S ING +KK +A ++L M+ + + T
Sbjct: 474 AELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNT 525
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 3 WRG-LSPDEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLP--DFVTGS 56
WRG + D TY++L A+ L A L E DQ+ +N V+ +
Sbjct: 253 WRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQ 312
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+LVTY LI YC VEE+L + M G+ D V+ + ++ CR GK E
Sbjct: 313 PTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCR---HGKLTEA 369
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ E +YE GL + +Y++++N G + +A+ L ++ G
Sbjct: 370 AVFFKE---------MYE---MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVS 417
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK--- 231
+ VT + ++GL K +T+EA+E+ +++ + TY AL++ C E +
Sbjct: 418 FDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNC--VTYSALLDGYCKLGEMELAE 475
Query: 232 ----------------SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
+ ++ G+ +G++S+A M+ N P+ VY LI
Sbjct: 476 LVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAF 535
Query: 276 CRCKNVDKAYNMYTRM-VH 293
R D A Y + VH
Sbjct: 536 FRAGKQDVANGYYKEIKVH 554
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 36/196 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+S D TY++L I YC G K + QM +G+ SP++
Sbjct: 795 MVKRGISADYVTYNAL-------IRGYCTGSHVEKAFKTYLQMFVDGI-------SPNIT 840
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L++G G ++ I+RGM E G P+A +Y+I++SG+ R+ ++ + EM
Sbjct: 841 TYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREM 900
Query: 121 DEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
L +G + Y+ L+N + G M KA L E+ G + S
Sbjct: 901 ---------------LTKGFVPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGRIPNSS 945
Query: 180 TESVFINGLSKKARTR 195
T + KAR R
Sbjct: 946 TYDIL------KARDR 955
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 138/353 (39%), Gaps = 76/353 (21%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
GL P+ +Y+++ N+ F G + NL QM+ GV D VT +
Sbjct: 380 GLDPNHVSYATIINSLFK-------SGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFK 432
Query: 57 --------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P+ VTY+AL+ GYC LG +E A +L+ M + + P+ ++
Sbjct: 433 VRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVIT 492
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL---SDEDA-------- 145
++ +I+G+ + KA ++ EM ++ I+ VY L+ +D
Sbjct: 493 FSSIINGYAKKGMLSKAVDVLREMVQRNIMP-NTFVYAILIDAFFRAGKQDVANGYYKEI 551
Query: 146 -----------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
+ L+N+ G M+ A L +++ G + V + I+G K+
Sbjct: 552 KVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNE 611
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
A I+ M +T +D + N K L+ L K +
Sbjct: 612 SAALSIVQEMTEK-------NTRFDVV---ACNTLIKGLLRLGK--------YDPQNVCS 653
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M+ P+ YN +I +C N++ A + M YG +P+ + LI
Sbjct: 654 RMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILI 706
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 69/339 (20%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD-----------FVTGSPSL-------- 59
+ S+IN Y G SK ++ +M+ ++P+ F G +
Sbjct: 492 TFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEI 551
Query: 60 ---------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
V ++ L+ +GR++ A +++ M G+ PD V+Y +I G+ +
Sbjct: 552 KVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNE 611
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGL---------------------SDEDAYSSL 149
A + EM EK R + V +L++GL + Y+++
Sbjct: 612 SAALSIVQEMTEKNT-RFDVVACNTLIKGLLRLGKYDPQNVCSRMIELGLAPNCVTYNTI 670
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
+N Y +G++E A + E+ G + +VT ++ I GL K ++A ++L M+
Sbjct: 671 INSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGV 730
Query: 210 L-SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
+ + TH +F LVK + + H+ ++ K VY
Sbjct: 731 VPTPITH-------------KF-----LVKAYSRFKKADTILQIHNKLIDMGLKLTLTVY 772
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N LI CR KA + MV G + ALI
Sbjct: 773 NTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALI 811
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ P T+ L AY A + +H+++I G+ +L
Sbjct: 725 MLVMGVVPTPITHKFLVKAYSRFKKA-------DTILQIHNKLIDMGL-------KLTLT 770
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN LI C LG +A +L M + G+S D V+YN +I G+C KA++ ++M
Sbjct: 771 VYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQM 830
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
I Y +L+ GLS+ Y L++ Y G+
Sbjct: 831 FVDGI-SPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGN 889
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
E++ RE+ G++ + T +V IN +K R +A E+ M + + + +TY
Sbjct: 890 KEESTKFYREMLTKGFVPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGRIPNS--STY 947
Query: 219 DAL 221
D L
Sbjct: 948 DIL 950
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT-----------GSPSL--------- 59
+ +L++ + G S+V ++ M+ GV+PD + G L
Sbjct: 93 WKNLLSEFNASGLVSQVKVMYSDMVFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND 152
Query: 60 ----VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
VTYN +I+G+C G V++ G+L M + GL D+++ NI++ G+CRI
Sbjct: 153 VIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRI-------- 204
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+R E V +L+ G +D ++L++ Y G M +A L +
Sbjct: 205 --------GFVRYAEWVMYNLVDGGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGD 256
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL 233
+ VT + + K + A E L + I + T D + +N N +L
Sbjct: 257 VEIDVVTYNTLLKAFCKMGDLKRA-ESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTL 315
Query: 234 V---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
V L+ + V E+ + M+ D + ++ CR + +A +
Sbjct: 316 VTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKE 375
Query: 291 MVHYGFVPHMFSVLALI 307
M G P+ S +I
Sbjct: 376 MYEMGLDPNHVSYATII 392
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 51/337 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL D T + L + YC G + ++ GV D ++
Sbjct: 182 MVKRGLCVDSITCNIL-------VKGYCRIGFVRYAEWVMYNLVDGGVTKD-------VI 227
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
N LI GYC G + +A+ ++ + D V+YN ++ FC++ + +A L E+
Sbjct: 228 GLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEI 287
Query: 121 -----DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
DE ++ + V + Y++L++ Y +E++ L ++ +G +
Sbjct: 288 FAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIM 347
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKS--L 233
S+ VT S + L + + EA M H +Y +I N+ FKS +
Sbjct: 348 SDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGL--DPNHVSYATII----NSLFKSGRV 401
Query: 234 VE--------LVKG---------------FRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
+E +V+G F++R EA +T+L N P+ Y+
Sbjct: 402 MEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRK-TKEAEEMFETILKLNLAPNCVTYSA 460
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
L+ +C+ ++ A + +M P++ + ++I
Sbjct: 461 LLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSII 497
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+++LI+ Y G FS S+ +M DFV PSL + L+ + G V +
Sbjct: 58 FYTLISLYLKCGRFSTASDTFSRMRAF----DFV---PSLHFWKNLLSEFNASGLVSQVK 110
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M G+ PD S N+++ C++ + A LR +V+
Sbjct: 111 VMYSDMVFCGVVPDVFSVNVLVHSLCKVGDLDLALGY---------LRNNDVI------- 154
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
D Y++++ + +G +++ + L E+ G +S+T ++ + G + R A+
Sbjct: 155 --DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEW 212
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
++ +++ T D + L L+ G+ GL+S+A + G
Sbjct: 213 VMYNLVDGG-------VTKDVI----------GLNTLIDGYCECGLMSQAMDLMEKRWRG 255
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
+ + D YN L+ C+ ++ +A +++ + +
Sbjct: 256 DVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIFAF 290
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 33/252 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P +VTY LI+G+C +G+ +EA+G+L M +S D ++N ++ G C+
Sbjct: 126 PDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCK---------- 175
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
E + + V+ + QG+ D Y SLM+ Y ++ KA + IA G +
Sbjct: 176 -----EGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVI 230
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+ SV INGL KK EA + + + T TY++LI+
Sbjct: 231 PSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDT--ITYNSLID------------ 276
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G G +S+ D M + D YN L+ C+ VDKA + T++ G
Sbjct: 277 ---GLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQG 333
Query: 296 FVPHMFSVLALI 307
P+M++ L+
Sbjct: 334 IQPNMYTYTILV 345
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 54/276 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD------FVT 54
M+ +G+ PD TY SL + YF L E +K + + + + +GV+P +
Sbjct: 189 MIKQGVDPDIFTYISLMDGYF-------LVKEVNKATYVFNTIARSGVIPSVQSYSVMIN 241
Query: 55 G----------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
G +P +TYN+LI G C GR+ + ++ M +G
Sbjct: 242 GLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPA 301
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D ++YN ++ C+ + KA L ++ ++ I + +Y Y+ L++
Sbjct: 302 DVITYNSLLDALCKNHQVDKAITLLTKIKDQGI---QPNMY-----------TYTILVDG 347
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL-- 210
G ++ A ++ + + GY + SV +NGL K+ +A ++ M NSC
Sbjct: 348 LCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPN 407
Query: 211 SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLV 246
+ T T AL EN N++ V+L++ +RG++
Sbjct: 408 AVTYETLIRALFENGKNDK---TVKLLREMIVRGIL 440
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 114/283 (40%), Gaps = 51/283 (18%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREP----- 110
+V + LI +C LG + A +L + ++G PD ++ V+ G C ++R+
Sbjct: 10 VVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKALHFHD 69
Query: 111 ---GKAYEL-----------------KMEM-----DEKRILRMEEVVYESLMQGL-SDED 144
K ++L K E+ K I+ + E +++ + D
Sbjct: 70 HVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMIVKRIFPDVV 129
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
Y++L++ + G ++A L ++ + T + ++GL K+ ++A+ +L M
Sbjct: 130 TYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVKQARNVLAVM 189
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
I + + + + L+ G+ + V++A +T+ P
Sbjct: 190 IKQGV-----------------DPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPS 232
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
Y+ +I C+ K VD+A N++ + P + +LI
Sbjct: 233 VQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLI 275
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G P T+++L I CL G + + HD+++ G D V
Sbjct: 122 ILKKGYHPTAITFNTL-------IKGLCLKGHIHQALHFHDKVVAQGFHLD-------QV 167
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +GR+ AL +L+ + + P+AV YN++I C+ + A++L +M
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 227
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D Y++L++ + A + A L ++ + T
Sbjct: 228 VAKRI--------------CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYT 273
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ++G K+ + +AK +L M+ + K TY++L++ CS N+
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDI--KPDVVTYNSLMDGYCSINK---------- 321
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
V++A D+M G + +Y ++ C+ K VD+A N++ M +P+
Sbjct: 322 ------VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPN 375
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 376 VVTYSSLI 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 47/297 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++ +C G+ + + M+ + + PD +VTYN+L+ GYC + +V +A I
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPD-------VVTYNSLMDGYCSINKVNKAKDIF 329
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
M G+ + Y +++GFC+I+ +A L EM ++I+ V Y SL+ GL
Sbjct: 330 DSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIP-NVVTYSSLIDGLCK 388
Query: 142 -----------DE----------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
DE YSS+++ ++KA L + G + T
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I GL + R +A+ + ++ L+ N + + +++GF
Sbjct: 449 YTILIKGLCQSGRLEDAQNV-----------------FEDLLVKGYNLDVYAYTVMIQGF 491
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+G +A M P+ Y +I+ D A + M+ G +
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 137/321 (42%), Gaps = 54/321 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + + PD TY++L + + ++ + + +L ++M + +P++
Sbjct: 227 MVAKRICPDVFTYNALISGFSAV-------SKLNYAIDLFNKMKKENI-------NPNVY 272
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N L+ G+C G+V +A +L M + + PD V+YN ++ G+C I + KA +
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKD----- 327
Query: 121 DEKRILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+++S+ G +++ Y++++N + +++A L E+ +
Sbjct: 328 -----------IFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL- 236
VT S I+GL K R A +++ M TY ++++ C N+ + L
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRG--QPPNIVTYSSILDALCKNHHVDKAIALL 434
Query: 237 ------------------VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+KG G + +A + +L + D Y +I C
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494
Query: 279 KNVDKAYNMYTRMVHYGFVPH 299
DKA + ++M G +P+
Sbjct: 495 GFFDKALALLSKMEDNGCIPN 515
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G P T+++L I CL G + + HD+++ G D V
Sbjct: 122 ILKKGYHPTAITFNTL-------IKGLCLKGHIHQALHFHDKVVAQGFHLD-------QV 167
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +GR+ AL +L+ + + P+AV YN++I C+ + A++L +M
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 227
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D Y++L++ + A + A L ++ + T
Sbjct: 228 VAKRI--------------CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYT 273
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ++G K+ + +AK +L M+ + K TY++L++ CS N+
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDI--KPDVVTYNSLMDGYCSINK---------- 321
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
V++A D+M G + +Y ++ C+ K VD+A N++ M +P+
Sbjct: 322 ------VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPN 375
Query: 300 MFSVLALI 307
+ + +LI
Sbjct: 376 VVTYSSLI 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 47/297 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++ +C G+ + + M+ + + PD +VTYN+L+ GYC + +V +A I
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPD-------VVTYNSLMDGYCSINKVNKAKDIF 329
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
M G+ + Y +++GFC+I+ +A L EM ++I+ V Y SL+ GL
Sbjct: 330 DSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIP-NVVTYSSLIDGLCK 388
Query: 142 -----------DE----------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
DE YSS+++ ++KA L + G + T
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I GL + R +A+ + ++ L+ N + + +++GF
Sbjct: 449 YTILIKGLCQSGRLEDAQNV-----------------FEDLLVKGYNLDVYAYTVMIQGF 491
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+G +A M P+ Y +I+ D A + M+ G +
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 137/321 (42%), Gaps = 54/321 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + + PD TY++L + + ++ + + +L ++M + +P++
Sbjct: 227 MVAKRICPDVFTYNALISGFSAV-------SKLNYAIDLFNKMKKENI-------NPNVY 272
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N L+ G+C G+V +A +L M + + PD V+YN ++ G+C I + KA +
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKD----- 327
Query: 121 DEKRILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+++S+ G +++ Y++++N + +++A L E+ +
Sbjct: 328 -----------IFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL- 236
VT S I+GL K R A +++ M TY ++++ C N+ + L
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRG--QPPNIVTYSSILDALCKNHHVDKAIALL 434
Query: 237 ------------------VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+KG G + +A + +L + D Y +I C
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494
Query: 279 KNVDKAYNMYTRMVHYGFVPH 299
DKA + ++M G +P+
Sbjct: 495 GFFDKALALLSKMEDNGCIPN 515
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 75/327 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------- 54
G+ PD TY+SL I +C G++ +V L +M++ + P+ T
Sbjct: 211 GIDPDILTYTSL-------IRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 263
Query: 55 ------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P +VT+N LI G+C G V EA + + E G+ PD S
Sbjct: 264 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 323
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE-------DAYSSL 149
Y I+I G+C+ + +A L EM K ++ ++ V+Y SL+ GL + +S++
Sbjct: 324 YTILIIGYCKCKRIDEAVSLFNEMRCKNMV-LDIVLYSSLIDGLCKSGRISYAWELFSTI 382
Query: 150 MND---------------YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
ND + D++ L + + G +T ++ ING K R
Sbjct: 383 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 442
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
REA LLS++ + L+ + TY++L + G G +S+A
Sbjct: 443 REAMN-LLSVMQSKNLAPDS-ITYNSLFD---------------GLCKSGRISDAWELFK 485
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNV 281
M G D YN L+ C+ ++V
Sbjct: 486 VMHVGGPPVDVATYNVLLDAFCKAQDV 512
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L RG P+ T +++ + C+ GE K + HD + G+L D V
Sbjct: 102 VLKRGYQPNNITLTTV-------MKGLCINGEVQKAMDFHDNVAAQGMLLD-------EV 147
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C +GR +A +L+ M + P+ V YN++I FC+ KA +L +++
Sbjct: 148 CYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKI 207
Query: 121 DEKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ I D D Y+SL+ + G + L E+ +
Sbjct: 208 VDMGI----------------DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 251
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T +V I+ +K + EA+ + ++ +++ + + L+
Sbjct: 252 YTFNVLIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLIS 294
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + G V EA + DT+ PD Y LI+ +C+CK +D+A +++ M
Sbjct: 295 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 347
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+++G++P T S IN YC GE ++ ++ G P+ +
Sbjct: 67 MVFKGVTPSIFTLSIW-------INCYCHLGEMGFAFSVLGIVLKRGY-------QPNNI 112
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T ++ G C G V++A+ + G+ D V Y +I+G C+I A++L EM
Sbjct: 113 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 172
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E ++++ V+Y ++ ++ + YL DM G + +T
Sbjct: 173 -EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM-------------GIDPDILT 218
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G + + E K+++ M+ N ++ +T ++ LI+ F
Sbjct: 219 YTSLIRGFCRTGQWGEVKQLMCEMV-NKNINPNVYT-FNVLID---------------AF 261
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+G + EA + M+ +PD +N LI HC NV +A ++ + G +P +
Sbjct: 262 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 321
Query: 301 FSVLALI 307
+S LI
Sbjct: 322 WSYTILI 328
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 49 LPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIR 108
LP PS++ +N +I + A+ +L+ M G++P + +I I+ +C +
Sbjct: 31 LPQISEPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLG 90
Query: 109 EPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
E G A+ + + + KR + + ++M+GL G+++KA
Sbjct: 91 EMGFAFSV-LGIVLKRGYQPNNITLTTVMKGLC-------------INGEVQKAMDFHDN 136
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSM---------------ISNSC---L 210
+A G L + V INGL K R+ +A ++L M I + C L
Sbjct: 137 VAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDEL 196
Query: 211 SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
+ Y +++ + + + L++GF G E + M++ N P+ +N
Sbjct: 197 TCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 256
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
LI CR + +A M+ MV G P + + LI
Sbjct: 257 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL+P TY+ LIN YC + NL M + PD +
Sbjct: 417 MCGKGLTPTVLTYN-------ILINGYCKSKRIREAMNLLSVMQSKNLAPDS-------I 462
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
TYN+L G C GR+ +A + + M G D +YN+++ FC+ ++
Sbjct: 463 TYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 511
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 122/287 (42%), Gaps = 55/287 (19%)
Query: 1 MLWRG-LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL 59
M+ RG + PD T++ L I+ C G S+ N+ MI G PD +
Sbjct: 271 MVVRGKVYPDVYTFNIL-------IDGLCKLGRVSEAYNVVAVMIKRGWKPD-------I 316
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+YNAL+ GYC G V EA + M E P+ +SY +I+G+C++R +A L E
Sbjct: 317 VSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTE 376
Query: 120 MDEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQG 157
M K ++ + V Y L+ GLS D Y+ L++DY
Sbjct: 377 MHNKNLVP-DTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHE 435
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+KA L + I G T ++ ++GL K R + AKEI + + C + T
Sbjct: 436 KFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGC--QPNIRT 493
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
Y+ +I G G + EA M++ N+ P+
Sbjct: 494 YNIMIH---------------GLCKEGFLDEAEALLYKMVNNNYLPN 525
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 140/301 (46%), Gaps = 42/301 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y S+I+ +C G F L D+M+ G + P + T+N LI G C LGRV EA
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKV------YPDVYTFNILIDGLCKLGRVSEA 300
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ M + G PD VSYN +++G+C G+A ++ +M E+
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER--------------T 346
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L + +Y +L+N Y +++A +L E+ + + ++VT + ++GLSK R+
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNE--------FKSLVE------------LVK 238
+++ +M ++ TY+ L+++ +E F+ ++E L+
Sbjct: 407 DLVEAMRASG--QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G G + A + +P+ YN +I C+ +D+A + +MV+ ++P
Sbjct: 465 GLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLP 524
Query: 299 H 299
+
Sbjct: 525 N 525
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ P T+S L NA+ L +G FS + N+ + G D + L
Sbjct: 101 IKPSLITFSILINAFAQLGQ---MGFAFSLLGNI----LKMGFQID-------VRILTTL 146
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ G C GRV EA+ +L + G D V Y +I+G C+I + A ++ +M + R+
Sbjct: 147 MKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRV 206
Query: 126 ---LRMEEVVYESLM-QGLSDED-----------------AYSSLMNDYLAQGDMEKAY- 163
L M V + L QGL DE +Y+S+++ + + G + A
Sbjct: 207 YPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVK 266
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+LD + + T ++ I+GL K R EA ++ MI K +Y+AL+
Sbjct: 267 LLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG--WKPDIVSYNALMN 324
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
G+ + G V EA + D M+ P+ Y LI +C+ + VD+
Sbjct: 325 ---------------GYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDE 369
Query: 284 AYNMYTRMVHYGFVP 298
A + T M + VP
Sbjct: 370 AMVLLTEMHNKNLVP 384
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 129/321 (40%), Gaps = 57/321 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG DE Y ++ IN C G+ + +M V P+ L+ YN
Sbjct: 169 RGFRFDEVCYGTI-------INGLCKIGKTRDAIQMFPKMKKIRVYPN-------LIMYN 214
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G C G V+EA G+ M E G+ D SYN +I GFC + A +L EM +
Sbjct: 215 TVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVR 274
Query: 124 RILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEK 161
+ + + L+ GL D +Y++LMN Y G + +
Sbjct: 275 GKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGE 334
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A + ++ L ++ ING K EA +L M + + + T TY+ L
Sbjct: 335 AKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT--VTYNCL 392
Query: 222 IENCSNNEFKSLVE--LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
++ S + +SL E LV+ R G D YN L+ ++ + +
Sbjct: 393 LDGLSKSG-RSLYEWDLVEAMRASG----------------QPADLITYNVLLDDYFKHE 435
Query: 280 NVDKAYNMYTRMVHYGFVPHM 300
DKA ++ ++ G P++
Sbjct: 436 KFDKALALFQHIIEIGISPNI 456
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 145/327 (44%), Gaps = 54/327 (16%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G++PD T++ L IN YC E + ++ +++ G PD +T+
Sbjct: 96 FHGITPDIFTFNIL-------INCYCHMAEMNFAFSMMAKILKMGYEPD-------TITF 141
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G+V+EAL + +G D SY +I+G C+I E A ++ ++D
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201
Query: 123 KRILRMEEVVYESLMQGLSDE----DAY------------------SSLMNDYLAQGDME 160
K ++++ V+Y +++ L DAY S+L+ + G +E
Sbjct: 202 K-LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
+A+ L RE+ + T ++ ++ L K+ + AK +L+ M+ + TY +
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNV--VTYSS 318
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L++ G+ + V++A +T+ P+ Y +I C+ K
Sbjct: 319 LMD---------------GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD+A +++ M G P + +LI
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C L+ QMI + SP +VT++ALIYG+C +G++EEA
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKI-------SPDVVTFSALIYGFCIVGQLEEAF 263
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ R M ++PD ++NI++ C+ A + + M ++ ++ V Y SLM G
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDG 322
Query: 140 ----------------------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+ +Y +++N + +++A L ++ G +
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
VT + I+GL K R A E++ M N TY+ LI+ C N+ + L
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEMHDNG--QPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
VK + +G+ +PD +N LI C+ + A +++ ++ G+
Sbjct: 441 VKKIKDQGI----------------QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 75/347 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SPD T+S+L I +C+ G+ + L +M+ + PD+ T +
Sbjct: 234 MIAKKISPDVVTFSAL-------IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY++L+ GYC + +V +A +L + +MG +P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED-------- 144
+A SY +I+GFC+I+ +A L +M K I ++V Y SL+ GL
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP-DKVTYNSLIDGLCKSGRISYAWEL 405
Query: 145 --------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
Y+ L++ +++A L ++I G + T ++ I GL K
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
R + A+++ ++S TY+ + V G GL EA
Sbjct: 466 VGRLKNAQDVFQDLLSKG--YSVNAWTYNIM---------------VNGLCKEGLFDEAE 508
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M PD Y LI +KA + M+ G +
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARGLL 555
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A+ + R + G++PD ++NI+I+ +C + E A+ + +IL+M YE
Sbjct: 87 AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMM-----AKILKMG---YE--- 135
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D +++L+ G +++A + G+ + + INGL K TR A
Sbjct: 136 ---PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192
Query: 198 KEILL---------------SMISNSCLSKTT---HTTYDALIENCSNNEFKSLVELVKG 239
++L ++I + C K + Y +I + + + L+ G
Sbjct: 193 LQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYG 252
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
F + G + EA M+ N PD +N L+ C+ N+ A NM M+ G +P+
Sbjct: 253 FCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN 312
Query: 300 MFSVLALI 307
+ + +L+
Sbjct: 313 VVTYSSLM 320
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 145/327 (44%), Gaps = 54/327 (16%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G++PD T++ L IN YC E + ++ +++ G PD +T+
Sbjct: 96 FHGITPDIFTFNIL-------INCYCHMAEMNFAFSMMAKILKMGYEPD-------TITF 141
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G+V+EAL + +G D SY +I+G C+I E A ++ ++D
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201
Query: 123 KRILRMEEVVYESLMQGLSDE----DAY------------------SSLMNDYLAQGDME 160
K ++++ V+Y +++ L DAY S+L+ + G +E
Sbjct: 202 K-LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
+A+ L RE+ + T ++ ++ L K+ + AK +L+ M+ + TY +
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNV--VTYSS 318
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L++ G+ + V++A +T+ P+ Y +I C+ K
Sbjct: 319 LMD---------------GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD+A +++ M G P + +LI
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C L+ QMI + SP +VT++ALIYG+C +G++EEA
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKI-------SPDVVTFSALIYGFCIVGQLEEAF 263
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ R M ++PD ++NI++ C+ A + + M ++ ++ V Y SLM G
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDG 322
Query: 140 ----------------------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+ +Y +++N + +++A L ++ G +
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
VT + I+GL K R A E++ M N TY+ LI+ C N+ + L
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEMHDNG--QPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
VK + +G+ +PD +N LI C+ + A +++ ++ G+
Sbjct: 441 VKKIKDQGI----------------QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 75/347 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SPD T+S+L I +C+ G+ + L +M+ + PD+ T +
Sbjct: 234 MIAKKISPDVVTFSAL-------IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY++L+ GYC + +V +A +L + +MG +P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED-------- 144
+A SY +I+GFC+I+ +A L +M K I ++V Y SL+ GL
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP-DKVTYNSLIDGLCKSGRISYAWEL 405
Query: 145 --------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
Y+ L++ +++A L ++I G + T ++ I GL K
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
R + A+++ ++S TY+ + V G GL EA
Sbjct: 466 VGRLKNAQDVFQDLLSKG--YSVNAWTYNIM---------------VNGLCKEGLFDEAE 508
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M PD Y LI +KA + M+ G +
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARGLL 555
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A+ + R + G++PD ++NI+I+ +C + E A+ + +IL+M YE
Sbjct: 87 AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMM-----AKILKMG---YE--- 135
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D +++L+ G +++A + G+ + + INGL K TR A
Sbjct: 136 ---PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192
Query: 198 KEILL---------------SMISNSCLSKTT---HTTYDALIENCSNNEFKSLVELVKG 239
++L ++I + C K + Y +I + + + L+ G
Sbjct: 193 LQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYG 252
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
F + G + EA M+ N PD +N L+ C+ N+ A NM M+ G +P+
Sbjct: 253 FCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN 312
Query: 300 MFSVLALI 307
+ + +L+
Sbjct: 313 VVTYSSLM 320
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 48/337 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +SP+ T++ L +NA C G+F L +M G P + V
Sbjct: 170 MIANRVSPNVATFNIL-------LNALCERGKFKSAGVLLRKMDETGHFP-------TAV 215
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ YC GR + A ++ M G++ D +YN++I CR K Y + M
Sbjct: 216 TYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRM 275
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
K ++ E+ Y +L+ GL E Y++L+ + + G+
Sbjct: 276 -RKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGN 334
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+E+A L + G VT +NG+SK A+ +L M + + H +Y
Sbjct: 335 IEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGV--RVGHISY 392
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK-------PDGGVYNF 270
+I+ C N + V+L+ ++ VS +++G K P+ +++
Sbjct: 393 TTMIDGLCKNGLLEEAVQLLDDM-LKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHST 451
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
LI +C+ N+ +A N Y M G V F+ L+
Sbjct: 452 LIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLV 488
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
V +A+ R M G SP + N+V+ + RE + EM R+
Sbjct: 125 VGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRV--------- 175
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
+ ++ L+N +G + A +L R++ G+ +VT + +N KK R
Sbjct: 176 -----SPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRY 230
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEF-----------KSLV-------- 234
+ A E++ +M S + TY+ LI++ C + K++V
Sbjct: 231 KAASELIDAMASKGIAADV--CTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYN 288
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
L+ G G + A + + M N P+ YN LI HC N+++A + MV +
Sbjct: 289 TLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSH 348
Query: 295 GFVPHMFSVLALI 307
G P+ + AL+
Sbjct: 349 GLRPNEVTYGALL 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 132/351 (37%), Gaps = 77/351 (21%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
M+ GL P+E TY +L N +Y ++I+ C G
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGL 404
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGS---------------PSLVTYNALIYGYCFLGRVEE 77
+ L D M+ V PD VT S P+ V ++ LIY YC +G ++E
Sbjct: 405 LEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHSTLIYNYCKMGNLKE 464
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
AL M + G D + +++++ FCR G+ E + +D + S M
Sbjct: 465 ALNAYAVMNQSGHVSDHFTSSVLVASFCRC---GRLEEAEYFVD-----------HMSRM 510
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ +++ Y GD KA+ + ++ G+L T + GL EA
Sbjct: 511 GLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEA 570
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
K + M S + +T+ + +++ L G +S A D M+
Sbjct: 571 K---IFMHRPSSIPYAIGSTF-----------YNTMLTLTS---RSGNLSNAVALLDEMV 613
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV---PHMFSVLA 305
N PD Y LI CR + A + R + G + P M++ L
Sbjct: 614 MNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLV 664
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 117/308 (37%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G +PD T+ SL I YC G ++ G D
Sbjct: 753 MIIHGFAPDRLTWHSL-------ILGYCKSGSLDVAVKFLRKITVEGFKVD-------CF 798
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N L+ C ++ A +++ + +G++P+ +YN + +GF R
Sbjct: 799 TLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR----------TCSF 848
Query: 121 DEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
DE R +++ L G + +++L+ G+++ A L E+ G S+ V
Sbjct: 849 DEARC-----ILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGV 903
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
S I GL++ +T EA IL M+ + T T+ L+
Sbjct: 904 AMSAIIRGLARSRKTDEATRILGIMLEMQIIP--TVATFTTLMHT--------------- 946
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G V++A M + K D YN LI C ++ A+ +Y M P+
Sbjct: 947 YCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPN 1006
Query: 300 MFSVLALI 307
+ LI
Sbjct: 1007 TSIYIVLI 1014
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN ++ G + A+ +L M PD+ +Y +I+G CR + A L
Sbjct: 589 YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 648
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
EK +L +Y SL+ GL L +G + A + ++ ++G +++
Sbjct: 649 EKGLLSPNPAMYTSLVDGL-------------LKEGHSKAALYMFEDMLNEGVQPDAIAF 695
Query: 182 SVFINGLSKKARTREAKEILLSMISNS-CLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+V ++ S+K + + +IL +M S S C + T+ L+ G+
Sbjct: 696 NVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNI------------------LLHGY 737
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
R ++ ++ ++ M+ PD ++ LI+ +C+ ++D A ++ GF
Sbjct: 738 SKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDC 797
Query: 301 FSVLALI 307
F++ L+
Sbjct: 798 FTLNVLV 804
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 129/326 (39%), Gaps = 41/326 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G + ++G S Y SL++ G + + M++ GV PD +
Sbjct: 641 LLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPD-------AI 693
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+N L+ Y G++ + IL M L + +YNI++ G+ + + +L EM
Sbjct: 694 AFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEM 753
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
++ G + D + SL+ Y G ++ A R+I +G+ +
Sbjct: 754 ---------------IIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCF 798
Query: 180 TESVFINGLSKKARTREAKEIL--LSMISNSCLSKTTHTTYDALIENCSNNE-------- 229
T +V ++ L ++ + A +++ L+M+ + T ++ ++ + CS +E
Sbjct: 799 TLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHAL 858
Query: 230 --------FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
K L++G G V A D M G + +I R +
Sbjct: 859 LENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKT 918
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D+A + M+ +P + + L+
Sbjct: 919 DEATRILGIMLEMQIIPTVATFTTLM 944
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 40/252 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++ C E +L Q+ GV +P++ TYN+L G+ +EA IL
Sbjct: 803 LVSKLCERNEIKMAFDLVKQLNMLGV-------TPNVDTYNSLFNGFVRTCSFDEARCIL 855
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM--EEVVYESLMQGL 140
+ E G +P + +I G CR+ A EL+ DE +IL + + V ++++GL
Sbjct: 856 HALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQ---DEMKILGVSSQGVAMSAIIRGL 912
Query: 141 -----SDE-----------------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+DE +++LM+ Y +G++ KA L R + ++
Sbjct: 913 ARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALEL-RSVMEQCHVKLD 971
Query: 179 VTE-SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN--CSNNEFKSLVE 235
V +V I+GL + A ++ M T + Y LI++ C+ N +
Sbjct: 972 VAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNT--SIYIVLIDSFLCTGNYIVESEK 1029
Query: 236 LVKGFRMRGLVS 247
L++ R R L+S
Sbjct: 1030 LLRDLRTRELMS 1041
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 41/281 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++PD T++ L ++A C G+ + M+ GV+PD +V
Sbjct: 262 MVLKNINPDVYTFNIL-------VDALCKEGDVKGAKSFLVVMMKEGVIPD-------VV 307
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+++ G+C + V +A +L + +G++P A SY+I+I+GFC+I+ +A L EM
Sbjct: 308 TYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEM 367
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
R + V Y SL+ GL YSSL++
Sbjct: 368 -RCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNH 426
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++I G + T ++ I+GL K R + A+++ +++ +Y
Sbjct: 427 LDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKG--YSLNIRSY 484
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ LI C + F L+ + ++ +A ++T++H
Sbjct: 485 NILINGLCKDGLFDKAEALLSKMKGNDVIPDAV-TYETIIH 524
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C S L+ +MI + SP++VT++ALIYG+C +G+++EA
Sbjct: 204 YNTVIDSLCKDKLVSDAYELYSEMITKKI-------SPTVVTFSALIYGFCIVGQLKEAF 256
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G++ M ++PD ++NI++ C+ + A + M M+E V
Sbjct: 257 GLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVM-------MKEGV------- 302
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ D Y+S+M+ + ++ KA L I+ G + + S+ ING K EA
Sbjct: 303 IPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALS 362
Query: 200 ILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M T TY +LI+ C + F ELV + G
Sbjct: 363 LFYEMRCRGIAPNT--VTYSSLIDGLCKSGRFSCAWELVDEMHVNG-------------- 406
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ Y+ LI C+ ++DKA + ++ G P M++ LI
Sbjct: 407 --QPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILI 453
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 40/287 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L+ CL G+ ++ + HD ++ G D VTY LI G C +G+ +EAL +
Sbjct: 136 TLMKGLCLNGKVNEAIHFHDHVLALGFHLD-------QVTYGTLINGLCKMGKTKEALQV 188
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + ++ + V YN VI C+ + AYEL EM K+I VV
Sbjct: 189 LRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKI--SPTVV--------- 237
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+S+L+ + G +++A+ L ++ + T ++ ++ L K+ + AK L
Sbjct: 238 ---TFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFL 294
Query: 202 LSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
+ M+ + TY+++++ +C NE K + ++S A
Sbjct: 295 VVMMKEGVIPDV--VTYNSIMDGHCLVNEVN------KAKHLLSIISRIGVA-------- 338
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P Y+ +I C+ K +D+A +++ M G P+ + +LI
Sbjct: 339 --PSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLI 383
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++P+ TYSSL I+ C G FS L D+M NG P++
Sbjct: 367 MRCRGIAPNTVTYSSL-------IDGLCKSGRFSCAWELVDEMHVNG-------QPPNIF 412
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI C +++A+ +++ + + G+ PD +YNI+I G C+
Sbjct: 413 TYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCK-------------- 458
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
R+ ++V + L +G S + +Y+ L+N G +KA L ++ + + ++V
Sbjct: 459 -GGRLKNAQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAV 517
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T I+ L K +A+++L M+ L
Sbjct: 518 TYETIIHSLFYKDENEKAEKLLREMLGRGLL 548
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ V +L Q+ NG+ P++V+ + LI YC LG++ A IL + +MG P
Sbjct: 77 YPTVISLSYQLEFNGI-------KPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHP 129
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL--RMEEVVYESLMQGLSDEDAYSSLM 150
+ +++N ++ G C GK E D L +++V Y +L+ GL
Sbjct: 130 NTITFNTLMKGLCL---NGKVNEAIHFHDHVLALGFHLDQVTYGTLINGLC--------- 177
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
G ++A + R I + V + I+ L K +A E+ MI+
Sbjct: 178 ----KMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKI- 232
Query: 211 SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
T T+ ALI GF + G + EA M+ N PD +N
Sbjct: 233 -SPTVVTFSALIY---------------GFCIVGQLKEAFGLVHQMVLKNINPDVYTFNI 276
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
L+ C+ +V A + M+ G +P + +
Sbjct: 277 LVDALCKEGDVKGAKSFLVVMMKEGVIPDVVT 308
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 61/300 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SPD TY+SL I+ +C+ G+ +V L ++M+ + PD T +
Sbjct: 224 MIRKRISPDVFTYTSL-------IHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVD 276
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY+ L+ GYC + V +A I M + G++P
Sbjct: 277 ALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTP 336
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------------ 140
D SY I+I+G C+++ +A L EM + ++ + Y SL+ GL
Sbjct: 337 DIQSYTIMINGLCKMKMLDEAVSLFEEMHSTN-MTLDVITYSSLINGLCKSGRLISAWKL 395
Query: 141 ----------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
D Y+SL++ +KA L ++ G ++ T ++ I+GL K
Sbjct: 396 FDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCK 455
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEA 249
R +A++I ++ S TY+ +I C + + L+ +G + +A
Sbjct: 456 DGRLDDAQKIFRDLLIKS--YNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDA 513
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 139/348 (39%), Gaps = 56/348 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD +FN +LI CL + + + HD+++ G S V
Sbjct: 118 ILKMGCHPD----VIIFN---TLIKGLCLNNDVKEALHFHDKLVAQGF-------QLSKV 163
Query: 61 TYNALIYGYCFLGRVEEALGILRGMP-EMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
+Y LI G C +G+ + AL +LR + ++ PD V Y+I+I C+ + A++L E
Sbjct: 164 SYGTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSE 223
Query: 120 MDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQG 157
M KRI + Y SL+ G D +++L++ +G
Sbjct: 224 MIRKRI-SPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEG 282
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLS-------------- 203
+++A L + +G VT SV ++G +AK+I S
Sbjct: 283 KVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYT 342
Query: 204 -MISNSCLSKTTHTTYDALIENCSNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHG 259
MI+ C K E S N ++ L+ G G + A + D ML
Sbjct: 343 IMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDR 402
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN L+ C+ DKA + ++M G +F+ LI
Sbjct: 403 GQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILI 450
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 123/317 (38%), Gaps = 83/317 (26%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
FS V +L QM +F PS+VT + LI Y L +++ A + + +MG P
Sbjct: 73 FSTVISLFRQM-------EFQRIHPSIVTLSILINCYSHLRQMKFAFSLFGKILKMGCHP 125
Query: 93 DA-----------------------------------VSYNIVISGFCRIREPGKAYELK 117
D VSY +I+G C++ + A +L
Sbjct: 126 DVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLL 185
Query: 118 MEMDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLA 155
++ + + R + V+Y ++ L D Y+SL++ +
Sbjct: 186 RRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCI 245
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
G +++ ++L E+ + T + ++ L K+ + +EAK ++ M+ +
Sbjct: 246 VGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGV--EPNI 303
Query: 216 TTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
TY L++ C NE V++A ++M+ PD Y +I
Sbjct: 304 VTYSVLMDGYCLVNE----------------VNKAKDIFNSMMQRGMTPDIQSYTIMING 347
Query: 275 HCRCKNVDKAYNMYTRM 291
C+ K +D+A +++ M
Sbjct: 348 LCKMKMLDEAVSLFEEM 364
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 40/274 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y + INAYC GG+ + L +M GVLP+ +VTYN LI G C GR+EEA
Sbjct: 247 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPN-------VVTYNNLIDGLCKSGRLEEA 299
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L M E ++P V+Y I+++G + + +A + +EM K
Sbjct: 300 LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSK--------------- 344
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G S +E +++L++ Y +G+M+ A + ++ G +VT + + G + + +A
Sbjct: 345 GFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 404
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+++L ++SN LS L C +++F S +++VK +R + + +D++L
Sbjct: 405 EQVLEYLLSN-VLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNI-----KVNDSLL 458
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
L+ C+C +A +++ R+
Sbjct: 459 -----------TLLVCGLCKCGKHLEAIDLWFRL 481
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 31/252 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+ + T NAL+YG C G +EE + + M E GL D +SYN +I G C+ + +A++
Sbjct: 488 AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK 547
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
LK +M K+ + + Y LM+GL+D +G M+ + E G +
Sbjct: 548 LKEKM-MKQGFKPDTYTYNFLMKGLAD-------------KGKMDDVGRVLHEAKDHGVV 593
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
T ++ + G R A + ++ N + ++ Y+ LI S
Sbjct: 594 PNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV--ELSYVVYNILIAAHSK-------- 643
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G +EA + D M N P Y+ +I C V++A ++ M + G
Sbjct: 644 -------AGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEG 696
Query: 296 FVPHMFSVLALI 307
+P++F ALI
Sbjct: 697 LMPNVFCYTALI 708
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+EG ++F Y +LI YC G+ ++ ++ +M N + P+ +TY +I G
Sbjct: 694 NEGLMPNVF-CYTALIGGYCKLGQMDQIESILQEMTSNCI-------QPNKITYTIMIDG 745
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
YC +G +EA +L M G+SPD V+Y ++ G+C K EL+ + + +
Sbjct: 746 YCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYC------KENELEETLQGDTAVPL 799
Query: 129 EEVVYESLMQGL 140
EE+ Y +L+ L
Sbjct: 800 EEITYTTLVDKL 811
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A+ G F++ L D M + + P++ TY+++I+G C VEEA
Sbjct: 633 VYNILIAAHSKAGNFTEAFKLRDAMRSSNI-------HPTIFTYSSIIHGMCCNDLVEEA 685
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
GI M GL P+ Y +I G+C++ + + + EM I
Sbjct: 686 KGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCI------------- 732
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
++ Y+ +++ Y G+ ++A L E+ +G ++VT +V G K+ E
Sbjct: 733 -QPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETL 791
Query: 199 E----ILLSMISNSCLSKTTHTTYDALIEN 224
+ + L I+ + L H DA + N
Sbjct: 792 QGDTAVPLEEITYTTLVDKLHPHSDAALSN 821
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 46/318 (14%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
LW L+ +G ++ + +L+ C G +V + +M+ G++ D ++
Sbjct: 477 LWFRLADKKGLAANTTTSN-ALLYGLCERGNMEEVFPVCKEMVERGLVLDGIS------- 528
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN LI+G C G++EEA + M + G PD +YN ++ G + + GK MD
Sbjct: 529 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKG---LADKGK-------MD 578
Query: 122 EKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + V++E+ G + + Y+ ++ Y ++ A L ++ ++ V
Sbjct: 579 D-----VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVV 633
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNN---EFKSLVE- 235
++ I SK EA ++ +M S++ T TY ++I C N+ E K + E
Sbjct: 634 YNILIAAHSKAGNFTEAFKLRDAMRSSNI--HPTIFTYSSIIHGMCCNDLVEEAKGIFEE 691
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ G+ G + + M +P+ Y +I +C+ N
Sbjct: 692 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGN 751
Query: 281 VDKAYNMYTRMVHYGFVP 298
+A + M+ G P
Sbjct: 752 TKEATKLLNEMIANGISP 769
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 54/299 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL D +Y++L I C G+ + L ++M+ G PD
Sbjct: 517 MVERGLVLDGISYNTL-------IFGCCKSGKIEEAFKLKEKMMKQGFKPD-------TY 562
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ G G++++ +L + G+ P+ +Y +++ G+C A L ++
Sbjct: 563 TYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKL 622
Query: 121 DEKRILRMEEVVYESLMQGLSD----------EDA------------YSSLMNDYLAQGD 158
++ + VVY L+ S DA YSS+++
Sbjct: 623 VYNKV-ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDL 681
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+E+A + E+ ++G + + I G K + + + IL M SN C+ + TY
Sbjct: 682 VEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSN-CI-QPNKITY 739
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
+I+ G+ G EA + + M+ PD Y L +C+
Sbjct: 740 TIMID---------------GYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCK 783
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 46/300 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G SPD TY+++ I+ +C E + + +++ NG + +P +V+Y
Sbjct: 243 GCSPDVITYNTI-------IHGFCRISEVDRARSFLNEVCLNGQV------APDVVSYTT 289
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I GYC L R++EA + M G P+A ++N +I GF ++ + + + +M
Sbjct: 290 IISGYCKLSRMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKM---- 345
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
L +G + D ++SL+N Y G ++ A + E+ + T SV
Sbjct: 346 -----------LFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSV 394
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
+NG K R EA++IL + K + + + N ++ G+
Sbjct: 395 LVNGFCKNNRLHEARDILTRL-------KQSDVVPQSFVYN----------PVIDGYCKS 437
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
G V EA + M KPD Y LI+ HC + +A ++ +M+ P ++
Sbjct: 438 GNVDEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVCCAPDEITI 497
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML+RG +PD T++SL N YF + G+ + ++M V + SL
Sbjct: 345 MLFRGCNPDVVTFTSLINGYFVV-------GQVKPALEMWNEMNSRKV-------AASLY 390
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T++ L+ G+C R+ EA IL + + + P + YN VI G+C+ +A ++ EM
Sbjct: 391 TFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDEANKILAEM 450
Query: 121 DEKRILRMEEVVYESLMQG 139
+E R + +++ Y L+ G
Sbjct: 451 EENRC-KPDKLTYTILIIG 468
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 45/293 (15%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
++G+ PD TY+ L N + L + + FS +N+ + H P +VT+
Sbjct: 91 FKGIKPDLFTYNVLINCFSQLGHTH---FAFSLFANILKRGYH-----------PDIVTF 136
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G V +AL + + D VSY +I+G C++ E A L E++E
Sbjct: 137 NTLINGLCLKGEVHKALNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNE 196
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
K I++ + V+Y +++ GL + L++D A+ L E+ + T +
Sbjct: 197 K-IVQYDVVMYTAIINGLCKD----KLVDD---------AFDLYTEMVAKRVSPDVFTYN 242
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
I G R ++A + D +EN +E+ + LV F
Sbjct: 243 AMIYGFCVVGRLKDAIGLF----------------NDMKLENVEADEY-TFNTLVSAFCK 285
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G V E M+ KPD YN L+ +C K VDKA N++ MV G
Sbjct: 286 EGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRG 338
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + DE T+++L ++A+C G + + M+ GV PD ++
Sbjct: 264 MKLENVEADEYTFNTL-------VSAFCKEGNVREGKAVVAVMMKEGVKPD-------II 309
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GYC + V++A I M + G++ + SY+I+I+GFC+++ +A L EM
Sbjct: 310 TYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEM 369
Query: 121 DEKRILRMEEVVYESLMQG------------LSDE----------DAYSSLMNDYLAQGD 158
K I+ + + Y SL+ G L DE Y+S++
Sbjct: 370 HCKEIIP-DTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHH 428
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+EK L R+I G ++ T ++ NGL K R EA+EI
Sbjct: 429 VEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIF 471
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 44/286 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++IN C +L+ +M+ V SP + TYNA+IYG+C +GR+++A+
Sbjct: 206 YTAIINGLCKDKLVDDAFDLYTEMVAKRV-------SPDVFTYNAMIYGFCVVGRLKDAI 258
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELKMEMDEKRILRMEEVVYESL 136
G+ M + D ++N ++S FC+ +RE GKA M M+E V +
Sbjct: 259 GLFNDMKLENVEADEYTFNTLVSAFCKEGNVRE-GKAVVAVM---------MKEGVKPDI 308
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+ Y+SLM+ Y +++KA + + G + + S+ ING K E
Sbjct: 309 I-------TYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDE 361
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
A + M + T Y +LI+ GF G + +A D M
Sbjct: 362 AMNLFQEMHCKEIIPDT--IAYSSLID---------------GFCKSGRIPQALELVDEM 404
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
P+ YN ++ C+ +V+K + ++ G P ++
Sbjct: 405 HDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYT 450
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 123/299 (41%), Gaps = 45/299 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG PD TY+ L I +C G + DQ++ + P+++
Sbjct: 172 MKKRGFEPDVVTYNIL-------IGNFCGRGRLDLALRVMDQLLKDNC-------KPTVI 217
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G ++EA+ +L M GL PD +YN+V++G C+ +A+E
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF---- 273
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + + G+S Y+ L+ D L +G E L ++ G +T
Sbjct: 274 -------LSRISKNGCVAGVS---TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S I L + + EAK +L ++ L+ ++ YD LI
Sbjct: 324 YSTLITALCRDGKIDEAKNVL-KVMKEKALAPDGYS-YDPLIS---------------AL 366
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G V A D M+ G H PD YN ++ C+ N D+A N++ ++ G P+
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 40/270 (14%)
Query: 55 GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA- 113
G P + YNA+I G+C RV+ A +L M + G PD V+YNI+I FC G+
Sbjct: 142 GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFC-----GRGR 196
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+L + + M++++ ++ + Y+ L+ + QG +++A L E+ G
Sbjct: 197 LDLALRV-------MDQLLKDNCKPTVI---TYTILIEATITQGGIDEAMKLLDEMLSRG 246
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY--------------- 218
+ T +V +NG+ K+ A E L + N C++ +TY
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGV--STYNILLRDLLNEGKWEY 304
Query: 219 ------DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
D L++ C N + L+ G + EA M PDG Y+ LI
Sbjct: 305 GEKLMSDMLVKGCEPNPI-TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
CR VD A M+ G +P + S
Sbjct: 364 SALCREGKVDLAIEFLDDMISGGHLPDILS 393
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 62/257 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGE 32
ML +G P+ TYS+L A Y LI+A C G+
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
D MI G LPD +++YN+++ C G +EAL I + E+G P
Sbjct: 372 VDLAIEFLDDMISGGHLPD-------ILSYNSILASLCKNGNADEALNIFEKLGEVGCPP 424
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMN 151
+A SYN + L D+ R L M + E L G+ DE Y+SL++
Sbjct: 425 NAGSYNTLFGA------------LWSSGDKIRALGM---ILEMLSNGIDPDEITYNSLIS 469
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVF-----INGLSKKARTREAKEILLSMIS 206
G +++A E+ D + SE +V + GL K R +A E+L +M++
Sbjct: 470 CLCRDGLVDQAI----ELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525
Query: 207 NSCLSKTTHTTYDALIE 223
CL TTY LI+
Sbjct: 526 EGCLP--NETTYTLLIQ 540
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 135/331 (40%), Gaps = 57/331 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAY---------FSLINAYCLGGEFSKVSN---LHDQMIHNG- 47
ML RGL PD TY+ + N F ++ G + VS L +++ G
Sbjct: 242 MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301
Query: 48 ------VLPDFVTG--SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
++ D + P+ +TY+ LI C G+++EA +L+ M E L+PD SY+
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 100 VISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQG 157
+IS CR GK +L +E + ++ G L D +Y+S++ G
Sbjct: 362 LISALCR---EGKV-DLAIEF------------LDDMISGGHLPDILSYNSILASLCKNG 405
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+ ++A + ++ G + + + L A ++L M+SN T
Sbjct: 406 NADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGI--DPDEIT 463
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH-KPDGGVYNFLIVEHC 276
Y++LI + GLV +A M +P YN +++ C
Sbjct: 464 YNSLISCLCRD---------------GLVDQAIELLVDMFESEKCQPTVISYNTVLLGLC 508
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + + A + MV+ G +P+ + LI
Sbjct: 509 KVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C + +E+L L+ M G PD + +I GF +++ KA ++ ME+ EK
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV-MEILEK------ 140
Query: 130 EVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA-YILDREIAHDGYLSESVTESVFINGL 188
G D AY+++++ + ++ A +LDR + G+ + VT ++ I
Sbjct: 141 --------HGKPDVFAYNAVISGFCKADRVDHASKVLDR-MKKRGFEPDVVTYNILIGNF 191
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
+ R A ++ ++ ++C K T TY LIE +G + E
Sbjct: 192 CGRGRLDLALRVMDQLLKDNC--KPTVITYTILIE---------------ATITQGGIDE 234
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
A + D ML +PD YN ++ C+ +D+A+ +R+ G V
Sbjct: 235 AMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCV 283
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 56/321 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + + PD TY++L IN +C+ G+ L ++M + PD T +
Sbjct: 267 MVSKRIFPDVNTYNAL-------INGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 319
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTYN+L+ YC + V +A I M G++
Sbjct: 320 AFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTA 379
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL--SDEDAYSSLM 150
+ SY+I+I+ FC+I+ +A +L EM K+I + Y SL+ GL S +Y+ +
Sbjct: 380 NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFP-NVITYSSLIDGLCKSGRISYALEL 438
Query: 151 NDYL-AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
ND + +G L R++ G T ++ I+GL K R +A+ I ++
Sbjct: 439 NDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKG- 497
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
T TY +I GF +GL EA M P+ Y
Sbjct: 498 -YNITVNTYTVMIH---------------GFCNKGLFDEAMTLLSKMKDNCCIPNAVTYE 541
Query: 270 FLIVEHCRCKNVDKAYNMYTR 290
+I DKA N + +
Sbjct: 542 IIIRSLFDNDENDKAENFFVK 562
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C + +L+ +M+ + PD + TYNALI G+C +G++++A+
Sbjct: 244 YNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPD-------VNTYNALINGFCIVGKLKDAI 296
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+ M ++PD ++NI++ FC+ E R+ + + + QG
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCK---------------EGRVKEAKNGLAMMMKQG 341
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y+SLM+ Y ++ KA + ++H G + + S+ IN K +A
Sbjct: 342 IKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAM 401
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
++ M TY +LI+ C + +EL RG + +
Sbjct: 402 KLFKEMHHKQIFPNV--ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLK 459
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+P+ Y LI C+ ++ A N++ ++ G+
Sbjct: 460 DQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGY 498
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L +LR + L P+ V YN +I C+ + A++L EM KRI
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRI------------- 272
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D + Y++L+N + G ++ A L ++ + + T ++ ++ K+ R +EAK
Sbjct: 273 -FPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 331
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
L M+ K TY++L++ C NE V++A +TM
Sbjct: 332 NGLAMMMKQGI--KPDVVTYNSLMDRYCLVNE----------------VNKAKSIFNTMS 373
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H + Y+ +I C+ K VD+A ++ M H P++ + +LI
Sbjct: 374 HRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLI 423
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 60/317 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------------------ 54
Y +L+ C+ G+ ++ + D++I G++P+ VT
Sbjct: 175 TYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDI 234
Query: 55 ----GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
G P+LV+YN L+ G C GR E+A+ + + +PE G P VS+NI++ C
Sbjct: 235 IAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRW 294
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
+AYEL MD R + VV Y+ L+ G +E+A+ + E+
Sbjct: 295 DEAYELMAGMD--RDGQAPSVV------------TYNVLITSLSIDGRIEQAFKVLDEMT 340
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEF 230
G+ + + + I L K+ R + L MI+ TY+A+ C
Sbjct: 341 KSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRR--FHLNGGTYNAIALLCE---- 394
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
RG+V EA + + + P Y +I CR N A+ +
Sbjct: 395 ------------RGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYE 442
Query: 291 MVHYGFVPHMFSVLALI 307
M +GF P ++ +LI
Sbjct: 443 MTVHGFTPDSYTYSSLI 459
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 109/281 (38%), Gaps = 43/281 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P + L+Y C G+ +A+ ++ M G+ PDA SY +++ CR G A +L
Sbjct: 101 PEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTFLVNYLCRRGNVGYAMQL 160
Query: 117 KMEMDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMN-DY 153
+M E V Y +L++GL + YS L+ Y
Sbjct: 161 VEKM-EANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAY 219
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA------------KEIL 201
+G E +LD IA G V+ +V + GL K+ RT +A K +
Sbjct: 220 KERGVDEAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCV 278
Query: 202 LS---MISNSCLSKTTHTTYDALIENCSNNEFKSLVE---LVKGFRMRGLVSEAARAHDT 255
+S ++ + C Y+ + + + S+V L+ + G + +A + D
Sbjct: 279 VSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDE 338
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
M K YN +I C+ VD +M++ F
Sbjct: 339 MTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRF 379
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 140/363 (38%), Gaps = 88/363 (24%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
M+ G+ PD +Y+ L N Y +L+ C+ G+
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGK 63
Query: 33 FSKVSNLHDQMIHNGVLPDFVT----------------------------GSPSLVTYNA 64
++ + D++I G++P+ VT G P+LV+YN
Sbjct: 64 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNV 123
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C GR E+A+ + + +PE G P VS+NI++ C +AYEL MD R
Sbjct: 124 LLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMD--R 181
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ VV Y+ L+ G +E+A+ + E+ G+ + + +
Sbjct: 182 DGQAPSVV------------TYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPI 229
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I L K+ R + L MI+ TY+A+ C RG
Sbjct: 230 IARLCKEGRVDLVVQCLDQMINRR--FHLNGGTYNAIALLCE----------------RG 271
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+V EA + + + P Y +I CR N A+ + M +GF P ++
Sbjct: 272 MVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYS 331
Query: 305 ALI 307
+LI
Sbjct: 332 SLI 334
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++PD T++ L ++A C G+ + N+ M+ GV P++V
Sbjct: 254 MVMKNINPDAYTFNIL-------VDALCKEGKIKEAKNVIAVMMKEGV-------EPTVV 299
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ GYC + V +A +L + M ++P++ SYNI+I+GFC+I+ +A L EM
Sbjct: 300 TYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEM 359
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
+ I +V Y SL+ GL +D Y+SL++ +
Sbjct: 360 CCRGIAP-HKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++I G T ++ I+GL K + + A+++
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVF----------------Q 462
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D LI+ + N + + ++ G GL EA M PD Y +I
Sbjct: 463 DLLIKGYNVNAWTYNI-MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHK 521
Query: 279 KNVDKAYNMYTRMVHYGFV 297
+KA + MV G +
Sbjct: 522 DENEKAQKLLREMVIKGLL 540
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 52/318 (16%)
Query: 4 RGLSPDEGTYSSLFNAY---------FSLIN-----AYCLGGEFSKVSNLHDQMIHNGVL 49
+G+ PD T S L N Y FS+ CL G+ ++ HD ++ G
Sbjct: 96 KGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFH 155
Query: 50 PDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
+ VT Y LI G C +G+ AL +LR + ++ + V Y+ +I G C+ +
Sbjct: 156 LNHVT-------YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKL 208
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
AY L EM KRI VV +SSL+ + G + A+ L E+
Sbjct: 209 VTDAYGLYSEMIVKRI--PPTVV------------TFSSLIYGFCIVGKFKDAFRLFNEM 254
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE 229
++ T ++ ++ L K+ + +EAK ++ M+ + T TY+ L++
Sbjct: 255 VMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG--VEPTVVTYNTLMD------ 306
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
G+ + V +A + P+ YN +I C+ K VD+A ++
Sbjct: 307 ---------GYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFH 357
Query: 290 RMVHYGFVPHMFSVLALI 307
M G PH + +LI
Sbjct: 358 EMCCRGIAPHKVTYNSLI 375
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 53/302 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + L+ +MI + P++VT+++LIYG+C +G+ ++A
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMIVKRI-------PPTVVTFSSLIYGFCIVGKFKDAF 248
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--MEMDEKRILRMEEVVYESLM 137
+ M ++PDA ++NI++ C+ GK E K + + K + V Y +LM
Sbjct: 249 RLFNEMVMKNINPDAYTFNILVDALCK---EGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305
Query: 138 QG----------------------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
G + +Y+ ++N + +++A L E+ G
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
VT + I+GL K R A E++ M N+C+ TY++LI+ C N +
Sbjct: 366 PHKVTYNSLIDGLCKAGRIPYAWELVDEM-HNNCIPADI-VTYNSLIDVFCKNQHVDKAI 423
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
LVK + G+ +P+ YN LI C+ + A +++ ++
Sbjct: 424 ALVKKIKEHGI----------------QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK 467
Query: 295 GF 296
G+
Sbjct: 468 GY 469
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 136/327 (41%), Gaps = 47/327 (14%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+WRG++ ++ SLF Y SL+N + D M PD +VT
Sbjct: 199 VWRGMN-EQNIQPSLF-TYNSLLNGLVGSCFIESAERVFDAMKEGRTKPD-------VVT 249
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN +I GYC G+ +A+ ++R M + L PD VSY V+ + L EM+
Sbjct: 250 YNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEME 309
Query: 122 EKR--------------ILRMEEVV-----YESLMQG--LSDEDAYSSLMNDYLAQGDME 160
+K + +M +V+ +E++++ ++ Y++L++ Y G+ +
Sbjct: 310 DKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSD 369
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A L + DG + VT S +NGL K R EA LS +
Sbjct: 370 GALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEA------------LSYFQFCNENG 417
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
++ N F S L+ G G V EA + D M PD YN LI C+C
Sbjct: 418 VVVNAV---FYS--SLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGR 472
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+D A + RM G +++ LI
Sbjct: 473 IDDALALVKRMERDGCEQTVYTFTILI 499
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PDE TYS++ +N C G + + NGV+ + V Y++
Sbjct: 382 GIEPDEVTYSAI-------VNGLCKSGRVEEALSYFQFCNENGVVVN-------AVFYSS 427
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK- 123
LI G GRV+EA + M E G PD+ YN +I G C+ A L M+
Sbjct: 428 LIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDG 487
Query: 124 ----------------RILRMEEVV-YESLM--QGLSDEDA-YSSLMNDYLAQGDMEKAY 163
R+ R EE V LM +G++ A + +L G + +A
Sbjct: 488 CEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARAC 547
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ E+A G + E+ E + I L K R +EA
Sbjct: 548 KVLDELAPMGVVLETAYEDM-IGALCKAGRVKEA 580
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 136/327 (41%), Gaps = 47/327 (14%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+WRG++ ++ SLF Y SL+N + D M PD +VT
Sbjct: 199 VWRGMN-EQNIQPSLF-TYNSLLNGLVGSCFIESAERVFDAMKEGRTKPD-------VVT 249
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN +I GYC G+ +A+ ++R M + L PD VSY V+ + L EM+
Sbjct: 250 YNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEME 309
Query: 122 EKR--------------ILRMEEVV-----YESLMQG--LSDEDAYSSLMNDYLAQGDME 160
+K + +M +V+ +E++++ ++ Y++L++ Y G+ +
Sbjct: 310 DKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSD 369
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A L + DG + VT S +NGL K R EA LS +
Sbjct: 370 GALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEA------------LSYFQFCNENG 417
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
++ N F S L+ G G V EA + D M PD YN LI C+C
Sbjct: 418 VVVNAV---FYS--SLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGR 472
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+D A + RM G +++ LI
Sbjct: 473 IDDALALVKRMERDGCEQTVYTFTILI 499
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PDE TYS++ +N C G + + NGV+ + V Y++
Sbjct: 382 GIEPDEVTYSAI-------VNGLCKSGRVEEALSYFQFCNENGVVVN-------AVFYSS 427
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK- 123
LI G GRV+EA + M E G PD+ YN +I G C+ A L M+
Sbjct: 428 LIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDG 487
Query: 124 ----------------RILRMEEVV-YESLM--QGLSDEDA-YSSLMNDYLAQGDMEKAY 163
R+ R EE V LM +G++ A + +L G + +A
Sbjct: 488 CEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARAC 547
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ E+A G + E+ E + I L K R +EA
Sbjct: 548 KVLDELAPMGVVLETAYEDM-IGALCKAGRVKEA 580
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 147/348 (42%), Gaps = 75/348 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
+L RGL P+ TY+ L + +F ++IN G+
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGL---GK 546
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+VS D++ +N + FV+ S +TYN++I G+ G V+ AL R M E G+SP
Sbjct: 547 TGRVSETQDKL-NNFIKQGFVSTS---ITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------------ 140
D ++Y +I G C+ + G A E+ +M K ++++ V Y +L+ G
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKG-MKLDVVAYSALIDGFCKMHDMESASKF 661
Query: 141 ----------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+ Y+S+++ ++ +ME A L +E+ + + + I GL K
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLK 721
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ + A ++ M+S + Y LI SNN G + A+
Sbjct: 722 EGKLSLALDLYSEMLSKDIVPDIV--MYTVLINGLSNN---------------GQLENAS 764
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ M N P VYN LI + R N+ +A+ ++ M+ G VP
Sbjct: 765 KILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVP 812
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 114/272 (41%), Gaps = 45/272 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G+SPD TY+SL I+ C + +H M + G+ D +V
Sbjct: 595 MCESGISPDVITYTSL-------IDGLCKSNKIGLALEMHSDMKYKGMKLD-------VV 640
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y+ALI G+C + +E A + ++GL+P+ V YN +ISGF + A L EM
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ ++ D Y+S++ L +G + A L E+ + + V
Sbjct: 701 IKNKV--------------PCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVM 746
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+V INGLS + A +IL M N + T L+ N L+ G
Sbjct: 747 YTVLINGLSNNGQLENASKILKEMDGN-------NITPSVLVYNI----------LIAGN 789
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
G + EA R HD ML PD Y+ L+
Sbjct: 790 FREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 31/253 (12%)
Query: 55 GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
G ++VTYN L+ LG+V EA + M G++P VSYN +I G C+ KAY
Sbjct: 425 GITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAY 484
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ + E R L+ V Y L+ G + +GD E+A+++ ++
Sbjct: 485 SMLKSILE-RGLKPNAVTYTLLIDG-------------FFKKGDSERAFVVFEQMMAANI 530
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
T + INGL K R E ++ L + I +S T TY+++I+
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVS--TSITYNSIID----------- 577
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
GF G V A A+ M PD Y LI C+ + A M++ M +
Sbjct: 578 ----GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYK 633
Query: 295 GFVPHMFSVLALI 307
G + + ALI
Sbjct: 634 GMKLDVVAYSALI 646
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 48/286 (16%)
Query: 31 GEFSKVS---NLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE 87
GE KV+ NL ++M+ G+ +PSLV+YN LI G+C G +++A +L+ + E
Sbjct: 440 GELGKVNEACNLWEKMVSKGI-------TPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492
Query: 88 MGLSPDAVSYNIVISGFCRIREPGKAYELKMEM--------------------DEKRILR 127
GL P+AV+Y ++I GF + + +A+ + +M R+
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552
Query: 128 MEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
++ + + QG +S Y+S+++ + +G ++ A + RE+ G + +T + I+
Sbjct: 553 TQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLID 612
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLV 246
GL K + A E+ M K Y ALI+ GF +
Sbjct: 613 GLCKSNKIGLALEMHSDMKYKGM--KLDVVAYSALID---------------GFCKMHDM 655
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
A++ +L P+ VYN +I N++ A N++ M+
Sbjct: 656 ESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 51/313 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P +GTY+++ I A G F + L D+M+ G LP +++ +
Sbjct: 285 GWVPSKGTYTAV-------IVACVKQGNFVEALRLKDEMVSVG-LP------MNVIVTRS 330
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC LG V AL + + E G+ PD V ++++I+G ++ + KAYEL M +
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM---K 387
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
++ ++ V+ +SL+ + Q +E AY L E G ++ VT ++
Sbjct: 388 LMGIQPNVF-----------IVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNIL 435
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-----ENCSNNEF---KSLVE- 235
+ L + + EA + M+S + +Y+ LI + C + + KS++E
Sbjct: 436 LKWLGELGKVNEACNLWEKMVSKGI--TPSLVSYNNLILGHCKKGCMDKAYSMLKSILER 493
Query: 236 -----------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
L+ GF +G A + M+ N P +N +I + V +
Sbjct: 494 GLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSET 553
Query: 285 YNMYTRMVHYGFV 297
+ + GFV
Sbjct: 554 QDKLNNFIKQGFV 566
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 122/309 (39%), Gaps = 47/309 (15%)
Query: 38 NLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSY 97
L+D+M+ G+ D T + ++ G+ EE + GL DA +Y
Sbjct: 206 QLYDEMVERGIYGD-------CYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAY 258
Query: 98 NIVISGFCRIREPGKAYELKMEMDEKRILRME----EVVYESLMQG-------LSDE--- 143
+I++ CR + A EL EM E + + V+ + QG L DE
Sbjct: 259 SILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318
Query: 144 -------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
SLM Y GD+ A L E+ G + + V SV ING SK +
Sbjct: 319 VGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378
Query: 197 AKEILLSM----------ISNSCLS--------KTTHTTYDALIENCSNNEFKSLVELVK 238
A E+ M I NS L + + +D +E+ N + L+K
Sbjct: 379 AYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNI-LLK 437
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G V+EA + M+ P YN LI+ HC+ +DKAY+M ++ G P
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497
Query: 299 HMFSVLALI 307
+ + LI
Sbjct: 498 NAVTYTLLI 506
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 38/268 (14%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+N L+ + + ++ +A+ R M E L P N +++ R A +L EM
Sbjct: 152 VFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM 211
Query: 121 DEKRIL-----------------RMEEV---VYESLMQGLS-DEDAYSSLMNDYLAQGDM 159
E+ I + EEV E+ +GL D AYS L+ + D+
Sbjct: 212 VERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDL 271
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
A L +E+ G++ T + I K+ EA + M+S T
Sbjct: 272 NLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTR-- 329
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L+KG+ + G V+ A + D ++ G PD +++ LI +
Sbjct: 330 ---------------SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVG 374
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+++KAY +YTRM G P++F V +L+
Sbjct: 375 DMEKAYELYTRMKLMGIQPNVFIVNSLL 402
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 56/327 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+SP Y+SL +A L+ + + +SK QM+ + PD +TYN
Sbjct: 164 GISPTTRLYNSLIDA---LVKSNSIDLAYSKFQ----QMVGDHCFPD-------RITYNV 209
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI+G C +G V+EAL ++R M + GL P+ +Y I+I GFC + +A+ + M E R
Sbjct: 210 LIHGVCKIGVVDEALRLIRQMKDKGLFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESR 269
Query: 125 ILRMEEVVYESLMQGL---SDEDAYSSLMNDY--------------------LAQGDMEK 161
+ E + +L+ G+ D L++++ LA M K
Sbjct: 270 VCANEATI-RTLVHGVFRCVDPSKAFVLLSEFLDREEDFCSGKLACDTVLYCLANNSMAK 328
Query: 162 AYIL-DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
++ R+ GY+ +S +V + L K+A REA EI K TY
Sbjct: 329 EMVVFIRKALARGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGV--KPGIGTYLT 386
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L E +E + E + D M+ + YN LI C+
Sbjct: 387 LAEALYKDEQR---------------DEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSL 431
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+DKA +++ M GF P++ + LI
Sbjct: 432 MDKASEVFSEMQLRGFTPNLVTFNTLI 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 32/231 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y LI+ +C K S + +M G +P+LVT+N LI G+C G + +A
Sbjct: 418 SYNMLIDCFCKVSLMDKASEVFSEMQLRGF-------TPNLVTFNTLINGHCKDGAIIKA 470
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+L + E L PD +++ +I G CR++ +A+E EM E + ++Y L++
Sbjct: 471 RELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGV-NPNAIIYNILIR 529
Query: 139 GL----------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
L D +Y++L+ + +EKA L ++ G+
Sbjct: 530 SLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNP 589
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA--LIENC 225
++ T S FI LS+ R EAK++ SM +N C + +A ++E C
Sbjct: 590 DNYTYSAFIAALSESGRLEEAKKMFYSMEANGCSPDSYDRVEEAQKIVERC 640
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 120/310 (38%), Gaps = 53/310 (17%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCL--GGEFSKVSNLHDQMIHNGVLPDFVTGSPSL 59
L RG PD SS+FN + CL E + + + GV P +
Sbjct: 338 LARGYVPD----SSVFNVIMA-----CLVKRAELREACEIFEIFTKRGV-------KPGI 381
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
TY L + +E I M GL + VSYN++I FC++ KA E+ E
Sbjct: 382 GTYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSE 441
Query: 120 MDEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
M ++G + +++L+N + G + KA L + + +
Sbjct: 442 MQ---------------LRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDI 486
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV 237
T S I+GL + RT EA E M+ Y+ LI + CS E V+L+
Sbjct: 487 FTFSCIIDGLCRLKRTEEAFECFNEMVEWGV--NPNAIIYNILIRSLCSIGETTRSVKLL 544
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+ + G+ PD YN LI CR V+KA ++ M GF
Sbjct: 545 RRMQEEGI----------------SPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFN 588
Query: 298 PHMFSVLALI 307
P ++ A I
Sbjct: 589 PDNYTYSAFI 598
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 138/334 (41%), Gaps = 59/334 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G P+ TY+ L IN +C G+ ++ +M G PD +
Sbjct: 339 MVEKGFEPNVITYTIL-------INGFCKDGKIQDAFQMYGEMSSKGCKPD-------IY 384
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N+LIYG C ++EEALG+ M G+ + ++YN +I F R +AY+L EM
Sbjct: 385 TFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEM 444
Query: 121 DEKRILRMEEVVYESLMQ-----GLSDED----------------------AYSSLMNDY 153
R ++ + Y L++ GL D Y++L++ +
Sbjct: 445 -LFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTITYNTLIHAF 503
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
L +++AY L E+ G+ +++T + I L K + ++ M
Sbjct: 504 LRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSI 563
Query: 214 THTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
N +N F S+ G V++A R M+H PD YN LI
Sbjct: 564 NSC-------NILSNSFCSI----------GKVNDALRFLRDMIHRGLTPDIVTYNSLIN 606
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ + +A N++ R+ G P+ + LI
Sbjct: 607 GLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLI 640
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 41/305 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LIN Y G F + +L + N V+ F P +N +I G C G + AL
Sbjct: 280 YNTLINGYVASGRFEEAKDL---LYQNMVIAGF---EPDAFMFNIMIDGLCKKGYLVSAL 333
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
L M E G P+ ++Y I+I+GFC+ + A+++ EM K + + + SL+ G
Sbjct: 334 EFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGC-KPDIYTFNSLIYG 392
Query: 140 LSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
L D Y++L++ +L +++AY L E+ G+ +
Sbjct: 393 LCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLD 452
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
++T + I L K + N + +T +D +E N + L+
Sbjct: 453 NITYNGLIKALCKTG-----------LCKNDKMEETLGLYHDMFLEGVIANTI-TYNTLI 500
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
F + +A + + ML D YN LI C+ ++K + M G
Sbjct: 501 HAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIF 560
Query: 298 PHMFS 302
P + S
Sbjct: 561 PSINS 565
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 41/285 (14%)
Query: 29 LGGEFSKVS-NLHDQMIHNGVLPDF----VTGSPSLVTYNALIYGYCFLGRVEEALGILR 83
+ G KV+ N+ M+ G+ P + +T+N +I+G C GR+ EA +L
Sbjct: 176 VSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFCMTFNDVIHGLCKAGRIHEAAKLLD 235
Query: 84 GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE 143
M G + DA+ Y ++ G CR+ ++DE R+L + +++
Sbjct: 236 RMLLHGFTTDALIYGCLMPGLCRMG----------QVDEARVLLSKIPNPNTVL------ 279
Query: 144 DAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++L+N Y+A G E+A +L + + G+ ++ ++ I+GL KK A E L
Sbjct: 280 --YNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLN 337
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
M+ + TY LI GF G + +A + + M K
Sbjct: 338 EMVEKG--FEPNVITYTILIN---------------GFCKDGKIQDAFQMYGEMSSKGCK 380
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD +N LI C+ +++A +Y M G + + + LI
Sbjct: 381 PDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLI 425
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML+RG D TY+ L I A C G K L ++M G+ P S+
Sbjct: 519 MLFRGFPLDNITYNGL-------IKALCKTGAIEKGLGLIEEMFGKGIFP-------SIN 564
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N L +C +G+V +AL LR M GL+PD V+YN +I+G C+ +A L +
Sbjct: 565 SCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRL 624
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + V Y +L+ ED L ND A +L + +G++ +T
Sbjct: 625 QTEGMCP-NAVTYNTLISSFCYED----LFND---------ACLLLFKGVSNGFIPNEIT 670
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 671 WSILINCFVKK 681
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI+A+ G + L ++M+ G D +T YN LI C G +E+
Sbjct: 495 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNIT-------YNGLIKALCKTGAIEKG 547
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG++ M G+ P S NI+ + FC I GK D R LR + + +
Sbjct: 548 LGLIEEMFGKGIFPSINSCNILSNSFCSI---GKVN------DALRFLR------DMIHR 592
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
GL+ D Y+SL+N G +++A L + +G +VT + I+ + +A
Sbjct: 593 GLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDA 652
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENC 225
+L +SN + T+ LI NC
Sbjct: 653 CLLLFKGVSNGFIP--NEITWSILI-NC 677
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 140/302 (46%), Gaps = 38/302 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + +SPD TYS+L I+ +C+ G+ + L ++M + PD +
Sbjct: 76 MVAKRISPDVITYSAL-------ISGFCIVGKLNDTIGLFNKMTAENINPD-------VY 121
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N + +C GRV+EA +L M + G+ P V+YN +++G+C ++E A ++ M
Sbjct: 122 TFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTM 181
Query: 121 DEKRILRM-EEVV--YESL--MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
++ +++M +E + YE + + + D YSSL++ +G + I+ DG
Sbjct: 182 NQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRG--QPPDIITYNSILDGIR 239
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+ T ++FI GL + + ++A+++ ++ L+ N + +
Sbjct: 240 PDMYTYTIFIKGLCQSGKLKDARKV-----------------FEDLLVKGYNLDVYTYTV 282
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+++GF +GL EA M PD +Y +I+ D A + M+ G
Sbjct: 283 MIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARG 342
Query: 296 FV 297
+
Sbjct: 343 LL 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
G C +G+ AL +LR + + P+ + Y+ +I G C+ + A++L EM KRI
Sbjct: 24 GSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRI-- 81
Query: 128 MEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
D YS+L++ + G + L ++ + + T ++ ++
Sbjct: 82 ------------SPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDA 129
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLV 246
K+ R +EAK +L M+ + K + TY+ L+ C E ++ G+V
Sbjct: 130 FCKEGRVKEAKYVLSMMMKHGI--KPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVV 187
Query: 247 S---EAARAHDTMLHGNHKPDGGVYNFLI 272
EA ++ M + PD Y+ L+
Sbjct: 188 KMIDEAINLYEEMHCRKNIPDVVTYSSLV 216
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 141/309 (45%), Gaps = 49/309 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G P+ T+++L I CL G + N HD+++ G D V
Sbjct: 131 ILKKGFDPNAITFNTL-------IKGLCLKGHIHQALNFHDKVVAQGFHLD-------QV 176
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +GR+ AL +L+ + + P+AV YN++I C+ + A++L +M
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
KRI D+ +SL+ + G +++A L ++ + T
Sbjct: 237 VAKRI--------------SPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYT 282
Query: 181 ESVFINGLSKKARTREAKEIL-LSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
S+ ++ K+ + +EAK +L ++M + L TY++L++ C E ++
Sbjct: 283 FSILVDAFCKEGKVKEAKMMLGVTMKKDIILDV---VTYNSLMDGYCLVKEINKAKDIFD 339
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
RG+++ +++ TM++G C+ K VD+A N++ M +P
Sbjct: 340 SMASRGVIAN-VQSYTTMING---------------LCKIKMVDEAVNLFEEMRCRKIIP 383
Query: 299 HMFSVLALI 307
++ + +LI
Sbjct: 384 NVVTYNSLI 392
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C + +L+ QM+ + SP T N+LIYG+C +G+++EA+
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRI-------SPDDFTCNSLIYGFCIMGQLKEAV 265
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM--DEKRILRMEEVVYESLM 137
G+L M ++P +++I++ FC+ GK E KM + K+ + ++ V Y SLM
Sbjct: 266 GLLHKMILENINPRMYTFSILVDAFCK---EGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G Y ++ KA + +A G ++ + + INGL K EA
Sbjct: 323 DG-------------YCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ M + TY++LI+ G G +S + D M
Sbjct: 370 VNLFEEMRCRKIIPNVV--TYNSLID---------------GLGKLGKISCVLKLVDEMH 412
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN ++ C+ +VDKA + T + G P M++ LI
Sbjct: 413 DRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 114/279 (40%), Gaps = 38/279 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y SL++ YCL E +K ++ D M GV+ + + +Y +I G C + V+EA
Sbjct: 317 TYNSLMDGYCLVKEINKAKDIFDSMASRGVIAN-------VQSYTTMINGLCKIKMVDEA 369
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + M + P+ V+YN +I G ++ + +L EM ++ + ++
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG--QPPNII------ 421
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
Y+S+++ ++KA L + G + T +V I GL + + +A+
Sbjct: 422 ------TYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQ 475
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++ ++ L+ N + + +++GF ++GL A M
Sbjct: 476 KV-----------------FEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMED 518
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
P+ Y +I+ D A + M+ G +
Sbjct: 519 NGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R + P+ TY+SL + L G+ S V L D+M G P+++
Sbjct: 376 MRCRKIIPNVVTYNSLIDGLGKL-------GKISCVLKLVDEMHDRG-------QPPNII 421
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+++ C V++A+ +L + + G+ PD +Y ++I G C + GK +
Sbjct: 422 TYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC---QSGKLED----- 473
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
++V + L++G + D Y+ ++ + +G + A L ++ +G + +
Sbjct: 474 -------AQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T + I L +K A+++L MI+ L
Sbjct: 527 TYEIVILSLFEKDENDMAEKLLREMIARGLL 557
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 47/296 (15%)
Query: 34 SKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
S +LH QM NG++ DF T +N LI + LG + + + + G P+
Sbjct: 87 STALSLHQQMELNGIVSDFFT-------FNILINCFSQLGLNSLSFSVFGKILKKGFDPN 139
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMND 152
A+++N +I G C +A ++VV QG D+ +Y +L+N
Sbjct: 140 AITFNTLIKGLCLKGHIHQALNFH-----------DKVV----AQGFHLDQVSYGTLING 184
Query: 153 YLAQGDMEKAYILDREIAHDGYLSE--SVTESVFINGLSKKARTREAKEILLSMISN--- 207
G + A L + + DG L + +V ++ I+ + K +A ++ M++
Sbjct: 185 LCKVGRITAALQLLKRV--DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS 242
Query: 208 ----SC------------LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAAR 251
+C L + + ++EN N + LV F G V EA
Sbjct: 243 PDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENI-NPRMYTFSILVDAFCKEGKVKEAKM 301
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + D YN L+ +C K ++KA +++ M G + ++ S +I
Sbjct: 302 MLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 30/210 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG +P+ T++ L IN +C G K + ++ N + PD +
Sbjct: 1 MQLRGFTPNLVTFNIL-------INGHCKDGAIIKAREPLEMLLENRLKPD-------IF 46
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T++ +I G C L R EEA M E G++P+A+ YNI+I C I E ++ +L
Sbjct: 47 TFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKL---- 102
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ RM+E +G+S D +Y++L+ + +EKA L ++ G+ ++
Sbjct: 103 ----LRRMQE-------EGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNY 151
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSC 209
T S FI LS+ R EAK++ S+ +N C
Sbjct: 152 TYSAFIAALSESGRLEEAKKMFYSIEANGC 181
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F Y LI+ +C GE + D+M G++P +++ +++YG C V+
Sbjct: 154 FYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP-------CVLSTTSILYGCCQANNVD 206
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
EA + M E PD +S N+V++GFC++ R+EE +
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMG------------------RLEEALSFVW 248
Query: 137 M---QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
M G S + ++Y+SL+N + +A+ ++ +G + + V ++ I GLSK+
Sbjct: 249 MIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEG 308
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSN----NEFKSL------------VEL 236
R EA ++L M + L+ ++ Y+A+I+ + N +SL L
Sbjct: 309 RVGEAAKMLEEM-TQIGLTPDSY-CYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTIL 366
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ RG+V+EA + M +P +N LI C+ KN++KA N++ ++
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKL 421
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 34/281 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
N+Y SLINA+ + + + +M G++PD +V Y +I G GRV E
Sbjct: 260 NSYASLINAFFKARRYREAHACYTKMFKEGIVPD-------VVLYAIMIRGLSKEGRVGE 312
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A +L M ++GL+PD+ YN VI G C + +A L +E+ E + ++ E
Sbjct: 313 AAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCK 372
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+G+ E L N MEK G VT + INGL K +A
Sbjct: 373 RGMVAEA--QELFN------QMEKL----------GCEPSVVTFNTLINGLCKAKNLEKA 414
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD--T 255
K + + H+ + +L + + + L+K + + RA+ T
Sbjct: 415 KNLFCKLEVGR-----RHSLHLSLSQ--GSGQVSDSARLLKKAKEMCEAGQILRAYKLIT 467
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
L G KPD YN L+ C + V+ AYN + + G+
Sbjct: 468 DLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY 508
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L+NA C+ E + N + + G SP VTY +I G + R +EA
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGY------PSPDNVTYGTIIKGLFMVDREDEA 532
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME-------MDEKRILRMEEV 131
+ + M + G P Y +++ CR + +A+ L +E D I +E+
Sbjct: 533 FKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKY 592
Query: 132 VY----ESLMQGLSDED---------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
++ E +++GL + D Y+ L+ + G + +A I+ + + + +
Sbjct: 593 LFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALII-LSVLDEFNIKIN 651
Query: 179 VTESV-FINGLSKKARTREAKEILL 202
T V I GL K+ R +A +I L
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFL 676
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F Y LI+ +C GE + D+M G++P +++ +++YG C V+
Sbjct: 154 FYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP-------CVLSTTSILYGCCQANNVD 206
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
EA + M E PD +S N+V++GFC++ R+EE +
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMG------------------RLEEALSFVW 248
Query: 137 M---QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
M G S + ++Y+SL+N + +A+ ++ +G + + V ++ I GLSK+
Sbjct: 249 MIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEG 308
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSN----NEFKSL------------VEL 236
R EA ++L M + L+ ++ Y+A+I+ + N +SL L
Sbjct: 309 RVGEAAKMLEEM-TQIGLTPDSY-CYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTIL 366
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ RG+V+EA + M +P +N LI C+ KN++KA N++ ++
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKL 421
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 34/281 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
N+Y SLINA+ + + + +M G++PD +V Y +I G GRV E
Sbjct: 260 NSYASLINAFFKARRYREAHACYTKMFKEGIVPD-------VVLYAIMIRGLSKEGRVGE 312
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A +L M ++GL+PD+ YN VI G C + +A L +E+ E + ++ E
Sbjct: 313 AAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCK 372
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+G+ E L N MEK G VT + INGL K +A
Sbjct: 373 RGMVAEA--QELFN------QMEKL----------GCEPSVVTFNTLINGLCKAKNLEKA 414
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD--T 255
K + + H+ + +L + + + L+K + + RA+ T
Sbjct: 415 KNLFCKLEVGR-----RHSLHLSLSQ--GSGQVSDSARLLKKAKEMCEAGQILRAYKLIT 467
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
L G KPD YN L+ C + V+ AYN + + G+
Sbjct: 468 DLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY 508
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L+NA C+ E + N + + G SP VTY +I G + R +EA
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGY------PSPDNVTYGTIIKGLFMVDREDEA 532
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME-------MDEKRILRMEEV 131
+ + M + G P Y +++ CR + +A+ L +E D I +E+
Sbjct: 533 FKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKY 592
Query: 132 VY----ESLMQGLSDED---------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
++ E +++GL + D Y+ L+ + G + +A I+ + + + +
Sbjct: 593 LFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALII-LSVLDEFNIKIN 651
Query: 179 VTESV-FINGLSKKARTREAKEILL 202
T V I GL K+ R +A +I L
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFL 676
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 51/328 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ PD +Y + + YC G + M+ G + D T
Sbjct: 154 MCVRGVQPDSVSYRVM-------VVMYCKIGNILEADRWLSAMLERGFVVDNAT------ 200
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ +I +C G AL R + +MGL P+ +++ +I G C+ +A+E+
Sbjct: 201 -FTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEM---- 255
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESV 179
+EE+V + + ++SL++ +G EKA+ + + + + + +
Sbjct: 256 -------LEEMVGKGWKPNVY---THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 305
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVEL-- 236
T + I+G ++ + A E+LLS + L T+T Y LI+ +C F+ +L
Sbjct: 306 TYTAMISGYCREDKLNRA-EMLLSRMKEQGLVPNTNT-YTTLIDGHCKAGNFERAYDLMN 363
Query: 237 -----------------VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
V G RG V EA + + KPD YN L+ EHC+
Sbjct: 364 LMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQA 423
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N+ +A ++ +MV G P + S LI
Sbjct: 424 NIRQALVLFNKMVKSGIQPDIHSYTTLI 451
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+GL P+ TY++L I+ +C G F + +L + M G SP++ TYN
Sbjct: 333 QGLVPNTNTYTTL-------IDGHCKAGNFERAYDLMNLMSSEGF-------SPNVCTYN 378
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM--- 120
A++ G C GRV+EA +L + GL PD +YNI++S C+ +A L +M
Sbjct: 379 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKS 438
Query: 121 -----------------DEKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKA 162
E R+ E E++ G+ + Y+S++ Y +G++ A
Sbjct: 439 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCREGNLTLA 498
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
++ G +S+T I+GL K+++ EA+ + SMI
Sbjct: 499 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSMI 541
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y ++I+ YC + ++ L +M G++P+ TY LI G+C G E A
Sbjct: 306 TYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN-------TNTYTTLIDGHCKAGNFERA 358
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ M G SP+ +YN +++G C+ +AY++ + +
Sbjct: 359 YDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKM---------------LEDGFQN 403
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
GL D Y+ LM+++ Q ++ +A +L ++ G + + + I ++ R +E+
Sbjct: 404 GLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKES 463
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ + + T+ TY ++I C +L +K F H
Sbjct: 464 EMFFEEAVRIGIIP--TNRTYTSMI--CGYCREGNLTLAMKFF------------HRLSD 507
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
HG PD Y +I C+ +D+A +Y M+ G VP
Sbjct: 508 HGC-APDSITYGAIISGLCKQSKLDEARGLYDSMIEKGLVP 547
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ PD ++Y +LI +C + ++ + G++P +
Sbjct: 435 MVKSGIQPD-------IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP-------TNR 480
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++I GYC G + A+ + + G +PD+++Y +ISG C+ + +A L M
Sbjct: 481 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSM 540
Query: 121 DEKRILRME 129
EK ++ E
Sbjct: 541 IEKGLVPCE 549
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 33/252 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VTYN LIYG+C +G++++A+ +L M +SP+ V++N ++ G C+ E KA
Sbjct: 97 PNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKA--- 153
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+V+ + QG+ + YS LM+ Y ++ KA + + G
Sbjct: 154 ------------RKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVT 201
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
S + +V INGL K EA + M + TY++LI+
Sbjct: 202 SNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDI--VTYNSLID------------ 247
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G G +S+A + M + D YN L+ C+ VD A ++T++ G
Sbjct: 248 ---GLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQG 304
Query: 296 FVPHMFSVLALI 307
P++++ L+
Sbjct: 305 IQPYIYTYTILV 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 28 CLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE 87
CL G+ + HD +I +F V+Y LI G C G A+ +LR +
Sbjct: 5 CLNGKVKEALYFHDDVIA----KEFQLNQ---VSYGTLIDGLCKAGETRAAMQVLRNIDG 57
Query: 88 MGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS 147
+ + P+ V Y+ +I C+ + A++L EM RI V Y +L+ G
Sbjct: 58 LLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFP-NVVTYNTLIYG-------- 108
Query: 148 SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
+ G M++A L E+ VT + ++GL K+ ++A+++L MI
Sbjct: 109 -----FCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQ 163
Query: 208 SCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV 267
+ TY L++ G+ + V++A +TM+ +
Sbjct: 164 GV--ELNVVTYSFLMD---------------GYFLVKEVNKATFVFNTMVRRGVTSNVHS 206
Query: 268 YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
Y +I C+ K VD+A N++ M P + + +LI
Sbjct: 207 YTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLI 246
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG++ + +Y+ + IN C + NL +M + PD +V
Sbjct: 195 MVRRGVTSNVHSYTVM-------INGLCKNKMVDEAVNLFKEMHLKNMAPD-------IV 240
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G GR+ +A ++ M G D ++YN ++ C+ + A L ++
Sbjct: 241 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKI 300
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ I + +Y Y+ L++ G ++ A + + + GY +
Sbjct: 301 KDQGI---QPYIY-----------TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRM 346
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSLVELVK 238
+V INGL K++ +A +L M N C T AL EN N++ VEL++
Sbjct: 347 YTVMINGLCKESLFDKALSLLSKMKDNGCTPNPVTFEILIRALFENDMNDK---AVELLR 403
Query: 239 GFRMRGLV 246
+R L+
Sbjct: 404 KMIVRDLL 411
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 53/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G +P TY+S+ N Y + G +S+V+ + D M NGV+PD L TYN
Sbjct: 271 GCTPTLVTYNSILNVYGKM------GMSWSRVTAIFDSMKTNGVVPD-------LYTYNT 317
Query: 65 LIYGYCFLGRV-EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI C G + EE + + + G PD V+YN ++ F + R P +A ++ +M+
Sbjct: 318 LI-TCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMES- 375
Query: 124 RILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
G S Y+SL++ ++ G +E+A L ++ G + T +
Sbjct: 376 --------------NGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYT 421
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN----EFKSLVELVK 238
++G K + A E+ M + C K T++ALI+ N E + E +K
Sbjct: 422 TLLSGFEKAGKDEFAFEVYDEMKAAGC--KPNICTFNALIKMHGNRGMFVEMMKVFEEIK 479
Query: 239 G----------------FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
F + SE A M P+ +N LI + RC + D
Sbjct: 480 ECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFD 539
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
+A +Y M+ G P + + A++
Sbjct: 540 QAMAVYKSMLESGVSPDLSTYNAVL 564
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 62/324 (19%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G SPD T+++L + + S+V+ + +M +G +P+ T+N
Sbjct: 482 GCSPDIVTWNTL-------LAVFGHNQMDSEVAGVFKEMKRSGFVPE-------RDTFNT 527
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI Y G ++A+ + + M E G+SPD +YN V++ R ++ ++ EM + R
Sbjct: 528 LISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGR 587
Query: 125 ILRMEEVVYESLMQGLSD-----------EDAYSSLMNDYL----------AQGDM---- 159
R E+ Y SL+ ++ E+ YS + + ++ D+
Sbjct: 588 C-RPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKTLVLVSSKSDLLMET 646
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
E+A+ E+ G T + I+ +K +A EIL M N + TTY+
Sbjct: 647 ERAFF---ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTP--SLTTYN 701
Query: 220 ALIENCS-NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+L+ S +++F+ E+++ +G+ KPD YN +I +CR
Sbjct: 702 SLMYMYSRSDKFQKSEEILREVLKKGM----------------KPDKVSYNTVIYAYCRN 745
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFS 302
+ +A M++ M VP++ +
Sbjct: 746 GRMKEALRMFSEMKDSALVPNVVT 769
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG++P T +++ I+ Y SK + + + M NG +PSL TYN
Sbjct: 656 RGITPGLTTLNAM-------ISIYGRKQVVSKANEILNFMYENGF-------TPSLTTYN 701
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+Y Y + +++ ILR + + G+ PD VSYN VI +CR +A + EM +
Sbjct: 702 SLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDS 761
Query: 124 RIL 126
++
Sbjct: 762 ALV 764
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 53/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G +P TY+S+ N Y + G +S+V+ + D M NGV+PD L TYN
Sbjct: 271 GCTPTLVTYNSILNVYGKM------GMSWSRVTAIFDSMKTNGVVPD-------LYTYNT 317
Query: 65 LIYGYCFLGRV-EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI C G + EE + + + G PD V+YN ++ F + R P +A ++ +M+
Sbjct: 318 LI-TCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMES- 375
Query: 124 RILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
G S Y+SL++ ++ G +E+A L ++ G + T +
Sbjct: 376 --------------NGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYT 421
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN----EFKSLVELVK 238
++G K + A E+ M + C K T++ALI+ N E + E +K
Sbjct: 422 TLLSGFEKAGKDEFAFEVYDEMKAAGC--KPNICTFNALIKMHGNRGMFVEMMKVFEEIK 479
Query: 239 G----------------FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
F + SE A M P+ +N LI + RC + D
Sbjct: 480 ECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFD 539
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
+A +Y M+ G P + + A++
Sbjct: 540 QAMAVYKSMLESGVSPDLSTYNAVL 564
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 62/324 (19%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G SPD T+++L + + S+V+ + +M +G +P+ T+N
Sbjct: 482 GCSPDIVTWNTL-------LAVFGHNQMDSEVAGVFKEMKRSGFVPE-------RDTFNT 527
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI Y G ++A+ + + M E G+SPD +YN V++ R ++ ++ EM + R
Sbjct: 528 LISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGR 587
Query: 125 ILRMEEVVYESLMQGLSD-----------EDAYSSLMNDYL----------AQGDM---- 159
R E+ Y SL+ ++ E+ YS + + ++ D+
Sbjct: 588 C-RPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKTLVLVSSKSDLLMET 646
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
E+A+ E+ G T + I+ +K +A EIL M N + TTY+
Sbjct: 647 ERAFF---ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTP--SLTTYN 701
Query: 220 ALIENCS-NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+L+ S +++F+ E+++ +G+ KPD YN +I +CR
Sbjct: 702 SLMYMYSRSDKFQKSEEILREVLKKGM----------------KPDKVSYNTVIYAYCRN 745
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFS 302
+ +A M++ M VP++ +
Sbjct: 746 GRMKEALRMFSEMKDSALVPNVVT 769
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG++P T +++ I+ Y SK + + + M NG +PSL TYN
Sbjct: 656 RGITPGLTTLNAM-------ISIYGRKQVVSKANEILNFMYENGF-------TPSLTTYN 701
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+Y Y + +++ ILR + + G+ PD VSYN VI +CR +A + EM +
Sbjct: 702 SLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDS 761
Query: 124 RIL 126
++
Sbjct: 762 ALV 764
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ P+ T+S L ++A C + + NL M+ GV P++V
Sbjct: 173 MIAKGIFPNVYTFSIL-------VDALCKDRKGKQAMNLLAMMMKKGV-------KPNVV 218
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY A++ GYC + +V +AL I M + G+ P+ YNI+I+G C+ + +A L EM
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278
Query: 121 DEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGD 158
K+I + V Y L+ GL D Y+SL++
Sbjct: 279 HWKKI-NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHH 337
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+++A L +EI G T + I+GL K R +A I +++ T TY
Sbjct: 338 LDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG--YHITVWTY 395
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ +I C F + L+ + +A +++T+++
Sbjct: 396 NVMINGLCKKGLFDEALALLSRMEDNACIPDAV-SYETIIYA 436
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+N YC G + + ++ +++ G P+ +T+ LI G C G+ EAL
Sbjct: 51 LMNCYCHTGGITFLFSILTKILKMGY-------EPNSITFTTLIKGMCLNGQAYEALLFH 103
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ G D VSY I+++G C++ E A M+M K + + V+Y +++
Sbjct: 104 DHVVAHGFKLDQVSYAILMNGLCKMGETRAA----MQMLRKTWVNADVVMYSTII----- 154
Query: 143 EDAYSSLMNDYLAQGD-MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D L +G + AY L E+ G T S+ ++ L K + ++A +L
Sbjct: 155 ---------DSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL 205
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M+ K TY A+++ G+ + V++A + M+
Sbjct: 206 AMMMKKGV--KPNVVTYGAIMD---------------GYCLVNQVNKALNIFNVMVQEGV 248
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+P+ YN +I C+ K VD+A N++ M
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 127/329 (38%), Gaps = 57/329 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P+ T+++L I CL G+ + HD ++ +G D V
Sbjct: 71 ILKMGYEPNSITFTTL-------IKGMCLNGQAYEALLFHDHVVAHGFKLD-------QV 116
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y L+ G C +G A+ +LR + ++ D V Y+ +I C+ + AY L EM
Sbjct: 117 SYAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEM 173
Query: 121 DEKRI---LRMEEVVYESLMQGLSDEDA------------------YSSLMNDYLAQGDM 159
K I + ++ ++L + + A Y ++M+ Y +
Sbjct: 174 IAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQV 233
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
KA + + +G ++ INGL KK R EA + M TY+
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV--TYN 291
Query: 220 ALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
LI+ C + + +ELV R G D YN L+ C+
Sbjct: 292 ILIDGLCKLGKISTSLELVDEMRSIG----------------KTVDIITYNSLLHALCKN 335
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++D+A + + G P++ + LI
Sbjct: 336 HHLDQAITLVKEIKDQGIQPNVCTYTTLI 364
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 33/247 (13%)
Query: 27 YCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMP 86
+C G+ + N+ M+ G P++VTY++L+ GYC + V +A I M
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGF-------KPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 53
Query: 87 EMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------ 140
+ G++PD SYNI+I+GFC+I+ A L EM ++I+ V Y SL+ GL
Sbjct: 54 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIP-NVVTYNSLIDGLCKSGKI 112
Query: 141 ----------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
D YSSL++ +KA L ++ G T ++
Sbjct: 113 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTIL 172
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR 243
INGL K R +A+ I ++ TY +I C+N F + ++
Sbjct: 173 INGLCKGGRPEDAQNIFEDLLVKG--YNINVNTYTVMIHVFCNNGMFGEALAMLSKMEEN 230
Query: 244 GLVSEAA 250
G + A
Sbjct: 231 GCIPNAV 237
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G++PD +Y LIN +C NL ++M ++P+ +V
Sbjct: 52 MAQGGVNPD-------IQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPN-------VV 97
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G C G++ AL ++ M + G PD ++Y+ ++ C+ KA L ++
Sbjct: 98 TYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKL 157
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
++ L+ Y L+ GL EDA Y+ +++ + G
Sbjct: 158 KDQG-LQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGM 216
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
+A + ++ +G + +VT + I L K +A+++LL MI+ L
Sbjct: 217 FGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 268
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 47/295 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F Y LI+ +C GE + D+M G++P +++ +++YG C V+
Sbjct: 154 FYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP-------CVLSTTSILYGCCQANNVD 206
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
EA + M E PD +S N+V++GFC++ R+EE +
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMG------------------RLEEALSFVW 248
Query: 137 M---QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
M G S + ++YSSL+N + +A+ ++ G + + V ++ I GLSK+
Sbjct: 249 MIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEG 308
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSN----NEFKSL------------VEL 236
R EA ++L M + L+ + Y+A+I+ + N +SL L
Sbjct: 309 RVGEAAKMLEEM-TQIGLTPDAY-CYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTIL 366
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ RG+V+EA + M +P +N LI C+ N++KA N++ ++
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKL 421
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G S + +YSSL NA+F + + + +M G++PD +V Y
Sbjct: 254 GFSLNRNSYSSLINAFFK-------ARRYREAHAWYTKMFKQGIVPD-------VVLYAI 299
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I G GRV EA +L M ++GL+PDA YN VI G C + +A L++E+ E
Sbjct: 300 MIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHN 359
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ ++ E +G+ E L N MEK G VT +
Sbjct: 360 VCTHTILICEMCKRGMVAEA--QELFN------QMEKL----------GCEPSVVTFNTL 401
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
INGL K +AK + + H+ + +L + + + L+K +
Sbjct: 402 INGLCKANNLEKAKNLFCKLEVGR-----RHSLHLSLSQ--GSGQVSDSARLLKKAKEMC 454
Query: 245 LVSEAARAHD--TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ RA+ T L G KPD YN L+ C + V+ AYN + + G+
Sbjct: 455 EAGQILRAYKLITDLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY 508
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ PD TY+ L +NA C+ E + N + + G SP VTY +
Sbjct: 473 VKPDIITYNIL-------LNALCMDREVNAAYNFFEFLQKKGY------PSPDNVTYGTI 519
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME------ 119
I G + R +EA + + M + G P Y +++ CR + +A+ L E
Sbjct: 520 IKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLP 579
Query: 120 -MDEKRILRMEEVVY----ESLMQGLSDED---------AYSSLMNDYLAQGDMEKAYIL 165
D I +E+ ++ E +++GL + D Y+ L+ + G + +A I+
Sbjct: 580 SRDNDSISALEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALII 639
Query: 166 DREIAHDGYLSESVTESV-FINGLSKKARTREAKEILL 202
+ + + + T V I GL K+ R +A +I L
Sbjct: 640 -LSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFL 676
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 44/291 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ +MI T SP++VT+++LIYG+C +G+ ++A
Sbjct: 197 YNTIIDSLCKEKLVTEAYELYSEMITK-------TISPTVVTFSSLIYGFCIVGQFKDAF 249
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M ++P+ ++NI++ C+ E KM+ + K +L M + QG
Sbjct: 250 RLFNEMVLKNINPNVYTFNILVDALCK--------EGKMK-EAKNVLAM------MVKQG 294
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D ++SLM+ Y ++ KA L + G + SV INGL K EA
Sbjct: 295 VKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAM 354
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M S + T TY +LI+ G G +S A D M H
Sbjct: 355 DFFKEMQSKKIIPNT--VTYSSLID---------------GLCKSGRISHAWELLDEM-H 396
Query: 259 GNHKPDGGVYNFLIVEHCRCKN--VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+P V F + H CKN VDKA + ++ P+M++ LI
Sbjct: 397 DRGQP-ANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILI 446
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++L I CL G+ + + HD +I G D V
Sbjct: 115 ILKVGFHPDIVTLTTL-------IKGMCLNGKVKEALHFHDHVISLGFHLD-------QV 160
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G AL +LR + ++ D V YN +I C+ + +AYEL EM
Sbjct: 161 SYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSEM 220
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I VV +SSL+ + G + A+ L E+ T
Sbjct: 221 ITKTI--SPTVV------------TFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYT 266
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSK-TTHTTYDALIENCSNNEFKSLVELVKG 239
++ ++ L K+ + +EAK +L M+ THT+ L+ G
Sbjct: 267 FNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTS------------------LMDG 308
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +TM+ P+ Y+ +I C+ K +D+A + + M +P+
Sbjct: 309 YCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPN 368
Query: 300 MFSVLALI 307
+ +LI
Sbjct: 369 TVTYSSLI 376
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 47/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + +SP T+SSL I +C+ G+F L ++M+ + +P++
Sbjct: 220 MITKTISPTVVTFSSL-------IYGFCIVGQFKDAFRLFNEMVLKNI-------NPNVY 265
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N L+ C G+++EA +L M + G+ PD V++ ++ G+C + E KA L M
Sbjct: 266 TFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTM 325
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + + + YS ++N +++A +E+ + +VT
Sbjct: 326 VQRGV--------------MPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVT 371
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
S I+GL K R A E+L M T+ +L+ C N +ELVK
Sbjct: 372 YSSLIDGLCKSGRISHAWELLDEMHDRG--QPANVITFSSLLHALCKNRHVDKAIELVKK 429
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ R + +P+ YN LI C+ + A ++ + G+
Sbjct: 430 LKDRDI----------------QPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGY 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 135/321 (42%), Gaps = 58/321 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++P+ T++ L ++A C G+ + N+ M+ GV PD +V
Sbjct: 255 MVLKNINPNVYTFNIL-------VDALCKEGKMKEAKNVLAMMVKQGVKPD-------IV 300
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ +L+ GYC + V +A + M + G+ P+ Y++VI+G C+ + +A + EM
Sbjct: 301 THTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEM 360
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K+I+ V Y SL+ GL ++ +SSL++
Sbjct: 361 QSKKIIP-NTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRH 419
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L +++ T ++ I+GL K+ R ++A+ I + T TY
Sbjct: 420 VDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKG--YNLTVWTY 477
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ +I G + GL+ EA M P+ F I+ H
Sbjct: 478 NIMIN---------------GLCLEGLLDEALALLSKMEDNGCIPNA--VTFEIIVHALF 520
Query: 279 KN--VDKAYNMYTRMVHYGFV 297
KN +KA + M+ G +
Sbjct: 521 KNDENEKAEKLLREMIARGLL 541
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 118/282 (41%), Gaps = 54/282 (19%)
Query: 56 SPSLVTYNALIYGYCFLGRVEE--------ALGILRGMPEMGLSPDAVSYNIVISGFCRI 107
+PS++ +N + LG + + A+ + + G++P V++NIVI+ +C +
Sbjct: 49 TPSIIEFNKI------LGSLVKSNNKHYPTAISLFYQLELNGITPSIVTFNIVINCYCHL 102
Query: 108 REPGKAYELKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY 163
E A+ L +IL++ + V +L++G+ G +++A
Sbjct: 103 SEMNFAFSLL-----GKILKVGFHPDIVTLTTLIKGMC-------------LNGKVKEAL 144
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL---------------SMISNS 208
+ G+ + V+ INGL K TR A ++L ++I +
Sbjct: 145 HFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSL 204
Query: 209 CLSKTTHTTYDALIENCSNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C K Y+ E + ++V L+ GF + G +A R + M+ N P+
Sbjct: 205 CKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNV 264
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+N L+ C+ + +A N+ MV G P + + +L+
Sbjct: 265 YTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLM 306
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 26/240 (10%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + L+ +MI + SP++VT N+LIYGYC +G+ +EA
Sbjct: 205 YSTIIDGLCKDKLVNDAYELYSEMITKRI-------SPTVVTLNSLIYGYCIVGQFKEAF 257
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--MEMDEKRILRMEEVVYESLM 137
G+LR M ++PD ++NI++ C+ GK E K + + K + + V Y SLM
Sbjct: 258 GLLREMVLKNINPDVYTFNILVDALCK---EGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 314
Query: 138 QG-----------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
G + +YS ++N + ++KA L E+ ++VT + I+
Sbjct: 315 DGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLID 374
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL 245
GL K R A E++ M + TY++LI+ C N+ + LVK + +G+
Sbjct: 375 GLCKSGRISYAWELVDEMRDSG--QPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGI 432
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAY----------------FSL-INAYCLGGEFSKVSNLHDQM 43
M+ G+ PD TYSSL + Y +S+ IN +C K +L +M
Sbjct: 298 MMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEM 357
Query: 44 IHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISG 103
+ PD VTYN+LI G C GR+ A ++ M + G D ++YN +I
Sbjct: 358 RCRRIAPD-------TVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDA 410
Query: 104 FCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY 163
C+ KA L ++ ++ I +++ Y L+ GL QG ++ A
Sbjct: 411 LCKNHHVDKAIALVKKIKDQGI-QLDMYTYNILIDGLC-------------KQGRLKDAQ 456
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDAL 221
++ +++ GY T ++ INGL + EA+ +L M N C+ + T T AL
Sbjct: 457 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 516
Query: 222 IENCSNNEFKSLVE 235
EN N + L+
Sbjct: 517 FENDKNERAEKLLR 530
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L+ +CL + + + HD ++ G + V+Y LI G C +G AL +
Sbjct: 137 TLVKGFCLNHKVKEALHFHDHVLALGF-------HFNQVSYGTLINGLCKIGETRAALQM 189
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + +S D V Y+ +I G C+ + AYEL EM KRI V SL+ G
Sbjct: 190 LRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRI-SPTVVTLNSLIYG-- 246
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y G ++A+ L RE+ + T ++ ++ L K+ + +EAK +
Sbjct: 247 -----------YCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGI 295
Query: 202 LSMISNSCLSKTTHTTYDALIEN-----------CSNNEFKSLVELVKGFRMRGLVSEAA 250
M+ + TY +L++ N S+V + GF +V +A
Sbjct: 296 AVMMKEGVMPDV--VTYSSLMDGYCLYIISRMRVAPNARSYSIV--INGFCKIKMVDKAL 351
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
M PD YN LI C+ + A+ + M G
Sbjct: 352 SLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 396
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R ++PD TY+SL I+ C G S L D+M +G D ++
Sbjct: 357 MRCRRIAPDTVTYNSL-------IDGLCKSGRISYAWELVDEMRDSGQPAD-------II 402
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI C V++A+ +++ + + G+ D +YNI+I G C+
Sbjct: 403 TYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCK-------------- 448
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ R+ + + + L++G + Y+ ++N +G + +A L ++ +G + ++V
Sbjct: 449 -QGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAV 507
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T I L + + A+++L MI+ L
Sbjct: 508 TCETIIRALFENDKNERAEKLLREMIARGLL 538
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ V +L Q+ NG+ P++V+ + LI YC LG++ A I + +MG P
Sbjct: 78 YPTVISLFYQLEFNGI-------KPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHP 130
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMN 151
+ ++ ++ GFC + K L + V L G ++ +Y +L+N
Sbjct: 131 NTITLTTLVKGFC------------LNHKVKEALHFHDHV---LALGFHFNQVSYGTLIN 175
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
G+ A + R+I ++ V S I+GL K +A E+ MI+ +S
Sbjct: 176 GLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKR-IS 234
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T T L L+ G+ + G EA M+ N PD +N L
Sbjct: 235 PTVVT----------------LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNIL 278
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ C+ + +A + M+ G +P + + +L+
Sbjct: 279 VDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 314
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+ A C G E + D+M G++P+ +V+Y ++ G+ + G ++ A+ +
Sbjct: 197 LLKALCKGNEVEVAVKVLDEMPGMGLVPN-------VVSYTTVLGGFVWRGDMDGAMKVF 249
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
R + + G SPD SY +++ GFCR+ + A + M++ E + EV Y ++Q
Sbjct: 250 REVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRV-MDIMEDNGVEPNEVTYGVMIQAYCK 308
Query: 143 EDAYS---SLMNDYLA-------------------QGDMEKAYILDREIAHDGY-LSESV 179
E +L+ D +A +G++EKA + R ++ L+ +V
Sbjct: 309 EKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAV 368
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
S I+ L KK + EA+ + S S T+ T L+ G
Sbjct: 369 VVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNT------------------LIAG 410
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G + EAAR D M+ P+ YN LI C+ N + + M+ +P+
Sbjct: 411 LCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPN 470
Query: 300 MFSVLALI 307
+ LI
Sbjct: 471 KSTYTILI 478
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
+G+ +SL Y +LI C GGE + + L D M+ GV +P+ TYN LI G+
Sbjct: 395 KGSVASLL-TYNTLIAGLCEGGELCEAARLWDDMVEKGV-------APNAFTYNMLIKGF 446
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF 104
C +G +E + +L M E P+ +Y I+I G
Sbjct: 447 CKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGI 481
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-PSLVTYNALIYGYCFLGRVEEALG 80
+LI+ C G+ + N+ D+ F GS SL+TYN LI G C G + EA
Sbjct: 372 TLIHWLCKKGKVLEARNVFDE---------FGKGSVASLLTYNTLIAGLCEGGELCEAAR 422
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
+ M E G++P+A +YN++I GFC++ + + EM E R L
Sbjct: 423 LWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRC--------------L 468
Query: 141 SDEDAYSSLMNDYLAQGDMEK 161
++ Y+ L++ L G M++
Sbjct: 469 PNKSTYTILIDGILLLGGMKQ 489
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 37/241 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG SPD +Y+ L ++ +C G+ + D M NGV P+ VTY
Sbjct: 255 RGWSPDVTSYTVL-------VDGFCRLGKLVDAIRVMDIMEDNGV-------EPNEVTYG 300
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I YC + EA+ ++ M L + V+ C KA E+ + K
Sbjct: 301 VMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRK 360
Query: 124 RILRMEEVVYESLMQGLSDED---------------------AYSSLMNDYLAQGDMEKA 162
VV +L+ L + Y++L+ G++ +A
Sbjct: 361 NCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEA 420
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L ++ G + T ++ I G K +E +L M+ N CL +TY LI
Sbjct: 421 ARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLP--NKSTYTILI 478
Query: 223 E 223
+
Sbjct: 479 D 479
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + ++P+ T+S L I+ C GE K N+ MI GV P++
Sbjct: 256 MTLKNVNPNVYTFSIL-------IDVLCKDGEVKKARNVLAVMIKQGV-------EPNIA 301
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ G + V +A + + G++ D SY+++I+GFC+ + +A L EM
Sbjct: 302 TYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEM 361
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
K ++ V Y SL+ GL DA YSSL++
Sbjct: 362 HSKNMVP-NTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQ 420
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L +I + G + T ++ ++GL K + R+A+E+ Y
Sbjct: 421 VDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEV-----------------Y 463
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
L+ N + + + ++ G G EA M PDG Y +I
Sbjct: 464 QVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFEN 523
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA + M+ G +
Sbjct: 524 NRNDKAVKLIREMIARGLL 542
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C S +L+ +MI + PD +TYN LIYG+ LG+++EA+
Sbjct: 198 YNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPD-------AITYNTLIYGFSILGQMKEAV 250
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+L M ++P+ +++I+I C+ E KA V+ + QG
Sbjct: 251 GLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKA---------------RNVLAVMIKQG 295
Query: 140 LSDEDA-YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ A YSSLM+ + ++ KA + IA G + + SV ING K EA
Sbjct: 296 VEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAV 355
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M S + + T TY++LI+ G G +S+A D M H
Sbjct: 356 NLFKEMHSKNMVPNT--VTYNSLID---------------GLCKLGRMSDAWDFIDEM-H 397
Query: 259 GNHKPDGGV-YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+P + Y+ L+ C+ VDKA + T++ + G +++ L+
Sbjct: 398 DRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILV 447
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 38/286 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+LI CL GE K H+ +I G F V+Y LI G C G + AL +
Sbjct: 130 TLIKGLCLNGEVRKALYFHNDVIAKG----FYLNE---VSYGTLINGLCKSGETKAALSL 182
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + + PD V YN +I C+ + Y+L EM K+I + + Y +L+ G S
Sbjct: 183 LRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYP-DAITYNTLIYGFS 241
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
G M++A L + T S+ I+ L K ++A+ +L
Sbjct: 242 -------------ILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVL 288
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
MI + TY +L++ C F ++ V++A +T+
Sbjct: 289 AVMIKQGV--EPNIATYSSLMDGC--------------FSVKE-VNKATYVFNTIARRGV 331
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D Y+ +I C+ K VD+A N++ M VP+ + +LI
Sbjct: 332 ALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLI 377
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 122/316 (38%), Gaps = 47/316 (14%)
Query: 13 YSSLFNAYFSLINAYCLGGEF------SKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
YSSLF+ S +N + L S + N++D + + +P + +N ++
Sbjct: 4 YSSLFSVP-STLNLFLLHRRLHIQPLPSFIDNVNDAVSSFNRILHMKNPTPPIFEFNKIL 62
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
L A+ + M + PD + +I+I+ FC + + A+ + +IL
Sbjct: 63 SSLAKLNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQLNYAFSIL-----GKIL 117
Query: 127 RM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
++ V +L++GL G++ KA ++ G+ V+
Sbjct: 118 KLGYEPNTVTLTTLIKGLC-------------LNGEVRKALYFHNDVIAKGFYLNEVSYG 164
Query: 183 VFINGLSKKARTREAKEILL---------------SMISNSCLSKTTHTTYDALIENCSN 227
INGL K T+ A +L ++I + C K YD E
Sbjct: 165 TLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVK 224
Query: 228 NEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
+ + L+ GF + G + EA + M N P+ ++ LI C+ V KA
Sbjct: 225 KIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKA 284
Query: 285 YNMYTRMVHYGFVPHM 300
N+ M+ G P++
Sbjct: 285 RNVLAVMIKQGVEPNI 300
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 56/314 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + L+ +MI + SP + T+N+LIYG+C +G++++A
Sbjct: 20 YNTIIDGLCKDKLVNDAYELYSEMIAEKI-------SPDVATFNSLIYGFCIIGQLKDAF 72
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--MEMDEKRILRMEEVVYESLM 137
G+ M ++P ++ I++ G C+ GK E K + M K + V Y S+M
Sbjct: 73 GLFSQMVLKNINPSVYTFTILVDGLCK---EGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129
Query: 138 QG----------------------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+G + +Y+ ++N + + +A IL +E+ G +
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY-------DALIENCSNN 228
+VT S I+GL K +L + C+ H Y DAL C +N
Sbjct: 190 PITVTYSSLIDGLCKST--------MLGSLLMRCMLMVNHLIYPLTVLYIDAL---CKSN 238
Query: 229 EFKSLVELVKGFRMRGLVSEAAR-AHDT---MLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
+ LVK + +G+ S+ + A D +L + + YN +I C+ D+A
Sbjct: 239 HLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEA 298
Query: 285 YNMYTRMVHYGFVP 298
+ ++M YG +P
Sbjct: 299 EALLSKMDDYGIIP 312
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 75/271 (27%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ +SPD T++SL I +C+ G+ L QM+ + P T +
Sbjct: 43 MIAEKISPDVATFNSL-------IYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVD 95
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY +++ GYC + V + + R + MG++P
Sbjct: 96 GLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAP 155
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN- 151
+ SYNI+I+GFC+I+ +A L EM + I+ + V Y SL+ GL SL+
Sbjct: 156 NTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPI-TVTYSSLIDGLCKSTMLGSLLMR 214
Query: 152 -----------------DYLAQGD-MEKAYILDREIAHDGYLSESV-------------- 179
D L + + ++KA L ++I G S+ +
Sbjct: 215 CMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKG 274
Query: 180 ------TESVFINGLSKKARTREAKEILLSM 204
T ++ INGL K+ EA+ +L M
Sbjct: 275 YSLNIQTYNIMINGLCKEGLFDEAEALLSKM 305
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 31/218 (14%)
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
++ D V YN +I G C+ + AYEL EM ++I D ++SL
Sbjct: 13 VNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKI--------------SPDVATFNSL 58
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
+ + G ++ A+ L ++ T ++ ++GL K+ + +EAK ++ M+ +
Sbjct: 59 IYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGV 118
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
L TY +++E G+ + V++ T+ P+ YN
Sbjct: 119 LPNV--VTYTSIME---------------GYCLVNEVNKTKHVFRTISRMGVAPNTQSYN 161
Query: 270 FLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+I C+ K V++A ++ M G VP + +LI
Sbjct: 162 IMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLI 199
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 146/356 (41%), Gaps = 70/356 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF---SLINAYCLGGEFSKVSNLHDQMIHNGVL-------- 49
M +G+ PD Y+SL + YF + + A + E + + D + +N ++
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651
Query: 50 --PDFVTG-------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIV 100
P +V +P +TYN +I YC G+ E+AL IL M G+ P+AV+YNI+
Sbjct: 652 YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711
Query: 101 ISGFCRIREPGKAYELKMEM---------------------DEK--RILRM-EEVVYESL 136
I G C+ KA EM EK +IL++ E++V L
Sbjct: 712 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 771
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
L+ Y++L+ + G KA ++ E+ G ++ VT + I G + +
Sbjct: 772 ELSLT---VYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 828
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEF-----KSLVELVKGFRMRGLVSEAAR 251
A + M + TTY+ L+ SN + +LV RGLV
Sbjct: 829 ALKTYSQMFVDGIAPNI--TTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV----- 881
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ Y+ L+ + R N K ++ M+ GFVP + + LI
Sbjct: 882 -----------PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 926
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 32/227 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI AYC + +L+ +MI NG++PD VT S +++YG+C G++ EA
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS-------SILYGFCRHGKLTEA 375
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ R M EMGL P+ VSY +I+ + +A+ L+ +M + I + V ++M
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI-SFDIVTCTTVMD 434
Query: 139 GL----SDEDA------------------YSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL ++A YS+L++ Y G ME A ++ +++ +
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+T S ING +KK +A ++L M+ + + T Y LI+
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT--IVYAILID 539
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 50/287 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNL----------HDQMIHNGVLP--DFVTGSPSLVTYNALI 66
Y +L+ A+C G+ ++ +L D++ +N V+ + P+LVTY LI
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
YC VEE+ + + M G+ PD V+ + ++ GFCR + +A L EM E
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE---- 384
Query: 127 RMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
GL + +Y++++N G + +A+ L ++ G + VT + +
Sbjct: 385 -----------MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM 433
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE---NCSNNEFKSLV-------- 234
+GL K +T+EA+E+ +++ + TY AL++ E LV
Sbjct: 434 DGLFKVGKTKEAEEVFETILKLNLAPNC--VTYSALLDGYCKLGKMELAELVLQKMEKEH 491
Query: 235 ---------ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
++ G+ +G++S+A M+ N P+ VY LI
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 67/322 (20%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
GL P+ +Y+++ N+ F G + NL QM+ G+ D VT +
Sbjct: 386 GLDPNHVSYATIINSLFK-------SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438
Query: 57 --------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P+ VTY+AL+ GYC LG++E A +L+ M + + P+ ++
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
++ +I+G+ + KA ++ EM ++ + + + Y+ L++ Y
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNV--------------MPNTIVYAILIDGYFKA 544
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G+ + A +E+ +V + +N L + R EA+ +++ M S
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI------- 597
Query: 217 TYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
D I N ++ L+ G+ G A M N + D YN LI
Sbjct: 598 --DPDIVNYAS--------LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL 647
Query: 277 RCKNVDKAYNMYTRMVHYGFVP 298
R D Y + +RM+ G P
Sbjct: 648 RLGKYDPRY-VCSRMIELGLAP 668
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
Y +LI +C G K + D+M+ G+ S LVTYNALI GYC VE
Sbjct: 775 LTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI-------SADLVTYNALIRGYCTGSHVE 827
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCR----IREPGKAYELKMEMDEKRILRMEEVV 132
+AL M G++P+ +YN ++ G + +L EM+E+ ++
Sbjct: 828 KALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV------ 881
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
+ Y L++ Y G+ +K IL E+ G++ T +V I+ +K
Sbjct: 882 --------PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSG 933
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDAL 221
+ EA+E+L +++ + + TYD L
Sbjct: 934 KMIEARELLNDLLTKGRIPNS--FTYDIL 960
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 57/328 (17%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT-----------GSPSL----------- 59
+L+ + G S+V ++ M+ GV+PD + G L
Sbjct: 99 TLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV 158
Query: 60 ----VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA-- 113
VTYN +I+G+C G V++ G+L M + GL D+++ NI++ G+CRI A
Sbjct: 159 DIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEW 218
Query: 114 --YELKMEMDEKRILRMEEVVYESLMQGLS-----------------DEDAYSSLMNDYL 154
Y L K ++ + ++ GL D Y++L+ +
Sbjct: 219 VMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFC 278
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL---SMISNSCL- 210
GD+ +A L EI G+ + + + N + + + + L+ ++I+ C
Sbjct: 279 KTGDLTRAESLFNEIL--GFWKDE--DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334
Query: 211 --SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
+ +H+ Y +I N + + ++ GF G ++EAA M P+ Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+I + V +A+N+ ++MV G
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGI 422
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 136/337 (40%), Gaps = 51/337 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL D T + L + YC G + ++ GV D ++
Sbjct: 188 MVKRGLCFDSITCNIL-------VKGYCRIGLVQYAEWVMYNLVDGGVTKD-------VI 233
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
N LI GYC G + +A ++ + D V+YN ++ FC+ + +A L E+
Sbjct: 234 GLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI 293
Query: 121 -----DEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
DE R L+ +VV ++ ++ L Y++L+ Y +E+++ L +++ +G
Sbjct: 294 LGFWKDEDR-LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGI 352
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKS-- 232
+ + VT S + G + + EA + M H +Y +I N+ FKS
Sbjct: 353 MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGL--DPNHVSYATII----NSLFKSGR 406
Query: 233 ----------------------LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
++ G G EA +T+L N P+ Y+
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
L+ +C+ ++ A + +M P++ + ++I
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 12 TYSSLFNAYF-SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYC 70
T + L+ ++F +LI Y FS S M G++P +L +N L+Y +
Sbjct: 53 TKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVP-------TLPFWNTLLYQFN 105
Query: 71 FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
G V + + M G+ PD S N+++ C++ + A D ++ ++
Sbjct: 106 ASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND---VVDIDN 162
Query: 131 VVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
V Y +++ G + +G +++ + L E+ G +S+T ++ + G +
Sbjct: 163 VTYNTVIWG-------------FCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCR 209
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ A+ ++ +++ T D + L L+ G+ GL+S+A
Sbjct: 210 IGLVQYAEWVMYNLVDGG-------VTKDVI----------GLNTLIDGYCEAGLMSQAT 252
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
+ + K D YN L+ C+ ++ +A +++ ++ +
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RGL P+ TY L + Y + G K LH +MI G +P +L TYN
Sbjct: 878 RGLVPNAATYDILVSGYGRV-------GNRKKTIILHIEMITKGFVP-------TLKTYN 923
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIR-EPGKAYELKM--EM 120
LI Y G++ EA +L + G P++ +Y+I+ G+ + EP LK E+
Sbjct: 924 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEI 983
Query: 121 DEKRIL 126
+ K++L
Sbjct: 984 EVKKLL 989
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 35/223 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+GL P+ TY++L I+ +C G F + +L + M G SP+L TYN
Sbjct: 315 QGLVPNTNTYTTL-------IDGHCKAGNFERAYDLMNLMSSEGF-------SPNLCTYN 360
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREP----GKAYEL 116
A++ G C GRV+EA +L + GL PD +YNI++S C+ IR+ K ++
Sbjct: 361 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 420
Query: 117 KMEMD-------------EKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKA 162
++ D E R+ E E++ G + Y+S++ Y +G++ A
Sbjct: 421 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 480
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
++ G +S+T I+GL K+++ EA+ + SMI
Sbjct: 481 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMI 523
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 51/328 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ PD +Y + + YC G + M+ G + D T
Sbjct: 136 MCVRGVQPDSISYRVM-------VVMYCKIGNILEADKWLSVMLERGFVVDNAT------ 182
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ +I + G AL R + +MGL P+ +++ +I G C+ +A+E+
Sbjct: 183 -FTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEM---- 237
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESV 179
+EE+V + + ++SL++ +G EKA+ + + + + + +
Sbjct: 238 -------LEEMVGKGWKPNVY---THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 287
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVEL-- 236
T + I+G ++ + A E+LLS + L T+T Y LI+ +C F+ +L
Sbjct: 288 TYTAMISGYCREDKLNRA-EMLLSRMKEQGLVPNTNT-YTTLIDGHCKAGNFERAYDLMN 345
Query: 237 -----------------VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
V G RG V EA + + KPD YN L+ EHC+ +
Sbjct: 346 LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQE 405
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N+ +A ++ +M+ G P + S LI
Sbjct: 406 NIRQALALFNKMLKIGIQPDIHSYTTLI 433
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 82/347 (23%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D G +L N + +I C G + + ++M+ G P++ T+ +LI G
Sbjct: 208 DMGLEPNLIN-FTCMIEGLCKRGSIKQAFEMLEEMVGKG-------WKPNVYTHTSLIDG 259
Query: 69 YCFLGRVEEALGI-LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
C G E+A + L+ + P+ ++Y +ISG+CR E K+ E + R
Sbjct: 260 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR--------EDKLNRAEMLLSR 311
Query: 128 MEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
M+E QGL + + Y++L++ + G+ E+AY L ++ +G+ T + +N
Sbjct: 312 MKE-------QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVN 364
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-ENCSNNEFK-------------- 231
GL K+ R +EA ++L N K TY+ L+ E+C +
Sbjct: 365 GLCKRGRVQEAYKMLEDGFQNGL--KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 422
Query: 232 -----SLVELVKGF----RMRG---LVSEAAR--------AHDTMLHG------------ 259
S L+ F RM+ EA R + +M+ G
Sbjct: 423 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 482
Query: 260 ------NH--KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+H PD Y +I C+ D+A ++Y M+ G VP
Sbjct: 483 FFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 529
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD ++Y +LI +C + ++ + G++P +
Sbjct: 417 MLKIGIQPD-------IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP-------TNK 462
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++I GYC G + A+ + + G +PD+++Y +ISG C+ + +A L M
Sbjct: 463 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 522
Query: 121 DEKRILRME 129
EK ++ E
Sbjct: 523 IEKGLVPCE 531
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 54/258 (20%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C + V +L+ +M+ + SP++VTYN LI+G+C +G++ +A
Sbjct: 23 YSVIIDGMCKDKLVNDVVDLYSEMVTKRI-------SPNIVTYNTLIHGFCIVGQLNDAF 75
Query: 80 GILR-----GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
G+L+ M G++PD SY I+I+GFC+I+ +A L EM K+I V Y
Sbjct: 76 GLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFP-NVVTYN 134
Query: 135 SLMQGLS------------DE----------DAYSSLMNDYLAQGDMEKAYILDREIAHD 172
SL+ GL DE Y+S+++ D++KA + ++
Sbjct: 135 SLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQ 194
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTTHTTYDALIENCSNNEFK 231
T ++ I GL K R ++A+++ ++ C L T+T
Sbjct: 195 DIQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTI-------------- 240
Query: 232 SLVELVKGFRMRGLVSEA 249
++ GF +GL EA
Sbjct: 241 ----MIHGFCSKGLFGEA 254
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 28/130 (21%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
Y SLIN C G S L D+M G P+ +T +
Sbjct: 132 TYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKL 191
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
PS+ TYN LIYG C +GR+++A + + G S DA +Y I+I GFC
Sbjct: 192 KDQDIQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLF 251
Query: 111 GKAYELKMEM 120
G+A+ L +M
Sbjct: 252 GEAFTLLSKM 261
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G++PD ++Y +IN +C + NL ++M + P+ +V
Sbjct: 86 MARKGVTPDT-------DSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPN-------VV 131
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G C GR+ AL ++ M + G P+ ++YN ++ C+ + KA ++
Sbjct: 132 TYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKL 191
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ I + Y L+ GL A+ E Y+L + + D Y T
Sbjct: 192 KDQDI-QPSMYTYNILIYGLCKVGRLKD------ARKVFE--YLLVKGCSLDAY-----T 237
Query: 181 ESVFINGLSKKARTREAKEILLSM 204
++ I+G K EA +L M
Sbjct: 238 YTIMIHGFCSKGLFGEAFTLLSKM 261
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 24/247 (9%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P +V Y+ +I G C V + + + M +SP+ V+YN +I GFC + + A+
Sbjct: 17 QPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFG 76
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L +++ I+ + V D D+Y ++N + +++A L E+
Sbjct: 77 L-LQLFIFGIMARKGVT--------PDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIF 127
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
VT + INGL + R A E++ M TY+++++ C N + +
Sbjct: 128 PNVVTYNSLINGLCRSGRISYALELVDEMHDRG--QPPNIITYNSILDVLCKNYDVDKAI 185
Query: 235 ELVKGFRMRGLVSEAARAHDTMLH-----GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
+ + + + + ++ +++ G K V+ +L+V+ C AY YT
Sbjct: 186 VFLTKLKDQD-IQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSL----DAYT-YT 239
Query: 290 RMVHYGF 296
M+H GF
Sbjct: 240 IMIH-GF 245
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 26/227 (11%)
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
+LR + + PD V Y+++I G C+ + +L EM KRI V Y +L+ G
Sbjct: 7 LLRRVDRKLVQPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRI-SPNIVTYNTLIHGF 65
Query: 141 SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
+ND + I+ R+ G ++ + + ING K EA +
Sbjct: 66 ----CIVGQLNDAFGLLQLFIFGIMARK----GVTPDTDSYIIMINGFCKIKMVDEAMNL 117
Query: 201 LLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M TY++LI G G +S A D M
Sbjct: 118 FEEMHCKQIFPNV--VTYNSLIN---------------GLCRSGRISYALELVDEMHDRG 160
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN ++ C+ +VDKA T++ P M++ LI
Sbjct: 161 QPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILI 207
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 74/300 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + ++PD T++ L ++ C G+ + N+ M+ GV PD +V
Sbjct: 258 MLLKNINPDIYTFNIL-------VDVLCKEGKIKEAKNVIAVMMKEGVEPD-------VV 303
Query: 61 TYNALIYGYCFLGRV----------------------------EEALGILRGMPEMGLSP 92
TYN+L+ GYC + V +EAL + M G++P
Sbjct: 304 TYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITP 363
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL------------ 140
D V+YN +I G C+ R A+E EM I Y SL+ L
Sbjct: 364 DKVTYNSLIDGLCKARRIPCAWEFVDEMHANGI-PANIFTYNSLIDALCKNHHVDKAIVL 422
Query: 141 ----------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
SD YS L++ QG ++ A ++ +++ GY T S+ INGL
Sbjct: 423 VKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCS 482
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYD----ALIENCSNNEFKSLVELVKGFRMRGLV 246
K EA +L M N C+ TY+ AL +N N++ + +L++ RGL+
Sbjct: 483 KGLFDEATTLLSKMEDNGCIPDA--VTYEPINRALFKNDENDKAE---QLLREMIARGLL 537
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I++ C + L+ +MI + SP+++T+N+LIYG+C +G+++EA G+
Sbjct: 202 TIIDSLCKHKFVTDAYELYSEMITKRI-------SPNIITFNSLIYGFCIVGQLKEAFGL 254
Query: 82 LRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
M ++PD ++NI++ C +I+E + M K + + V Y SLM
Sbjct: 255 FYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMM----KEGVEPDVVTYNSLMD 310
Query: 139 GLS-DEDAYSS-----LMNDYLAQGDME---------KAYILDREIAHDGYLSESVTESV 183
G ++ Y + +++ A D++ +A L E+ G + VT +
Sbjct: 311 GYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNS 370
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL K R A E + M +N + TY++LI+ C N+ + LVK +
Sbjct: 371 LIDGLCKARRIPCAWEFVDEMHANGIPANI--FTYNSLIDALCKNHHVDKAIVLVKKIKD 428
Query: 243 RGLVSE 248
+G+ S+
Sbjct: 429 QGIQSD 434
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L+ CL G+ + + HD ++ G D VT Y LI G C +G + AL +
Sbjct: 132 TLMKGLCLNGKVKESLHFHDHVLALGFQLDHVT-------YGTLINGLCKIGETKAALLM 184
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR + + D V +N +I C+ + AYEL EM KRI + + SL+ G
Sbjct: 185 LRKIEGRLVESDVVMHNTIIDSLCKHKFVTDAYELYSEMITKRI-SPNIITFNSLIYG-- 241
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+ G +++A+ L ++ + T ++ ++ L K+ + +EAK ++
Sbjct: 242 -----------FCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVI 290
Query: 202 LSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRG------------LVSE 248
M+ + TY++L++ C E ++ G ++ E
Sbjct: 291 AVMMKEGV--EPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDE 348
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
A + M PD YN LI C+ + + A+ M G ++F+ +LI
Sbjct: 349 ALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLI 407
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 55/275 (20%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+PS++ +N ++ L + + + + ++ + PD + NI+I+ +C +++ A+
Sbjct: 57 TPSIIQFNKILTSLVKLNQYPTVISLSK---KLEIRPDIFTLNILINCYCHVQQMPFAFS 113
Query: 116 LKMEMDEKRILRM----EEVVYESLMQGLS----------------------DEDAYSSL 149
+ +IL+M + + +LM+GL D Y +L
Sbjct: 114 I-----FAKILKMGFESDAITLTTLMKGLCLNGKVKESLHFHDHVLALGFQLDHVTYGTL 168
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSES--VTESVFINGLSKKARTREAKEILLSMISN 207
+N G+ + A ++ R+I +G L ES V + I+ L K +A E+ MI+
Sbjct: 169 INGLCKIGETKAALLMLRKI--EGRLVESDVVMHNTIIDSLCKHKFVTDAYELYSEMITK 226
Query: 208 SCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV 267
T+++LI GF + G + EA ML N PD
Sbjct: 227 RISPNI--ITFNSLIY---------------GFCIVGQLKEAFGLFYQMLLKNINPDIYT 269
Query: 268 YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+N L+ C+ + +A N+ M+ G P + +
Sbjct: 270 FNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVT 304
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G++PD T++ L IN YC E ++ +++ G PD +T+
Sbjct: 91 FHGITPDIVTFNIL-------INCYCHLREMDFSFSMLAKILKMGYQPD-------TITF 136
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G+V+EAL + +G D VSY +I+G C+I E A ++ ++ E
Sbjct: 137 NTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKI-E 195
Query: 123 KRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGDME 160
+++ V+Y +++ L + ++SL+ + G +
Sbjct: 196 GKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFK 255
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A+ L EI + T ++ ++ L K+ + +EAK ++ M+ + TY++
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDV--VTYNS 313
Query: 221 LIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L++ C NE K + ++S+ A PD Y+ +I C+ K
Sbjct: 314 LMDGYCLVNEVN------KAKHVLIIISKIRVA----------PDAHSYSIMINGLCKVK 357
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD+A +++ M G P+ + +LI
Sbjct: 358 MVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ +MI + SP++VT+N+LIYG+C +G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITKRI-------SPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + ++PD ++NI++ C+ GK E K + + M+E V
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCK---EGKMKEAKSVI----AVMMKECV------- 304
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ D Y+SLM+ Y ++ KA + I+ ++ + S+ INGL K EA
Sbjct: 305 MPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALS 364
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ M T TY +LI+ G G S A D M
Sbjct: 365 LFYEMRCRGIAPNT--VTYSSLID---------------GLCKSGRYSYAWDLVDEMHDH 407
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H P+ YN LI C+ +DKA + ++ G P M + LI
Sbjct: 408 GHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILI 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++P+ TYS SLI+ C G +S +L D+M +G P++
Sbjct: 369 MRCRGIAPNTVTYS-------SLIDGLCKSGRYSYAWDLVDEMHDHG-------HPPNIF 414
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI C ++++A+ +++ + + G+ PD +YNI+I G C+
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK-------------- 460
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
R+ +V + L++G S D Y+ ++N G ++A +L ++ +G + ++V
Sbjct: 461 -GGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T I K +A+++L MI+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SP+ T++SL I +C+ G+F L +++ + PD T +
Sbjct: 229 MITKRISPNVVTFNSL-------IYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTYN+L+ GYC + V +A +L + ++ ++P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS----- 147
DA SY+I+I+G C+++ +A L EM R + V Y SL+ GL YS
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEM-RCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 148 -----------------SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
SL++ ++KA L ++I G + T ++ I+GL K
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 191 KARTREAKEILLSMI 205
R A+++ ++
Sbjct: 461 GGRLHNARDVFQDLL 475
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD TY+ L I+ C GG ++ ++ G S + TYN
Sbjct: 442 QGIQPDMCTYNIL-------IDGLCKGGRLHNARDVFQDLLIKGY-------SLDVQTYN 487
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G C +G +EA +L M + G+ PDAV+Y +I F E KA +L EM +
Sbjct: 488 IMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR 547
Query: 124 RILRME 129
+L+ +
Sbjct: 548 GLLKWK 553
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 116/277 (41%), Gaps = 54/277 (19%)
Query: 56 SPSLVTYNALIYGYCFLGRVEE--------ALGILRGMPEMGLSPDAVSYNIVISGFCRI 107
SPS++ +N + LG + + A+ + + G++PD V++NI+I+ +C +
Sbjct: 58 SPSIIQFNKI------LGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 108 REPGKAYELKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY 163
RE ++ + +IL+M + + + +L++GL G +++A
Sbjct: 112 REMDFSFSML-----AKILKMGYQPDTITFNTLIKGLC-------------VNGKVKEAL 153
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL---------------SMISNS 208
+ G+ + V+ INGL K TR A ++L ++I +
Sbjct: 154 HFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSL 213
Query: 209 CLSKTT---HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C K + Y +I + + L+ GF + G +A R ++ N PD
Sbjct: 214 CKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDV 273
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+N ++ C+ + +A ++ M+ +P + +
Sbjct: 274 YTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVT 310
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G++PD T++ L IN YC E ++ +++ G PD +T+
Sbjct: 91 FHGITPDIVTFNIL-------INCYCHLREMDFSFSMLAKILKMGYQPD-------TITF 136
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G+V+EAL + +G D VSY +I+G C+I E A ++ ++ E
Sbjct: 137 NTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKI-E 195
Query: 123 KRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGDME 160
+++ V+Y +++ L + ++SL+ + G +
Sbjct: 196 GKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFK 255
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A+ L EI + T ++ ++ L K+ + +EAK ++ M+ + TY++
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDV--VTYNS 313
Query: 221 LIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L++ C NE K + ++S+ A PD Y+ +I C+ K
Sbjct: 314 LMDGYCLVNEVN------KAKHVLIIISKIRVA----------PDAHSYSIMINGLCKVK 357
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD+A +++ M G P+ + +LI
Sbjct: 358 MVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ +MI + SP++VT+N+LIYG+C +G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITKRI-------SPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + ++PD ++NI++ C+ GK E K + + M+E V
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCK---EGKMKEAKSVI----AVMMKECV------- 304
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ D Y+SLM+ Y ++ KA + I+ ++ + S+ INGL K EA
Sbjct: 305 MPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALS 364
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ M T TY +LI+ G G S A D M
Sbjct: 365 LFYEMRCRGIAPNT--VTYSSLID---------------GLCKSGRYSYAWDLVDEMHDH 407
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H P+ YN LI C+ +DKA + ++ G P M + LI
Sbjct: 408 GHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILI 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++P+ TYS SLI+ C G +S +L D+M +G P++
Sbjct: 369 MRCRGIAPNTVTYS-------SLIDGLCKSGRYSYAWDLVDEMHDHG-------HPPNIF 414
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI C ++++A+ +++ + + G+ PD +YNI+I G C+
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK-------------- 460
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
R+ +V + L++G S D Y+ ++N G ++A +L ++ +G + ++V
Sbjct: 461 -GGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T I K +A+++L MI+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SP+ T++SL I +C+ G+F L +++ + PD T +
Sbjct: 229 MITKRISPNVVTFNSL-------IYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTYN+L+ GYC + V +A +L + ++ ++P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS----- 147
DA SY+I+I+G C+++ +A L EM R + V Y SL+ GL YS
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEM-RCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 148 -----------------SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
SL++ ++KA L ++I G + T ++ I+GL K
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 191 KARTREAKEILLSMI 205
R A+++ ++
Sbjct: 461 GGRLHNARDVFQDLL 475
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD TY+ L I+ C GG ++ ++ G S + TYN
Sbjct: 442 QGIQPDMCTYNIL-------IDGLCKGGRLHNARDVFQDLLIKGY-------SLDVQTYN 487
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G C +G +EA +L M + G+ PDAV+Y +I F E KA +L EM +
Sbjct: 488 IMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR 547
Query: 124 RILRME 129
+L+ +
Sbjct: 548 GLLKWK 553
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 116/277 (41%), Gaps = 54/277 (19%)
Query: 56 SPSLVTYNALIYGYCFLGRVEE--------ALGILRGMPEMGLSPDAVSYNIVISGFCRI 107
SPS++ +N + LG + + A+ + + G++PD V++NI+I+ +C +
Sbjct: 58 SPSIIQFNKI------LGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 108 REPGKAYELKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY 163
RE ++ + +IL+M + + + +L++GL G +++A
Sbjct: 112 REMDFSFSML-----AKILKMGYQPDTITFNTLIKGLC-------------VNGKVKEAL 153
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL---------------SMISNS 208
+ G+ + V+ INGL K TR A ++L ++I +
Sbjct: 154 HFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSL 213
Query: 209 CLSKTT---HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C K + Y +I + + L+ GF + G +A R ++ N PD
Sbjct: 214 CKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDV 273
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+N ++ C+ + +A ++ M+ +P + +
Sbjct: 274 YTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVT 310
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G++PD T++ L IN YC E ++ +++ G PD +T+
Sbjct: 91 FHGITPDIVTFNIL-------INCYCHLREMDFSFSMLAKILKMGYQPD-------TITF 136
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI G C G+V+EAL + +G D VSY +I+G C+I E A ++ ++ E
Sbjct: 137 NTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKI-E 195
Query: 123 KRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGDME 160
+++ V+Y +++ L + ++SL+ + G +
Sbjct: 196 GKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFK 255
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A+ L EI + T ++ ++ L K+ + +EAK ++ M+ + TY++
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDV--VTYNS 313
Query: 221 LIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L++ C NE K + ++S+ A PD Y+ +I C+ K
Sbjct: 314 LMDGYCLVNEVN------KAKHVLIIISKIRVA----------PDAHSYSIMINGLCKVK 357
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD+A +++ M G P+ + +LI
Sbjct: 358 MVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ +MI + SP++VT+N+LIYG+C +G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITKRI-------SPNVVTFNSLIYGFCIVGQFKDAF 258
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + ++PD ++NI++ C+ GK E K + + M+E V
Sbjct: 259 RLFHEIVLKNINPDVYTFNIMVDALCK---EGKMKEAKSVI----AVMMKECV------- 304
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ D Y+SLM+ Y ++ KA + I+ ++ + S+ INGL K EA
Sbjct: 305 MPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALS 364
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ M T TY +LI+ G G S A D M
Sbjct: 365 LFYEMRCRGIAPNT--VTYSSLID---------------GLCKSGRYSYAWDLVDEMHDH 407
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H P+ YN LI C+ +DKA + ++ G P M + LI
Sbjct: 408 GHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILI 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++P+ TYS SLI+ C G +S +L D+M +G P++
Sbjct: 369 MRCRGIAPNTVTYS-------SLIDGLCKSGRYSYAWDLVDEMHDHG-------HPPNIF 414
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI C ++++A+ +++ + + G+ PD +YNI+I G C+
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK-------------- 460
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
R+ +V + L++G S D Y+ ++N G ++A +L ++ +G + ++V
Sbjct: 461 -GGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T I K +A+++L MI+ L
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGLL 550
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ + +SP+ T++SL I +C+ G+F L +++ + PD T +
Sbjct: 229 MITKRISPNVVTFNSL-------IYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTYN+L+ GYC + V +A +L + ++ ++P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS----- 147
DA SY+I+I+G C+++ +A L EM R + V Y SL+ GL YS
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEM-RCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 148 -----------------SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
SL++ ++KA L ++I G + T ++ I+GL K
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 191 KARTREAKEILLSMI 205
R A+++ ++
Sbjct: 461 GGRLHNARDVFQDLL 475
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD TY+ L I+ C GG ++ ++ G S + TYN
Sbjct: 442 QGIQPDMCTYNIL-------IDGLCKGGRLHNARDVFQDLLIKGY-------SLDVQTYN 487
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G C +G +EA +L M + G+ PDAV+Y +I F E KA +L EM +
Sbjct: 488 IMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR 547
Query: 124 RILRME 129
+L+ +
Sbjct: 548 GLLKWK 553
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 116/277 (41%), Gaps = 54/277 (19%)
Query: 56 SPSLVTYNALIYGYCFLGRVEE--------ALGILRGMPEMGLSPDAVSYNIVISGFCRI 107
SPS++ +N + LG + + A+ + + G++PD V++NI+I+ +C +
Sbjct: 58 SPSIIQFNKI------LGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 108 REPGKAYELKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY 163
RE ++ + +IL+M + + + +L++GL G +++A
Sbjct: 112 REMDFSFSML-----AKILKMGYQPDTITFNTLIKGLC-------------VNGKVKEAL 153
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL---------------SMISNS 208
+ G+ + V+ INGL K TR A ++L ++I +
Sbjct: 154 HFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSL 213
Query: 209 CLSKTT---HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C K + Y +I + + L+ GF + G +A R ++ N PD
Sbjct: 214 CKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDV 273
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+N ++ C+ + +A ++ M+ +P + +
Sbjct: 274 YTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVT 310
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I++ C ++ L+ QMI + SP +VT+N+LIYG+CF+G++ EA G+
Sbjct: 130 TIIDSLCKEKLVTEAYELYSQMIVKKI-------SPDVVTFNSLIYGFCFVGQLIEAFGL 182
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRI-REPGKAYELKMEMDEKRILRMEEVVYESLMQ-G 139
M ++P+ ++NI++ C+ G L M M + + + V ++ Q G
Sbjct: 183 FHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMG 242
Query: 140 L-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D +Y+ ++N + + +A+ L E+ G +VT S I+GL K R A
Sbjct: 243 VPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAW 302
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE--------LVKGFRMRGLVSEA 249
E++ M N + TY++LI+ C N+ ++ L+ G +G + +A
Sbjct: 303 ELVDEMRDNG--QQPDICTYNSLIDALCKNHHVDQGIQLDMYTYNILIDGLCKQGRLKDA 360
Query: 250 ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+L + Y +I C +D+A + ++M G VP + +I
Sbjct: 361 QVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETII 418
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 44/244 (18%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD +Y+ + IN +C ++ +L ++M G+ SP+ VTY++
Sbjct: 242 GVPPDAQSYNIM-------INGFCKIKMVNEAFSLFNEMRCRGI-------SPNTVTYSS 287
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G C LGR+ A ++ M + G PD +YN +I C+ + +L M
Sbjct: 288 LIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQLDM------ 341
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L+ GL QG ++ A ++ +++ GY T ++
Sbjct: 342 ------YTYNILIDGLC-------------KQGRLKDAQVIFQDLLIKGYNLTVWTYTIM 382
Query: 185 INGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
INGL + EA+ +L M N C+ + T T AL EN N + +L++ +
Sbjct: 383 INGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAE---KLLREMIV 439
Query: 243 RGLV 246
RGL+
Sbjct: 440 RGLL 443
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 56/289 (19%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +LIN CL G+F + + HD M+ + + VTY LI G C +G+ EA
Sbjct: 57 TFNTLINGMCLNGKFKEALHFHDHMLAH-------VFHLNQVTYAILINGLCKMGKTTEA 109
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L LR + ++ + + +N +I C+ + +AYEL +M K+I
Sbjct: 110 LQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKI------------- 156
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D ++SL+ + G + +A+ L E+ T ++ ++ L K+ + AK
Sbjct: 157 -SPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAK 215
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+L M+ NE V++A T+
Sbjct: 216 NLLAMMMKQV-------------------NE----------------VNKAKHVLSTITQ 240
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN +I C+ K V++A++++ M G P+ + +LI
Sbjct: 241 MGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLI 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 41/206 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+SP+ TYSSL I+ C G S L D+M NG PD +
Sbjct: 273 MRCRGISPNTVTYSSL-------IDGLCKLGRISYAWELVDEMRDNGQQPD-------IC 318
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI C V++ G+ D +YNI+I G C+
Sbjct: 319 TYNSLIDALCKNHHVDQ-----------GIQLDMYTYNILIDGLCK-------------- 353
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ R+ + + + L++G + Y+ ++N +G +++A L ++ +G + ++V
Sbjct: 354 -QGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAV 412
Query: 180 TESVFINGLSKKARTREAKEILLSMI 205
T I L + + A+++L MI
Sbjct: 413 TCETIIRALFENDKNERAEKLLREMI 438
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 48/265 (18%)
Query: 16 LFNAYFS--LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
L N Y S L++A C G + N+ M+ GV+PD +VTY +L+ GYC +
Sbjct: 206 LPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPD-------VVTYTSLMDGYCLVN 258
Query: 74 RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY 133
+V +A + + + + PD SY I+I+G C+I+ +A L EM V Y
Sbjct: 259 QVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMH----CEPNMVTY 314
Query: 134 ESLMQGLSDED-----------------------AYSSLMNDYLAQGDMEKAYILDREIA 170
SL+ GL Y+SL++ ++KA L ++I
Sbjct: 315 SSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIK 374
Query: 171 HDGYLSESVTESVFINGLSKKARTR-------EAKEILLSMISNSCL--SKTTHTTYDAL 221
G T ++ I+GL K+ R R EA +L M N C+ + T T AL
Sbjct: 375 DQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYETIIRAL 434
Query: 222 IENCSNNEFKSLVELVKGFRMRGLV 246
+N N++ + +L++ RGL+
Sbjct: 435 FKNDENDKAE---KLLREMIARGLL 456
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P +VT+N +I YC LG + A +L + + G P+ V+ +I G E A +
Sbjct: 101 TPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKG-----ETRAALQ 155
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ ++ E +++ + V+Y +++ LS A++ L+N ++A+ L E+ L
Sbjct: 156 MLRKI-EGKLVNTDVVMYTAIIDMLSFM-AFAWLVNS-------KQAFGLFHEMVLTNIL 206
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
T ++ ++ L K+ ++AK ++ M+ + TY +L++
Sbjct: 207 PNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDV--VTYTSLMD------------ 252
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G+ + V++A + + KPD Y +I C+ K VD+A N++ M
Sbjct: 253 ---GYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEM 305
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 45/264 (17%)
Query: 43 MIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS 102
+ H VL + + P++ T N L+ C G V++A ++ M + G+ PD V+Y ++
Sbjct: 196 LFHEMVLTNIL---PNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMD 252
Query: 103 GFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA 162
G+C + + KA + + +++I D +Y+ ++N +++A
Sbjct: 253 GYCLVNQVNKAKHVFNILGKRKI--------------KPDVHSYTIIINGLCKIKMVDEA 298
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L +E+ + + VT S I+GL K R A E+L M + TY++L+
Sbjct: 299 LNLFKEMHCEPNM---VTYSSLIDGLCKSGRVSHAWELLDKMHDDRG-QPVNIITYNSLL 354
Query: 223 EN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC---RC 278
C N+ + LVK + +G+ +P+ YN LI C R
Sbjct: 355 HALCKNHHVDKAIALVKKIKDQGI----------------EPNMTTYNILIDGLCKEGRL 398
Query: 279 KNV----DKAYNMYTRMVHYGFVP 298
+N D+A + ++M G +P
Sbjct: 399 RNAQGLFDEAVTLLSKMEDNGCIP 422
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 53/294 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L++ C G+ NL NG+ SP +VTY LI GYC V+EA
Sbjct: 263 TYNTLVDGLCRAGKIKVAHNLV-----NGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEA 317
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L IL M GL P+ V+YN +I G C ++ K M+E++ +
Sbjct: 318 LDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDK---------------MKEILEQMKGD 362
Query: 139 GLSDEDA--YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
G S DA +++L+N + G++++A+ + + ++S + SV I L +K +
Sbjct: 363 GGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGK 422
Query: 197 A---------KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVS 247
A KEILLS L+ + + L EN G
Sbjct: 423 AEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCEN-------------------GKTK 463
Query: 248 EAARA-HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+A R M G P Y +I+ HC+ + + Y + M+ F+P +
Sbjct: 464 KAERVLRQLMKRGTQDPLS--YQIVILGHCKEGSYENGYGLLVWMLRRDFLPDI 515
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 44/251 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-PSLVTY 62
RGL P+ TY++L I C ++ K+ + +QM +G GS P T+
Sbjct: 327 RGLKPNIVTYNTL-------IKGLCEAQKWDKMKEILEQMKGDG-------GSIPDACTF 372
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI +C G ++EA + M ++ +S D+ SY+++I C+ + GKA L E+ E
Sbjct: 373 NTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFE 432
Query: 123 KRIL---------------------------RMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
K IL + E V+ + + +G D +Y ++ +
Sbjct: 433 KEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCK 492
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT- 214
+G E Y L + +L + I+G +K + AKE L M+ +S +T+
Sbjct: 493 EGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTST 552
Query: 215 -HTTYDALIEN 224
H+ + L+E
Sbjct: 553 WHSILNRLLEQ 563
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 108/289 (37%), Gaps = 80/289 (27%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHN-GVLPDFVTGSPSLVTYN 63
G+SP T++S+ G + ++D+M+ GV PD TYN
Sbjct: 185 GVSPGVVTFNSVLLVLLK-------RGRTNMAKEVYDEMLKTYGVKPD-------TYTYN 230
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI G+C V+E + M PD V+YN ++ G CR + A+ L M +K
Sbjct: 231 ILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKK 290
Query: 124 -RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+ L + V Y +L++G Y + ++++A + E+ G VT +
Sbjct: 291 CKDLSPDVVTYTTLIRG-------------YCRKQEVDEALDILEEMNGRGLKPNIVTYN 337
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
I GL + + + KEIL E +KG
Sbjct: 338 TLIKGLCEAQKWDKMKEIL---------------------------------EQMKG--- 361
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G PD +N LI HC N+D+A+ ++ M
Sbjct: 362 ---------------DGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 130/321 (40%), Gaps = 56/321 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG SPD +S + F GE K L +++ G++PD +
Sbjct: 543 MVHRGCSPDLMLLNSYMDCVFK-------AGEVEKGRALFEEIKAQGLVPD-------VR 588
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y+ LI+G G E + M E GL D ++YN VI GFC+ + KAY+L EM
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
K L+ V Y S++ GL+ D YSSL++ + G
Sbjct: 649 KTKG-LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+++AY++ E+ G S T + ++ L K EA+ +M + C TY
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKC--SPNAMTY 765
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
+I C +F + + +GL KP+ Y +I +
Sbjct: 766 SIMINGLCMIRKFNKAFVFWQEMQKQGL----------------KPNNITYTTMIAGLAK 809
Query: 278 CKNVDKAYNMYTRMVHYGFVP 298
NV +A ++ R G VP
Sbjct: 810 AGNVMEARGLFDRFKASGGVP 830
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 119/300 (39%), Gaps = 46/300 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL PD+ TY++L I C + L +++ D P +
Sbjct: 299 MKAQGLVPDDVTYTTL-------IGVLCKARRLDEAVELFEEL-------DLNRSVPCVY 344
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN +I GY G+ +EA +L G P ++YN +++ R GK E
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGR---KGKVEE----- 396
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
LR+ + + + L+ Y+ L++ G++E A + + G +T
Sbjct: 397 ----ALRIHDEMRQDAAPNLT---TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I+ L K + EA I L + C + + ++ L+ G
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVC-----------------SPDSRTFCSLIDGL 492
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
RG V +A ++ ML + P+ VY LI +C + + +Y MVH G P +
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL 552
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 50/299 (16%)
Query: 28 CLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGM 85
CLG G+ + +HD+M + +P+L TYN LI C G +E AL + M
Sbjct: 387 CLGRKGKVEEALRIHDEMRQDA--------APNLTTYNILIDMLCKAGELEAALKVQDTM 438
Query: 86 PEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA 145
E GL P+ ++ NI+I C+ ++ +A + + +D K D
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC--------------SPDSRT 484
Query: 146 YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
+ SL++ +G ++ AY L ++ + V + I K R + +I M+
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 206 SNSCLSKTT--HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKP 263
C ++ D + + + ++L E +K +GLV + R++ ++HG K
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA---QGLVPD-VRSYSILIHGLVKA 600
Query: 264 --------------------DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
D YN +I C+ VDKAY + M G P + +
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 47/292 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P T+S+L IN CL G+ + + HD +I G D V
Sbjct: 73 ILKLGYHPTTITFSTL-------INGMCLKGKLKEALHFHDDVIGLGFHLD-------QV 118
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y ALI G C +G AL +LR + ++ + V YNI+I C+ + +AYEL +M
Sbjct: 119 SYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQM 178
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K+I VV SSL+ + G +++A+ L E+ T
Sbjct: 179 ILKKI--SPNVV------------TLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYT 224
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ I+ L K+ + +EAK ++ M+ + T TY+ L++ C +NE
Sbjct: 225 FTILIDALCKEGKIKEAKNVIAVMMKEGV--EPTVVTYNTLMDGYCLDNE---------- 272
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
V++A + + P+ Y +I C+ K VD+A N + M
Sbjct: 273 ------VNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEM 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 57/319 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + ++P+ T++ L I+A C G+ + N+ M+ GV P++V
Sbjct: 213 MLLKNINPNIYTFTIL-------IDALCKEGKIKEAKNVIAVMMKEGV-------EPTVV 258
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ GYC V +A + + + ++P+ SY I+I+G C+I+ +A EM
Sbjct: 259 TYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEM 318
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
V Y SL+ L Y+SL++
Sbjct: 319 H----CEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQ 374
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L ++I G T ++ I+GL K+ R A+ I ++ K TY
Sbjct: 375 VDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKG--YKVKVWTY 432
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+ +I G + GL EA + M PD Y +I +
Sbjct: 433 NTMIN---------------GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKN 477
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA + M+ G +
Sbjct: 478 DENDKAEKLLREMITRGLL 496
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P GTYS+L I Y + G+ + L D M+ +G P L TYN
Sbjct: 174 GFRPSTGTYSNL-------IKGYGIVGKSGEAMKLLDLMLTDG------NSKPDLQTYNM 220
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI C G + EA I+ MP G+ PD+V++N + G+ E +A + +EM K
Sbjct: 221 LIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRK- 279
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
GL +E ++ ++N Y +G +++A I G+ + +V
Sbjct: 280 --------------GLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNV 325
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
ING + E+L M K D + + ++ +
Sbjct: 326 LINGFVDRMDRDGVDEVLRLM-------KEFQIQPDVV----------TYSTIMNAWSQA 368
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
G + + D ML KPD Y+ L+ + R +KA + M+ G P++ +
Sbjct: 369 GFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTF 428
Query: 304 LALI 307
+I
Sbjct: 429 TNVI 432
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD +AY L+ Y E K L MI +GV P+ +V
Sbjct: 381 MLQSGVKPD-------VHAYSILVKGYVRSMETEKAEELLGDMIESGVRPN-------VV 426
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ +I G+ GR++ A+ I M E+G+SP+ ++ +I G+ + +P K+ E+ M
Sbjct: 427 TFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLM 486
Query: 121 DE 122
+E
Sbjct: 487 EE 488
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 53/246 (21%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------- 56
+G Y LI A C G S+ N+ +M +G+LPD VT +
Sbjct: 208 DGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETA 267
Query: 57 ---------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
P+ T+ ++ GY G+++EAL + + ++G P+ + +N++I
Sbjct: 268 EAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLI 327
Query: 102 SGFC-RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS------------------- 141
+GF R+ G L++ M E +I + + V Y ++M S
Sbjct: 328 NGFVDRMDRDGVDEVLRL-MKEFQI-QPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSG 385
Query: 142 ---DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D AYS L+ Y+ + EKA L ++ G VT + I+G R A
Sbjct: 386 VKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAI 445
Query: 199 EILLSM 204
+I M
Sbjct: 446 KIFDKM 451
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 124/331 (37%), Gaps = 61/331 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P+ T ++L IN CL G+ K HD +I G + V+
Sbjct: 129 ILKLGYQPNTVTLTTL-------INGLCLNGQIRKALYFHDHVIAKGFHLNHVS------ 175
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C G + AL +L + + PD V YN +I C+ + Y+L EM
Sbjct: 176 -YGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEM 234
Query: 121 DEKRILRMEEVVYESLMQGLS-----------------------------DEDAYSSLMN 151
+I + Y +L+ G S D YSSLM+
Sbjct: 235 IVNKI-HPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMD 293
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y ++ KA L ++ G + ++ INGL K EA + M S +
Sbjct: 294 GYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIP 353
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T TY++LI+ G G VS+ D M D YN L
Sbjct: 354 NT--VTYNSLID---------------GLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSL 396
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
C+ VD+A + ++ G P M+S
Sbjct: 397 FDGLCKNHQVDRAIALLKKIKDQGIQPSMYS 427
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 121/319 (37%), Gaps = 47/319 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + P+ TY++L + L GE K + MI V PD +V
Sbjct: 234 MIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPD-------IV 286
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GY + V +A + + G++P+ SYNI+I+G C+ + +A L EM
Sbjct: 287 TYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEM 346
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K ++ V Y SL+ GL +D Y+SL +
Sbjct: 347 HSKDMIP-NTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQ 405
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+++A L ++I G + ++ GL K R +A+E+ Y
Sbjct: 406 VDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEV-----------------Y 448
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
L + + K ++ G G EA M PDG Y +I
Sbjct: 449 RDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFES 508
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA M+ G +
Sbjct: 509 DRNDKAVKFIREMIARGLL 527
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 40/308 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+ PD T S L IN++C + + ++ +++ G P+ V
Sbjct: 94 MELKGIQPDIVTLSIL-------INSFCHLNQLNYAFSILGKILKLGY-------QPNTV 139
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T LI G C G++ +AL + G + VSY I+I+G C+ E A +L +E
Sbjct: 140 TLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQL-LEK 198
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +++ + V+Y +++ L + S Y L E+ + +T
Sbjct: 199 IKGFLVKPDVVMYNTIIDFLCKDKLVSD-------------GYDLYSEMIVNKIHPNVIT 245
Query: 181 ESVFINGLSKKARTREA-KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ I G S + +EA E+ K +I+ + + L+ G
Sbjct: 246 YNTLIYGFSILGQMKEAVGEV-----------KKARYVLAVMIKQRVEPDIVTYSSLMDG 294
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +T+ P+ YN +I C+ K VD+A N++ M +P+
Sbjct: 295 YFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPN 354
Query: 300 MFSVLALI 307
+ +LI
Sbjct: 355 TVTYNSLI 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 72 LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEV 131
L + A+ M G+ PD V+ +I+I+ FC + + A+ + +IL++
Sbjct: 81 LNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSI-----LGKILKLG-- 133
Query: 132 VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
Y+ + ++L+N G + KA + G+ V+ + INGL K
Sbjct: 134 -YQ------PNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKS 186
Query: 192 ARTREAKEILL---------------SMISNSCLSKTTHTTYDALIENCSNNEFKSLV-- 234
T+ A ++L ++I C K YD E N +++
Sbjct: 187 GETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITY 246
Query: 235 -ELVKGF----RMRGLVSEAARAH---DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
L+ GF +M+ V E +A M+ +PD Y+ L+ + K V+KA +
Sbjct: 247 NTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKH 306
Query: 287 MYTRMVHYGFVPHMFS 302
++ + G P++FS
Sbjct: 307 LFNTLSLRGVTPNVFS 322
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 124/331 (37%), Gaps = 61/331 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G P+ T ++L IN CL G+ K HD +I G + V+
Sbjct: 129 ILKLGYQPNTVTLTTL-------INGLCLNGQIRKALYFHDHVIAKGFHLNHVS------ 175
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI G C G + AL +L + + PD V YN +I C+ + Y+L EM
Sbjct: 176 -YGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEM 234
Query: 121 DEKRILRMEEVVYESLMQGLS-----------------------------DEDAYSSLMN 151
+I + Y +L+ G S D YSSLM+
Sbjct: 235 IVNKI-HPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMD 293
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y ++ KA L ++ G + ++ INGL K EA + M S +
Sbjct: 294 GYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIP 353
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T TY++LI+ G G VS+ D M D YN L
Sbjct: 354 NT--VTYNSLID---------------GLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSL 396
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
C+ VD+A + ++ G P M+S
Sbjct: 397 FDGLCKNHQVDRAIALLKKIKDQGIQPSMYS 427
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 121/319 (37%), Gaps = 47/319 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + P+ TY++L + L GE K + MI V PD +V
Sbjct: 234 MIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPD-------IV 286
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GY + V +A + + G++P+ SYNI+I+G C+ + +A L EM
Sbjct: 287 TYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEM 346
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
K ++ V Y SL+ GL +D Y+SL +
Sbjct: 347 HSKDMIP-NTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQ 405
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+++A L ++I G + ++ GL K R +A+E+ Y
Sbjct: 406 VDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEV-----------------Y 448
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
L + + K ++ G G EA M PDG Y +I
Sbjct: 449 RDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFES 508
Query: 279 KNVDKAYNMYTRMVHYGFV 297
DKA M+ G +
Sbjct: 509 DRNDKAVKFIREMIARGLL 527
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 40/308 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+ PD T S L IN++C + + ++ +++ G P+ V
Sbjct: 94 MELKGIQPDIVTLSIL-------INSFCHLNQLNYAFSILGKILKLGY-------QPNTV 139
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T LI G C G++ +AL + G + VSY I+I+G C+ E A +L +E
Sbjct: 140 TLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQL-LEK 198
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +++ + V+Y +++ L + S Y L E+ + +T
Sbjct: 199 IKGFLVKPDVVMYNTIIDFLCKDKLVSD-------------GYDLYSEMIVNKIHPNVIT 245
Query: 181 ESVFINGLSKKARTREA-KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ I G S + +EA E+ K +I+ + + L+ G
Sbjct: 246 YNTLIYGFSILGQMKEAVGEV-----------KKARYVLAVMIKQRVEPDIVTYSSLMDG 294
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + V++A +T+ P+ YN +I C+ K VD+A N++ M +P+
Sbjct: 295 YFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPN 354
Query: 300 MFSVLALI 307
+ +LI
Sbjct: 355 TVTYNSLI 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 72 LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEV 131
L + A+ M G+ PD V+ +I+I+ FC + + A+ + +IL++
Sbjct: 81 LNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSI-----LGKILKLG-- 133
Query: 132 VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
Y+ + ++L+N G + KA + G+ V+ + INGL K
Sbjct: 134 -YQ------PNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKS 186
Query: 192 ARTREAKEILL---------------SMISNSCLSKTTHTTYDALIENCSNNEFKSLV-- 234
T+ A ++L ++I C K YD E N +++
Sbjct: 187 GETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITY 246
Query: 235 -ELVKGF----RMRGLVSEAARAH---DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
L+ GF +M+ V E +A M+ +PD Y+ L+ + K V+KA +
Sbjct: 247 NTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKH 306
Query: 287 MYTRMVHYGFVPHMFS 302
++ + G P++FS
Sbjct: 307 LFNTLSLRGVTPNVFS 322
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 146/353 (41%), Gaps = 76/353 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G PD T++ + F + + + + ++M+ GV+PD L+
Sbjct: 167 MLGVGFCPDAATFNPVLVESFRKEDVW-------EAERVFNEMLQCGVVPD-------LI 212
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+++++I + G + AL M +GL PD V Y I+I+G+CR + A +++ EM
Sbjct: 213 SFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEM 272
Query: 121 DEKRILRMEEVVYESLMQGL--------SDE------------DAYS--SLMNDYLAQGD 158
E+ + M+ V Y +L+ GL +DE D Y+ +L++ Y G+
Sbjct: 273 VERSCV-MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 331
Query: 159 MEKAY---------------------ILDREI-AH--------DGYLSESVTESVFINGL 188
M KA ++ REI H +G+ S + I G
Sbjct: 332 MTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIKGY 391
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE---LVKGFRMRGL 245
+ +A + L +M+S TY+ LI N LV ++ GF G
Sbjct: 392 LRAGNVSKANDFLNTMVSEGVPPDCI--TYNTLI----NRLLPDLVTYNAILGGFSRHGR 445
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ EA M+ PD Y +I + N+ +A+ ++ M+ GFVP
Sbjct: 446 MQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVP 498
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 63/291 (21%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD Y+ L IN YC + S + ++M+ + D +VTYN
Sbjct: 241 GLVPDTVIYTIL-------INGYCRNNDVSGALKVRNEMVERSCVMD-------VVTYNT 286
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL------KM 118
L+ G C +++A + + M E G+ PD + +I G+C+ KA L +
Sbjct: 287 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRS 346
Query: 119 EMDEKRILRMEEVVYES---------LMQGLSDEDAYS-SLMNDYLAQGDMEKAYILDRE 168
EM++ + L + + E L+ G S SL+ YL G++ KA
Sbjct: 347 EMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNT 406
Query: 169 IAHDGYLSESVTESVFIN--------------GLSKKARTREAKEILLSMISNSC-LSKT 213
+ +G + +T + IN G S+ R +EA+ +L MI K+
Sbjct: 407 MVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 466
Query: 214 THTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
T+T+ ++ G+ + + EA R HD ML PD
Sbjct: 467 TYTS------------------VINGYVSKDNMKEAFRVHDEMLQRGFVPD 499
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 23/255 (9%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P L TYNALI G C G E A +L M +G PDA ++N V+ R
Sbjct: 139 PGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFR---------- 188
Query: 117 KMEMDEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
++ + E V E L G + D ++SS++ + G++ +A ++ G +
Sbjct: 189 -----KEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLV 243
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
++V ++ ING + A ++ M+ SC+ TY+ L+ C
Sbjct: 244 PDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDV--VTYNTLLNGLCRGKMLDDAD 301
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL-IVEHCRCKN-VDKAYNMYTRMV 292
EL K RG+ + T++HG K DG + L + E ++ ++KA ++ M+
Sbjct: 302 ELFKEMVERGVFPDFY-TLTTLIHGYCK-DGNMTKALSLFETITLRSEMEKAKELWRDMI 359
Query: 293 HYGFVPHMFSVLALI 307
PH S LI
Sbjct: 360 SREIFPHYISFSILI 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 36/203 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAY---------FSLINAYCLGGEFSKVSNLHDQMIHNGVLPD 51
M+ RG+ PD T ++L + Y SL L E K L MI + P
Sbjct: 307 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPH 366
Query: 52 FVTGSPSLVTYNALIYGYCFLGRVEEAL--GILRG------------MPEMGLSPDAVSY 97
+++ ++ LI G+C LG V E+L G LR M G+ PD ++Y
Sbjct: 367 YIS-------FSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITY 419
Query: 98 NIVISGFCRIREPGKAYELKMEMDEK--RILRMEEVVYESLMQGLS-DEDAYSSLMNDYL 154
N +I+ R+ Y + + R+ E V+++ + +G++ D+ Y+S++N Y+
Sbjct: 420 NTLIN---RLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYV 476
Query: 155 AQGDMEKAYILDREIAHDGYLSE 177
++ +M++A+ + E+ G++ +
Sbjct: 477 SKDNMKEAFRVHDEMLQRGFVPD 499
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 40/285 (14%)
Query: 24 INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILR 83
++ +C G + L + G+ + S+ +N+LI Y G ++A I
Sbjct: 469 VSWHCWAGRLDQAIKLLKDSLAMGL-------TFSVAAFNSLIAAYSREGLEDKAFEIYH 521
Query: 84 GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE 143
M + G +P A + N ++ G CR + +A L M EK L +++V
Sbjct: 522 IMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFL-IKKV------------ 568
Query: 144 DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLS 203
AY+ L + Y DM+ A + +E+ G + V S I+GLSK EA E+ L
Sbjct: 569 -AYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLE 627
Query: 204 MISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
M+S + + Y++LI C+ +++ K R+RGL+
Sbjct: 628 MLSIGFVPN--NFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLL---------------- 669
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD +N +I CR N+ A + + M G +P +F+ L+
Sbjct: 670 PDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILV 714
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 125/316 (39%), Gaps = 54/316 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P + LF F + G++ + +L MI G +PS +T+N
Sbjct: 247 GVRPSVTAMTILFKLLFRV-------GDYGTIWSLFKDMIRKG-------PAPSSITFNT 292
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC-----------------RI 107
+I G+C G+V + M + G PD +YN++I+G C R
Sbjct: 293 MICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRG 352
Query: 108 REPGKA---YELKMEMDEKRILRMEEVVYESLMQGLSDEDA-YSSLMNDYLAQGDMEKAY 163
EP + L E ++ ++ L G+ A Y+++M+ Y+ D+ +A
Sbjct: 353 CEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRAS 412
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+L +E+ G + VT ++F+ G K R + ++L + + YD +
Sbjct: 413 LLYKEMRIKGVPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDC--SLYDMTVS 470
Query: 224 -NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
+C ++L+K GL A +N LI + R D
Sbjct: 471 WHCWAGRLDQAIKLLKDSLAMGLTFSVA----------------AFNSLIAAYSREGLED 514
Query: 283 KAYNMYTRMVHYGFVP 298
KA+ +Y MV GF P
Sbjct: 515 KAFEIYHIMVKCGFTP 530
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 142/361 (39%), Gaps = 91/361 (25%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY+ + IN C+GG S M+ G PS+ T+N
Sbjct: 317 GCEPDVFTYNVI-------INGCCVGGNTSVAVGWLRLMMKRGC-------EPSVSTFNT 362
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM---- 120
+++ C G V EA + + +G+ P+ YN ++ G+ + R+ G+A L EM
Sbjct: 363 ILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKG 422
Query: 121 ----------------------DEKRIL--------------------------RMEEVV 132
D ++L R+++ +
Sbjct: 423 VPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAI 482
Query: 133 ---YESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+SL GL+ A++SL+ Y +G +KA+ + + G+ + T + + GL
Sbjct: 483 KLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGL 542
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTT--YDALIENCSNNEFKSLVELVKGFRMRGLV 246
+K + +EA+ +L M L K T +D + N+ + K + RG+
Sbjct: 543 CRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFK---MNDMDGARFMWKEMKERGIY 599
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLAL 306
PD ++ LI + NVD+AY ++ M+ GFVP+ F+ +L
Sbjct: 600 ----------------PDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSL 643
Query: 307 I 307
I
Sbjct: 644 I 644
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 53/306 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ SLI AY G K ++ M+ G +PS T N+L+ G C G+++EA
Sbjct: 499 AFNSLIAAYSREGLEDKAFEIYHIMVKCGF-------TPSASTCNSLLMGLCRKGKLQEA 551
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+L M E G V+Y ++ G+ ++ + A + EM E+ I + V + +L+
Sbjct: 552 RALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYP-DVVAFSALID 610
Query: 139 GLS-----DED-----------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GLS DE AY+SL+ + G M +A +++E+ G L
Sbjct: 611 GLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLP 670
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++ T ++ I+ ++ + A + L M + T++ L+
Sbjct: 671 DTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIF--TFNILVGG-----------Y 717
Query: 237 VKGFRMRGLVSEAARAHDT---MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
K F M RA D M PD YN + +C + +++A + +V
Sbjct: 718 CKAFDM-------VRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVS 770
Query: 294 YGFVPH 299
G VP+
Sbjct: 771 AGIVPN 776
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG+ PD +S+L I+ G + + +M+ G +P+ YN
Sbjct: 596 RGIYPDVVAFSAL-------IDGLSKAGNVDEAYEVFLEMLSIGFVPNNFA-------YN 641
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+LI G+C LGR+ +AL + + M GL PD ++NI+I FCR A + ++M
Sbjct: 642 SLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRI 701
Query: 124 RIL--------------------RMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKA 162
++ R +++V + GL D Y+ M+ Y + M +A
Sbjct: 702 GLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRA 761
Query: 163 YILDREIAHDGYLSESVTESVFINGLSK----KARTREAKEILLSMISN 207
+ E+ G + +VT + + G+ +A AK I + I N
Sbjct: 762 IAILDELVSAGIVPNTVTYNTVMGGICSDILDRAMIVTAKLIKMGFIPN 810
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 51/318 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y L+NAYC G+ +K ++M G+ PS VT+N LI +C G + +A
Sbjct: 359 SYNILVNAYCQKGDLNKGILTAEEMEKRGL-------KPSYVTFNTLINKFCETGDLNQA 411
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK--------------- 123
++ M E G+SP +YN +I+G+ + + +E+ E++ K
Sbjct: 412 ERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSLINC 471
Query: 124 -----RILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
++L E V+ + + +G+S + D Y+ L+ + + A+ E+ +G +
Sbjct: 472 LCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGIDAT 531
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE--NCSNNEFKSLVE 235
VT + ING+ K R EA+ + L M K TY++L+ S N K L E
Sbjct: 532 IVTYNTLINGIGKNGRVTEAENLFLHMTRKG--YKPDVITYNSLMSVYAMSGNPEKCL-E 588
Query: 236 LVKGFRMRGLVSEAARAH------------------DTMLHGNHKPDGGVYNFLIVEHCR 277
L + RG+ H ML PD VYN +I +
Sbjct: 589 LYDNMKKRGIKPSIGTFHPLINSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAE 648
Query: 278 CKNVDKAYNMYTRMVHYG 295
NV KA +++ +MV G
Sbjct: 649 DGNVLKAMSLHQQMVDQG 666
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T NAL+ G C +G+VE+A IL + G+ P VSYNI+++ +C+ + K EM
Sbjct: 324 TCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEM 383
Query: 121 DEKRILRMEEVVYESLM---------------------QGLSDE-DAYSSLMNDYLAQGD 158
EKR L+ V + +L+ +G+S + Y+SL+N Y D
Sbjct: 384 -EKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCD 442
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ + + EI + G + IN L K + +A+ +L M++ Y
Sbjct: 443 FVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGV--SPNADIY 500
Query: 219 DALIE-NCS----NNEFKSLVE---------------LVKGFRMRGLVSEAARAHDTMLH 258
+ LIE +CS + F+ L E L+ G G V+EA M
Sbjct: 501 NMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTR 560
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+KPD YN L+ + N +K +Y M G P + + LI
Sbjct: 561 KGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLI 609
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 117/317 (36%), Gaps = 86/317 (27%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+SP+ Y+ L I A C + ++MI NG+ ++V
Sbjct: 488 MVTRGVSPNADIYNML-------IEASCSLSKPKDAFRFLNEMIQNGI-------DATIV 533
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G GRV EA + M G PD ++YN ++S + P K EL M
Sbjct: 534 TYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNM 593
Query: 121 D-------------------EKRILRMEEVVYESL-MQGLSDEDAYSSLMNDYLAQGDME 160
+K ++ ME++ E L M+ + D Y+ ++ Y G++
Sbjct: 594 KKRGIKPSIGTFHPLINSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVL 653
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
KA L +++ G S+ VT + I + R E K IL M
Sbjct: 654 KAMSLHQQMVDQGIDSDKVTYNCLILAHLRDQRVSEIKHILDDM---------------- 697
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
+ +GLV P Y L+ HC K+
Sbjct: 698 --------------------KAKGLV----------------PKADTYKILVKGHCDLKD 721
Query: 281 VDKAYNMYTRMVHYGFV 297
+ AY Y M GF+
Sbjct: 722 FNGAYFWYREMFDSGFI 738
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 49/291 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y ++ C + + D+MI V+P+ VT+N LI GYC +G ++EA
Sbjct: 191 VYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPN-------TVTFNTLIDGYCKVGGIDEA 243
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M + V+YN ++SG C + A + +EM+ K L
Sbjct: 244 FRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFL------------ 291
Query: 139 GLSDEDAYSSLM-NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+SSL+ +D L G+ + +G + T + +NGL K + +A
Sbjct: 292 ----PRGFSSLVFDDQLMSGNENGL------LNGNGTQVDEWTCNALLNGLCKVGKVEKA 341
Query: 198 KEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
KEIL + SN + + +Y+ L+ C + + + RGL
Sbjct: 342 KEILAKLESNGVVP--SPVSYNILVNAYCQKGDLNKGILTAEEMEKRGL----------- 388
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
KP +N LI + C ++++A +M+ G P + + +LI
Sbjct: 389 -----KPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLI 434
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 55/320 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+SP TY+SL IN Y + +F + + +++ + G+ P++
Sbjct: 418 MIEKGVSPTLETYNSL-------INGYGMTCDFVRCFEIFEEIENKGM-------KPNVK 463
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y +LI C G++ +A +L M G+SP+A YN++I C + +P A+ EM
Sbjct: 464 SYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEM 523
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
+ I V Y +L+ G+ D Y+SLM+ Y G+
Sbjct: 524 IQNGI-DATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGN 582
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
EK L + G T IN KK K + M+ +
Sbjct: 583 PEKCLELYDNMKKRGIKPSIGTFHPLINSCRKKGVVTMEK-MFQEMLGMKLIP------- 634
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D + N E++ G+ G V +A H M+ D YN LI+ H R
Sbjct: 635 DRAVYN----------EMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNCLILAHLRD 684
Query: 279 KNVDKAYNMYTRMVHYGFVP 298
+ V + ++ M G VP
Sbjct: 685 QRVSEIKHILDDMKAKGLVP 704
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML L PD Y+ + I Y G K +LH QM+ G+ D V
Sbjct: 627 MLGMKLIPDRAVYNEM-------IYGYAEDGNVLKAMSLHQQMVDQGIDSD-------KV 672
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI + RV E IL M GL P A +Y I++ G C +++ AY EM
Sbjct: 673 TYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILVKGHCDLKDFNGAYFWYREM 732
Query: 121 DEKRILRMEEVVYESLMQGLSDED 144
+ + + + + L+ GL +E+
Sbjct: 733 FDSGFI-LNDCICSQLISGLREEE 755
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL- 59
M +G PD TY+SL ++ Y + G K L+D M G+ P T P +
Sbjct: 558 MTRKGYKPDVITYNSL-------MSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLIN 610
Query: 60 --------------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
YN +IYGY G V +A+ + + M + G+ D
Sbjct: 611 SCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSD 670
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE-DAYSSLMND 152
V+YN +I R ++R+ ++ ++ + +GL + D Y L+
Sbjct: 671 KVTYNCLILAHLR---------------DQRVSEIKHILDDMKAKGLVPKADTYKILVKG 715
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D AY RE+ G++ S I+GL ++ EA+
Sbjct: 716 HCDLKDFNGAYFWYREMFDSGFILNDCICSQLISGLREEEMLHEAE 761
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 45/228 (19%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++A C G+ NL M+ GV+PD +VTY +L+ GYC + V +A +
Sbjct: 210 LVDALCKEGDVKVAKNLLAVMMKEGVIPD-------VVTYGSLMDGYCLVNEVNKAKHVF 262
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL-- 140
+ +MG++PDA +Y+I+I+GFC+I+ +A L EM +R + V Y SL+ GL
Sbjct: 263 NIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEM-RRRGIAPNTVTYNSLIDGLCK 321
Query: 141 --------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+D Y+SL++ + K + +D+ I D Y T
Sbjct: 322 SGRIPYAWELVDTMHNNGQPADIFTYNSLID------ALCKNHHIDQGIQPDMY-----T 370
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
++ I+GL K R + A++I ++ + + DAL+ +N
Sbjct: 371 YNILIDGLCKGGRLKNAQDIFQDLL----IKEGLFDEVDALMSKMDDN 414
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 42/271 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I++ C L+ +MI + PD +VT+++LIYG+C +G+ ++A +
Sbjct: 139 TIIDSLCKDKLVLDAYGLYSEMIAKKIYPD-------VVTFSSLIYGFCIVGQFKDAFRL 191
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M ++ D ++NI++ C+ + A L M M+E V +
Sbjct: 192 FHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVM-------MKEGV-------IP 237
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D Y SLM+ Y ++ KA + I+ G ++ T S+ ING K EA +
Sbjct: 238 DVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLF 297
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M T TY++LI+ G G + A DTM H N
Sbjct: 298 DEMRRRGIAPNT--VTYNSLID---------------GLCKSGRIPYAWELVDTM-HNNG 339
Query: 262 KP-DGGVYNFLIVEHCRCKNVDKAY--NMYT 289
+P D YN LI C+ ++D+ +MYT
Sbjct: 340 QPADIFTYNSLIDALCKNHHIDQGIQPDMYT 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G++PD TYS + IN +C + +L D+M G+ +P+ VTYN+
Sbjct: 269 GVAPDAHTYSIM-------INGFCKIKMVDEALSLFDEMRRRGI-------APNTVTYNS 314
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G C GR+ A ++ M G D +YN +I C+ + + M
Sbjct: 315 LIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGIQPDM------ 368
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
++ + L +G ++A + + +G ++ L ++ +G + ++VT
Sbjct: 369 --YTYNILIDGLCKGGRLKNAQDIFQDLLIKEGLFDEVDALMSKMDDNGIIPDAVTYVTI 426
Query: 185 INGLSKKARTREAKEILLSMISNSCL 210
I L K +A+++L MI+ L
Sbjct: 427 IRALFHKDENEQAEKLLREMIARGLL 452
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C +G AL +LR + ++ + V +N +I C+ + AY L EM K+I
Sbjct: 110 CKMGETRAALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIY--- 166
Query: 130 EVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
D +SSL+ + G + A+ L E+ + T ++ ++ L
Sbjct: 167 -----------PDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALC 215
Query: 190 KKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEA 249
K+ + AK +L M+ + TY +L++ G+ + V++A
Sbjct: 216 KEGDVKVAKNLLAVMMKEGVIPDVV--TYGSLMD---------------GYCLVNEVNKA 258
Query: 250 ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + PD Y+ +I C+ K VD+A +++ M G P+ + +LI
Sbjct: 259 KHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLI 316
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI A C G+ ++ +M G PD + T+N+LIYG C ++EEA
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD-------IYTFNSLIYGLCKNDKMEEA 496
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
LG+ R M G+ + V+YN +I F R+ +A +L EM R ++ + Y L++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIK 555
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L G EK L ++ + + ++ IN + + +A
Sbjct: 556 ALC-------------KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ L MI TY++LI C F+ + L G + +G+
Sbjct: 603 QFLRDMIQRGLTPDIV--TYNSLINGLCKMGRFQEALNLFNGLQAKGI------------ 648
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI +C + A + + V GF+P+ + LI
Sbjct: 649 ----HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T++ + I+ C G D+M+ G P+++
Sbjct: 363 MVIAGFEPDAFTFNIM-------IDGLCKKGYLVSALEFLDEMVKKGF-------EPNVI 408
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+C G EEA ++ M GLS + V YN +I C+ + A ++ EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + + + SL+ GL D ME+A L R++ +G ++ +VT
Sbjct: 469 SSKGC-KPDIYTFNSLIYGLCKNDK-------------MEEALGLYRDMLLEGVIANTVT 514
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVE- 235
+ I+ + ++A +++ M C + TY+ LI + + + L+E
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ F G V++A + M+ PD YN LI C+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+A N++ + G P + LI
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG D TY+ L I A C G K L +QM + P S+
Sbjct: 538 MRFRGCPLDNITYNGL-------IKALCKTGATEKCLGLIEQMFGEEIFP-------SIN 583
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI +C G+V +AL LR M + GL+PD V+YN +I+G C++ +A L +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K I D Y++L++ Y +G A L + +G++ +T
Sbjct: 644 QAKGI--------------HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689
Query: 181 ESVFINGLSKK 191
S+ IN KK
Sbjct: 690 WSILINYFVKK 700
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 97/384 (25%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVS-NLHDQMIHNGVLPDFVTGSPSLV 60
+W G+ E T+ S +N ++ A G KV+ N+ M+ G+ SP++
Sbjct: 155 MW-GVYCFEPTFKS-YNVVLEILVA----GNCPKVAPNVFYDMLSRGI-------SPTVY 201
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPE--------------------------------- 87
T+ ++ +C + V+ A +LR M +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 88 --MGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
MG PD ++N VI G C RI E K ++ + D + ++ LM GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD----FTADALIQGYLMHGLCR 317
Query: 142 ----DED-------------AYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESV 183
DE Y++L+N Y+ G E+A +L + + G+ ++ T ++
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
I+GL KK A E L M+ + TY LI+ C F+ ++V
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 243 RGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+GL + +A + + M KPD +N LI C+ +++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A +Y M+ G + + + LI
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLI 519
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 45/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ P+ TY+SL + YF L E +K + + + + GV +P L
Sbjct: 158 MIKQGVEPNVVTYTSLMDGYF-------LVKEVNKATYIFNTIAQRGV-------TPELH 203
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G C V EA + + M ++PD +SYN +I G C+ ++L EM
Sbjct: 204 SYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEM 263
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
R + + Y SL+ L ++KA L +++ G T
Sbjct: 264 -HNRCQPVNVITYNSLLDALCKNH-------------QVDKAIALLKKMKDQGIQPNMYT 309
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++GL K R +A+EI +++ + Y+ ++ NEF
Sbjct: 310 YTILVDGLCKNGRLADAREIYHDLLTKG--YPLNVSMYNVMV-----NEFCK-------- 354
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
GL EA M PD Y LI DKA + M+ G +
Sbjct: 355 --EGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVRGLL 409
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 47/294 (15%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G K+++ H +I L + +V N L+ +C LG++ A +L + +MG
Sbjct: 51 GSLVKINHFH-TVISLSRLIELRGIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGY 109
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED------ 144
PD V+ +I G CR G+ E +++ V+Y +++ L +
Sbjct: 110 QPDTVTLTTLIKGLCR---SGQI--------EGLLVKPNVVMYSTIIDSLCKDKLSGAVM 158
Query: 145 ----------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
Y+SLM+ Y ++ KA + IA G E + +V INGL K
Sbjct: 159 IKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMV 218
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
EA + M S + T +Y++LI+ G G +S+ D
Sbjct: 219 NEAANLFKDMHSRNMTPDT--ISYNSLID---------------GLCKSGSISDVWDLID 261
Query: 255 TMLHGNHKPDGGV-YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M H +P + YN L+ C+ VDKA + +M G P+M++ L+
Sbjct: 262 EM-HNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILV 314
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 146/325 (44%), Gaps = 56/325 (17%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
L ++ TYS L N +F G + +++ M +G++P+ + TY+++
Sbjct: 230 LVANQHTYSVLINGFFK-------QGLQKEGFQMYESMKLSGIVPN-------VYTYSSV 275
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
I YC G +++A + M E ++ ++YN++I+G CR+++ G+A +L ++ R+
Sbjct: 276 IGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVN--RV 333
Query: 126 -LRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGDMEKA 162
LR Y +L++G D + Y++L+ Y G++ A
Sbjct: 334 GLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGA 393
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L +E+ VT ++ +NG + +A EI S++ S L + TY LI
Sbjct: 394 LNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEI-HSLMEKSGLVSDVY-TYGVLI 451
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
G M G + EA++ ++ N +P+ +Y+ LI +C+ N
Sbjct: 452 H---------------GLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCY 496
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
+A + M+ G VP++ S + I
Sbjct: 497 RALRLLNEMIGKGMVPNVASFCSTI 521
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY++L I YC + L++++ NG+ SP++VTYN
Sbjct: 334 GLRPNIFTYNTL-------IKGYCDAEKIDTAVRLYNELKSNGL-------SPTVVTYNT 379
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI GY +G + AL +++ M E ++P V+Y I+++GF RI KA+E+ M EK
Sbjct: 380 LIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLM-EKS 438
Query: 125 ILRMEEVVYESLMQGL----SDEDA------------------YSSLMNDYLAQGDMEKA 162
L + Y L+ GL S ++A Y +L++ Y +G+ +A
Sbjct: 439 GLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRA 498
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
L E+ G + + I L K + +EA+ +L M++
Sbjct: 499 LRLLNEMIGKGMVPNVASFCSTIGLLCKDEKLKEAEVVLQHMVN 542
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 47/290 (16%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
++ +I G C G + ++ +L M + GLSP+ V Y +I G C+ + A +L +M
Sbjct: 166 SFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKM 225
Query: 121 DEKRILRMEEVVYESLM-----QGLSDED-----------------AYSSLMNDYLAQGD 158
++ + Y L+ QGL E YSS++ +Y G
Sbjct: 226 KGLDLVANQH-TYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVIGEYCNDGS 284
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA+ + E+ +T ++ INGL + + EA ++ + N + TY
Sbjct: 285 IDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRV--NRVGLRPNIFTY 342
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG------------------ 259
+ LI+ C + + V L + GL S ++T++ G
Sbjct: 343 NTLIKGYCDAEKIDTAVRLYNELKSNGL-SPTVVTYNTLIAGYSKVGNLAGALNLVKEME 401
Query: 260 --NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N P Y L+ R ++KA+ +++ M G V +++ LI
Sbjct: 402 ERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLI 451
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 133/323 (41%), Gaps = 52/323 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG P+ T ++L + YCL G L D + G D +
Sbjct: 286 MVNRGYEPNIVTCTAL-------MGGYCLKGNVDMARELFDAIGEWGFKRD-------VW 331
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN I+GYC +GRV +A+ + M G+ P+ V+YN +I C+ E A+E+ M
Sbjct: 332 TYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTM 391
Query: 121 DEKRIL-----------------RMEEVV--YESLMQ-GLS-DEDAYSSLMNDYLAQGDM 159
+ R+++ + + L++ GL+ D +Y+ L++ M
Sbjct: 392 HRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRM 451
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
+A L R++ + VT S I+GL + R A +L M L T TY
Sbjct: 452 GEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT--ITYS 509
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L++ + + EA + M+ +PD Y +I +C+ +
Sbjct: 510 ILLD---------------ALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 554
Query: 280 NVDKAYNMYTRMVHYGFVPHMFS 302
+D+A N++ M VP + +
Sbjct: 555 RIDEAINLFREMHMKNLVPDIVT 577
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 141/355 (39%), Gaps = 71/355 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGE 32
M+ G+ P+E TY SL + LI+ C G
Sbjct: 216 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 275
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + D+M++ G P++VT AL+ GYC G V+ A + + E G
Sbjct: 276 LVEAREMFDEMVNRGY-------EPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 328
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D +YN+ I G+C++ A + +E+ E ++ + Y+SL++
Sbjct: 329 DVWTYNVFIHGYCKVGRVRDAVRV-----------FDEMCREGVVPNIV---TYNSLIDC 374
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G++ A+ + + + G + VT + ++GL K R +A +L + + S L+
Sbjct: 375 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI-LLFNQLVESGLTP 433
Query: 213 TTHTTYDALIENCSNNE-------------FKSLVE-------LVKGFRMRGLVSEAARA 252
+Y LI C + K+LV L+ G G +S A R
Sbjct: 434 DV-WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRL 492
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ M PD Y+ L+ + +++D+A ++ +M+ G P + +I
Sbjct: 493 LNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMI 547
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C G + +++M+ NGV P+ TY +LI G C +G+ E
Sbjct: 193 YSIVIDCLCRNGFVDEGFEFYNEMMGNGV-------CPNEFTYGSLIRGLCGVGKFLEGF 245
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G++ M GL + ++I G C+ G E + DE M YE
Sbjct: 246 GLVDEMIRRGLDVSVYVFTVLIDGLCK---NGMLVEAREMFDE-----MVNRGYE----- 292
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ ++LM Y +G+++ A L I G+ + T +VFI+G K R R+A
Sbjct: 293 -PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVR 351
Query: 200 ILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M + TY++LI+ C E E+VK GL
Sbjct: 352 VFDEMCREGVVPNI--VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT------------ 397
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD L+ C+ K +D+A ++ ++V G P ++S LI
Sbjct: 398 ----PDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 442
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 46/294 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+++ C+ G K HD++++NG S + V+Y LI G C GRV EA+ +
Sbjct: 117 TVLKGLCVNGGVLKALEFHDEIVNNGF-------SLNEVSYGILINGLCENGRVNEAVNL 169
Query: 82 LRGMPEMG--------LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY 133
LR + + + + V Y+IVI CR + +E EM + E Y
Sbjct: 170 LRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCP-NEFTY 228
Query: 134 ESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
SL++GL G + + L E+ G +V I+GL K
Sbjct: 229 GSLIRGLC-------------GVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 275
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH 253
EA+E+ M++ Y+ I C+ L+ G+ ++G V A
Sbjct: 276 LVEAREMFDEMVNRG---------YEPNIVTCT--------ALMGGYCLKGNVDMARELF 318
Query: 254 DTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D + K D YN I +C+ V A ++ M G VP++ + +LI
Sbjct: 319 DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 372
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 136/306 (44%), Gaps = 55/306 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY +LI +C G+ + QM + G LP+ + TYN LIYG+C ++ A
Sbjct: 315 AYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPN-------VDTYNILIYGFCESRMLDLA 367
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYES 135
L + M G++ + V+++ +I G C RI + EL E E + Y S
Sbjct: 368 LDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISP--YNS 425
Query: 136 LMQGLSDEDAYSSLMNDYLA---------------------QGDMEKAY-ILDREIAHDG 173
++ GL ++ + +++LA +G +E A I D+ I G
Sbjct: 426 IIYGLFKQNRFDE-ASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGG 484
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-ENCSNNEFKS 232
S V S+ ++G S+ REA E++ MISN+C +T++A+I E C + +S
Sbjct: 485 IPSILVYNSL-VHGFSQHGSIREAVELINEMISNNCFP--IASTFNAIITEFCEQGKIES 541
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
++ ++ RG V P+ Y+ LI CR ++ KA ++ MV
Sbjct: 542 ALKFMEDITARGCV----------------PNTETYSPLIDVLCRKGDIQKALQVFLEMV 585
Query: 293 HYGFVP 298
G +P
Sbjct: 586 EKGILP 591
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 132/367 (35%), Gaps = 72/367 (19%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIH-NGVLPDFVTGS------- 56
G++P+ Y++L ++A C G+ + +L ++M+ N V + + S
Sbjct: 207 GVTPNTVIYNTL-------LHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENL 259
Query: 57 ----------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIV 100
P +VT ++ C GRV EA +L + +G S DAV+YN +
Sbjct: 260 VQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTL 319
Query: 101 ISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE---DAYSSLMNDYLAQG 157
I GFC + + +M+ K L + Y L+ G + D L ND G
Sbjct: 320 IKGFCGVGKVKVGLHFLKQMENKGYLPNVD-TYNILIYGFCESRMLDLALDLFNDMKTDG 378
Query: 158 DMEKAYILDREI--------AHDGY----LSESVTE---------SVFINGLSKKARTRE 196
D I DG+ L E E + I GL K+ R E
Sbjct: 379 INRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDE 438
Query: 197 AKEILLSM-------------ISNSCLS---KTTHTTYDALIENCSNNEFKSLVELVKGF 240
A E L M I C + YD +I+ LV GF
Sbjct: 439 ASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGF 498
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G + EA + M+ N P +N +I E C ++ A + G VP+
Sbjct: 499 SQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNT 558
Query: 301 FSVLALI 307
+ LI
Sbjct: 559 ETYSPLI 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 28 CLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE 87
C G N++D+MI G G PS++ YN+L++G+ G + EA+ ++ M
Sbjct: 464 CKEGAIEDAKNIYDKMIDEG-------GIPSILVYNSLVHGFSQHGSIREAVELINEMIS 516
Query: 88 MGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS 147
P A ++N +I+ FC E GK E + ME++ + + + YS
Sbjct: 517 NNCFPIASTFNAIITEFC---EQGKI--------ESALKFMEDITARGC---VPNTETYS 562
Query: 148 SLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
L++ +GD++KA + E+ G L +
Sbjct: 563 PLIDVLCRKGDIQKALQVFLEMVEKGILPDQ 593
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ L+ G C R+ E +L+ + G++P+ V YN ++ CR + G+A L EM
Sbjct: 179 TFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM 238
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +E ++ L++ Y + ++ +A +L + + + VT
Sbjct: 239 VD------------------PNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVT 280
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ + L R EA E+L + ++ + DA+ N L+KGF
Sbjct: 281 VTKVVEILCNAGRVTEAAEVLERV-------ESLGGSLDAVAYN----------TLIKGF 323
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G V M + + P+ YN LI C + +D A +++ M
Sbjct: 324 CGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDM 374
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
DEG S+ Y SL++ + G + L ++MI N P T+NA+I
Sbjct: 481 DEGGIPSIL-VYNSLVHGFSQHGSIREAVELINEMISNNCFP-------IASTFNAIITE 532
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
+C G++E AL + + G P+ +Y+ +I CR + KA ++ +EM EK IL
Sbjct: 533 FCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGIL 590
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 47/289 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P+ T++ + + GE+ + D+M+ V PS+V+YN+
Sbjct: 177 GFRPNTVTFNIMMKGWLK-------KGEWENACKVFDEMLERKV-------QPSVVSYNS 222
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G +++A+ ++ M G + V+Y +++ G C + + +A +L +M
Sbjct: 223 LIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDM---- 278
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L + +S LMND +G +++A +L RE+ + VT +VF
Sbjct: 279 -------AYRGCKPQLVN---FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVF 328
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR 243
+N L K+ +T EA ++L+ M + C + TY L++ C N +F+S + ++
Sbjct: 329 VNYLCKEGKTAEAYKMLVEMQISGC--EPNAATYRMLLDGLCRNGDFESGLSVL------ 380
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
+ M H P +N L+V + N+D Y + MV
Sbjct: 381 ----------NLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 47/289 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P+ T++ + + GE+ + D+M+ V PS+V+YN+
Sbjct: 177 GFRPNTVTFNIMMKGWLK-------KGEWENACKVFDEMLERKV-------QPSVVSYNS 222
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G +++A+ ++ M G + V+Y +++ G C + + +A +L +M
Sbjct: 223 LIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDM---- 278
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L + +S LMND +G +++A +L RE+ + VT +VF
Sbjct: 279 -------AYRGCKPQLVN---FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVF 328
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR 243
+N L K+ +T EA ++L+ M + C + TY L++ C N +F+S + ++
Sbjct: 329 VNYLCKEGKTAEAYKMLVEMQISGC--EPNAATYRMLLDGLCRNGDFESGLSVL------ 380
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
+ M H P +N L+V + N+D Y + MV
Sbjct: 381 ----------NLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 47/289 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P+ T++ + + GE+ + D+M+ V PS+V+YN+
Sbjct: 177 GFRPNTVTFNIMMKGWLK-------KGEWENACKVFDEMLERKV-------QPSVVSYNS 222
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G +++A+ ++ M G + V+Y +++ G C + + +A +L +M
Sbjct: 223 LIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDM---- 278
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L + +S LMND +G +++A +L RE+ + VT +VF
Sbjct: 279 -------AYRGCKPQLVN---FSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVF 328
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR 243
+N L K+ +T EA ++L+ M + C + TY L++ C N +F+S + ++
Sbjct: 329 VNYLCKEGKTAEAYKMLVEMQISGC--EPNAATYRMLLDGLCRNGDFESGLSVL------ 380
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
+ M H P +N L+V + N+D Y + MV
Sbjct: 381 ----------NLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 54/294 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + ++P+ T+++L ++ C GE K N+ MI V P++V
Sbjct: 114 MTSKTVTPNIRTFTTL-------VDGLCKDGEVKKARNVLAIMIKQRV-------EPNIV 159
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ GY + V +A + + G++P+ SY ++I+G C+ + +A L EM
Sbjct: 160 TYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEM 219
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
K ++ + V Y SL+ GL Y+SL++
Sbjct: 220 HSKNMVP-DTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQ 278
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++KA L +I + G T ++ ++GL K R R+A+E+ Y
Sbjct: 279 VDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEV-----------------Y 321
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
L+ + + ++ G G + EA M PDG Y I
Sbjct: 322 QDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITI 375
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 52/302 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY------------ 67
Y ++I+ C S +L+ +MI + PD +VTYN LIY
Sbjct: 42 YNTIIDILCKDKLVSDGCDLYSEMIDKKIYPD-------VVTYNTLIYSLLNFVYIKIRK 94
Query: 68 --GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
G+ LG+++EA+G+L M ++P+ ++ ++ G C+ E KA + M ++R+
Sbjct: 95 EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+V Y+SLM+ Y ++ KA L I+ G + V I
Sbjct: 155 --EPNIV------------TYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMI 200
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
NGL K EA + M S + + T Y++LI+ L K R+ +
Sbjct: 201 NGLCKNKMVDEAANLFKEMHSKNMVPDT--VAYNSLIDG-----------LCKSRRIYDV 247
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
HD + YN L+ C+ VDKA + T++ + G P++++
Sbjct: 248 WDFIGEMHDR----GQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTI 303
Query: 306 LI 307
L+
Sbjct: 304 LV 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 31/252 (12%)
Query: 68 GYCFLGRVEEALGI----------LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
G C G V +AL L + + + PD V YN +I C+ + +L
Sbjct: 3 GLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLY 62
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDY--LAQGDMEKAYILDREIAHDGYL 175
EM +K+I + V Y +L+ L + Y + +Y G M++A L ++
Sbjct: 63 SEMIDKKIYP-DVVTYNTLIYSLLNF-VYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
T + ++GL K ++A+ +L MI + TY++L++
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV--EPNIVTYNSLMD------------ 166
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G+ + V++A + +T+ P+ Y +I C+ K VD+A N++ M
Sbjct: 167 ---GYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKN 223
Query: 296 FVPHMFSVLALI 307
VP + +LI
Sbjct: 224 MVPDTVAYNSLI 235
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+W + ++ + + Y +LI+ C GG+ ++++M+ GV D +VT
Sbjct: 280 IWERMKMNDWKHDAF--TYSALIHGLCEGGDLDGARKVYEEMVLRGVKAD-------VVT 330
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKM 118
NA++ G C G+V+E+ + M G S + VSYN+ + G ++ E +E+
Sbjct: 331 CNAMLNGLCKAGKVDESFELWEEMGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLR 389
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
EMD +E Y L+ GL ++ Y + L D DR D + S
Sbjct: 390 EMD----CDVESTTYGILVHGLC-KNGYVTKALRVLEGAD-------DRGDDVDAFAYSS 437
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
+ INGL ++ R EA ++L M C K Y+ALI+
Sbjct: 438 M-----INGLCREGRLDEAAKVLNLMDKRGC--KLNAHVYNALID--------------- 475
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
GF V A + M P+ YN +I CR + +AY+ M+ G+ P
Sbjct: 476 GFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKP 535
Query: 299 HMFSVLALI 307
+ + LI
Sbjct: 536 DLITYSTLI 544
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 43/292 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY S+IN C G + + + + M G + YNALI G+ +V+ A
Sbjct: 434 AYSSMINGLCREGRLDEAAKVLNLMDKRGC-------KLNAHVYNALIDGFMKNNKVDSA 486
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + R M G SP+ V+YNIVI+GFCR +AY EM EK + + + Y +L+
Sbjct: 487 VQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKG-WKPDLITYSTLID 545
Query: 139 GLSDEDAYSSLMNDYLAQGDM---EKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
G L QG M + A L + G+ + ++ I+ L + +
Sbjct: 546 G--------------LCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQ 591
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
A ++ M +C + TH T +++GF G +A++
Sbjct: 592 YALQLYWMMRKRNCANLVTHNT------------------IMEGFYKIGDCEKASKIWAQ 633
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ KPD YN + C V A + G +P + + L+
Sbjct: 634 ISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILV 685
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
TY L++G C G V +AL +L G + G DA +Y+ +I+G CR +A ++
Sbjct: 398 TTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNL 457
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
MD KR ++ VY +L+ G ++ ++ A + RE++ +G V
Sbjct: 458 MD-KRGCKLNAHVYNALIDG-------------FMKNNKVDSAVQVFREMSTNGCSPNVV 503
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN---NEFKSLVEL 236
T ++ ING + R EA + M+ K TY LI+ NE + + L
Sbjct: 504 TYNIVINGFCRAERFPEAYHCVEEMLEKG--WKPDLITYSTLIDGLCQGKMNENDTALRL 561
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
F +G KPD ++N +I C V A +Y M
Sbjct: 562 CYQFLAKGF----------------KPDITMHNIVIHRLCSSGKVQYALQLYWMM 600
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
++ +L+NA+ ++ + GV PS+ TYN L+ C G +A
Sbjct: 119 SFNTLLNAFAESHQWDRAEKFFAYFETAGV-------EPSVQTYNVLMKVLCKKGEFLKA 171
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ M +G+ PD +Y +I+ F +IR+ A E+ EM E+ +
Sbjct: 172 KKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGV------------- 218
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYIL-DREIAHDGYLSESVTESVFINGLSKKARTREA 197
D Y+ +++ + GD K ++ +R + + V+ ++ I+GL + R +E+
Sbjct: 219 -EPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKES 277
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
EI M N K TY ALI L +G + G A + ++ M+
Sbjct: 278 LEIWERMKMND--WKHDAFTYSALIHG-----------LCEGGDLDG----ARKVYEEMV 320
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
K D N ++ C+ VD+++ ++ M + G
Sbjct: 321 LRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG 358
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+W + ++ + + Y +LI+ C GG+ ++++M+ GV D +VT
Sbjct: 280 IWERMKMNDWKHDAF--TYSALIHGLCEGGDLDGARKVYEEMVLRGVKAD-------VVT 330
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKM 118
NA++ G C G+V+E+ + M G S + VSYN+ + G ++ E +E+
Sbjct: 331 CNAMLNGLCKAGKVDESFELWEEMGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLR 389
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
EMD +E Y L+ GL ++ Y + L D DR D + S
Sbjct: 390 EMD----CDVESTTYGILVHGLC-KNGYVTKALRVLEGAD-------DRGDDVDAFAYSS 437
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
+ INGL ++ R EA ++L M C K Y+ALI+
Sbjct: 438 M-----INGLCREGRLDEAAKVLNLMDKRGC--KLNAHVYNALID--------------- 475
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
GF V A + M P+ YN +I CR + +AY+ M+ G+ P
Sbjct: 476 GFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKP 535
Query: 299 HMFSVLALI 307
+ + LI
Sbjct: 536 DLITYSTLI 544
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 43/292 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY S+IN C G + + + + M G + YNALI G+ +V+ A
Sbjct: 434 AYSSMINGLCREGRLDEAAKVLNLMDKRGC-------KLNAHVYNALIDGFMKNNKVDSA 486
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + R M G SP+ V+YNIVI+GFCR +AY EM EK + + + Y +L+
Sbjct: 487 VQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKG-WKPDLITYSTLID 545
Query: 139 GLSDEDAYSSLMNDYLAQGDM---EKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
G L QG M + A L + G+ + ++ I+ L + +
Sbjct: 546 G--------------LCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQ 591
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
A ++ M +C + TH T +++GF G +A++
Sbjct: 592 YALQLYWMMRKRNCANLVTHNT------------------IMEGFYKIGDCEKASKIWAQ 633
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ KPD YN + C V A + G +P + + L+
Sbjct: 634 ISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILV 685
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
TY L++G C G V +AL +L G + G DA +Y+ +I+G CR +A ++
Sbjct: 398 TTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNL 457
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
MD KR ++ VY +L+ G ++ ++ A + RE++ +G V
Sbjct: 458 MD-KRGCKLNAHVYNALIDG-------------FMKNNKVDSAVQVFREMSTNGCSPNVV 503
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN---NEFKSLVEL 236
T ++ ING + R EA + M+ K TY LI+ NE + + L
Sbjct: 504 TYNIVINGFCRAERFPEAYHCVEEMLEKG--WKPDLITYSTLIDGLCQGKMNENDTALRL 561
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
F +G KPD ++N +I C V A +Y M
Sbjct: 562 CYQFLAKGF----------------KPDITMHNIVIHRLCSSGKVQYALQLYWMM 600
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
++ +L+NA+ ++ + GV PS+ TYN L+ C G +A
Sbjct: 119 SFNTLLNAFAESHQWDRAEKFFAYFETAGV-------EPSVQTYNVLMKVLCKKGEFLKA 171
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ M +G+ PD +Y +I+ F +IR+ A E+ EM E+ +
Sbjct: 172 KKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGV------------- 218
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYIL-DREIAHDGYLSESVTESVFINGLSKKARTREA 197
D Y+ +++ + GD K ++ +R + + V+ ++ I+GL + R +E+
Sbjct: 219 -EPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKES 277
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
EI M N K TY ALI L +G + G A + ++ M+
Sbjct: 278 LEIWERMKMND--WKHDAFTYSALIHG-----------LCEGGDLDG----ARKVYEEMV 320
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
K D N ++ C+ VD+++ ++ M + G
Sbjct: 321 LRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG 358
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C ++ L+ QMI V SP +VT++ALIYG+C +G+ +EA
Sbjct: 191 YSTIIDSLCKEKLVTEAYELYSQMIVKKV-------SPDVVTFSALIYGFCMVGQFKEAF 243
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK----MEMDEKRILRMEEVVYES 135
G+ M ++PD ++NI++ C+ G E K + M E + + V+
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCK---EGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300
Query: 136 LMQGLSDEDAYS-SLMNDYLAQGDM-EKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
+ + D +S +++ L + M ++A L E+ G + VT S I+GL K R
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARA 252
A E+L M + TY + + C N++ V LVK + +G+
Sbjct: 361 ISHAWELLDQMHARG--QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI------- 411
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+P+ YN LI C+ + A ++ ++ G+
Sbjct: 412 ---------QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGY 446
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 28/291 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++L I CL G+ + + HD +I G + V
Sbjct: 109 ILKMGYHPDTITLTTL-------IKGLCLNGKVHEALHFHDHVIARGF-------RLNEV 154
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G C +G AL +LR + ++ + V Y+ +I C+ + +AYEL +M
Sbjct: 155 SYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQM 214
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K++ D +S+L+ + G ++A+ L E+ + T
Sbjct: 215 IVKKV--------------SPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ++ L K+ T+E K +L M+ ++ + + + S ++K
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+V EA + M PD Y+ LI C+ + + A+ + +M
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+PS+VT+N +I YC LG ++ A +L + +MG PD ++ +I G C GK +E
Sbjct: 80 TPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCL---NGKVHE 136
Query: 116 LKMEMDE--KRILRMEEVVYESLMQGL----------------------SDEDAYSSLMN 151
D R R+ EV Y L+ GL ++ YS++++
Sbjct: 137 ALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIID 196
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA----KEILLSMIS- 206
+ + +AY L ++ + VT S I G + +EA E++L+ I+
Sbjct: 197 SLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINP 256
Query: 207 NSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+ C T + DAL + S E K+++ ++ + V++A + + PD
Sbjct: 257 DVC---TFNILVDALCKEGSTKETKNVLAVM--MKEVNQVNKAKHVFNIIGKRRVTPDVH 311
Query: 267 VYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
Y +I C+ K VD+A +++ M G P + +LI
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLI 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 78/316 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ + +SPD T+S+L I +C+ G+F + L +M+ + PD T
Sbjct: 214 MIVKKVSPDVVTFSAL-------IYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266
Query: 55 -----GS----------------------------------PSLVTYNALIYGYCFLGRV 75
GS P + +Y +I C + V
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326
Query: 76 EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYES 135
+EAL + M G++PD V+Y+ +I G C+ A+EL +M R + + Y S
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM-HARGQPADVITYTS 385
Query: 136 LMQGLSDE----------------------DAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+ L + Y+ L++ +G E A ++ +++ G
Sbjct: 386 FLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKG 445
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC-SNNEFKS 232
Y T ++ INGL + EA +L M N C TY+ +I N+E
Sbjct: 446 YKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDV--VTYETIIRALFKNDENHK 503
Query: 233 LVELVKGFRMRGLVSE 248
+L++ RGL+ E
Sbjct: 504 AEKLLREMIARGLLEE 519
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 60/325 (18%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG+ P+ +YS+L +N C G+ + L +QM+ G+ PD +V+YN
Sbjct: 327 RGVVPNLISYSAL-------MNGLCKEGKIKEAHQLFNQMVQRGIDPD-------VVSYN 372
Query: 64 ALIYGYCFLG-RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
LI GYC G +++ +L M +G+ PD V+ IV G+ RE L M +
Sbjct: 373 TLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGY--TREGKLLSALNMVAEL 430
Query: 123 KRI-LRMEEVVYESLMQGLSDE-----------------------DAYSSLMNDYLAQGD 158
+R +++ E +Y+ L+ L E Y L + +
Sbjct: 431 QRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNN 490
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+E+A IL E+A T I+ L + RT EA+ +L M+S L
Sbjct: 491 VEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLE--IK 548
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
ALI C N+ V L+K F ++ + +DT YN ++ C
Sbjct: 549 RALINGYCEENDVDKAVSLLKFF------AKEFQVYDT----------ESYNAIVKVFCE 592
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFS 302
NV + + ++V G+VP+ +
Sbjct: 593 VGNVAELMELQDKLVKIGYVPNSLT 617
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 47/291 (16%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N + + C G ++ G L M E G PD V+YNI+I+G+C+ R A+ L M
Sbjct: 265 TFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIM 324
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQ-G 157
+ ++ + Y +LM GL E +Y++L++ Y + G
Sbjct: 325 GIRGVVP-NLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGG 383
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
M+ L E+ G ++VT + G +++ + A ++ + K
Sbjct: 384 KMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGI--KIPENL 441
Query: 218 YD-ALIENCSNN--------------------EFKSLVELVKGFRMRGLVSEAARAHDTM 256
YD L+ C E + ++L + V EA M
Sbjct: 442 YDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEM 501
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ K + Y +I CR K +A N+ MV G +P + ALI
Sbjct: 502 AKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALI 552
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGV-LPDFVTGSPSL 59
M+ + ++P+ T++ L ++A C G+ + N+ +M+ + L + P+
Sbjct: 343 MVLKNINPNVYTFNIL-------VDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNT 395
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+YN LI G+C GR+ A +L M + G P+ ++YN ++ C+ KA L
Sbjct: 396 VSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNN 455
Query: 120 MDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ QG+ D Y++L++ QG ++ A ++ +++ GY +
Sbjct: 456 FKD---------------QGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPT 500
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSLVEL 236
T ++ INGL + EA+ +L M N C+ T T AL E N++ + +L
Sbjct: 501 WTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAE---KL 557
Query: 237 VKGFRMRGLV 246
V+ +RGL+
Sbjct: 558 VRELIVRGLL 567
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 126/317 (39%), Gaps = 57/317 (17%)
Query: 4 RGLSPDEGTYSSLFNAYF-------------SLINAYCLGGEFSKVSNLHDQMIHNGVLP 50
+G+ PD T S L N Y+ +LI CL G+ ++ HD ++ G
Sbjct: 200 KGVKPDLFTLSILINCYYFKMGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHL 259
Query: 51 DFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
+ VT Y LI G C +G+ AL +LR + ++ + V Y+ VI G C+ +
Sbjct: 260 NHVT-------YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLV 312
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
AY L EM KRI VV KA+ L E+
Sbjct: 313 IDAYGLYSEMIVKRI--PPTVV--------------------------TFKAFSLFHEMV 344
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEF 230
T ++ ++ L K + +EAK +++ M+ + L+ T +C N
Sbjct: 345 LKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEA-LNLFTEM-------HCKPNTV 396
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
S L+ GF G +S A + D M P+ YN L+ C+ +VDKA +
Sbjct: 397 -SYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNN 455
Query: 291 MVHYGFVPHMFSVLALI 307
G P M + L+
Sbjct: 456 FKDQGIQPDMHTYNTLV 472
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 47/305 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
R L P++ +Y+ L ++AYC G++ S++ ++ G PD LV+Y
Sbjct: 374 RTLLPNKFSYTPL-------MHAYCKQGDYVMASDMLFKIAETGDKPD-------LVSYG 419
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
A I+G G ++ AL + M E G+ PDA YN+++SG C+ G+ K+ + E
Sbjct: 420 AFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK---KGRFPAAKLLLSEM 476
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
L ++ Y Y++L++ ++ +++KA L + G V +V
Sbjct: 477 LDLNLQPDAY-----------MYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525
Query: 184 FINGLSKKARTREAKEILLSM-ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
I GL K + +A + M I+N + TH+T ++ G+
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST------------------VIDGYVK 567
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ + A + M+ +KP+ Y LI C+ ++ +A ++ M + P++ +
Sbjct: 568 QHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVT 627
Query: 303 VLALI 307
LI
Sbjct: 628 YTILI 632
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 147/333 (44%), Gaps = 56/333 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI+ +C G+F V L ++M G+ + ++ +N++I G V++A
Sbjct: 277 TYGALIDGFCKAGKFQVVDQLLNEMNVMGL-------NVNVKVFNSIIDAKYKYGLVDKA 329
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYES 135
++R M EMG PD +YNI+I+ C RI+E E +E ++R L + Y
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEA----EEFLERAKERTLLPNKFSYTP 385
Query: 136 LMQGL----------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
LM D +Y + ++ +A G+++ A ++ ++ G
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH---TTYDALIENCSNNEF 230
++ +V ++GL KK R AK +LLS + + L + T D I N ++
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAK-LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKA 504
Query: 231 KSLVELV----------------KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
L E+V KG G +++A + M NH PD ++ +I
Sbjct: 505 TELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDG 564
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + ++D A M+ +M+ + P++ + +LI
Sbjct: 565 YVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLI 597
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML L PD Y++L ++ + E K + L + ++ G+ P +V
Sbjct: 476 MLDLNLQPDAYMYATL-------VDGFIRNNELDKATELFEVVMSKGI-------DPGVV 521
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN +I G C G++ +A+ + M +PD +++ VI G+ + + A ++ +M
Sbjct: 522 GYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQM 581
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+++ VV AY+SL+N + DM +A + R + VT
Sbjct: 582 MKQK--YKPNVV------------AYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVT 627
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I G SK + +A M+ N+CL TT+ LI +N +L+
Sbjct: 628 YTILIGGFSKTGKPEKAASFFELMLMNNCLP--NDTTFHYLINGLTNITNTTLLIEKNEE 685
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
R L+ + TM+ YN +IV C+ VD A + T+M+ GF+
Sbjct: 686 NDRSLILD---FFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFL 739
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 49/229 (21%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
+PDE T+S++ I+ Y + + QM+ P++V Y +LI
Sbjct: 552 APDEYTHSTV-------IDGYVKQHDLDSALKMFGQMMKQKY-------KPNVVAYTSLI 597
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
G+C + + A + R M L P+ V+Y I+I GF + +P KA M L
Sbjct: 598 NGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657
Query: 127 RMEEVVYESLMQGLS-----------DEDAYSSLMNDYLA-------------------- 155
+ + L+ GL+ +E+ SL+ D+ A
Sbjct: 658 P-NDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVC 716
Query: 156 ---QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
G ++ A +L ++ G+L +SV S ++GL + +++E + I+
Sbjct: 717 LCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNII 765
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLP--DFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
SL+N G+ L+D+M+ G D V + S+V ++ G C +G+VEE
Sbjct: 169 SLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVI---VVKGLCDVGKVEEGR 225
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM-EEVVYESLMQ 138
++ G P+ V YN++I G+C+ + D KR R+ EE+ + +
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCK------------KGDLKRATRVFEELKLKGFLP 273
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF---INGLSKKARTR 195
L + Y +L++ + G K ++D+ + + +V VF I+ K
Sbjct: 274 TL---ETYGALIDGFCKAG---KFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVD 327
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
+A E++ M C + TTY+ LI +CS K E ++ + R L+
Sbjct: 328 KAAEMMRMMTEMGC--EPDITTYNILINFSCSGGRIKEAEEFLERAKERTLL-------- 377
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ Y L+ +C+ + A +M ++ G P + S A I
Sbjct: 378 --------PNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFI 422
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 115/303 (37%), Gaps = 39/303 (12%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ C G+ + L D NG +P+ +V YN +I GYC G ++ A +
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPN-------VVFYNVIIDGYCKKGDLKRATRVF 263
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ G P +Y +I GFC+ GK + ++E ++ + V
Sbjct: 264 EELKLKGFLPTLETYGALIDGFCK---AGKFQVVDQLLNEMNVMGLNVNV---------- 310
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
++S+++ G ++KA + R + G + T ++ IN R +EA+E L
Sbjct: 311 -KVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLE 369
Query: 203 SMISNSCL-SKTTHTTY--------------DALIENCSNNEFKSLVE---LVKGFRMRG 244
+ L +K ++T D L + + LV + G G
Sbjct: 370 RAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGG 429
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ A + M+ PD +YN L+ C+ A + + M+ P +
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489
Query: 305 ALI 307
L+
Sbjct: 490 TLV 492
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 37/283 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I C G+ L M NG+ PD L+TY +I G C GR+EEA
Sbjct: 143 YNVVIKLVCKQGDVEMGEKLMKDMSLNGICPD-------LITYMTMIEGLCSAGRLEEAY 195
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+++ M G SP++V + V+ G CR+ +A EL EM++ V Y SL+Q
Sbjct: 196 EMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTYTSLIQS 255
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
++ +N ILDR A G + VT I L + R EA +
Sbjct: 256 FCKRGEWTEALN------------ILDRMRAF-GCFANHVTVFTLIESLCTEGRVDEAYK 302
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
++ ++ C+S+ Y++L+ + ++ ++ G A ML
Sbjct: 303 VVDKLVVEHCVSR--GDCYNSLV-----------ISFIRVKKLEG----AENLFKEMLAA 345
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
KPD + L+ E C V + + + + GF+ + S
Sbjct: 346 EIKPDTLASSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDS 388
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
V+ L +LR M + + PD V YN+VI C+ + +EM EK + M
Sbjct: 121 VDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCK--------QGDVEMGEKLMKDM------ 166
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
SL D Y +++ + G +E+AY + + + +G SV S ++GL +
Sbjct: 167 SLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSM 226
Query: 195 REAKEILLSM-ISNSCLSKTTHTTYDALIEN-CSNNEFK-------------------SL 233
A E+L M S C TY +LI++ C E+ ++
Sbjct: 227 ERALELLDEMEKSGDCCPNV--VTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTV 284
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
L++ G V EA + D ++ + G YN L++ R K ++ A N++ M+
Sbjct: 285 FTLIESLCTEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLA 344
Query: 294 YGFVPHMFS 302
P +
Sbjct: 345 AEIKPDTLA 353
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 128/316 (40%), Gaps = 52/316 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNA--------------YFSLINAYCLGGEFSKVSNLHDQMIHN 46
++ +G D +Y +L N Y +IN C +L+ +M+
Sbjct: 71 VIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVK 130
Query: 47 GVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
+ PD +VTYN LIYG+C +G++E+A+ + M + P+ S+NI+I G C+
Sbjct: 131 RIFPD-------VVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCK 183
Query: 107 IREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILD 166
E D K + V+ + ++ D SSL++ Y KA +
Sbjct: 184 ------------EGDVKGGKSVLAVMIKQSVK--PDVVTCSSLIDGYFLVKKANKARYIF 229
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCS 226
+A +G + + ++ INGLSK EA + M S T TY LI+
Sbjct: 230 NAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDT--ITYSTLID--- 284
Query: 227 NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
G G +S D M + Y+ L+ C+ + D A
Sbjct: 285 ------------GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIR 332
Query: 287 MYTRMVHYGFVPHMFS 302
++T++ GF P+M +
Sbjct: 333 IFTKIKDKGFEPNMVT 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + + PD T SSL + YF + A +K + + M NGV D L
Sbjct: 197 MIKQSVKPDVVTCSSLIDGYFLVKKA-------NKARYIFNAMAQNGVTID-------LR 242
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G V+EA+ + + M ++PD ++Y+ +I G ++ ++L +
Sbjct: 243 SYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDL---I 299
Query: 121 DEKRIL-RMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
DE R R V+ YSSL+N G + A + +I G+ V
Sbjct: 300 DEMRATGRSANVI------------TYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMV 347
Query: 180 TESVFINGLSKKARTREAKEIL 201
T ++ ++GL K R ++A+EI
Sbjct: 348 TYNILVDGLCKNGRLKDAQEIF 369
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++ ++PD TYS+L + L G S V +L D+M G S +++
Sbjct: 267 MQFKSMTPDTITYSTLIDGLGKL-------GRISYVWDLIDEMRATG-------RSANVI 312
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ C G + A+ I + + G P+ V+YNI++ G C+
Sbjct: 313 TYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCK-------------- 358
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
R+ +E+ ++ L++G D Y+ ++N + ++AY G +V
Sbjct: 359 -NGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAV 408
Query: 180 TESVFINGLSKKARTR 195
T + I L K + +
Sbjct: 409 TYEIIIRALFKNDKNK 424
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 38/314 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ D S L N+++ L L FS ++ +++ G PD V
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQ---LNYAFSVLA----KILKIGYQPD-------TV 46
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T L+ G C V++AL + G D VSY +I+G C+ E + M
Sbjct: 47 TLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSM 106
Query: 121 DEKRILRMEEVV--YE-----SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
R+ + + VV Y+ + + D Y++L+ + G +E A L E+
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL 233
+ + ++ I+GL K+ + K +L MI S + CS+
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPD---------VVTCSS------ 211
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
L+ G+ + ++A + M D YN +I + K VD+A ++ M
Sbjct: 212 --LIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQF 269
Query: 294 YGFVPHMFSVLALI 307
P + LI
Sbjct: 270 KSMTPDTITYSTLI 283
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 135/355 (38%), Gaps = 90/355 (25%)
Query: 1 MLWRGLSPDEGTYS----------------SLFN------------AYFSLINAYCLGGE 32
M+ +G PD+ TYS SLF Y LI+++C G
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ D+M+H G +P++VTY ALI+ Y ++ A + M G P
Sbjct: 511 IQQARKWFDEMLHKGC-------TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP 563
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+Y +I G C+ + KA ++ Y+ + D
Sbjct: 564 NVVTYTALIDGHCKAGQIEKACQI-----------------------------YARMRGD 594
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ DM+K + LD +T ++GL K R +EA E+L +M+++ C +
Sbjct: 595 -IESSDMDKYFKLDHNNCEG---PNVITYGALVDGLCKANRVKEAHELLDTMLAHGC--E 648
Query: 213 TTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL-------------------VSEAARA 252
YDA+I+ C + + E+ RG + +
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
ML + P+ +Y ++ C+ D+AY + +M G P++ + A+I
Sbjct: 709 LSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 53/314 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQM---IHNGVLPDFV---- 53
ML G P+ TY++L I+ +C G+ K ++ +M I + + +
Sbjct: 556 MLLEGCKPNVVTYTAL-------IDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDH 608
Query: 54 --TGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
P+++TY AL+ G C RV+EA +L M G P+ + Y+ VI GFC+I +
Sbjct: 609 NNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQ 668
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIA 170
A E+ +M E+ G S YSS ++ ++ + ++
Sbjct: 669 DAQEVFTKMSER---------------GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKML 713
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEF 230
+ V + ++GL K +T EA +++L M C TY A+I+
Sbjct: 714 ENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGC--NPNVVTYTAMID------- 764
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN--VDKAYNMY 288
GF G + + M P+ Y LI HC C N +D+AY +
Sbjct: 765 --------GFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI-NHC-CSNGLLDEAYKLL 814
Query: 289 TRMVHYGFVPHMFS 302
M + H+ S
Sbjct: 815 DEMKQTYWPKHILS 828
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 28 CLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE 87
C G+F + + +M+ G +PD T Y+ +I C +VE+A + M
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDST-------YSKVIGFLCDASKVEKAFSLFEEMKR 488
Query: 88 MGLSPDAVSYNIVISGFCR---IREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DE 143
G+ P +Y I+I FC+ I++ K ++ E L +G + +
Sbjct: 489 NGIVPSVYTYTILIDSFCKAGLIQQARKWFD------------------EMLHKGCTPNV 530
Query: 144 DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLS 203
Y++L++ YL M A L + +G VT + I+G K + +A +I
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590
Query: 204 M---ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M I +S + K ++ NC + LV G V EA DTML
Sbjct: 591 MRGDIESSDMDKYFKLDHN----NCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHG 646
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+P+ VY+ +I C+ + A ++T+M G+ P++++ + I
Sbjct: 647 CEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 75/305 (24%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT--------- 54
RG SP+ TYSS + F V + +M+ N P+ V
Sbjct: 680 RGYSPNLYTYSSFIDCLFK-------DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732
Query: 55 -------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
+P++VTY A+I G+ G++E+ L + R M G +P+ +
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDE----KRILRMEEVVYESLMQ------GLSDE-- 143
+Y ++I+ C +AY+L EM + K IL +++ E Q GL DE
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII-EGFSQEFITSIGLLDELS 851
Query: 144 --------DAYSSLMNDYLAQGDMEKAYILDREIAHDG--YLSESVTESVFINGLSKKAR 193
Y L+++Y+ G +E A L EI+ +S + I LS ++
Sbjct: 852 ENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASK 911
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAH 253
+A E+ SMIS + + E LV L+KG EA +
Sbjct: 912 VDKALELYASMISKNVVP-----------------ELSILVHLIKGLIKVDKWQEALQLS 954
Query: 254 DTMLH 258
D++
Sbjct: 955 DSICQ 959
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 56/308 (18%)
Query: 12 TYSSLFNAYFSLINAY--CLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
+Y+ + + Y AY C GG+ + +L D+ DFV P V YN ++ G
Sbjct: 239 SYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA------EDFV---PDTVFYNRMVSGL 289
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C EEA+ IL M P+ V+Y I++SG R + G+ KRIL M
Sbjct: 290 CEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRC---------KRILSM- 339
Query: 130 EVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+ +G + + ++SL++ Y D AY L +++ G + ++FI +
Sbjct: 340 -----MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSV 394
Query: 189 SKKARTREAKEILLSMISNS---------CLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ + +L ++ + L+K + + + C +F +++
Sbjct: 395 C--SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL--CGAGKFDQAFKIICE 450
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+G V PD Y+ +I C V+KA++++ M G VP
Sbjct: 451 MMGKGFV----------------PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494
Query: 300 MFSVLALI 307
+++ LI
Sbjct: 495 VYTYTILI 502
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+ Y++L+ +L ++ AY++ RE+ ++ + T S F L K + REA +++
Sbjct: 211 QTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLID 270
Query: 203 S-------------MISNSCLSKTTHTTYDALIENCSNNEFKSLVE---LVKGFRMRGLV 246
M+S C + D L S++ ++V L+ G +G +
Sbjct: 271 EAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQL 330
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
R M+ P+ ++N LI +C+ ++ AY ++ +M+ G P
Sbjct: 331 GRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQP 382
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 41/282 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI+A+C K D+M+ +G SP + Y LI G GR+ +A
Sbjct: 387 TYTALISAFCGVNNIDKAMQYFDEMLSSGC-------SPDAIVYYCLISGLTIAGRMGDA 439
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ + G D YN++ISGFC+ ++ + YE+ EM+E + + + V Y +L+
Sbjct: 440 SVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGV-KPDIVTYNTLVS 498
Query: 139 GLSDEDAYSSLMNDYLAQ-GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
YL + GD A + +++ +G VT I+ K EA
Sbjct: 499 --------------YLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEA 544
Query: 198 KEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
+I M S S + T Y+ LI+ C NN+ + V L+ +++G+
Sbjct: 545 MKIFGEMCSTSMVPPNT-VIYNILIDALCKNNDVERAVSLMDDMKVKGV----------- 592
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+P+ YN + + + KA+ + RMV P
Sbjct: 593 -----QPNTTTYNAIFKGVQDKRMLHKAFELMDRMVEDACNP 629
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 128/317 (40%), Gaps = 42/317 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LIN +C + + D++ G ++ P +V YN LI G C +GR EE L +L
Sbjct: 243 LINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEPDVVLYNTLINGLCKVGREEEGLNLL 302
Query: 83 RGMP-EMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL- 140
M E P+ ++YN +I GFC+ KA EL M+E++I + V +L+ G+
Sbjct: 303 EEMKTEKKNKPNTITYNCLIDGFCKAGNIDKARELFGLMNEEQI-QPNVVTLNTLVDGMC 361
Query: 141 ---------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ Y++L++ + +++KA E+ G +++
Sbjct: 362 KIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAI 421
Query: 180 TESVFINGLSKKARTREAKEILLS---------------MISNSCLSKTTHTTYDALIEN 224
I+GL+ R +A ++ +IS C K Y+ L E
Sbjct: 422 VYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEM 481
Query: 225 CSNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
N +V LV G + A + M+ KP Y +I +C KN+
Sbjct: 482 EENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNI 541
Query: 282 DKAYNMYTRMVHYGFVP 298
D+A ++ M VP
Sbjct: 542 DEAMKIFGEMCSTSMVP 558
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y LI+ +C + +V + ++M NGV PD +VTYN L+ G A
Sbjct: 458 YNVLISGFCKKKKLERVYEMLNEMEENGVKPD-------IVTYNTLVSYLGKAGDFATAT 510
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+++ M + GL P V+Y VI +C + +A ++ EM ++ V+Y L+
Sbjct: 511 KVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDA 570
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
L + D+E+A L ++ G + T + G+ K +A E
Sbjct: 571 LCKNN-------------DVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRMLHKAFE 617
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSN-NEFKSLVELVKGFRM 242
++ M+ ++C + T + L E S E + L VKG R+
Sbjct: 618 LMDRMVEDAC--NPDYVTMEILTEWLSAIGEIEKLKLFVKGHRV 659
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL P TY ++ I+AYCL + + +M ++P P+ V
Sbjct: 516 MIKEGLKPSVVTYGAV-------IHAYCLKKNIDEAMKIFGEMCSTSMVP------PNTV 562
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN LI C VE A+ ++ M G+ P+ +YN + G R KA+EL M
Sbjct: 563 IYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRMLHKAFELMDRM 622
Query: 121 DE 122
E
Sbjct: 623 VE 624
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 54/305 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P Y+ + +A S F ++ L++ M G+ P++ TYN
Sbjct: 139 GCEPSVKIYNLVLDALLS-------QNLFKMINALYNNMKSEGL-------EPNVFTYNV 184
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ C G+V+ A +L M G PD VSY VIS C++ + KA EL M
Sbjct: 185 LLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAM------ 238
Query: 125 ILRMEEV--VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+ E V VY +L+ G+ E + ++A+ L E+ G ++ S
Sbjct: 239 --KFEPVVPVYNALIHGVCKECRF-------------KEAFDLMNEMVDRGVDPNVISYS 283
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
I+ LS + + M C ++ L+KGF +
Sbjct: 284 TVISCLSDMGNVELSLAVFGRMFVRGCRPNV-----------------QTFTSLIKGFFV 326
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
RG V +A + M+ P+ YN LI C N+D+A +++ +M P++ +
Sbjct: 327 RGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTT 386
Query: 303 VLALI 307
+I
Sbjct: 387 YSTII 391
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG P+ T++SL +F + G L + MI GV SP++V
Sbjct: 305 MFVRGCRPNVQTFTSLIKGFF-------VRGRVGDAVGLWNLMIREGV-------SPNVV 350
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN LI+G C G ++EA+ + M + + P+ +Y+ +I GF + + A E +M
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDM-EKAYILDREIAHDGYLSESV 179
R VVY + M D L Q M ++A+ L + DG +
Sbjct: 411 INCG-CRPNVVVY--------------TCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVI 455
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC-SNNEFKSLVELVK 238
T + FI GL + R A +L M CL TY+ L++ N F+ L++
Sbjct: 456 TFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI--RTYNELLDGLFRANAFREACGLIR 513
Query: 239 GFRMRGLVSEAARAHDTMLHG 259
R + + ++T+++G
Sbjct: 514 ELEERKVEFDCV-TYNTIMYG 533
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 131/345 (37%), Gaps = 78/345 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
GL P+ TY+ L + A C G+ L +M + G PD V+ +
Sbjct: 174 GLEPNVFTYNVL-------LKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK 226
Query: 57 ---------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
P + YNALI+G C R +EA ++ M + G+ P+ +SY+ VI
Sbjct: 227 LGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286
Query: 102 SGFCRIREPGKAYELKMEMDEK---RILRMEEVVYESLMQGL------------------ 140
S + + G EL + + + R R + SL++G
Sbjct: 287 SC---LSDMGNV-ELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR 342
Query: 141 ----SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+ AY++L++ + G+M++A + ++ D T S I G +K
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS 402
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
A E MI+ C + Y +++ C + F +L+ D
Sbjct: 403 ACETWNKMINCGC--RPNVVVYTCMVDVLCQMSMFDQAFDLI----------------DN 444
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
M+ P +N I CR V+ A N+ +M Y +P++
Sbjct: 445 MISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI 489
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 13/133 (9%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------GSPSLVTYNALIY 67
Y ++I++ C + +L+ +M+ + PD +T P+ VTYN+L+
Sbjct: 118 YIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMD 177
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
GYC L V +A I M + G++P SYNI+I+GFC+I++ +A L EM ++++
Sbjct: 178 GYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIP 237
Query: 128 MEEVVYESLMQGL 140
+ V Y SL+ GL
Sbjct: 238 -DVVTYNSLIDGL 249
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 24/263 (9%)
Query: 51 DFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
+F+ P LV N L +C LG + + +L + +MG PD ++ N +I G C +
Sbjct: 2 EFLGIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDI 61
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
+A +++V M D+ +Y +L+ND G+ + A L R +
Sbjct: 62 HQALHFH-----------DKLVAIGFML---DQFSYGTLINDLCKAGETKAALELLRRV- 106
Query: 171 HDGYLSES--VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
DG L + V I+ + K A ++ M+S TY+ALI +
Sbjct: 107 -DGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDI--LTYNALISDFCIV 163
Query: 229 EFK----SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
FK + L+ G+ + V++A +TM P YN LI C+ K VD+A
Sbjct: 164 GFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEA 223
Query: 285 YNMYTRMVHYGFVPHMFSVLALI 307
N++ M +P + + +LI
Sbjct: 224 INLFEEMHCRKLIPDVVTYNSLI 246
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 19/135 (14%)
Query: 1 MLWRGLSPDEGTYSSL------------FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGV 48
M+ + +SPD TY++L F Y SL++ YCL E +K ++ + M GV
Sbjct: 141 MVSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGV 200
Query: 49 LPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIR 108
+P++ +YN LI G+C + +V+EA+ + M L PD V+YN +I G C+
Sbjct: 201 -------NPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVTYNSLIDGLCKSG 253
Query: 109 EPGKAYELKMEMDEK 123
+ A +L EM ++
Sbjct: 254 KISYALKLVDEMHDR 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 22/250 (8%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++L I CL G+ + + HD+++ G + D
Sbjct: 36 ILKMGYEPDTITLNTL-------IKGLCLKGDIHQALHFHDKLVAIGFMLD-------QF 81
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI C G + AL +LR + + PD V Y +I C+ + A++L +M
Sbjct: 82 SYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKM 141
Query: 121 DEKR----ILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
KR IL ++ + + G Y+SLM+ Y ++ KA + +A +G
Sbjct: 142 VSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVN 201
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
+ ++ ING K + EA + M + TY++LI+ C + + +
Sbjct: 202 PAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDV--VTYNSLIDGLCKSGKISYAL 259
Query: 235 ELVKGFRMRG 244
+LV RG
Sbjct: 260 KLVDEMHDRG 269
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 51/319 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNL-HDQMIHNGVLPDFVTGSPSLVTYN 63
GL P Y++L YF L G+ + NL H+ + V P++ TY
Sbjct: 261 GLQPTAKIYTTLMGIYFKL-------GKVEEALNLVHEMRMRRCV--------PTVYTYT 305
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI G GRVE+A G+ + M + G PD V N +I+ R +A EL +E
Sbjct: 306 ELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVEL---FEEM 362
Query: 124 RILRMEE--VVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
R+L V Y ++++ L ++ A S + +L + + DG + S T
Sbjct: 363 RLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLER------------MKKDGVVPSSFTY 410
Query: 182 SVFINGLSKKARTREAKEILLSM------------------ISNSCLSKTTHTTYDALIE 223
S+ I+G K R +A +L M + + + + + L E
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
NC ++ + ++K F G +EA + M PD YN LI R +D+
Sbjct: 471 NCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDE 530
Query: 284 AYNMYTRMVHYGFVPHMFS 302
A++++ M G P + S
Sbjct: 531 AFSLFRTMEENGCNPDINS 549
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 123/305 (40%), Gaps = 45/305 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNG-VLPDFVTGSPSLVTY 62
R P GTY+S+ I G KV L+++M G PD VTY
Sbjct: 189 RKCRPTAGTYNSV-------ILMLMQEGHHEKVHELYNEMCSEGHCFPD-------TVTY 234
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
+ALI + L R + A+ + M E GL P A Y ++ + ++ + +A L EM
Sbjct: 235 SALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM-- 292
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
R+ R VY Y+ L+ G +E AY + + + DG + V +
Sbjct: 293 -RMRRCVPTVY-----------TYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
IN L + R +EA E+ M +C TY+ +I KSL F
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNV--VTYNTII--------KSL------FED 384
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ SEA+ + M P Y+ LI C+ V+KA + M GF P +
Sbjct: 385 KAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 444
Query: 303 VLALI 307
+LI
Sbjct: 445 YCSLI 449
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
E SS Y +I + G F++ L ++M G +PD + YNALI G
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPD-------VYAYNALITGM 522
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
++EA + R M E G +PD S+NI+++G R P +A E+ +M I + +
Sbjct: 523 VRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTI-KPD 581
Query: 130 EVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
V Y +++ LS G E+A L +E+ G+ + +T S + +
Sbjct: 582 AVSYNTVLGCLS-------------RAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVG 628
Query: 190 KKARTREAKE 199
K R E
Sbjct: 629 KVDEDRNMAE 638
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
+P+ TY+++ + F S+ S+ ++M +GV+P S TY+ LI
Sbjct: 368 TPNVVTYNTIIKSLFED------KAPPSEASSWLERMKKDGVVP-------SSFTYSILI 414
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK--- 123
G+C RVE+AL +L M E G P +Y +I+ + + A EL E+ E
Sbjct: 415 DGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGS 474
Query: 124 RILRMEEVVYESL------------------MQGLSDEDAYSSLMNDYLAQGDMEKAYIL 165
+R+ V+ + + + D AY++L+ + M++A+ L
Sbjct: 475 SSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSL 534
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
R + +G + + ++ +NGL++ + A E+ M S++
Sbjct: 535 FRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL+ A C GE +LHD++ GV ++V+Y LI G C + R + A+ +
Sbjct: 130 SLLKAMCFNGEVQMALDLHDKLKKAGV-------PLTIVSYGTLISGLCKINRHDAAMLV 182
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
L+ M ++ + PDA+ Y +I C+ + A EL EM E I + Y +L+ GL
Sbjct: 183 LKKM-KVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFP-DVFTYTTLIHGLC 240
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D + + A+ +E+ + T S + L K+ R RE+K +L
Sbjct: 241 ISDNFKA-------------AFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALL 287
Query: 202 LSMISNSCLSKTTHTTYDALIE-NCSNNE-------FKSLVE------------LVKGFR 241
+MI + + ++ L+E +CS ++ F SL + L KG
Sbjct: 288 NTMIKDGL--EPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLL 345
Query: 242 MRGL--VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+GL E + M PD YN +I C +D A++ MV G P
Sbjct: 346 SQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQP 404
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 32/246 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+++T+N+L+ CF G V+ AL + + + G+ VSY +ISG C+I A +
Sbjct: 123 PNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLCKINRHDAAMLV 182
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M K + + ++Y++++ L + +E A L E+ G
Sbjct: 183 LKKM--KVCVPPDAIIYKTIIDCLCKD-------------SKVETALELYTEMIESGIFP 227
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ T + I+GL + A E M+SN T TY AL + L
Sbjct: 228 DVFTYTTLIHGLCISDNFKAAFEFFKEMVSNEI--NPTVYTYSAL-----------MAYL 274
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
K R+R E+ +TM+ +PD ++N L+ HC + KA ++ + G
Sbjct: 275 CKRKRVR----ESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGI 330
Query: 297 VPHMFS 302
P ++S
Sbjct: 331 TPDIYS 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/350 (18%), Positives = 127/350 (36%), Gaps = 79/350 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ G+ PD TY++L I+ C+ F +M+ N + P T S
Sbjct: 220 MIESGIFPDVFTYTTL-------IHGLCISDNFKAAFEFFKEMVSNEINPTVYTYSALMA 272
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P L +N L+ G+C L ++++A I +P+ G++P
Sbjct: 273 YLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITP 332
Query: 93 DAVSYNIVISGFCR--IREPGKAYELKMEMDEKRILRMEEVVYESLMQGL---------- 140
D SYNI+ G + P + L +M K++ + + Y +++ G+
Sbjct: 333 DIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKKV-SPDLITYNTIIHGMCNFSRMDCAW 391
Query: 141 ------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
D Y+ L+ + +++A L I+ G ++ T ++ I+
Sbjct: 392 DFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAF 451
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVS 247
K R A+ T + +++ C N+ F ++++ + +G
Sbjct: 452 WKSGRFEAAQATFWDAFKKG--YDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKGCT- 508
Query: 248 EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
P+ +Y ++ ++KA + M GF+
Sbjct: 509 ---------------PNKAIYEVIVYALFENDEIEKATKLVYEMSRMGFL 543
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RG+ P+ L N LIN +C G ++ +++ G +P+ +
Sbjct: 113 MEFRGIKPN------LVNCNI-LINCFCQLGLIPFAFSVFAKILKMGY-------NPNTI 158
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ LI G C G++ +AL + +G + +SY +I G C++ E A +L +
Sbjct: 159 TFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D K +++ V+Y +++ G+ + +ND A+ L E+ G VT
Sbjct: 219 DGK-LVQPNVVMYSTIIDGMCKDKH----VND---------AFDLYSEMVSKGISPNVVT 264
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S I+G + ++A ++ MIS + K T++ L++ F
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENI--KPDVYTFNILVD---------------VF 307
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G +S A + D M P+ Y+ ++ C+ VDKA + T++ G P+M
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNM 367
Query: 301 FSVLALI 307
+ LI
Sbjct: 368 HTYTILI 374
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + +L+ +M+ G+ SP++VTY+ALI G+ +G++++A+
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGI-------SPNVVTYSALISGFFTVGKLKDAV 282
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK---------------- 123
+ M + PD ++NI++ FC+ + A +L EM ++
Sbjct: 283 DLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 342
Query: 124 -RILRMEEVVYESLMQGLSDE------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ R+++ V +L+ L D+ Y+ L++ G +E A + ++ GY
Sbjct: 343 CKTHRVDKAV--ALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDI 400
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
VT V G KK EA +L M N C+
Sbjct: 401 TVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 107/269 (39%), Gaps = 40/269 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P + +N ++ L + + M G+ P+ V+ NI+I+ FC++ A+
Sbjct: 84 TPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 143
Query: 116 LKMEMDEKRILRM----EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+ +IL+M + + +L++GL +G + +A ++
Sbjct: 144 V-----FAKILKMGYNPNTITFTTLIKGLC-------------LKGQIHQALNFHDKLVA 185
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILL---------------SMISNSCLSKTTHT 216
G+ ++ I+GL K TR A ++L ++I C K +
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 217 TYDALIENCSNNEFKSLVE---LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
+D E S ++V L+ GF G + +A + M+ N KPD +N L+
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
C+ + A + M G P++ +
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVT 334
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 44/310 (14%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA +I C GG + S + +M ++G+LPD + +Y+ LI G+C GRV+
Sbjct: 254 FNA---VIYGLCQGGILDEASEVFKEMKNSGILPD-------VYSYSILIDGFCRKGRVD 303
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
+A + + M G+ P+ SY+I+I GFC+ KA E+ EM I
Sbjct: 304 QASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI----------- 352
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
L D +YS L++ + +GDM+ A E+ + + + I G K +
Sbjct: 353 ---LPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 409
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR--------------- 241
A + M T + I C +F + L + F+
Sbjct: 410 ALKEFRIMQKLGMWPDTIACNHILSIY-CRKPDFNKALALSEKFQENGVHFNPYSYNEFI 468
Query: 242 ---MRGLVSEAA-RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
RG V E A + ML N PD Y+ LI + N +KA ++ +M G
Sbjct: 469 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 528
Query: 298 PHMFSVLALI 307
++ + LI
Sbjct: 529 FNVKTYTILI 538
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 144/378 (38%), Gaps = 90/378 (23%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD +YS L I+ +C G + S + +M ++G+LP+ + +Y+
Sbjct: 281 GILPDVYSYSIL-------IDGFCRKGRVDQASEVFKEMRNSGILPN-------IYSYSI 326
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G+C GRV++AL + M G+ PD SY+I+I GFCR + A + EM
Sbjct: 327 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 386
Query: 125 ILRMEEVVYESLMQG----------------------LSDEDAYSSLMNDYLAQGDMEKA 162
Y SL++G D A + +++ Y + D KA
Sbjct: 387 -FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKA 445
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN-------------SC 209
L + +G + + FI+ + + + +A ++L M+ SC
Sbjct: 446 LALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISC 505
Query: 210 LSKTTHT--------------------TYDAL----IENCSNNE----FKSLVE------ 235
+K ++ TY L I +C + FK + E
Sbjct: 506 FAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPD 565
Query: 236 ------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
LV GF G ++ A D M P+ Y I E+ + ++A+ +Y
Sbjct: 566 QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 625
Query: 290 RMVHYGFVPHMFSVLALI 307
+M G P LI
Sbjct: 626 KMKERGVYPDQILYTMLI 643
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY SL+ +C GE ++ L D+M G SP++VTY I Y L + +A
Sbjct: 568 AYTSLVAGFCNTGEMTRARALFDEMSREGC-------SPNVVTYTCFINEYLKLNKNNQA 620
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M E G+ PD + Y ++I+ FC E +A L EM ++ V+Y L+
Sbjct: 621 HKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLIN 680
Query: 139 G---LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
L+ D L + A+G L R + +G +SES S
Sbjct: 681 SYIKLNKRDQAEKLYEEMRAKG-------LSRLCSSEGSVSESWCNS 720
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 41/258 (15%)
Query: 57 PSLVTYNALIYGYCF-------LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
P++ TY ++ +C + R E LG + G +P+ V+Y I G C++
Sbjct: 175 PNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIY---MSGETPNVVTYGTYIKGLCKVGL 231
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
G A+ L + K Q L++ +++++ G +++A + +E+
Sbjct: 232 FGVAWRLIQNLCRKN-------------QPLNNH-CFNAVIYGLCQGGILDEASEVFKEM 277
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE 229
+ G L + + S+ I+G +K R +A E+ M ++ L +Y LI+
Sbjct: 278 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNI--YSYSILID------ 329
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
GF G V +A + M + PD Y+ LI CR ++D A +
Sbjct: 330 ---------GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWE 380
Query: 290 RMVHYGFVPHMFSVLALI 307
M F P F+ +LI
Sbjct: 381 EMTSNNFSPSAFNYCSLI 398
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 109/284 (38%), Gaps = 68/284 (23%)
Query: 56 SPSLVTYNAL-----------------------------------IYGYCFLGRVEEALG 80
+P++VTY IYG C G ++EA
Sbjct: 213 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 272
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
+ + M G+ PD SY+I+I GFCR +A E+ EM I L
Sbjct: 273 VFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI--------------L 318
Query: 141 SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
+ +YS L++ + +G ++KA + E+ + G L + + S+ I+G +K A +
Sbjct: 319 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 378
Query: 201 LLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M SN N S + F + L+KG+ + A + M
Sbjct: 379 WEEMTSN----------------NFSPSAF-NYCSLIKGYYKSKQFANALKEFRIMQKLG 421
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG--FVPHMFS 302
PD N ++ +CR + +KA + + G F P+ ++
Sbjct: 422 MWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYN 465
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLIN---AYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS- 56
ML R + PD YS+L + + +N A L + +KV + + ++ F++
Sbjct: 487 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 546
Query: 57 -----------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
P + Y +L+ G+C G + A + M G SP+ V+Y
Sbjct: 547 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 606
Query: 100 VISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDM 159
I+ + ++ + +A++L +M E+ + D+ Y+ L+ + G+M
Sbjct: 607 FINEYLKLNKNNQAHKLYEKMKERGV--------------YPDQILYTMLIAAFCNTGEM 652
Query: 160 EKAYILDREIAHDGYLSESVTE-SVFINGLSKKARTREAKEILLSM 204
+A L E+ +G + +V + IN K + +A+++ M
Sbjct: 653 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 698
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 67/335 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDF-------- 52
M +G PD +Y+ + I+A C F +V ++ ++I +G+ PDF
Sbjct: 141 MPLKGRKPDVVSYTII-------IDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVV 193
Query: 53 --------------VTGSPS------LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
V G S + YNALI+G+ +G+ ++A I M + G +P
Sbjct: 194 GLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKKDKAEAIRGFMSKNGCAP 253
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YNI+++ C E+ ++ E+ + ME G++D +Y+ L+
Sbjct: 254 DLVTYNILLNYGCD--------EVTVDEAERLVETMER-------SGMADLYSYNELLKA 298
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ +++AY+ + ++V+ + I K RT A E+
Sbjct: 299 FCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTIIVAFCKVRRTERAYEL------------ 346
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
Y+ + + + L+K F +G + A + M PD Y ++
Sbjct: 347 -----YEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVV 401
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ N+DKAY ++ MV G P + S A+I
Sbjct: 402 DHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAII 436
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 50/312 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y I A C F + +L M G++PD + +N + C R+E A
Sbjct: 82 TYSRFITALCSVKNFLLIESLLRDMDDLGIVPD-------IWAFNIYLNILCRENRLETA 134
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY---ES 135
L + + MP G PD VSY I+I C+++ R +EVV+ +
Sbjct: 135 LQLFQTMPLKGRKPDVVSYTIIIDALCKVK------------------RFDEVVHVWRKL 176
Query: 136 LMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
+ GL D ++L+ + G ++ AY L + G + + I+G K +
Sbjct: 177 IDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKK 236
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALI----ENCSNNEFKSLVELVKGFRMRGLVS--- 247
+A+ I M N C TY+ L+ + + +E + LVE ++ M L S
Sbjct: 237 DKAEAIRGFMSKNGCAPDL--VTYNILLNYGCDEVTVDEAERLVETMERSGMADLYSYNE 294
Query: 248 ---------EAARAHDTMLHGNHKP---DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+ RA+ M++ D YN +IV C+ + ++AY +Y M G
Sbjct: 295 LLKAFCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKG 354
Query: 296 FVPHMFSVLALI 307
P + + LI
Sbjct: 355 IQPDVVTFTVLI 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 44/205 (21%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------GS---------- 56
+Y ++I A+C + L+++M G+ PD VT GS
Sbjct: 326 SYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEM 385
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
P ++ Y ++ C G +++A G+ M E G+SPD VSYN +I+GFC+
Sbjct: 386 KAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASRV 445
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGD-MEKAYILDREI 169
A+ L EM K GL ++ +L+ L QG+ + +AY + ++
Sbjct: 446 MGAWRLYEEMQVK---------------GLDPDEVTFNLIVGVLIQGNKISEAYRVWDQM 490
Query: 170 AHDGYLSESVTESVFINGLSKKART 194
G+ ++ +N + + T
Sbjct: 491 MEKGFTLNGDLSNILVNAVQSRDGT 515
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 55 GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
G V+YN +I +C + R E A + M G+ PD V++ ++I F R A
Sbjct: 320 GVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVAN 379
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+L +EM RI+ +V++ Y+++++ G+++KAY + ++ +G
Sbjct: 380 KLLVEMKAMRIV--PDVIF------------YTTVVDHQCKSGNIDKAYGVFCDMVENGV 425
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+ V+ + ING K +R A + M + D + N
Sbjct: 426 SPDVVSYNAIINGFCKASRVMGAWRLYEEM-------QVKGLDPDEVTFN---------- 468
Query: 235 ELVKGFRMRG-LVSEAARAHDTMLHGNHKPDGGVYNFLI 272
L+ G ++G +SEA R D M+ +G + N L+
Sbjct: 469 -LIVGVLIQGNKISEAYRVWDQMMEKGFTLNGDLSNILV 506
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 47/310 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R SP+ TYS+L I+ +C+ G+ + ++MI + +P++
Sbjct: 1 MVSRRTSPNVVTYSAL-------ISGFCIVGKLRDAIDFFNKMIFENI-------NPNVY 46
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE----- 115
T+ L+ G+C GRV+EA +L M + G+ PD V+YN ++ G+C ++E KA +
Sbjct: 47 TFTILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIAN 106
Query: 116 -------LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDR 167
+ + +R+ E+V E +G D Y+S+++ + KA L
Sbjct: 107 KFFRSTLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLT 166
Query: 168 EIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
++ G T ++ + GL + + +A+++ + N L +T
Sbjct: 167 KLKDQGIRPNMNTYTILVKGLCRSGKLEDARKVFEDLGYN--LDVYAYTV---------- 214
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+++GF +GL E M PD Y +I+ D A +
Sbjct: 215 --------MIQGFCDKGLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKL 266
Query: 288 YTRMVHYGFV 297
M+ G +
Sbjct: 267 LREMIMRGLL 276
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ EF ++NL +QM+ +G P++VTYN LI+ Y ++EAL
Sbjct: 410 YTTMVGILGRAREFGAINNLLEQMVKDGC-------QPNVVTYNRLIHSYGRANYLKEAL 462
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M E PD V+Y +I I ++ M M E RM++V G
Sbjct: 463 NVFNQMQEKRCEPDRVTYCTLID----IHAKAGYLDVAMSMYE----RMQQV-------G 507
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
LS D YS ++N G++ A L E+ G + VT ++ I L KAR EA
Sbjct: 508 LSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMI-ALQAKARNYEAA 566
Query: 199 EILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
L + N+ K T++ ++ +C G + EA M
Sbjct: 567 LKLYRDMQNAGFRPDKVTYSIVMEVLGHC------------------GYLEEAEAVFVEM 608
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N PD VY L+ + NV+KA+ Y M+ G +P++ + +L+
Sbjct: 609 KQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNSLL 659
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
GLSPD TYS + N CLG G + L +M+ G +P+ +VTY
Sbjct: 507 GLSPDTFTYSVMIN---------CLGKSGNLAAADRLFGEMVDQGCVPN-------IVTY 550
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS--GFCRIREPGKAYELKMEM 120
N +I E AL + R M G PD V+Y+IV+ G C E +A ++M+
Sbjct: 551 NIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQ 610
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ DE Y L++ + G++EKA+ + G L T
Sbjct: 611 ----------------RNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPT 654
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE 229
+ ++ + R +A +L SM++ LS + TY L+ C++ +
Sbjct: 655 CNSLLSAFLRVHRLPDAYNLLQSMVALG-LSPSLQ-TYTLLLSCCTDAQ 701
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 52/314 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++G+ P F + LIN +C G S ++ +++ NG PD +T L
Sbjct: 1 MEFKGIKPS-------FVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTIT----LT 49
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ I C G++ +AL + MG D VSY +I+G ++ E +A EL +
Sbjct: 50 TF---IKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRV 106
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D K ++++ V+Y +++ G+ + +ND A+ L E+ VT
Sbjct: 107 DGK-LVQLNAVMYNTVIDGMCKDKH----VND---------AFDLYSEMVAKRIYPGVVT 152
Query: 181 ESVFINGLS-----KKA--RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL 233
S I G K A R +EAK + M+ K TY++L++
Sbjct: 153 YSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDI--KPNVFTYNSLMD---------- 200
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
G+ + V++A +TM G PD YN LI C+ K D+A N++ M
Sbjct: 201 -----GYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHC 255
Query: 294 YGFVPHMFSVLALI 307
+P + + +LI
Sbjct: 256 RKLIPDVVTYNSLI 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 129/321 (40%), Gaps = 63/321 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T ++ I CL G+ + + HD++I G D V
Sbjct: 36 ILKNGYEPDTITLTTF-------IKVLCLKGQIHQALHFHDKVIAMGFHLD-------QV 81
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G +G +EAL +LR + + +AV YN VI G C+ + A++L EM
Sbjct: 82 SYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEM 141
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA-------------------------YSSLMN 151
KRI V Y +L+ G +DA Y+SLM+
Sbjct: 142 VAKRIYP-GVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMD 200
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y ++ KA + +A G + + ++ ING K T EA + M +
Sbjct: 201 GYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIP 260
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
TY++LI+ C +F ++LV RG P+ Y+
Sbjct: 261 DV--VTYNSLIDGLCKLGKFSYALKLVDEMHDRG----------------QPPNIITYSS 302
Query: 271 LIVEHCRCKNVDKAYNMYTRM 291
++ C+ VDKA + T++
Sbjct: 303 ILNALCKNHQVDKAITLLTKI 323
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P + YS +F A C G L + IH G PD V
Sbjct: 572 MLEMNMKPSKVMYSKIFTAL-------CCNGNMEGAHTLFNLFIHTGFTPD-------AV 617
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +I GYC + EA + + M E G++PDAV+Y I+I+G+C++ +A+EL +M
Sbjct: 618 TYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDM 677
Query: 121 DEKRILRMEEVVYESLMQGL 140
E+ I + + + Y +++GL
Sbjct: 678 KERGI-KPDVIAYTVIIKGL 696
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 125/356 (35%), Gaps = 91/356 (25%)
Query: 9 DEGTYSSLF---NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+E S LF AY L +A C G+ + D++ + D + Y L
Sbjct: 389 EEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVD-------MKHYTTL 441
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
I GY G+ EA + + M E G PD V+YN++ +GF R R +A +L M+ + +
Sbjct: 442 INGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGV 501
Query: 126 ---LRMEEVVYESLMQGLSDEDA------------------YSSLMNDY----------- 153
+++ E L E+A Y++L+N Y
Sbjct: 502 EPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHE 561
Query: 154 ------------------------------LAQGDMEKAYILDREIAHDGYLSESVTESV 183
G+ME A+ L H G+ ++VT ++
Sbjct: 562 LKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTI 621
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
ING K EA E+ M TY +I C N + EL K +
Sbjct: 622 MINGYCKTNCLPEAHELFKDMKERGITPDA--VTYTIMINGYCKMNCLREAHELFKDMKE 679
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
RG+ KPD Y +I + + A+ +Y M+ G P
Sbjct: 680 RGI----------------KPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G +PD TY+ + IN YC + L M G+ PD VTY
Sbjct: 611 GFTPDAVTYTIM-------INGYCKTNCLPEAHELFKDMKERGITPD-------AVTYTI 656
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+I GYC + + EA + + M E G+ PD ++Y ++I G A++L EM
Sbjct: 657 MINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 144/409 (35%), Gaps = 116/409 (28%)
Query: 12 TYSSLFN--AYFSLINAYCLGGEFSKVSNLHDQMIHNGV--------------------- 48
++ +FN Y +I A C G++ V + D+M GV
Sbjct: 218 SFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSD 277
Query: 49 -----LPDFVTGSPSL--VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
L D+ T + + Y A+I G+C +++EA + M + GL PD Y ++
Sbjct: 278 LGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALV 337
Query: 102 SGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-------------------- 141
G+C R KA + M + I + V++ ++ L
Sbjct: 338 HGYCNSRNFDKALAVYKSMISRGI-KTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGL 396
Query: 142 --DEDAY-----------------------------------SSLMNDYLAQGDMEKAYI 164
D AY ++L+N Y QG +A
Sbjct: 397 FIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQS 456
Query: 165 LDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
L +E+ G+ + V +V G + EA ++L M S + TT+ +IE
Sbjct: 457 LFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGV--EPNSTTHKIIIEG 514
Query: 225 -CSNNEFKSLVE-------------------LVKGFRMRGLVSEAARAHD------TMLH 258
CS + + E LV G+ L+ ++ + TML
Sbjct: 515 LCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLE 574
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N KP +Y+ + C N++ A+ ++ +H GF P + +I
Sbjct: 575 MNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMI 623
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 49/296 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG--SPSLVTY 62
GL PD TY++L +A C S+ SNL + + GV + P L TY
Sbjct: 331 GLRPDIITYNTLISA--------C-----SRESNLKEAI---GVFSHMESNRCQPDLWTY 374
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
NA+I Y G +A + + G SPDAV+YN ++ F + K ++ EM +
Sbjct: 375 NAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVK 434
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
M DE Y+++++ Y G ++A L R++ G ++VT +
Sbjct: 435 --------------MGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYT 480
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
V I+ L K ++ EA +++ M+ K T TY ALI C+ +
Sbjct: 481 VLIDLLGKASKIEEASKVMSEMLDAGV--KPTLHTYSALI--CA-------------YAK 523
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G EA + M K D Y+ ++ R + KA +Y M+ GF P
Sbjct: 524 VGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTP 579
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G SPD TY+SL + A+ G KV ++ ++M+ G D +TYN
Sbjct: 401 GFSPDAVTYNSL-------LYAFSKEGNTEKVRDISEEMVKMGFGKD-------EMTYNT 446
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK- 123
+I+ Y GR +EAL + R M G +PDAV+Y ++I + + +A ++ EM +
Sbjct: 447 IIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAG 506
Query: 124 -------------------RILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAY 163
R + EE G+ +D AYS +++ +L +++KA
Sbjct: 507 VKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAA 566
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKK 191
L +E+ G+ ++ V + L ++
Sbjct: 567 ALYQEMIEAGFTPDTGLYEVMLPALVRE 594
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 30/198 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD ++S+ Y S+ EF + ++ QMI + L +P TYN
Sbjct: 959 GFKPDLQIFNSVLKLYSSI-------EEFQNMGVIY-QMIQDAGL------APDEETYNT 1004
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI YC R EE L ++ M +GL P +Y +I+ F + + +A
Sbjct: 1005 LITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQA----------- 1053
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
EE+ E G D Y +M Y GD +KA L + G + T +
Sbjct: 1054 ----EELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHL 1109
Query: 184 FINGLSKKARTREAKEIL 201
+ K + EA IL
Sbjct: 1110 LMVSYGKSGQPEEADRIL 1127
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 56/308 (18%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------------------------GSPS 58
LI +C+ GE + + M + G PD V+ SP+
Sbjct: 204 LIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLLKEINSPN 263
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
V+Y +I GYC L ++EA I M G+ P S+N +I GF + + A +
Sbjct: 264 DVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSA----V 319
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+M +K IL + D ++SL++ Y G ++ L E+ + +
Sbjct: 320 DMHKKMILHGCD----------PDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANL 369
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T S+ I+ L K R +EA E+L L + A I N ++
Sbjct: 370 YTYSIIISALCKSNRLQEAHELLR-------LLNQSEIVPQAFIYN----------PVID 412
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G+ G V E A A + KPD + LI+ HC +A ++ RM+ G P
Sbjct: 413 GYCKSGNVDE-ANAIVVDMEKKCKPDKLTFTILIIGHCMKGRAYEAIGIFYRMLATGCSP 471
Query: 299 HMFSVLAL 306
++ L
Sbjct: 472 DDVTIRTL 479
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 50/259 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ P + FNA LI+ + G+ S ++H +MI +G PD +V
Sbjct: 290 MVRSGVQPSVAS----FNA---LIDGFVKAGDISSAVDMHKKMILHGCDPD-------VV 335
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ +LI GYC +G+V+ L + M S + +Y+I+IS C+ +A+EL
Sbjct: 336 TFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHEL---- 391
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEK--AYILDREIAHDGYLSES 178
R+L E+V ++ + Y+ +++ Y G++++ A ++D E +
Sbjct: 392 --LRLLNQSEIVPQAFI--------YNPVIDGYCKSGNVDEANAIVVDME---KKCKPDK 438
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
+T ++ I G K R EA I M++ C + D I S+ KS
Sbjct: 439 LTFTILIIGHCMKGRAYEAIGIFYRMLATGC------SPDDVTIRTLSSCLLKS------ 486
Query: 239 GFRMRGLVSEAARAHDTML 257
G+ +EAAR + +
Sbjct: 487 -----GMPTEAARVKEILF 500
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
GR+++A+ + R + + L+ D+ ++NI+I GFC E +A+ +M
Sbjct: 177 GRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRN---------- 226
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
D +Y++LM D+++A L +EI V+ + I+G K +
Sbjct: 227 ----FGCCPDVVSYNTLMTGLCRVNDVDRARDLLKEINS----PNDVSYMIVISGYCKLS 278
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARA 252
+EA I M+ + + + +++ALI+ GF G +S A
Sbjct: 279 NMKEASSIFNEMVRSGV--QPSVASFNALID---------------GFVKAGDISSAVDM 321
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H M+ PD + LI +CR VD ++ M F ++++ +I
Sbjct: 322 HKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIII 376
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ PD TY+ L IN +C G+ + N+ + M +NG P+ + Y+AL
Sbjct: 305 IVPDPLTYNVL-------INGFCREGKADRARNVIEFMKNNGCCPN-------VFNYSAL 350
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ G C G++++A G+L M GL PDA++Y +I+ F R + +A EL EM E
Sbjct: 351 VDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDC 410
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+ + V + ++ GL E G ++A + ++ G + + +
Sbjct: 411 -QADTVTFNVILGGLCRE-------------GRFDEALDMIEKLPQQGVYLNKGSYRIVL 456
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
N L++ R+A ++L M+S + ++NE LV L K G+
Sbjct: 457 NSLTQNCELRKANKLLGLMLSRGFVPHYA-----------TSNEL--LVRLCK----EGM 499
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
++AA A ++ +P + LI CR + + + + +V
Sbjct: 500 ANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDELV 546
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMI-HNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
Y +L++ C G + L ++M+ + ++PD +TYN LI G+C G+ +
Sbjct: 275 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPD-------PLTYNVLINGFCREGKADR 327
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A ++ M G P+ +Y+ ++ G C+ GK + K V+ E
Sbjct: 328 ARNVIEFMKNNGCCPNVFNYSALVDGLCKA---GKLQDAK------------GVLAEMKS 372
Query: 138 QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
GL D Y+SL+N + G +++A L E+ + +++VT +V + GL ++ R E
Sbjct: 373 SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDE 432
Query: 197 AKEILLSMISNSC-LSKTTH-TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
A +++ + L+K ++ ++L +NC EL K ++ GL
Sbjct: 433 ALDMIEKLPQQGVYLNKGSYRIVLNSLTQNC---------ELRKANKLLGL--------- 474
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
ML P N L+V C+ + A +V GF P S LI
Sbjct: 475 -MLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLI 526
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLS-PDAVSYNIVISGFCRIREPGKAY 114
P++ +N L+ +C G ++ A +++ M S P+ ++Y+ ++ G CR +A+
Sbjct: 234 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAF 293
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDA----------------------YSSLMND 152
EL EM K + + + Y L+ G E YS+L++
Sbjct: 294 ELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDG 353
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G ++ A + E+ G +++T + IN S+ + EA E+L M N C +
Sbjct: 354 LCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQAD 413
Query: 213 TTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T T++ ++ C F +++++ +G+ + G Y +
Sbjct: 414 T--VTFNVILGGLCREGRFDEALDMIEKLPQQGVYL----------------NKGSYRIV 455
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + + KA + M+ GFVPH
Sbjct: 456 LNSLTQNCELRKANKLLGLMLSRGFVPH 483
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD TY+ SLIN + G+ + L +M N D VT+N
Sbjct: 374 GLKPDAITYT-------SLINFFSRNGQIDEAIELLTEMKENDCQAD-------TVTFNV 419
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF---CRIREPGK 112
++ G C GR +EAL ++ +P+ G+ + SY IV++ C +R+ K
Sbjct: 420 ILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANK 470
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 55/339 (16%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
Y+++ NA + I CL G+ + L +M+ GVLPD + T+N ++ G C
Sbjct: 109 YNNVENA--ATIRFLCLEGKLAAAWWLRIKMMEKGVLPD-------VYTHNHIVNGLCEN 159
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD----------- 121
GR+E A ++R M + G P+ ++YN +I G+ + KA +L M
Sbjct: 160 GRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTC 219
Query: 122 -------------EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
EK +++++ + + D A ++LM++Y G +A L E
Sbjct: 220 NIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNE 279
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSN 227
+ + V +V ING+ + + A M+ + TY+ LI C
Sbjct: 280 MIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDV--FTYNILIHALCKE 337
Query: 228 NEFK-------------------SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
+ S ++ G + G V A ML+ P ++
Sbjct: 338 GKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIW 397
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N +I + RC+++ A+ +M+ G +P++F+ ALI
Sbjct: 398 NLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 436
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 63/335 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGE 32
ML G P+ TY++L Y++ ++ A C G
Sbjct: 172 MLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGH 231
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
K N+ D+++++ D +P LV L+ Y G+ +ALG+ M +
Sbjct: 232 LEKARNMLDKILND----DNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKV 287
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YN++I+G CR ++ AY EM +K ++ + Y L+ L E S
Sbjct: 288 DVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIP-DVFTYNILIHALCKEGKISEAC-- 344
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
YL G M K I+ +I++ + I+GL AK++LL M++N + +
Sbjct: 345 YLF-GVMSKMRIIPDQISY----------KMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQ 393
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
A+I N + + +L F R D ML P+ YN LI
Sbjct: 394 -------AIIWNLIIDSYGRCEDLRNAFLTR----------DQMLASGVLPNVFTYNALI 436
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + N+ A+++ M P + + LI
Sbjct: 437 LAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLI 471
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 50/310 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ A C G K N+ D+++++ D +P LV L+ Y G+ +ALG+
Sbjct: 222 IVRALCEKGHLEKARNMLDKILND----DNGEATPDLVASTTLMDNYFKNGKSNQALGLW 277
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + D V+YN++I+G CR ++ AY EM +K ++ + Y L+ L
Sbjct: 278 NEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIP-DVFTYNILIHALCK 336
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
E S YL G M K I+ +I++ + I+GL AK++LL
Sbjct: 337 EGKISEAC--YLF-GVMSKMRIIPDQISY----------KMMIHGLCLNGDVLRAKDLLL 383
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR------------------- 243
M++N + + A+I N + + +L F R
Sbjct: 384 CMLNNFMVPQ-------AIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 436
Query: 244 ------GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G + A + M N +PD YN LI ++D A+ + MV G
Sbjct: 437 LAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGRE 496
Query: 298 PHMFSVLALI 307
P + + I
Sbjct: 497 PDLITCTEFI 506
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY LIN C + +M+ G++PD + TYN LI+ C G++ EA
Sbjct: 291 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPD-------VFTYNILIHALCKEGKISEA 343
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M +M + PD +SY ++I G C + +A +L + M ++ + +++ ++
Sbjct: 344 CYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVP-QAIIWNLII- 401
Query: 139 GLSDEDAY---SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING--LSKKAR 193
D+Y L N +L + M + +L ++ + + N L ++ R
Sbjct: 402 -----DSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMR 456
Query: 194 TREAK------EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVS 247
T+ + +L+ N H D +++ + + E ++G+ + G +
Sbjct: 457 TKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIE 516
Query: 248 EA----ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
EA AR + L +H P ++N ++C+ +A+N Y
Sbjct: 517 EAEERYARILKSGLWSDHVPVQILFN----KYCKLGEPIRAFNFY 557
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 108/272 (39%), Gaps = 56/272 (20%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT--------- 54
+G+ PD TY++L I YC G + ++ D+M G+ D V+
Sbjct: 229 KGVVPDIFTYNTL-------IALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFC 281
Query: 55 -----------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSY 97
P+ VTY LI GYC EEAL + M GL P V+Y
Sbjct: 282 KEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTY 341
Query: 98 NIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYL 154
N ++ C RIR+ K L EM E+++ +D ++L+N Y
Sbjct: 342 NSILRKLCSDGRIRDANK---LLHEMSERKV--------------QADSVTCNTLINAYC 384
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
GD+ A ++ G S T I+G K + AKE+L M+
Sbjct: 385 KIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAG--FSPN 442
Query: 215 HTTYDALIEN-CSNNEFKSLVELVKGFRMRGL 245
+ TY ++++ C + +++ L F +G
Sbjct: 443 YRTYSWIVDSYCKKDNTDAVLALPDEFLSKGF 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 129/332 (38%), Gaps = 54/332 (16%)
Query: 1 MLWRGLSP--DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
M+W+ +G +++ Y LI+A + + + ++M GV+PD
Sbjct: 183 MVWKVYKRMVQDGVVPNIY-VYNCLIHACSKSRDVERAEFILNEMEVKGVVPD------- 234
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+ TYN LI YC G EAL + M G++ D VSYN +I GFC+ GK E
Sbjct: 235 IFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCK---EGKMREAMR 291
Query: 119 EMDEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQ 156
E + V Y +L+ G + Y+S++ +
Sbjct: 292 MFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSD 351
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G + A L E++ ++SVT + IN K A + M+ +
Sbjct: 352 GRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNS--F 409
Query: 217 TYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
TY ALI C +E +S EL+ G ML P+ Y++++ +
Sbjct: 410 TYKALIHGFCKTSELESAKELLFG----------------MLDAGFSPNYRTYSWIVDSY 453
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ N D + + GF ++ ALI
Sbjct: 454 CKKDNTDAVLALPDEFLSKGFCLNISLYRALI 485
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 49/299 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+N+ G S V ++ +M+ +GV+P+ + YN LI+ VE A IL
Sbjct: 171 LMNSLLKDGITSMVWKVYKRMVQDGVVPN-------IYVYNCLIHACSKSRDVERAEFIL 223
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD--EKRILRMEEVVYESLMQGL 140
M G+ PD +YN +I+ +C+ G YE D E+ + ++ V Y SL+ G
Sbjct: 224 NEMEVKGVVPDIFTYNTLIALYCK---KGLHYEALSVQDKMEREGINLDIVSYNSLIYGF 280
Query: 141 SDE--------------DA------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E DA Y++L++ Y + E+A L + G VT
Sbjct: 281 CKEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVT 340
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ + L R R+A ++L M + + C+ L+ +
Sbjct: 341 YNSILRKLCSDGRIRDANKLLHEMSERKVQADSV---------TCNT--------LINAY 383
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G ++ A + ML P+ Y LI C+ ++ A + M+ GF P+
Sbjct: 384 CKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPN 442
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 47/299 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R + P+ TY +L I C G+ L +M GV +LV
Sbjct: 348 MSQRDIVPNAHTYGAL-------IGGVCKAGQMEAAEILLLEMQSKGV-------DLNLV 393
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+N + GYC G+++EAL + M + G++ D +YNI+ +G C++ +A + M
Sbjct: 394 IFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM 453
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
EK + VV ++ + Y +G++ +A L R++ G + +T
Sbjct: 454 VEKGV--KPNVV------------TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIIT 499
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVKG 239
+ I+ KK + ++A +I MI+ L TY +LI C ++L
Sbjct: 500 YNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL--YTYSSLIHGECIVGRVDEALKLFNE 557
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
R++G+ A + +M+ G K D+A+ +Y M+ G +P
Sbjct: 558 MRLKGITRNVA-TYTSMISGLSKEG---------------RADEAFKLYDEMMKIGLIP 600
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 67/335 (20%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVL-PDFVTGSP------------------------ 57
+I+ C GE K L D+M+ G++ P+ T +
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 58 ----SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
S+ TY+ LI Y G +EEA I M E + D Y+ +IS R+ +A
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRA 341
Query: 114 YELKMEMDEKRIL-----------------RME--EVVYESLMQGLSDED--AYSSLMND 152
+ L EM ++ I+ +ME E++ + D + +++ M+
Sbjct: 342 FALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDG 401
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
Y +G M++A L + G ++ T ++ NGL K R EAK IL SM+ K
Sbjct: 402 YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV--K 459
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
T+ IE + G ++EA R M P+ YN LI
Sbjct: 460 PNVVTFTMFIE---------------IYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI 504
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+C+ + V +A+ + + M++ G +P +++ +LI
Sbjct: 505 DAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLI 539
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 141/356 (39%), Gaps = 72/356 (20%)
Query: 1 MLWRGL-SPDEGTYSSLFNAY----------------------FS------LINAYCLGG 31
M+ +G+ P+ TY++L NAY FS LI Y G
Sbjct: 242 MVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSG 301
Query: 32 EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLS 91
+ + + ++M + D + Y+++I LG ++ A + M + +
Sbjct: 302 DIEEAEKIFEEMREKNIEMD-------VYVYSSMISWSRRLGNMKRAFALFDEMSQRDIV 354
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
P+A +Y +I G C+ + A L +EM K + + V++ + M G
Sbjct: 355 PNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV-DLNLVIFNTTMDG------------ 401
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y +G M++A L + G ++ T ++ NGL K R EAK IL SM+
Sbjct: 402 -YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV-- 458
Query: 212 KTTHTTYDALIE------NCSNNE--FKSLVE------------LVKGFRMRGLVSEAAR 251
K T+ IE N + E F+ + + L+ + + V +A +
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHK 518
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M++ PD Y+ LI C VD+A ++ M G ++ + ++I
Sbjct: 519 IKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 40/277 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+ C G + D M G LPD +V+Y+A I G + V+ A+ I
Sbjct: 526 LVKELCDHGRVIEACEFLDNMTQQGFLPD-------IVSYSAAIGGLVNIQEVDHAMKIF 578
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ + G PD V +N++I G C++ R E++ +E + +GLS
Sbjct: 579 KDLWSHGHCPDVVCFNVLIRGLCKV---------------NRFTEAEDLFHELVKRGLSP 623
Query: 143 ED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y+ ++ + G+++KA + + + VT + ++G K+ R +A +
Sbjct: 624 SVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLF 683
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M N C T+ ALI L K R +EA M
Sbjct: 684 KEMEKNGC--PPNQITFMALIYG-----------LCKCCR----PTEALCYLREMQQKEM 726
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
KPD +Y L+ + N+ A+ ++ MV GF P
Sbjct: 727 KPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFP 763
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 38/272 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+++ YN LI C R+E++ +LR M E+G+ P +YN + C+ ++ A +
Sbjct: 448 PTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVM 507
Query: 117 KMEM--------------------DEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLA 155
EM D R++ E + QG L D +YS+ + +
Sbjct: 508 LKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVN 567
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
+++ A + +++ G+ + V +V I GL K R EA+++ ++ LS +
Sbjct: 568 IQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRG-LSPSV- 625
Query: 216 TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
TY+ I+ N G V +A M + P Y L+
Sbjct: 626 VTYNLFIDCWCKN---------------GNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGF 670
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ + D A ++ M G P+ + +ALI
Sbjct: 671 CKEERPDDAILLFKEMEKNGCPPNQITFMALI 702
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI C F++ +L +++ G+ SPS+VTYN I +C G V++A+ L
Sbjct: 596 LIRGLCKVNRFTEAEDLFHELVKRGL-------SPSVVTYNLFIDCWCKNGNVDKAMAHL 648
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL-- 140
M + P V+Y ++ GFC+ P A L EM EK ++ + +L+ GL
Sbjct: 649 FRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEM-EKNGCPPNQITFMALIYGLCK 707
Query: 141 --------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D Y +L++ YL+ ++ A+ + RE+ G+ + +
Sbjct: 708 CCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFPKPLD 767
Query: 181 ES 182
++
Sbjct: 768 KN 769
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMP-EMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
T+ LI+G+ RV++AL + M E +PD Y+++I G C+ ++ +A L E
Sbjct: 256 TFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSE 315
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDA-YSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
M E + R + + L+ SD + S L+ + + E+ +L Y+++
Sbjct: 316 MKEFGV-RPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDG 374
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE--- 235
+ + EA ++ MI + + + D + F ++
Sbjct: 375 LMD--------------EAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSI 420
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
++ GF + A + M KP +YN LI C+ ++K+Y + M G
Sbjct: 421 VIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELG 480
Query: 296 FVPHMFS 302
P F+
Sbjct: 481 IEPTHFT 487
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 55/339 (16%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
Y+++ NA + I CL G+ + L +M+ GVLPD + T+N ++ G C
Sbjct: 128 YNNVENA--ATIRFLCLEGKLAAAWWLRIKMMEKGVLPD-------VYTHNHIVNGLCEN 178
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD----------- 121
GR+E A ++R M + G P+ ++YN +I G+ + KA +L M
Sbjct: 179 GRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTC 238
Query: 122 -------------EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
EK +++++ + + D A ++LM++Y G +A L E
Sbjct: 239 NIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNE 298
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSN 227
+ + V +V ING+ + + A M+ + TY+ LI C
Sbjct: 299 MIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDV--FTYNILIHALCKE 356
Query: 228 NEFK-------------------SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
+ S ++ G + G V A ML+ P ++
Sbjct: 357 GKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQAIIW 416
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N +I + RC+++ A+ +M+ G +P++F+ ALI
Sbjct: 417 NLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 455
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 63/335 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGE 32
ML G P+ TY++L Y++ ++ A C G
Sbjct: 191 MLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGH 250
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
K N+ D+++++ D +P LV L+ Y G+ +ALG+ M +
Sbjct: 251 LEKARNMLDKILND----DNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKV 306
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YN++I+G CR ++ AY EM +K ++ + Y L+ L E S
Sbjct: 307 DVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIP-DVFTYNILIHALCKEGKISEAC-- 363
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
YL G M K I+ +I++ + I+GL AK++LL M++N + +
Sbjct: 364 YLF-GVMSKMRIIPDQISY----------KMMIHGLCLNGDVLRAKDLLLCMLNNFMVPQ 412
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
A+I N + + +L F R D ML P+ YN LI
Sbjct: 413 -------AIIWNLIIDSYGRCEDLRNAFLTR----------DQMLASGVLPNVFTYNALI 455
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + N+ A+++ M P + + LI
Sbjct: 456 LAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLI 490
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 50/310 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ A C G K N+ D+++++ D +P LV L+ Y G+ +ALG+
Sbjct: 241 IVRALCEKGHLEKARNMLDKILND----DNGEATPDLVASTTLMDNYFKNGKSNQALGLW 296
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + D V+YN++I+G CR ++ AY EM +K ++ + Y L+ L
Sbjct: 297 NEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIP-DVFTYNILIHALCK 355
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
E S YL G M K I+ +I++ + I+GL AK++LL
Sbjct: 356 EGKISEAC--YLF-GVMSKMRIIPDQISY----------KMMIHGLCLNGDVLRAKDLLL 402
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR------------------- 243
M++N + + A+I N + + +L F R
Sbjct: 403 CMLNNFMVPQ-------AIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 455
Query: 244 ------GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G + A + M N +PD YN LI ++D A+ + MV G
Sbjct: 456 LAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGRE 515
Query: 298 PHMFSVLALI 307
P + + I
Sbjct: 516 PDLITCTEFI 525
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 121/285 (42%), Gaps = 33/285 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY LIN C + +M+ G++PD + TYN LI+ C G++ EA
Sbjct: 310 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPD-------VFTYNILIHALCKEGKISEA 362
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M +M + PD +SY ++I G C + +A +L + M + + +++ ++
Sbjct: 363 CYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCM-LNNFMVPQAIIWNLII- 420
Query: 139 GLSDEDAY---SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING--LSKKAR 193
D+Y L N +L + M + +L ++ + + N L ++ R
Sbjct: 421 -----DSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMR 475
Query: 194 TREAK------EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVS 247
T+ + +L+ N H D +++ + + E ++G+ + G +
Sbjct: 476 TKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGYCIIGNIE 535
Query: 248 EA----ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
EA AR + L +H P ++N ++C+ +A+N Y
Sbjct: 536 EAEERYARILKSGLWSDHVPVQILFN----KYCKLGEPIRAFNFY 576
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 130/326 (39%), Gaps = 56/326 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G +PD TY+ L I A C G+ + ++ D M G+ P+ L TYN
Sbjct: 370 GYAPDVVTYTIL-------IEALCKSGDVDRAFDMLDVMTTKGIFPN-------LHTYNT 415
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK- 123
+I G R++EAL +L M +G+ P A SY + I + + +P KA + M ++
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 124 -------------------RILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAY 163
RI E++ + GLS D Y+ LM Y G ++KA
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
L E+ G + + + IN L K R A + + + N L+ T TY+ L+
Sbjct: 536 QLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWK-MFGRLKNLKLAPTV-VTYNILLT 593
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN--V 281
G G + +A +M P+ +N L+ C KN V
Sbjct: 594 ---------------GLGKEGKILKALELFGSMTESGCPPNTITFNSLL--DCLSKNDAV 636
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
D A M+ RM P + + +I
Sbjct: 637 DLALKMFCRMTMMNCNPDVLTYNTII 662
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG P+ T++ + I+A +K +L+ +++ DF SP+
Sbjct: 857 MRSRGCEPNAITHNII-------ISALVKSNNLNKALDLYYELMSG----DF---SPTPC 902
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G GR E+A+ I M + G P++V YNI+I+GF + E A EL +M
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ I D +Y+ L+ G +++A E+ G ++V+
Sbjct: 963 VKEGI--------------RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ INGL K R EA L S + N +S + TY+ALI +
Sbjct: 1009 YNFIINGLGKSRRLDEALS-LFSEMKNRGISPDLY-TYNALILHLG-------------- 1052
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G V A + ++ + +P YN LI H N D+A++++ +M+ G P+
Sbjct: 1053 -IAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 140/352 (39%), Gaps = 65/352 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
M+ G+ P TYS+L A LG G+ K+ NL ++M G+ P+
Sbjct: 226 MISEGMKPSMKTYSALMVA---------LGRRGDTRKIMNLLEEMKSIGL-------RPN 269
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+ TY I R+++A GI + M + G PD ++Y ++I C + KA EL +
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329
Query: 119 EMDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQ 156
+M + V Y +LM D Y+ L+
Sbjct: 330 KMRASS-HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
GD+++A+ + + G T + I GL K R EA E+L +M S K T
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENM--ESLGVKPTAF 446
Query: 217 TYDALIE--NCSNNEFKSLVELVKGFRMRGL-------------------VSEAARAHDT 255
+Y I+ S + K+ ++ + + RG+ +SEA +
Sbjct: 447 SYVLFIDYYGKSGDPAKA-IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ PD YN L+ + + +DKA + + M+ G P + + +LI
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 39/289 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y I+ Y G+ +K + + M G++P S+ NA +Y GR+ EA
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP-------SIAACNASLYTLAETGRISEA 499
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
I + + GLSPD+V+YN+++ + + + KA +L EM K
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC------------- 546
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D +SL+N G ++ A+ + + + VT ++ + GL K+ + +A
Sbjct: 547 -EPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
E+ SM + C T T+++L++ S N+ V A + M
Sbjct: 606 ELFGSMTESGCPPNT--ITFNSLLDCLSKND---------------AVDLALKMFCRMTM 648
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N PD YN +I R +D A+ + +M + P ++ LI
Sbjct: 649 MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLI 696
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 119/307 (38%), Gaps = 46/307 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHN-GVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
LI C + N+ D+ N G+ P+L +YN L+ G E+AL +
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGI-------HPTLESYNCLMDGLLGSNFTEKALEL 818
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK------------------ 123
M G P+ +YN+++ + + K Y+L EM +
Sbjct: 819 FEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK 878
Query: 124 --RILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + ++ YE + S Y L++ L G E+A + E+ G SV
Sbjct: 879 SNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ ING K A E+ M+ + KS LV+
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGI-----------------RPDLKSYTILVECL 981
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ G + EA + + + PD YNF+I + + +D+A ++++ M + G P +
Sbjct: 982 CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041
Query: 301 FSVLALI 307
++ ALI
Sbjct: 1042 YTYNALI 1048
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 100/272 (36%), Gaps = 41/272 (15%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYN----IVISGFCRIREPGKA 113
+L TY + G + A LR M E+G +A SYN +++ GFC E K
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCN--EALKV 222
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
Y+ ++ E + + YS+LM +GD K L E+ G
Sbjct: 223 YK--------------RMISEGMKPSMK---TYSALMVALGRRGDTRKIMNLLEEMKSIG 265
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY--DALIENCSNNEFK 231
T ++ I L + R +A I M C T DAL ++ K
Sbjct: 266 LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAK 325
Query: 232 SL----------------VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
L + L+ F G + R + M + PD Y LI
Sbjct: 326 ELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ +VD+A++M M G P++ + +I
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 43/246 (17%)
Query: 38 NLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSY 97
+L+ +M+ +G+ SP++VTY ALI G+C +G++EEALG+ + M ++P+ ++
Sbjct: 12 DLYYEMVASGI-------SPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTF 64
Query: 98 NIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYL 154
N ++ FC +I E ME D K SD AYSSLMN Y
Sbjct: 65 NGLVDAFCKEGKIEEAKNVLNTMMEKDLK-----------------SDVVAYSSLMNGYC 107
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK-- 212
++ KA + + +A + + ++ IN K EA ++ M
Sbjct: 108 LVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVV 167
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRG----------LVSEAARAHDTML-HGNH 261
T HT D L C + +ELV RG +V + HD +L G
Sbjct: 168 TYHTLIDGL---CKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHDGVLSSGKS 224
Query: 262 KPDGGV 267
P G+
Sbjct: 225 LPSCGL 230
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY SL+N YCL E K ++ M + S + +YN +I +C + V+EA
Sbjct: 98 AYSSLMNGYCLVNEVFKAQSIFKTMAEREL-------SYDVRSYNIMINEFCKMKMVDEA 150
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+ + MP + PD V+Y+ +I G C+ A EL EMD++
Sbjct: 151 IKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDR 195
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +GL P+E TY+ + I YC +F++ L+D M G + ++V
Sbjct: 332 MIQKGLVPNEYTYNVM-------IYGYCKVRDFAEARKLYDDMCGRGY-------AENVV 377
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y+ +I G G+ +EAL + M G++ D +SYN +I G C+ E KA L ++
Sbjct: 378 SYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKL 437
Query: 121 DEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE-S 178
L+QGL +++ L+ GD E A L +++ HD +L +
Sbjct: 438 ---------------LIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDM-HDRHLEPIA 481
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
T I GLSKK + E LL M+S K T++ LI+
Sbjct: 482 STHDYMIIGLSKKGDFAQGMEWLLKMLSWKL--KPNMQTFEHLID 524
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 47/321 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD+ + ++LF+A L++A G +L + PDFV + SL Y
Sbjct: 92 GFKPDQSSCNALFDA---LVDA----GAVKAAKSLLE-------YPDFVPKNDSLEGYVR 137
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G VEE + + ++G P A S+N+ + ++ ++L
Sbjct: 138 LLGEN---GMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLY------- 187
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
E++ ES + D + L+ + A+ + Y L R++ G ++ +
Sbjct: 188 -----ELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNAL 242
Query: 185 INGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNE----FKSLVE--- 235
ING K+ + EIL MI+ C T + L++ N+E F L +
Sbjct: 243 INGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGY 302
Query: 236 ---------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
++KGF GL++EA + M+ P+ YN +I +C+ ++ +A
Sbjct: 303 FPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARK 362
Query: 287 MYTRMVHYGFVPHMFSVLALI 307
+Y M G+ ++ S +I
Sbjct: 363 LYDDMCGRGYAENVVSYSTMI 383
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 138/327 (42%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +GL D +++FNA LIN +C ++ +VS + MI + +PS+
Sbjct: 227 VLEKGLCVD----NTVFNA---LINGFCKQKQYDRVSEILHIMIA-------MKCNPSIY 272
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +I G + +EA + + + G PD V Y VI GFC + +A +L EM
Sbjct: 273 TYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEM 332
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + + +E Y+ ++ Y D +A L ++ GY V+
Sbjct: 333 IQKGL--------------VPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVS 378
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
S I+GL +T EA + M S +++ +Y++LI+ C E L+
Sbjct: 379 YSTMISGLYLHGKTDEALSLFHEM-SRKGIARDL-ISYNSLIKGLCQEGELAKATNLLNK 436
Query: 240 FRMRG----------LVSEAARAHDTM--------LHGNH-KPDGGVYNFLIVEHCRCKN 280
++G L+ + DT +H H +P ++++I+ + +
Sbjct: 437 LLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGD 496
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ +M+ + P+M + LI
Sbjct: 497 FAQGMEWLLKMLSWKLKPNMQTFEHLI 523
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 33/261 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD +Y+ L + YF L G+ + + + + G + PS+
Sbjct: 103 MLQSGIRPDVWSYNILMHCYFRL-------GKPEEANGVFRDIFERGEI------YPSMA 149
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G C G V AL + R + G P+ ++YN +I+G C+ R
Sbjct: 150 SYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLA--------- 200
Query: 121 DEKRIL-RMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
D +R+L + +E + Y+++M G +E+ + E+ G+ +
Sbjct: 201 DARRVLNEFCDFGFE------PNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGF 254
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVK 238
+ L K R EA EI M+SN + +Y+ +I C F + LV
Sbjct: 255 AYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDL--ASYNTMINLFCRQGRFDEALRLVD 312
Query: 239 GFRMRGLVSEAARAHDTMLHG 259
+G+ + H ++HG
Sbjct: 313 EIEKQGMKCDQY-THTIIIHG 332
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 124/315 (39%), Gaps = 53/315 (16%)
Query: 24 INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILR 83
I+ C + +K + I G+ PD ++TYN LI GYC ++ A IL
Sbjct: 14 ISTMCKSNQIAKAETVLIDGIKLGLNPD-------IITYNTLIDGYCRFVGIDAAYNILN 66
Query: 84 GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ----- 138
M E G++PD VSYN + SG R K+ +L EM + I R + Y LM
Sbjct: 67 RMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGI-RPDVWSYNILMHCYFRL 125
Query: 139 GLSDE------------------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
G +E +Y+ ++N G + A +L R + G++ E +T
Sbjct: 126 GKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLT 185
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN-NEFKSLVELVKG 239
+ INGL K R +A+ +L + TY +++ C + +E++
Sbjct: 186 YNAMINGLCKARRLADARRVLNEFCDFG--FEPNAITYTTVMKCCFRCGRLEQGLEILSE 243
Query: 240 FRMRGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
R +G + EA + M+ PD YN +I CR
Sbjct: 244 MRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGR 303
Query: 281 VDKAYNMYTRMVHYG 295
D+A + + G
Sbjct: 304 FDEALRLVDEIEKQG 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY +++ A G + + ++M+ NG++PD L +YN +I +C GR +EA
Sbjct: 255 AYCTVVAALVKTGRIEEADEIAEKMMSNGLVPD-------LASYNTMINLFCRQGRFDEA 307
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L ++ + + G+ D ++ I+I G C+ + E EK + M + + +
Sbjct: 308 LRLVDEIEKQGMKCDQYTHTIIIHGLCK--------DGNFEGAEKHLDYMNTLGFGFNLV 359
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
A++S+++ GD++KA ++ + +S T + ++ L + + R A
Sbjct: 360 ------AFNSILDCLGKAGDIDKAV----KVFDSMEVKDSFTYTSLLHNLCRAKKFRIAS 409
Query: 199 EILLSMISN--SCLSKTTHTTYDAL 221
++L++ I + L T D L
Sbjct: 410 KLLVASIEDGFQILRATQRAVIDGL 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 41/268 (15%)
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N I C ++ +A +L ++GL+PD ++YN +I G+CR AY + M E
Sbjct: 11 NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70
Query: 123 KRILRMEEVVYESLMQG------------LSDED----------AYSSLMNDYLAQGDME 160
I + V Y SL G L DE +Y+ LM+ Y G E
Sbjct: 71 AGI-NPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPE 129
Query: 161 KAYILDREIAHDGYLSESVTE-SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
+A + R+I G + S+ +V INGL K A + ++ + + TY+
Sbjct: 130 EANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEV--LTYN 187
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
A+I L K R+ ++A R + +P+ Y ++ RC
Sbjct: 188 AMING-----------LCKARRL----ADARRVLNEFCDFGFEPNAITYTTVMKCCFRCG 232
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+++ + + M GF F+ ++
Sbjct: 233 RLEQGLEILSEMRRKGFTFDGFAYCTVV 260
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 39/266 (14%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V+YN + G+C + R AL +L+ M E G+ P V+YN ++ G+ R + +A+E +E
Sbjct: 205 VSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLE 264
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M +KR ++ V Y +++ G G+++++ + + +G +
Sbjct: 265 M-KKRKCEIDVVTYTTMVHGFG-------------VAGEVKRSKRVFDAMVKEGLVPSVA 310
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T + I L KK + A + M+ C+ TTY+ +I C + E + VE +K
Sbjct: 311 TYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNL--TTYNVVIRGLCHSGEIERGVEFMK 368
Query: 239 GFRMRGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLI-VEHCRC 278
G + + + M +G P+ YN LI R
Sbjct: 369 RMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILISAMFVRK 428
Query: 279 KNVD--KAYNMYTRMVHYGFVPHMFS 302
K+ D A + MV GF+P F+
Sbjct: 429 KSEDLVLAGKLLIEMVGRGFLPRKFT 454
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 52/243 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
M+ RG+ P TY++L YF ++++ + + GE
Sbjct: 230 MVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 289
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + D M+ G++ PS+ TYNALI C V+ AL + M G P
Sbjct: 290 VKRSKRVFDAMVKEGLV-------PSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVP 342
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ +YN+VI G C E + E M+E + Y+ ++
Sbjct: 343 NLTTYNVVIRGLCHSGEIERGVEFMKRMEENGC--------------MPSVQTYNVVIRY 388
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE---AKEILLSMISNSC 209
Y +G++EK L ++ + L T ++ I+ + + ++ + A ++L+ M+
Sbjct: 389 YCDEGELEKGLELFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGF 448
Query: 210 LSK 212
L +
Sbjct: 449 LPR 451
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 35/206 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL P TY++L I C + D+M+ G +P+ L
Sbjct: 300 MVKEGLVPSVATYNAL-------IQVLCKKDSVQNALLVFDEMVGKGCVPN-------LT 345
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN +I G C G +E + ++ M E G P +YN+VI +C E K EL
Sbjct: 346 TYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLEL---- 401
Query: 121 DEKRILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDR---EIAHDGYL 175
+E + G L + D Y+ L++ + E + + E+ G+L
Sbjct: 402 ------------FEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFL 449
Query: 176 SESVTESVFINGLSKKARTREAKEIL 201
T + +NGL A EIL
Sbjct: 450 PRKFTFNRVLNGLVLTGNREFANEIL 475
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++A C G + ++L + M + +P++ + +L+YG+C G++ EA +L
Sbjct: 225 LLDALCKNGSVKEAASLFEDMRYKF--------TPTVKHFTSLLYGWCKEGKLVEAKHVL 276
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + G+ PD V +N ++ G+ + + G AY+L EM K G
Sbjct: 277 VQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRK---------------GCEP 321
Query: 143 EDA-YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
A Y+ L+ +E+A + E+ G + +T + I+G K + + E L
Sbjct: 322 NAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYE-L 380
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
L + S T ++ + E + +ELV + G V
Sbjct: 381 LDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCV--------------- 425
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD +YN +I C+ V + ++ M G P + + + +I
Sbjct: 426 -PDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMI 470
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 120/316 (37%), Gaps = 47/316 (14%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQM-IHNGVLPDFVTGSPSLVTYNAL 65
+ + +Y Y ++I +F V L D+M + N L SP + + L
Sbjct: 138 ASKQTSYRHSQEVYKAMIKVLSKMRQFGAVWGLIDEMRVENSELI-----SPQV--FVIL 190
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYE------- 115
+ + V +A+ +L MP+ G D + ++ C+ ++E +E
Sbjct: 191 MRRFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFEDMRYKFT 250
Query: 116 ---------LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYIL 165
L E +++ + V+ + G+ D +++L+ Y G M AY L
Sbjct: 251 PTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDL 310
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTTHTTYDALIEN 224
+E+ G + + +V I L K + EA + + M + C + T+TT
Sbjct: 311 LKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTT------- 363
Query: 225 CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
L+ GF G + D M H P+ Y ++V H + + +++
Sbjct: 364 -----------LISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEEC 412
Query: 285 YNMYTRMVHYGFVPHM 300
+ M G VP +
Sbjct: 413 MELVNEMQKIGCVPDL 428
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 124/333 (37%), Gaps = 68/333 (20%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +++ C L D M+ NGV PD VTY L++GYC G+V EA
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD-------TVTYTTLLHGYCSKGKVFEA 417
Query: 79 LGILRGMPEMGLSP-----------------------------------DAVSYNIVISG 103
IL M G P D V+ NIV++G
Sbjct: 418 KAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNG 477
Query: 104 FCRIREPGKAYELKMEM--DEKRILRMEEVV------YESLMQGLSDEDAYSSLMNDYLA 155
CR E KA E+ EM D L E V ++ + D Y++L+N
Sbjct: 478 LCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCK 537
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
G +E+A E+ +SVT F+ K+ + A +L M N C SKT
Sbjct: 538 VGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGC-SKTLQ 596
Query: 216 TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
TY++LI G +G + E D M PD YN +I
Sbjct: 597 -TYNSLI---------------LGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640
Query: 276 CRCKNVDKAYNMYTRMVHYGFV-PHMFSVLALI 307
C A ++ M+ G V P++ S LI
Sbjct: 641 CEGGKTKDATSLLHEMLDKGVVSPNVSSFKILI 673
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 128/338 (37%), Gaps = 70/338 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ G++P+ TY+ FN LI + C L D+M G P+ T
Sbjct: 142 MIQTGVNPE--TYT--FNL---LIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVR 194
Query: 55 --------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDA 94
G+ + V YN L+ +C +EA ++ M E GL PD
Sbjct: 195 GFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254
Query: 95 VSYNIVISGFCRIREPGKAYELK-----MEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
V++N IS CR GK +E M+MD + L VV +LM
Sbjct: 255 VTFNSRISALCR---AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLM------------ 299
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
+ + +G ME+A L + G + + ++ GL + + E + +L
Sbjct: 300 LKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVL-------- 351
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
D ++EN S ++ G ++ +A R D M+ PD Y
Sbjct: 352 ---------DEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYT 402
Query: 270 FLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
L+ +C V +A + M+ G P+ ++ L+
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLL 440
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 14 SSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
S Y SLI G+ ++ L D+M G+ PD + TYN +I C G
Sbjct: 592 SKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD-------ICTYNNMINCLCEGG 644
Query: 74 RVEEALGILRGMPEMG-LSPDAVSYNIVISGFCRIREPGKAYEL---------------K 117
+ ++A +L M + G +SP+ S+ I+I FC+ + A EL
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYS 704
Query: 118 MEMDE----KRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
+ +E ++ +E+ SL + LS Y L++ G ++ A+ L +++
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764
Query: 173 GYLSESVTESVFINGLSKKARTREAKEI 200
GY + + I+GLSK+ ++A E+
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQADEL 792
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGK 112
SP++VTY ALI G+C +G++EEALG+ + M ++P+ ++N ++ FC +I E
Sbjct: 28 SPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKN 87
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
ME D K SD AYSSLMN Y ++ KA + + +A
Sbjct: 88 VLNTMMEKDLK-----------------SDVVAYSSLMNGYCLVNEVFKAQSIFKTMAER 130
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEF 230
+ + ++ IN K EA ++ M T HT D L C +
Sbjct: 131 ELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGL---CKSGRL 187
Query: 231 KSLVELVKGFRMRG----------LVSEAARAHDTML-HGNHKPDGGV 267
+ELV RG +V + HD +L G P G+
Sbjct: 188 SYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHDGVLSSGKSLPSCGL 235
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY SL+N YCL E K ++ M + S + +YN +I +C + V+EA
Sbjct: 103 AYSSLMNGYCLVNEVFKAQSIFKTMAEREL-------SYDVRSYNIMINEFCKMKMVDEA 155
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+ + MP + PD V+Y+ +I G C+ A EL EMD++
Sbjct: 156 IKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDR 200
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 132/321 (41%), Gaps = 51/321 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ +LI ++C+ G S+ + +M G+ S + + YN L+ YC RVEEA
Sbjct: 321 AFGALIKSFCVEGLLSEALIIQSEMEKKGI-------SSNAIVYNTLMDAYCKSNRVEEA 373
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE---------------- 122
G+ M G+ P AV++NI++ + R +P L EM +
Sbjct: 374 EGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISA 433
Query: 123 -KRILRMEEVVYESLMQ----GLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
R +M ++ ++ ++ G+ +Y+++++ Y G EKAY + + +G
Sbjct: 434 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKP 493
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN----EFKS 232
T + ++ + T +I M+S K T T++ L++ + E +
Sbjct: 494 SIETYTTLLDAFRRVGDTETLMKIWKLMMSEKV--KGTQVTFNILVDGFAKQGLFMEARD 551
Query: 233 LVE----------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
++ L+ + GL S + M +PD Y+ +I
Sbjct: 552 VISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTVIYAFV 611
Query: 277 RCKNVDKAYNMYTRMVHYGFV 297
R ++ +A+ + MV G+V
Sbjct: 612 RVRDFKRAFFYHKEMVKSGYV 632
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK-AYELKMEM 120
YNA I G + GR ++A + M G+ PD V+ +I+I G ++ K A++ +M
Sbjct: 251 YNAAISGLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKM 310
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++K + +E A+ +L+ + +G + +A I+ E+ G S ++
Sbjct: 311 NQKGVRWGKE--------------AFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIV 356
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++ K R EA+ + + M + K T T++ L+ S
Sbjct: 357 YNTLMDAYCKSNRVEEAEGLFVEMKAKGI--KPTAVTFNILMYAYSR------------- 401
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV-DKAYNMYTRMVHYGFVPH 299
RM+ + E+ A M KP+ Y LI + R K + D A + + +M G P
Sbjct: 402 RMQPKIVESLLAE--MKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 459
Query: 300 MFSVLALI 307
S A+I
Sbjct: 460 SHSYTAMI 467
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 42/186 (22%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL------------------ 59
++Y ++I+AY + G K + + MI G+ P T + L
Sbjct: 461 HSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKL 520
Query: 60 ----------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
VT+N L+ G+ G EA ++ ++GL P ++YN++I+ + R
Sbjct: 521 MMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGL 580
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+L EM+ R+ D YS+++ ++ D ++A+ +E+
Sbjct: 581 DSNIPQLLKEMEALRLR--------------PDSITYSTVIYAFVRVRDFKRAFFYHKEM 626
Query: 170 AHDGYL 175
GY+
Sbjct: 627 VKSGYV 632
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 36/244 (14%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
++ T++ L+ Y G EA+ M + G PD VS++IVIS C+ R +A
Sbjct: 177 TVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEA---- 232
Query: 118 MEMDEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
E+ ++SL D Y+SL++ + GD+ KA + ++ G
Sbjct: 233 ------------ELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKP 280
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
T S+ I+ L + + A ++ MI C F SL+ +
Sbjct: 281 NVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAV--------------TFNSLMRV 326
Query: 237 -VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
VK G + + ++ M D YNFLI HC+ +N+D+A + MV G
Sbjct: 327 HVKA----GRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 296 FVPH 299
P+
Sbjct: 383 VAPN 386
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 53/309 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD+ ++S + I++ C S+ D + H P ++ Y +
Sbjct: 208 GCKPDKVSFSIV-------ISSLCKKRRASEAELFFDSLKHKF--------EPDVIVYTS 252
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L++G+C G + +A + M E G+ P+ +Y+IVI CR + +A++
Sbjct: 253 LVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHD--------- 303
Query: 125 ILRMEEVVYESLMQGLSDEDA--YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
V+ ++ D +A ++SLM ++ G EK + ++ G +++++ +
Sbjct: 304 -------VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYN 356
Query: 183 VFINGLSKKARTREAKEILLSMISN-------------SCLSKT-----THTTYDALIE- 223
I K EA ++L +M+ C+++ H Y + E
Sbjct: 357 FLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKEL 416
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
C N + L++ F + + M +P+ Y LI+ C + +
Sbjct: 417 KCMPNTLTYNI-LMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNN 475
Query: 284 AYNMYTRMV 292
AYN+ MV
Sbjct: 476 AYNLMKEMV 484
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G++P+ T++S+F L + ++K+ L P+ +
Sbjct: 378 MVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKEL--------------KCMPNTL 423
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ + ++ L + + M E + P+ +Y I+I FC AY L EM
Sbjct: 424 TYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEM 483
Query: 121 DEKRILRMEEVVYESLMQGLSDE---DAYSSLMNDYLAQG 157
E++ L+ +YE++++ L + + L+ +A+G
Sbjct: 484 VEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARG 523
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 40/263 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LIN YC G+ ++ +++ G P+ +T L+ G+C +V+EAL
Sbjct: 86 LINCYCHLGQMRFAFSIFAKILKMGY-------HPNTITLTTLVKGFCLNHKVKEALHFH 138
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ +G + VSY +I+G C+I E A ++ ++ E +++R V+Y +++ GL
Sbjct: 139 DHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQI-EGKLVRTNVVMYSTIIDGLCK 197
Query: 143 E----DAY------------------SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ DAY +SL+ Y G ++A+ L RE+ + T
Sbjct: 198 DKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYT 257
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEF---KSLVEL 236
++ ++ L K+ + +EAK + M+ + TY +L++ C NE K ++ +
Sbjct: 258 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDV--VTYSSLMDGYCLVNEVNKAKHVLSI 315
Query: 237 VKGFRMRGLVSEAARAHDTMLHG 259
+ RMR V+ AR++ +++G
Sbjct: 316 IS--RMR--VAPNARSYSIVING 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C + L+ +MI + SP++VT N+LIYGYC +G+ +EA
Sbjct: 188 YSTIIDGLCKDKLVNDAYELYSEMITKRI-------SPTVVTLNSLIYGYCIVGQFKEAF 240
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G+LR M ++PD ++NI++ C+ GK E K + + M+E V
Sbjct: 241 GLLREMVLKNINPDVYTFNILVDALCK---EGKIKEAKSGIA----VMMKEGV------- 286
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+ D YSSLM+ Y ++ KA + I+ + + S+ ING
Sbjct: 287 MPDVVTYSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVINGF 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++PD T++ L ++A C G+ + + M+ GV+PD +V
Sbjct: 246 MVLKNINPDVYTFNIL-------VDALCKEGKIKEAKSGIAVMMKEGVMPD-------VV 291
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF 104
TY++L+ GYC + V +A +L + M ++P+A SY+IVI+GF
Sbjct: 292 TYSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVINGF 335
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 51 DFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
+F+ P+LVTY A++ C LGRV+E G++R M E GL D V Y++ + G+ +
Sbjct: 190 NFMGSRPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVL 249
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
+ + EM EK I D +Y+ L++ + GD+EK++ ++
Sbjct: 250 VEVFRKMREMVEKGICH--------------DFVSYTILIDGFSKLGDVEKSFTFLAKMI 295
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+G + VT + ++ KK R EA + + M
Sbjct: 296 KEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRM 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F +Y LI+ + G+ K +MI G++P+ VTY A++ YC GR+E
Sbjct: 268 FVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPN-------KVTYTAIMSAYCKKGRIE 320
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
EA G+ M +MG+ D + ++I GF R+ + + ++L +EM EKR + V Y ++
Sbjct: 321 EAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEM-EKRGIGPNVVTYNAV 379
Query: 137 MQGLS 141
+ GLS
Sbjct: 380 VNGLS 384
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y S+IN C G + L D + ++ S +TY LIY C G +++A
Sbjct: 752 YNSIINGLCHDGCLIEAFRLFDSLEKLNLMT-------SEITYATLIYALCREGYLQDAE 804
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + M G P YN ++ +I + KA+EL +M EK+ ++
Sbjct: 805 HVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDM-EKQYIKF----------- 852
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAY-----ILDREIAHD--GYLSESVTESVFINGLSKKA 192
D SS++N Y +GDME A ++I+ D G+L I GL K
Sbjct: 853 --DNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDFLGFL-------YMIRGLCTKG 903
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARA 252
R E + +L M+ + +++ + S + +S+ + + +G + EA +
Sbjct: 904 RMEETRSVLREMLQSKNVAEMINIVN-------SRVDTESICDFIAALCDQGRIQEAVKV 956
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSN----LHDQMIHNGVLPDFVTG---- 55
RG+ P+ TY+++ N S EFSK + ++H D V G
Sbjct: 367 RGIGPNVVTYNAVVNG-LSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQT 425
Query: 56 ---------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
S +V N LI + E+ + +GMPEM L P++++Y +I G+C+
Sbjct: 426 KKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCK 485
Query: 107 IREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILD 166
+ + +A E+ D+ R +S Y+S++N +G +E A
Sbjct: 486 VGKINEALEV---FDDFR------------KTSISSYACYNSIINGLCKKGMVEMAIEAL 530
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
E+ H G + ++ T + + + K+ ++ +++ M S
Sbjct: 531 LELDHKGLMLDTGTHRLLMKTIFKENSSKVVLDLVCRMES 570
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGV-LPDFVTGSPSL 59
M+ G+ P++ TY+ ++++AYC G + L +M G+ L +FV
Sbjct: 294 MIKEGIIPNKVTYT-------AIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFV------ 340
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
+ LI G+ +G + +L M + G+ P+ V+YN V++G + Y E
Sbjct: 341 --FVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSK-------YGRTQE 391
Query: 120 MDE-KRILRMEEVVYESLMQGLSDEDAYSSLMND-----------------------YLA 155
DE + + + V Y +L+ G ++ED ++ ++
Sbjct: 392 ADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMM 451
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
Q E Y L + + + S+T I+G K + EA E+ KT+
Sbjct: 452 QA-YEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDD------FRKTSI 504
Query: 216 TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
++Y C N+ ++ G +G+V A A + H D G + L+
Sbjct: 505 SSY-----ACYNS-------IINGLCKKGMVEMAIEALLELDHKGLMLDTGTHRLLM 549
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 125/294 (42%), Gaps = 36/294 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+EG ++ Y +L+ A F+ + +L ++ NGV PD + +NA+I
Sbjct: 71 EEGHKPTII-TYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSIL-------FNAMINA 122
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
+ G+V EA+ I R M E G P ++N +I GF + P +A +L +
Sbjct: 123 FSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL-----------L 171
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E ++ + ++ +E Y+ L+ + + ++E+A+ + ++ + G + VT +
Sbjct: 172 EMMIQDGNVK--PNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
++ T A+ ++L M + K T +I +G+ G ++E
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIII---------------RGYCKEGNMTE 274
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
A R M P+ V+N LI + + D T M +G P + +
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVT 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 60/234 (25%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT----------- 54
+ P+E TY+ L I A+C E + N+ +M+++G+ PD VT
Sbjct: 180 VKPNERTYNIL-------IQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQN 232
Query: 55 -------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P+ T +I GYC G + EAL L M E+G+ P+ V
Sbjct: 233 GETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPV 292
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-------------- 141
+N +I G+ I + E M+E I + + V Y ++M S
Sbjct: 293 VFNSLIKGYLDITDTDGVEEALTLMEEFGI-KPDVVTYSTIMNAWSSSGLMDNCEEIFDD 351
Query: 142 --------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
D AYS L Y+ G +KA L + G + V + I+G
Sbjct: 352 MVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------- 54
G+ PD TYS++ NA+ S G + D M+ + PD
Sbjct: 321 GIKPDVVTYSTIMNAWSS-------SGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVR 373
Query: 55 -GSP-----------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
G P ++V + +I G+C G+++ AL + M EMG + +
Sbjct: 374 AGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKT 433
Query: 97 YNIVISGFCRIREPGKAYELKMEMDE 122
Y +I G+ ++P KA EL + M+E
Sbjct: 434 YETLIWGYGEAKQPWKAEELLVTMEE 459
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 125/294 (42%), Gaps = 36/294 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+EG ++ Y +L+ A F+ + +L ++ NGV PD + +NA+I
Sbjct: 71 EEGHKPTII-TYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSIL-------FNAMINA 122
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
+ G+V EA+ I R M E G P ++N +I GF + P +A +L +
Sbjct: 123 FSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL-----------L 171
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E ++ + ++ +E Y+ L+ + + ++E+A+ + ++ + G + VT +
Sbjct: 172 EMMIQDGNVK--PNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
++ T A+ ++L M + K T +I +G+ G ++E
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIII---------------RGYCKEGNMTE 274
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
A R M P+ V+N LI + + D T M +G P + +
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVT 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 60/234 (25%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT----------- 54
+ P+E TY+ L I A+C E + N+ +M+++G+ PD VT
Sbjct: 180 VKPNERTYNIL-------IQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQN 232
Query: 55 -------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P+ T +I GYC G + EAL L M E+G+ P+ V
Sbjct: 233 GETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPV 292
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-------------- 141
+N +I G+ I + E M+E I + + V Y ++M S
Sbjct: 293 VFNSLIKGYLDITDTDGVEEALTLMEEFGI-KPDVVTYSTIMNAWSSSGLMDNCEEIFDD 351
Query: 142 --------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
D AYS L Y+ G +KA L + G + V + I+G
Sbjct: 352 MVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------- 54
G+ PD TYS++ NA+ S G + D M+ + PD
Sbjct: 321 GIKPDVVTYSTIMNAWSS-------SGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVR 373
Query: 55 -GSP-----------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
G P ++V + +I G+C G+++ AL + M EMG + +
Sbjct: 374 AGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKT 433
Query: 97 YNIVISGFCRIREPGKAYELKMEMDE 122
Y +I G+ ++P KA EL + M+E
Sbjct: 434 YETLIWGYGEAKQPWKAEELLVTMEE 459
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ YC+ S+ ++++M GV PD L+TYN LI+G GRV EA
Sbjct: 272 YNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPD-------LITYNTLIFGLSKSGRVSEAK 324
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+LR M E G PD V+Y +++G CR E A L EM E + Y +L+ G
Sbjct: 325 KLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEM-EMKGCSPNTCTYNTLLHG 383
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
L + M Y A + DG + + + F+ L R +A E
Sbjct: 384 LCKSRMFDKAMELYGA-------------MKSDGLKLDMASYATFVRALCSVGRVADAYE 430
Query: 200 ILLSMISNSCLS 211
+ + + LS
Sbjct: 431 VFDYAVESKSLS 442
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+LVTY LI C + EA ++ + E G PD YN ++ G+C + +A E+
Sbjct: 232 PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 291
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M EK + + + Y +L+ GLS G + +A L R +A G+
Sbjct: 292 YNRMKEKGV-EPDLITYNTLIFGLS-------------KSGRVSEAKKLLRVMAEKGHFP 337
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
+ VT + +NG+ +K T A +L M C T TY+ L+ C + F +E
Sbjct: 338 DEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNT--CTYNTLLHGLCKSRMFDKAME 395
Query: 236 LVKGFRMRGL 245
L + GL
Sbjct: 396 LYGAMKSDGL 405
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 122/329 (37%), Gaps = 56/329 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIH---NGVLPDFVTGSPSLVT 61
SPD+ TY L +C SK S L +IH N ++ D + SP T
Sbjct: 118 SFSPDKSTYHILL--------THCCKSTDSKYSTL--SLIHQTLNLMVSDGI--SPDKGT 165
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+ + C RV++A+ +++ + SPD SYN ++ C+ R Y EM
Sbjct: 166 VDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMR 225
Query: 122 EKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGDM 159
K ++ V Y L+ + + Y+++M Y
Sbjct: 226 TKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRG 285
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
+A + + G + +T + I GLSK R EAK++L M TY
Sbjct: 286 SEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPD--EVTYT 343
Query: 220 ALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+L+ C E + + L++ M+G P+ YN L+ C+
Sbjct: 344 SLMNGMCRKGETLAALALLEEMEMKGC----------------SPNTCTYNTLLHGLCKS 387
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ DKA +Y M G M S +
Sbjct: 388 RMFDKAMELYGAMKSDGLKLDMASYATFV 416
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 28/149 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G PDE TY+ SL+N C GE L ++M G SP+
Sbjct: 330 MAEKGHFPDEVTYT-------SLMNGMCRKGETLAALALLEEMEMKGC-------SPNTC 375
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L++G C ++A+ + M GL D SY + C + AYE+
Sbjct: 376 TYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEV---- 431
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSL 149
Y + LSD AYS+L
Sbjct: 432 ----------FDYAVESKSLSDVAAYSTL 450
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 45/227 (19%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD AY +LINA C G F+K +L QM LP F P + TY
Sbjct: 183 GCKPD-------VQAYNALINAMCSVGNFTKARHLLQQM----ELPGF-HSPPDVFTYTV 230
Query: 65 LIYGYCFLG------------RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK 112
LI YC G R+ EA + R M G+ PD V+YN +I G C+ G+
Sbjct: 231 LISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALIDGCCKTYRVGR 290
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
A EL +M +KR V Y+S ++ Y S++N +++KA RE+
Sbjct: 291 ALELFDDM-KKRGCVPNRVTYDSFIR-------YYSVVN------EIDKAVEFLREMQRS 336
Query: 173 GYLSES-------VTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
Y E+ + + I+ L + R +A L+ +I N + +
Sbjct: 337 NYDGENGIVVGSCSSYTPIIHALCEVGRVADAWSFLVELIDNGSVPR 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 8 PDEGTYSSLFNAY--FSLINAYCLGG---EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
PD TY+ L ++Y + + + C + + L M+ G++PD +V Y
Sbjct: 223 PDVFTYTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPD-------VVAY 275
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD- 121
NALI G C RV AL + M + G P+ V+Y+ I + + E KA E EM
Sbjct: 276 NALIDGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQR 335
Query: 122 -----EKRILRMEEVVYESLMQGLSD----EDAYSSLMNDYLAQGDMEKAYILD------ 166
E I+ Y ++ L + DA+S L+ + + G + + Y
Sbjct: 336 SNYDGENGIVVGSCSSYTPIIHALCEVGRVADAWSFLV-ELIDNGSVPREYTYKLVCDGL 394
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
R D LS V + L + RT + K ++
Sbjct: 395 RLKGEDELLSGEVHRRIKCGILERYKRTMKVKPVM 429
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 53 VTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK 112
V P + +N L+ C VEEA G+ + M + ++P+ +YNI++ G+CR+R P +
Sbjct: 183 VKTQPEINAFNFLLDALCKCCLVEEAEGLYKRMRK-KINPNGDTYNILVFGWCRVRNPSR 241
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
++ EM + + D Y++ ++ Y +G + A L +
Sbjct: 242 GMKVLEEMIQ--------------LGHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTK 287
Query: 173 GYLSESVTE---SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE 229
G + S T S+ I L + R E + + MIS+ CL TTY +IE
Sbjct: 288 GSIISSPTAKSYSILIVALVQNDRMEECFKFMGHMISSGCLPDV--TTYKDIIE------ 339
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
G + G + EA + + M + PD +N + C K ++A +Y
Sbjct: 340 ---------GMCLCGKIDEAYKFLEEMGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYG 390
Query: 290 RMVHYGFVPHMFSVLALI 307
RM+ +P + + LI
Sbjct: 391 RMIELSCIPSVQTYNMLI 408
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 14 SSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
S +Y LI A + MI +G LPD + TY +I G C G
Sbjct: 293 SPTAKSYSILIVALVQNDRMEECFKFMGHMISSGCLPD-------VTTYKDIIEGMCLCG 345
Query: 74 RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY 133
+++EA L M + G PD V++N + C ++ +A +L M E
Sbjct: 346 KIDEAYKFLEEMGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYGRMIE----------- 394
Query: 134 ESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
+ + Y+ L++ + D + A+ E+ G ++ T V I GL +
Sbjct: 395 ---LSCIPSVQTYNMLISMFFKMDDPDGAFETWHEMEKRGCRPDTDTYGVMIEGLFNCNK 451
Query: 194 TREAKEILLSMISNSCLSKTTHTTYDALI 222
+A ILL + N + K + +D+L+
Sbjct: 452 AEDAC-ILLEEVINKGI-KLPYRKFDSLL 478
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L++ YCL E +K N+ + + + +P + +Y +I G C + V+EA
Sbjct: 83 TYNTLMDGYCLANEVNKAKNVFNVIGKRRM-------TPYVFSYIIIINGLCKIKMVDEA 135
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + EM P+ V+YN +I G C+ A+EL +M + R + + Y S +
Sbjct: 136 LNLF---TEMHCKPNTVTYNSLIDGLCKSGRISHAWELLDQMHD-RGQPADVITYNSFLH 191
Query: 139 GLSDE----------------------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
L + YS L++ +G +E A ++ +++ GY
Sbjct: 192 ALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKV 251
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSLV 234
T ++ INGL + EA +L M N C+ T T AL +N N++ +
Sbjct: 252 TLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAE--- 308
Query: 235 ELVKGFRMRGLV 246
+L++ RGL+
Sbjct: 309 KLLREMIARGLL 320
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 30/228 (13%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
VTYN L+ GYC V +A + + + ++P SY I+I+G C+I+ +A L E
Sbjct: 82 VTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTE 141
Query: 120 MDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQG 157
M K V Y SL+ GL +D Y+S ++
Sbjct: 142 MHCKP----NTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNH 197
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
++KA L ++I G T S+ I+GL K+ R A+ I ++ K T T
Sbjct: 198 QVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKG--YKVTLWT 255
Query: 218 YDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
Y +I C F + L++ G + A + T++H K D
Sbjct: 256 YTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAV-TYATIIHALFKND 302
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 44/317 (13%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
W GL PD F+ Y L YC G+ S+V +L ++ + + F+ G V Y
Sbjct: 209 W-GLVPD-------FHVYSPLTRGYCETGKDSEVVDLFKEIKQSCL---FLDG----VAY 253
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N ++ C LG+V++A+ L + M + D Y +I+G+C + +A L EM+E
Sbjct: 254 NIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTLINGYCLQGKTVEAQCLFKEMEE 313
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
K + + V Y L GL +D S ++ D L D + G S T
Sbjct: 314 KG-FKPDVVAYNVLAAGLFRKDLDSEVI-DLLIYMDSQ------------GVKPNSTTHK 359
Query: 183 VFINGLSKKARTREAK-----------EILLSMISNSCLSKTTHTTYDALIENCSNNEFK 231
+ I G + EA+ E+ +M++ C + +YD + + + F+
Sbjct: 360 IIIEGYCSVGKVGEAEAYFNRMKNESVELYTAMVNGYCEANLIEKSYDLFLSCQTKDIFQ 419
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV-YNFLIVEHCRCKNVDKAYNMYTR 290
V +++ E AR+ G G V Y +I +CR + +AY+++
Sbjct: 420 QKVLVLRNLAWN---MERARSLFDFFIGRGFTLGVVTYTVMIKGYCRMNCLQEAYDLFQD 476
Query: 291 MVHYGFVPHMFSVLALI 307
M G P++ + L+
Sbjct: 477 MKRRGIQPNVVTYTVLL 493
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY + I +C + K ++ M G++PDF SP L GYC G+ E
Sbjct: 182 AYAAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHVYSP-------LTRGYCETGKDSEV 234
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + + + + L D V+YNIV+ C++ GK + + +EE+ + M
Sbjct: 235 VDLFKEIKQSCLFLDGVAYNIVLDSLCKL---GKV--------DDAVSTLEEL---TSMN 280
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D Y++L+N Y QG +A L +E+ G+ + V +V GL +K E
Sbjct: 281 IDLDIKHYTTLINGYCLQGKTVEAQCLFKEMEEKGFKPDVVAYNVLAAGLFRKDLDSEVI 340
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
++L+ M S K TT+ +IE G+ G V EA + M +
Sbjct: 341 DLLIYMDSQG--VKPNSTTHKIIIE---------------GYCSVGKVGEAEAYFNRMKN 383
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
+ + +Y ++ +C ++K+Y+++
Sbjct: 384 ESVE----LYTAMVNGYCEANLIEKSYDLF 409
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 133/308 (43%), Gaps = 58/308 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ SLI+ Y G+F + L +QM+ G+ PD LVT+N L+ GY GR++EA
Sbjct: 462 AWNSLISGYSFKGQFGEAVKLLNQMVEEGITPD-------LVTWNGLVSGYSMQGRIDEA 514
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI------------- 125
L I+ + G++P+ VS+ +ISG + + A ++ +M + +
Sbjct: 515 LTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCA 574
Query: 126 -------LRMEEVVYESLMQGLSDEDAY--SSLMNDYLAQGDMEKAYILDREIAHD---- 172
+ EE+ S+ G D D Y ++L++ Y G ++ AY + +I
Sbjct: 575 CAGPSLLKKGEELHCFSMKLGFVD-DIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPC 633
Query: 173 ------GYLSESVTESVFINGLSKKARTREAKE------ILLSMISNSCLSKTTHTTYDA 220
GY S E V I L K R R + LLS NS L +D+
Sbjct: 634 WNCMMMGYAIHSHGEEVMI--LYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDS 691
Query: 221 LIEN----CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
+ E+ + + +V+L+ G + EA+ +TM KPD ++ L+
Sbjct: 692 MQEDYNIVPTIEHYCCMVDLLGK---SGFLDEASHFIETM---PIKPDASIWGALLASCK 745
Query: 277 RCKNVDKA 284
KN+ A
Sbjct: 746 IHKNIKLA 753
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 135/319 (42%), Gaps = 54/319 (16%)
Query: 13 YSSLFNAYFSLINAYCLGGEFS-KVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCF 71
+S +++ S+I +Y + G + + + + M +G+ PD ++T+N+++ GY
Sbjct: 319 HSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPD-------IITWNSILSGYLL 371
Query: 72 LGRVEEALGILRGMPEMGLSPDAVSYN-----IVISGFCRIREPGKAYELK--------- 117
G E L R + +G PD+ S ++ GF ++ + Y ++
Sbjct: 372 RGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYV 431
Query: 118 ------MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
M + + + + V++ + + + A++SL++ Y +G +A L ++
Sbjct: 432 CTSLVDMYVKNDCLEKAQAVLHRAKNKNVC---AWNSLISGYSFKGQFGEAVKLLNQMVE 488
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFK 231
+G + VT + ++G S + R EA I ++ I +S ++ ++ ALI CS NE
Sbjct: 489 EGITPDLVTWNGLVSGYSMQGRIDEALTI-INRIKSSGITPNV-VSWTALISGCSQNE-- 544
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN---VDKAYNMY 288
+A + M N KP+ L+ C C + K ++
Sbjct: 545 -------------KYMDALKIFSQMQAENVKPNSTTICSLL---CACAGPSLLKKGEELH 588
Query: 289 TRMVHYGFVPHMFSVLALI 307
+ GFV ++ ALI
Sbjct: 589 CFSMKLGFVDDIYVATALI 607
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 130/359 (36%), Gaps = 74/359 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL- 59
M W+ L PD YS SLI YC + K +L++ MI G+ + V S L
Sbjct: 326 MEWQRLVPDCHVYS-------SLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILH 378
Query: 60 ---------------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
V YN + LG+++E G+L + M +
Sbjct: 379 CFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDF 438
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D Y I G+C +P KAY + EM+EK + + V Y L GL S M D
Sbjct: 439 DIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKG-FKPDVVAYNVLAAGLCGNRHVSEAM-D 496
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK-----------EIL 201
L D + G S T + I G + + EA+ EI
Sbjct: 497 LLNYMDSQ------------GVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIY 544
Query: 202 LSMISNSCLSKTTHTTYDALIENCSN-----NEFKSLVELVKGFR--------MRGLVSE 248
+M+S C + +Y+ L SN E L +L K +G +
Sbjct: 545 TAMVSGYCEADLIEKSYE-LFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQR 603
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
A D L PD Y +I +C + +A++++ M G P + + L+
Sbjct: 604 ARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLL 662
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 71/311 (22%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y I GYC G+ ++A I + M E G PD V+YN++ +G C R +A +L MD
Sbjct: 443 YTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMD 502
Query: 122 EKRILRMEEVVYESLMQGLSDE------------------DAYSSLMNDYLAQGDMEKAY 163
+ + + ++ +++G E + Y+++++ Y +EK+Y
Sbjct: 503 SQGV-KPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEKSY 561
Query: 164 ILDREIAHDGYLSESVTESVFINGLSK------------KARTREAKEILLSMISNSCLS 211
L E+++ G ++ ES + LSK K + A+ + +
Sbjct: 562 ELFHELSNRG---DTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTP 618
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL-------------VSEAARA--HDT 255
TY +I++ C+ N + +L + + RG+ S+ AR+ H +
Sbjct: 619 DV--VTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFS 676
Query: 256 MLHGNHK-------------------PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
HG K PD +Y LI H + N + A ++ ++ G
Sbjct: 677 SQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGL 736
Query: 297 VPHMFSVLALI 307
P + AL
Sbjct: 737 EPDNVTYTALF 747
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 123/317 (38%), Gaps = 53/317 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY+ + A + GG+ + S + D+M GV +P+ Y A
Sbjct: 224 GLCPNHHTYAIIIKALGTK------GGDLKQASGVFDEMKEAGV-------TPNSYCYAA 270
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
I G C + + +LR + E D +Y VI GFC + KA ++ +M+ +R
Sbjct: 271 YIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQR 330
Query: 125 ILRMEEVVYESLMQGLSDE-------DAY---------------SSLMNDYLAQGDMEKA 162
++ + VY SL+ G D Y S +++ + G+ +
Sbjct: 331 LVP-DCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRV 389
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+E+ G + V ++ + L K + E +L + K+ H +D
Sbjct: 390 VDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDL-------KSMHIDFD--- 439
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
K +KG+ ++G +A M KPD YN L C ++V
Sbjct: 440 -------IKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVS 492
Query: 283 KAYNMYTRMVHYGFVPH 299
+A ++ M G P+
Sbjct: 493 EAMDLLNYMDSQGVKPN 509
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G++PD +Y+ + IN +C + + NL +M ++P+ +V
Sbjct: 1 MAQGGVNPDTQSYNIM-------INGFCKIKKVDEAMNLFKKMHCKNIIPN-------VV 46
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI G C G++ AL ++ M + G+ PD ++Y+ ++ C+ + KA L
Sbjct: 47 TYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL---- 102
Query: 121 DEKRILRMEEVVYESL-MQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ ++++ V+E L ++G + D AY+ ++ + +G +A L ++ +G + ++
Sbjct: 103 ----LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDA 158
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCL 210
T + I L KK A+++L MI+ L
Sbjct: 159 KTYEIIILSLFKKDENDMAEKLLREMIARGLL 190
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 85 MPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED 144
M + G++PD SYNI+I+GFC+I++ +A L +M K I+ V Y SL+ GL
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP-NVVTYTSLIDGLC--- 56
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
G + A L E+ G + +T S ++ L K + +A +
Sbjct: 57 ----------KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL---- 102
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
L+K ++ L N + + +++GF ++GL +EA M PD
Sbjct: 103 -----LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPD 157
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
Y +I+ + D A + M+ G +
Sbjct: 158 AKTYEIIILSLFKKDENDMAEKLLREMIARGLL 190
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+++AYC GE +K S + ++M G+ P+ +VT+N+LI GYC G + AL +
Sbjct: 226 VVSAYCKLGELNKASEVLEKMKDMGLCPN-------VVTFNSLISGYCDKGLLGLALKVR 278
Query: 83 R-GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M + G+ P+ V++N +I+GFC+ GK +E E ++ + V
Sbjct: 279 DLMMGKNGVFPNVVTFNTLINGFCK---EGKLHEANRVFSEMKLANVAPNVV-------- 327
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y++L+N + G+ E L E+ + ++ +T + I GL K+ +T++A ++
Sbjct: 328 ---TYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMV 384
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
+ + L+ N S + L+ G +R A + +M+
Sbjct: 385 KELDKGN------------LVPNAS-----TFSALIAGQCVRNNSERAFLVYRSMVRSGF 427
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
P+ + L C+ ++ D A + M+ P
Sbjct: 428 SPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTP 464
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 35/270 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++ + NA + +L R E + R M +SP+ + N+V+S +C++ E KA E+
Sbjct: 183 PTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEV 242
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYL 175
+M + M + ++SL++ Y +G + A + D + +G
Sbjct: 243 LEKMKD--------------MGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVF 288
Query: 176 SESVTESVFINGLSKKARTREAKEILLSM-ISNSCLSKTTHTTY-------------DAL 221
VT + ING K+ + EA + M ++N + T+ T L
Sbjct: 289 PNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGL 348
Query: 222 IENCSNNEFKSLV----ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
E N+ K+ + L+ G G +AA + GN P+ ++ LI C
Sbjct: 349 FEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCV 408
Query: 278 CKNVDKAYNMYTRMVHYGFVP--HMFSVLA 305
N ++A+ +Y MV GF P + F +LA
Sbjct: 409 RNNSERAFLVYRSMVRSGFSPNENTFRMLA 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +LIN +C G+ + + + +M +P++VTYN LI G+ G E
Sbjct: 293 TFNTLINGFCKEGKLHEANRVFSEM-------KLANVAPNVVTYNTLINGFGQAGNSEMG 345
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+G+ M + D ++YN +I G C+ + KA + E+D+ +
Sbjct: 346 IGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNL------------- 392
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ + +S+L+ + + E+A+++ R + G+ T + + K A
Sbjct: 393 -VPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAV 451
Query: 199 EILLSMI 205
++L M+
Sbjct: 452 QVLRDML 458
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 34/237 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP-DAVSYNIVISGFCRIREPGKAYE 115
P+ TYN LI G C G V+ A +L M +G P D +S N+V++GFC+
Sbjct: 56 PNFYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKT-------- 107
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
R+ V+ G S + ++Y+SL+N + +A + ++ +G
Sbjct: 108 -------GRLKEALSFVWLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGI 160
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+ + V ++ I GLS++ R EA ++L M T+DA C N + L
Sbjct: 161 VPDVVLYAIMIRGLSEEGRVGEAGKMLEEM-------NQIGLTHDAY---CYNVVIQGLC 210
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
++ G+V EA + M + +N LI C+ KN+++A N++ +M
Sbjct: 211 DV-------GMVVEAKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAMNLFYKM 260
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 56/315 (17%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F Y LI+ C GE L D+M G P +++ N ++ G+C GR++
Sbjct: 58 FYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPP------SDMISCNVVLNGFCKTGRLK 111
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
EAL + + + G S + SY +I+GF + R +A +M E+ I+ + V+Y +
Sbjct: 112 EALSFVWLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVP-DVVLYAIM 170
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
++GLS+E G + +A + E+ G ++ +V I GL E
Sbjct: 171 IRGLSEE-------------GRVGEAGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVE 217
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIE--------------------------------- 223
AKE+ M C + + T++ALI
Sbjct: 218 AKELFNRMEKLGC--ELSIVTFNALINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQG 275
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+C ++ SL + VK G + +A + T G+ + D YN LI C + +
Sbjct: 276 SCQVSDGASLQKKVKEMCEAGQILKAYKLI-TDHAGDLRLDIISYNILINAFCLDREFNA 334
Query: 284 AYNMYTRMVHYGFVP 298
AYN++ + G P
Sbjct: 335 AYNLFEELQKKGLSP 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 31/252 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
N+Y SLIN + + + + +M G++PD +V Y +I G GRV E
Sbjct: 130 NSYTSLINGFFKARRYREARVWYTKMFEEGIVPD-------VVLYAIMIRGLSEEGRVGE 182
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A +L M ++GL+ DA YN+VI G C + +A EL M EK + V + +L+
Sbjct: 183 AGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVEAKELFNRM-EKLGCELSIVTFNALI 241
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH------DGY-LSESVTESVFINGLSK 190
GL MN + D+ + Y ++ DG L + V E + K
Sbjct: 242 NGLCKAKNLEEAMNLFYKM-DVGRKYSFRFSLSQGSCQVSDGASLQKKVKEMCEAGQILK 300
Query: 191 --KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVS 247
K T A ++ L +IS Y+ LI C + EF + L + + +GL
Sbjct: 301 AYKLITDHAGDLRLDIIS-----------YNILINAFCLDREFNAAYNLFEELQKKGLSP 349
Query: 248 EAARAHDTMLHG 259
++ + T++ G
Sbjct: 350 DSV-TYGTIIKG 360
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 43/299 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI+ C G K L +M V PD +VT NAL+ G C +GRV+ A
Sbjct: 239 TYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPD-------VVTLNALVNGMCKIGRVDSA 291
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M GL +AV+Y +ISGFC + KA + EM + +VY SL+
Sbjct: 292 VEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGC-SPDTIVYYSLIS 350
Query: 139 GLS-----------------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
L+ D Y +L++ + + +E+ + ++ ++VT
Sbjct: 351 SLTIARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTY 410
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+ ++ L K + A +++ MI + + Y A+I +
Sbjct: 411 NTLVSYLGKAGDSATATKMMKEMIEEGF--EPSVFAYGAIIH---------------AYC 453
Query: 242 MRGLVSEAARAHDTMLHGNH-KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
++ V EA + + M + +P+ +Y LI C+ NV+KA ++ M P+
Sbjct: 454 LKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSVRPN 512
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 38/252 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VTYN LI C G V++ + M E + PD V+ N +++G C+I A E
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEF 294
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
EM K GL + Y++L++ + ++ KA E+ G
Sbjct: 295 FNEMKGK---------------GLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCS 339
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ I+ L+ A+ + LS + L T Y AL+
Sbjct: 340 PDTIVYYSLISSLTI------ARRMDLSQLKQVGLG-LDRTCYYALLS------------ 380
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
GFR + + + + + M KPD YN L+ + + A M M+ G
Sbjct: 381 ---GFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEG 437
Query: 296 FVPHMFSVLALI 307
F P +F+ A+I
Sbjct: 438 FEPSVFAYGAII 449
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+EG S+F AY ++I+AYCL + + ++M ++ P++V Y LI
Sbjct: 435 EEGFEPSVF-AYGAIIHAYCLKKNVGEAMKIFEEMCSTSMV------RPNIVIYTILIDA 487
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
C VE+A+ ++ M + P+ YN+++ G R KA+EL M E
Sbjct: 488 LCKTNNVEKAVSLMGDMKLKSVRPNTTIYNVILKGLWDKRMLHKAFELMDRMVE 541
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 140/299 (46%), Gaps = 38/299 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+E + + Y ++++ Y + G K + +++ G SPS+V+Y LI
Sbjct: 435 EEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGF-------SPSIVSYGCLINL 487
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
Y +G+V +AL I R M +G+ + +Y+++ +GF ++++ A+ +
Sbjct: 488 YTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSV-----------F 536
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E++ + L D Y++++ + G+M++A + +++ + + + + T I+G
Sbjct: 537 EDITKDGLK---PDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGF 593
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
++ TR A EI +M + C+ T H TY+ALI + LV+ +M +
Sbjct: 594 ARAGETRRALEIFDTMRRSGCIP-TVH-TYNALI-----------LGLVEKCQME----K 636
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
A + D M P+ Y L+ + + +KA+ +T + + G +++ AL+
Sbjct: 637 ALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALL 695
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 52/324 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ + TYS LFN + L +++ ++ + + +G+ PD ++ YN
Sbjct: 508 GIKHNMKTYSMLFNGFVKL-------KDWANAFSVFEDITKDGLKPD-------VILYNN 553
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ +C +G ++ A+ I++ M ++ +I GF R E +A E+ M
Sbjct: 554 IVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSG 613
Query: 125 IL-----------------RME---EVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAY 163
+ +ME +++ E + G+S +E Y++LM Y + GD EKA+
Sbjct: 614 CIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAF 673
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+ +DG + T + K R + A + M S T Y+ LI+
Sbjct: 674 QYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTF--VYNILID 731
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
G+ RG V EAA M +PD Y I C+ ++
Sbjct: 732 ---------------GWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQN 776
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A + M G P++ + LI
Sbjct: 777 ATQVIKEMEARGIKPNLKTYTTLI 800
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 47/292 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ P YSSL I+AY +G + + N +M G+ S+V
Sbjct: 329 MRARGIEPSSHVYSSL-------IHAYAVGRDMEEALNCVRKMKDEGI-------EMSIV 374
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ ++ G+ LG + A + E S +AV Y +I C+ + G+A L EM
Sbjct: 375 TYSIIVGGFAKLGNADAADNWFKEAKESLPSLNAVIYGSIIYAHCQACKMGRAEALVREM 434
Query: 121 DEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+E QG+ D Y ++M+ Y G+ EK I+ + G+ V
Sbjct: 435 EE---------------QGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIV 479
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ IN +K + +A EI S + + K TY L N F L +
Sbjct: 480 SYGCLINLYTKIGKVSKALEI--SRVMKTVGIKHNMKTYSMLF-----NGFVKLKDWANA 532
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
F + + + KPD +YN ++ C N+D+A + +M
Sbjct: 533 FSV----------FEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQM 574
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +I+ + GE + + D M +G +P ++ TYNALI G ++E+A
Sbjct: 585 TFLPIIHGFARAGETRRALEIFDTMRRSGCIP-------TVHTYNALILGLVEKCQMEKA 637
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L IL M G+SP+ +Y ++ G+ + + KA++ + + L ++ YE+L++
Sbjct: 638 LQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQY-FTILKNDGLEIDVYTYEALLK 696
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
G M+ A + +E++ + ++ I+G +++ EA
Sbjct: 697 AC-------------CKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAA 743
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+++ M + HT + C + ++ +++K RG + + + T++H
Sbjct: 744 DLMQQM-RKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARG-IKPNLKTYTTLIH 801
Query: 259 G--------------------NHKPDGGVYNFLIV 273
G KPD VY+ L+
Sbjct: 802 GWARAAFPEKALKCFEDLKVAGLKPDRAVYHCLMT 836
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 33/262 (12%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y LIYG+C +GR + AL L M G+ P+ V+YN++++G CR KA L E
Sbjct: 203 YTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICR-----KA-SLHPEER 256
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDR--EIAHDGYLSESV 179
+R +R E V++ + + + D S + ++ + +LD+ + G V
Sbjct: 257 FERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVV 316
Query: 180 TESVFINGLSKKARTREAKEILLSMISN---------SCLSKTTHTTYDALIENCSNNEF 230
T + I L R EA++++ M+ N +C K DA + + F
Sbjct: 317 TYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDA---DKALKFF 373
Query: 231 KSLVE-------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
K + E L+ F ++ + M+ PD Y LI C
Sbjct: 374 KKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCE 433
Query: 278 CKNVDKAYNMYTRMVHYGFVPH 299
K +A + M+ GF+P
Sbjct: 434 SKKWREACQYFVEMIEKGFLPQ 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 27/176 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VTY ++I C GR+EEA ++ M G+SP A +YN + ++ KA +
Sbjct: 313 PNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKF 372
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDED---AYSSLMNDYLAQG---DMEKAYILDREIA 170
+M E + Y L+ D + ND + G D+
Sbjct: 373 FKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDL----------- 421
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIEN 224
D Y +V I+GL + + REA + + MI L + T T Y LI++
Sbjct: 422 -DSY-------TVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQS 469
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+SP TY+ F Y +A K +M +G+ P+
Sbjct: 341 MVRNGVSPCAATYNCFFKEYRGRKDA-------DKALKFFKKMKEDGLC------EPTTH 387
Query: 61 TYNALIYGYC---FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
TY LI + +G V+E I M E G+ PD SY ++I G C ++ +A +
Sbjct: 388 TYGVLIAMFLKADMIGVVKE---IWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYF 444
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDED 144
+EM EK L ++V +E+L +GL D
Sbjct: 445 VEMIEKGFLP-QKVTFETLYRGLIQSD 470
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 33/262 (12%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y LIYG+C +GR + AL L M G+ P+ V+YN++++G CR KA L E
Sbjct: 203 YTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICR-----KA-SLHPEER 256
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDR--EIAHDGYLSESV 179
+R +R E V++ + + + D S + ++ + +LD+ + G V
Sbjct: 257 FERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVV 316
Query: 180 TESVFINGLSKKARTREAKEILLSMISN---------SCLSKTTHTTYDALIENCSNNEF 230
T + I L R EA++++ M+ N +C K DA + + F
Sbjct: 317 TYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDA---DKALKFF 373
Query: 231 KSLVE-------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
K + E L+ F ++ + M+ PD Y LI C
Sbjct: 374 KKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCE 433
Query: 278 CKNVDKAYNMYTRMVHYGFVPH 299
K +A + M+ GF+P
Sbjct: 434 SKKWREACQYFVEMIEKGFLPQ 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 27/176 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VTY ++I C GR+EEA ++ M G+SP A +YN + ++ KA +
Sbjct: 313 PNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKF 372
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDED---AYSSLMNDYLAQG---DMEKAYILDREIA 170
+M E + Y L+ D + ND + G D+
Sbjct: 373 FKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDL----------- 421
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIEN 224
D Y +V I+GL + + REA + + MI L + T T Y LI++
Sbjct: 422 -DSY-------TVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQS 469
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+SP TY+ F Y +A K +M +G+ P+
Sbjct: 341 MVRNGVSPCAATYNCFFKEYRGRKDA-------DKALKFFKKMKEDGLC------EPTTH 387
Query: 61 TYNALIYGYC---FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
TY LI + +G V+E I M E G+ PD SY ++I G C ++ +A +
Sbjct: 388 TYGVLIAMFLKADMIGVVKE---IWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYF 444
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDED 144
+EM EK L ++V +E+L +GL D
Sbjct: 445 VEMIEKGFLP-QKVTFETLYRGLIQSD 470
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TY+SL ++ YC G E K + D+M + SP ++TY +
Sbjct: 226 GVEPDVVTYNSL-------VDVYCKGREIEKAYKVFDEMREKDL-------SPDVITYTS 271
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I G +G+ ++A +L+ M E G+ PD +YN I +C + G A+EL EM K
Sbjct: 272 VIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKG 331
Query: 125 I-------------------LRMEEVVYESLM-QG-LSDEDAYSSLMNDYLAQGDMEKAY 163
+ L+ +Y+ +M +G L + L+ + ME A
Sbjct: 332 LSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMAL 391
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
L E+ G+ S ++ V + L + EA++ L MI
Sbjct: 392 QLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMI 433
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
++ + PD G N + +L+ C + N++ + HN P+L T+
Sbjct: 156 FKKIVPDYGV-----NCFNALLRTLCQEKSMTDARNVYHSLKHNF--------RPNLQTF 202
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N L+ G+ VE+A + M EMG+ PD V+YN ++ +C+ RE KAY++ EM E
Sbjct: 203 NILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMRE 259
Query: 123 KRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDME 160
K L + + Y S++ GL D AY++ + +Y +
Sbjct: 260 KD-LSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLG 318
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
A+ L E+ + G + T ++F + + + M+ CL T
Sbjct: 319 IAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYT 371
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 123/320 (38%), Gaps = 61/320 (19%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS----------- 56
P +G S+F AY ++INAY G+F L + M V P +T +
Sbjct: 165 PSQGVARSVF-AYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTYNTVINACARGGL 223
Query: 57 ------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYN 98
P ++TYN L+ G +EA + R M E G+ PD +Y+
Sbjct: 224 DWEGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYS 283
Query: 99 IVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGD 158
++ F ++ + K EL EM+ L D +Y+ L+ Y G
Sbjct: 284 YLVHTFGKLNKLEKVSELLREMESG--------------GSLPDVSSYNVLLEAYADMGF 329
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++++ + R++ G + S T S+ +N K R + +++ L M K ++T
Sbjct: 330 IKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEM-------KVSNTDP 382
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
DA N L++ F G E M+ N +P+ Y LI +
Sbjct: 383 DAGTYNI----------LIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKG 432
Query: 279 KNVDKAYNMYTRMVHYGFVP 298
+ A + M G VP
Sbjct: 433 GLFEDAKKILLHMNEKGIVP 452
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 132/339 (38%), Gaps = 61/339 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TYS L + + L + KVS L +M G LPD + +YN
Sbjct: 274 GVVPDINTYSYLVHTFGKL-------NKLEKVSELLREMESGGSLPD-------VSSYNV 319
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK- 123
L+ Y +G ++E++G+ R M E G P++ +Y+I+++ + + +L +EM
Sbjct: 320 LLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMKVSN 379
Query: 124 --------RIL--------RMEEVVYESLMQGLSDE------DAYSSLMNDYLAQGDMEK 161
IL +EVV +L + DE + Y L+ G E
Sbjct: 380 TDPDAGTYNILIQVFGEGGYFKEVV--TLFHDMVDENIEPNMETYEGLIFACGKGGLFED 437
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A + + G + S + I + A EA +M N S T TY++L
Sbjct: 438 AKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTM--NEVGSTPTVETYNSL 495
Query: 222 IENCSNNEFKSLVE--------------------LVKGFRMRGLVSEAARAHDTMLHGNH 261
+ + S VE +++ R G EA +AH M N
Sbjct: 496 VCSFSRGGLYKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANC 555
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
P+ + ++ +C VD++ + + G +P +
Sbjct: 556 DPNESTFEAVLSIYCSAGLVDESEEQFQEIKASGILPSV 594
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY +L G + +++ M+ G+ P+ TYN L++G +++ A
Sbjct: 206 AYDALFKVILRRGRYMMAKRVYNAMLREGI-------EPTRHTYNILLWGMFLSLKLDTA 258
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G+ PD V+YN +I GF R ++ +A L +EM K + M V+
Sbjct: 259 VRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNL--MPNVI------ 310
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+Y++++ ++ G +++A+ + E+ G +VT + + GL + EA
Sbjct: 311 ------SYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAG 364
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL-VKGFRMRGLVSEAARAHDTML 257
+L M+ K N+ F L+E KG G + A + M+
Sbjct: 365 NVLGEMVERYIAPK-------------DNSVFMKLMECQCKG----GNLDAAVDVLNAMI 407
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+ + G Y LI C+ D+A + +++ V
Sbjct: 408 RLSIPTEAGHYGVLIENFCKANVYDRAEKLLDKLIEKDIV 447
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ PD TY++L + +F + + +L +M ++P+ ++
Sbjct: 265 MKSRGIEPDVVTYNTLIHGFFRF-------KKVDEAESLFVEMKGKNLMPN-------VI 310
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y ++ G+ +G+V+ A + M + G+ P+AV++ ++ G C + +A + EM
Sbjct: 311 SYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEM 370
Query: 121 DEKRILRMEEVVYESLMQ 138
E+ I + V+ LM+
Sbjct: 371 VERYIAPKDNSVFMKLME 388
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 37/296 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P+ T+++L + C + + N+ +M+ + P + +
Sbjct: 339 GIKPNAVTFTTL-------LPGLCDADKMVEAGNVLGEMVERYIAPKDNS------VFMK 385
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ C G ++ A+ +L M + + +A Y ++I FC+ +A +L ++ EK
Sbjct: 386 LMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRAEKLLDKLIEKD 445
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I+ E YE + AY+ ++ G KA + R++ G L + V +
Sbjct: 446 IVLRPETSYE------MEASAYNRMIGYLCDNGKTAKAEMFFRQLMKKGVL-DPVAFNNL 498
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+ G SK+ A EI M S +Y LIE+ + +G
Sbjct: 499 MCGHSKEGNPDSAFEIATIMSRRKVHS--DEYSYRLLIES---------------YLRKG 541
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
++A A D ML G H+P+ +Y ++ V A + MV G +M
Sbjct: 542 EPADAKTALDHMLEGGHEPNSSLYRSVMESLFEDGRVQTASRVMKNMVEKGVKNNM 597
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 45/304 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+GL DE T +++ I+A G + D + NG P TYN
Sbjct: 302 KGLEFDEFTCTTV-------ISACGREGILDEARRFFDDLKLNGY-------KPGTATYN 347
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+++ + G EAL IL+ M + PDA++YN +++ + R + + M K
Sbjct: 348 SMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASK 407
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
+ + + Y++++N Y GD +KA + ++ G + T +
Sbjct: 408 GV--------------MPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNN 453
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
+ L K++R+ + +IL M N C T++ ++ C KG +
Sbjct: 454 VLVLLGKRSRSEDMIKILCDMKLNGC--PPDRITWNTMLAVCGE----------KG--KQ 499
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
VS+ R M + +PD +N LI + RC + MY MV GF P + +
Sbjct: 500 KFVSQVLRE---MKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTY 556
Query: 304 LALI 307
AL+
Sbjct: 557 NALL 560
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME-MDE 122
+++ Y G+ + A+ I M E GL P V+YN+++ + ++ G+A+ + +E +DE
Sbjct: 242 TVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKM---GRAWSMILELLDE 298
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
R +E DE +++++ +G +++A ++ +GY + T +
Sbjct: 299 MRSKGLE-----------FDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYN 347
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
+ K EA IL M N+C DA+ N ELV +
Sbjct: 348 SMLQVFGKAGVYTEALNILKEMEDNNCEP-------DAITYN----------ELVAAYVR 390
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G E A DTM P+ Y +I + + + DKA ++ +M G VP++
Sbjct: 391 AGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNV 448
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P+LVTYN+LI Y +G +A +L+ + G+SPD VSYN VI GFC+ +A
Sbjct: 690 QPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIR 749
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ EM + +++ M+ Y G +A + R + G +
Sbjct: 750 ILSEMTANGVQPC--------------PITFNTFMSCYAGNGLFAEADEVIRYMIEHGCM 795
Query: 176 SESVTESVFINGLSKKARTREAKEIL 201
+T + I+G K + +EA + +
Sbjct: 796 PNELTYKIVIDGYIKAKKHKEAMDFV 821
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+SPD +Y+++ I +C G + + +M NGV P +T+N
Sbjct: 723 GISPDVVSYNTV-------IKGFCKKGLVQEAIRILSEMTANGV-------QPCPITFNT 768
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY-------ELK 117
+ Y G EA ++R M E G P+ ++Y IVI G+ + ++ +A E+
Sbjct: 769 FMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEID 828
Query: 118 MEMDEKRILRMEEVVYESL 136
+ D++ + ++ + ESL
Sbjct: 829 ISFDDQSLKKLASCIRESL 847
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY+SL I+ Y G+ K + + ++G+ SP +V+YN
Sbjct: 688 GLQPNLVTYNSL-------IDLYARVGDCWKAEEMLKDIQNSGI-------SPDVVSYNT 733
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF 104
+I G+C G V+EA+ IL M G+ P +++N +S +
Sbjct: 734 VIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCY 773
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M ++PD T++ L ++ +C G + N+ MI + + P +V
Sbjct: 60 MTAENINPDVYTFNIL-------VDGFCKDGRVKEAKNVLAMMIKDDI-------KPRVV 105
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++L+ GYC + V +A I M G+ + SY +I+GFC+I+ +A L EM
Sbjct: 106 TYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEM 165
Query: 121 DEKRILRMEEVVYESLMQGL 140
++I+R ++Y L+ GL
Sbjct: 166 RCRKIIR-NVLIYSFLIDGL 184
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 46/269 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I++ C + +L+ +M+ + D + TYNALI G+ + ++ +A+
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLD-------VFTYNALISGFSAVSKLNDAI 54
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEK-RILRMEEVVYES 135
G+ M ++PD ++NI++ GFC R++E + ++ D K R++
Sbjct: 55 GLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVV--------- 105
Query: 136 LMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
YSSLM+ Y ++ KA + +A G ++ + + ING K
Sbjct: 106 ---------TYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVD 156
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
EA + M + ++ L+ G G +S A + D
Sbjct: 157 EAINLFEEMRCRKIIRNVLIYSF-----------------LIDGLCKSGRISYALKLVDE 199
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
M P+ +Y+ ++ C+ VD+A
Sbjct: 200 MHDRGQPPNIVIYSSILDALCKNHRVDQA 228
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
Y +I C+ + A++L EM KRI ++ Y +L+ G S A S L ND +
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRI-GLDVFTYNALISGFS---AVSKL-NDAIGL 56
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
+ A I D Y T ++ ++G K R +EAK +L MI + K
Sbjct: 57 FNKMTA----ENINPDVY-----TFNILVDGFCKDGRVKEAKNVLAMMIKDDI--KPRVV 105
Query: 217 TYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
TY +L++ C NE E+ RG+++ +++ TM++G
Sbjct: 106 TYSSLMDGYCLINEVNKAKEIFDSMAARGVMANV-QSYTTMING---------------F 149
Query: 276 CRCKNVDKAYNMYTRM 291
C+ K VD+A N++ M
Sbjct: 150 CKIKMVDEAINLFEEM 165
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 48/276 (17%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
++ +L Q+ NG++PD +VT + LI YC LG++ A I + +MG
Sbjct: 145 NNHYTTAISLFHQLEFNGIIPD-------IVTLSILINCYCHLGQMNFAFSIFGNILKMG 197
Query: 90 LSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAY 146
P+ V+ N ++ G C +++E ++ + + + +V Y +L+ GL
Sbjct: 198 FQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALG----FPLNQVTYGTLINGLCK---- 249
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYL--SESVTESVFINGLSKKARTREAKEILLSM 204
G +A + R+I DG L ++ V S I+ L K+ EA E+
Sbjct: 250 ---------MGKTTEALQVLRKI--DGKLVNTDVVMYSTIIDSLCKEIFVTEAYEL---- 294
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
Y +I + +L L+ GF + G + +A ML N P+
Sbjct: 295 -------------YSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPN 341
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+N L+ C+ NV A N+ M+ F H+
Sbjct: 342 VYTFNILVDALCKEGNVKGAMNLLAVMMKEAFRLHV 377
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 3 WRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
+ G+ PD T S L IN YC G+ + ++ ++ G P+ VT
Sbjct: 160 FNGIIPDIVTLSIL-------INCYCHLGQMNFAFSIFGNILKMGF-------QPNTVTL 205
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N L+ G C G+V+EAL + +G + V+Y +I+G C++ + +A ++ ++D
Sbjct: 206 NTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLINGLCKMGKTTEALQVLRKIDG 265
Query: 123 KRILRMEEVVYESLMQGLSDE----DAY------------------SSLMNDYLAQGDME 160
K ++ + V+Y +++ L E +AY SSL+ + G ++
Sbjct: 266 K-LVNTDVVMYSTIIDSLCKEIFVTEAYELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLK 324
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
KA+ L E+ T ++ ++ L K+ + A +L M+
Sbjct: 325 KAFCLFHEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNLLAVMM 369
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+ TYN L++GYC L ++EA+ + M + PD +YN ++ G C + +A L
Sbjct: 8 PNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRL 67
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ EM+ R++ + V Y +L+ G + ++ A+ L E+ G
Sbjct: 68 RDEMESLRLVP-DGVTYNTLIDGCFEHQGSAA-------------AFKLVEEMKSRGVKE 113
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+VT ++ + K+ EA + M + L +Y+ +I
Sbjct: 114 NAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMIN------------- 160
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
G+ G +++A + D M K D N ++ C K +D AYN
Sbjct: 161 --GYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDAYN 208
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY+ L ++ YC + + + M N +LPD + TYN
Sbjct: 5 GLVPNRNTYNIL-------VHGYCKLKWLKEAVEVTELMTGNDMLPD-------VWTYNT 50
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ G C G+++EA+ + M + L PD V+YN +I G + A++L EM +
Sbjct: 51 MVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRG 110
Query: 125 ILRMEEVVYESLM------QGLSDED-------------------AYSSLMNDYLAQGDM 159
+ E V ++M +G DE +Y+ ++N Y G M
Sbjct: 111 V--KENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKM 168
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
KA+ + E+ G +++ T + + L + + +A
Sbjct: 169 AKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDA 206
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G KV + ++M G P+ +Y+ LI +C GR+E+ + M + +
Sbjct: 258 GLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEI 310
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA----Y 146
D VSYN +I GFC+I + G+A E EM GL DA Y
Sbjct: 311 EADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVSTY 352
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 353 EHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVG 412
Query: 207 NSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+D + + KS L+KGF G + EA + ML + +
Sbjct: 413 K----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSE 456
Query: 267 VYNFLIVEHCR 277
+Y I + R
Sbjct: 457 IYEVFIDGYVR 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEEMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCYKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
+G M++A L E+ G+ S VFI+G ++ A+ + M+
Sbjct: 433 EGRMDEALKLQAEMLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQTQ 485
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G KV + ++M G P+ +Y+ LI +C GR+E+ + M + +
Sbjct: 258 GLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEI 310
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA----Y 146
D VSYN +I GFC+I + G+A E EM GL DA Y
Sbjct: 311 EADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVSTY 352
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 353 EHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVG 412
Query: 207 NSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+D + + KS L+KGF G + EA + ML + +
Sbjct: 413 K----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSE 456
Query: 267 VYNFLIVEHCR 277
+Y I + R
Sbjct: 457 IYEVFIDGYVR 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEEMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCYKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
+G M++A L E+ G+ S VFI+G ++ A+ + M+
Sbjct: 433 EGRMDEALKLQAEMLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQTQ 485
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G KV + ++M G P+ +Y+ LI +C GR+E+ + M + +
Sbjct: 258 GLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEI 310
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA----Y 146
D VSYN +I GFC+I + G+A E EM GL DA Y
Sbjct: 311 EADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVSTY 352
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 353 EHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVG 412
Query: 207 NSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+D + + KS L+KGF G + EA + ML + +
Sbjct: 413 K----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSE 456
Query: 267 VYNFLIVEHCR 277
+Y I + R
Sbjct: 457 IYEVFIDGYVR 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEEMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCYKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
+G M++A L E+ G+ S VFI+G ++ A+ + M+
Sbjct: 433 EGRMDEALKLQAEMLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQTQ 485
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G KV + ++M G P+ +Y+ LI +C GR+E+ + M + +
Sbjct: 258 GLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEI 310
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA----Y 146
D VSYN +I GFC+I + G+A E EM GL DA Y
Sbjct: 311 EADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVSTY 352
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 353 EHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVG 412
Query: 207 NSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+D + + KS L+KGF G + EA + ML + +
Sbjct: 413 K----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNSE 456
Query: 267 VYNFLIVEHCR 277
+Y I + R
Sbjct: 457 IYEVFIDGYVR 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEEMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCYKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS 208
+G M++A L E+ G+ S VFI+G ++ A+ + M+
Sbjct: 433 EGRMDEALKLQAEMLGKGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEMLQTQ 485
>Medtr4g068800.1 | PPR containing plant-like protein | HC |
chr4:25806656-25804340 | 20130731
Length = 611
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 45/247 (18%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
G KV + ++M G P+ +Y+ LI +C GR+E+ + M +
Sbjct: 257 SGLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKE 309
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA---- 145
+ D VSYN +I GFC+I + G+A E EM GL DA
Sbjct: 310 IEADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVST 351
Query: 146 YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
Y L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 352 YEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGV 411
Query: 206 SNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
+D + + KS L+KGF G + EA + ML + +
Sbjct: 412 GK----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMLGKGFQLNS 455
Query: 266 GVYNFLI 272
+Y I
Sbjct: 456 EIYEVFI 462
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEEMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCYKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFING 187
+G M++A L E+ G+ S VFI+G
Sbjct: 433 EGRMDEALKLQAEMLGKGFQLNSEIYEVFIDG 464
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+E + S Y L+N+ C G + +L+ +M+ PD +VTYN L+
Sbjct: 347 NETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPD-------IVTYNTLLNA 399
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
C G ++E++ +L + SP V+YNIVI+G R+R A E+ EM EK I
Sbjct: 400 LCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGI-DP 458
Query: 129 EEVVYESLMQGLSD----ED------------------AYSSLMNDYLAQGDMEKA---- 162
+ + + +L+ GL E+ AY ++ Q ++ A
Sbjct: 459 DYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQAL 518
Query: 163 -YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
++ + DG + ++ +SV G+ +A + I L ++ + CL HT
Sbjct: 519 DLMVKAQCKPDGKIYYTLLKSVANEGMVNEANDLHQRLIELKILKDGCLIVGAHT 573
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 125/324 (38%), Gaps = 52/324 (16%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F + +LI G+ K + + M+ +G G P +T+NA+I C G ++
Sbjct: 145 FPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG-------GVPDTITFNAVIGSLCKRGHLK 197
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA------------------YELKM 118
AL L GM G PDA +YN +I +P A Y L +
Sbjct: 198 SALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLV 257
Query: 119 EMDEKRI--LRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
E+ K R EV+ + +G D + Y+SL+N QG+ + ++ + G
Sbjct: 258 ELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQ 317
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI------------- 222
VT ++ I+ LS + +IL I N T TY+ L+
Sbjct: 318 PNVVTYNILIHSLSLHGYSDVVDDIL--KIMNETSISPTLVTYNILLNSLCKSGFLDRSI 375
Query: 223 --------ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
ENCS + + L+ G + E+ + ++ N P YN +I
Sbjct: 376 SLYIKMVSENCS-PDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVP 298
R +++ A MY MV G P
Sbjct: 435 LARMRSIKSAKEMYGEMVEKGIDP 458
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 111/300 (37%), Gaps = 43/300 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ + C G+ + + L + M +P F PS LI G +G+V++ I+
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHF----PSCTN---LIRGLIRIGQVDKGCKIM 168
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M G PD +++N VI C+ A E M SL L D
Sbjct: 169 NMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGM--------------SLSGCLPD 214
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++++ +GD A ++ G+ +T ++ + + K A E+L
Sbjct: 215 AKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLE 274
Query: 203 SMISNSCLSKTTHTTYDALIENCSNN-EFKSLVELVKGFRMRGL----VSEAARAHDTML 257
M C Y++L+ S +K ++ G+ V+ H L
Sbjct: 275 DMAREGCCPDI--NMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSL 332
Query: 258 HG---------------NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
HG + P YN L+ C+ +D++ ++Y +MV P + +
Sbjct: 333 HGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVT 392
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+E + S Y L+N+ C G + +L+ +M+ PD +VTYN L+
Sbjct: 347 NETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPD-------IVTYNTLLNA 399
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
C G ++E++ +L + SP V+YNIVI+G R+R A E+ EM EK I
Sbjct: 400 LCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGI-DP 458
Query: 129 EEVVYESLMQGLSD----ED------------------AYSSLMNDYLAQGDMEKA---- 162
+ + + +L+ GL E+ AY ++ Q ++ A
Sbjct: 459 DYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQAL 518
Query: 163 -YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
++ + DG + ++ +SV G+ +A + I L ++ + CL HT
Sbjct: 519 DLMVKAQCKPDGKIYYTLLKSVANEGMVNEANDLHQRLIELKILKDGCLIVGAHT 573
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 125/324 (38%), Gaps = 52/324 (16%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
F + +LI G+ K + + M+ +G G P +T+NA+I C G ++
Sbjct: 145 FPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG-------GVPDTITFNAVIGSLCKRGHLK 197
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA------------------YELKM 118
AL L GM G PDA +YN +I +P A Y L +
Sbjct: 198 SALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLV 257
Query: 119 EMDEKRI--LRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
E+ K R EV+ + +G D + Y+SL+N QG+ + ++ + G
Sbjct: 258 ELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQ 317
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI------------- 222
VT ++ I+ LS + +IL I N T TY+ L+
Sbjct: 318 PNVVTYNILIHSLSLHGYSDVVDDIL--KIMNETSISPTLVTYNILLNSLCKSGFLDRSI 375
Query: 223 --------ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
ENCS + + L+ G + E+ + ++ N P YN +I
Sbjct: 376 SLYIKMVSENCS-PDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVP 298
R +++ A MY MV G P
Sbjct: 435 LARMRSIKSAKEMYGEMVEKGIDP 458
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 111/300 (37%), Gaps = 43/300 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ + C G+ + + L + M +P F PS LI G +G+V++ I+
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHF----PSCTN---LIRGLIRIGQVDKGCKIM 168
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M G PD +++N VI C+ A E M SL L D
Sbjct: 169 NMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGM--------------SLSGCLPD 214
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++++ +GD A ++ G+ +T ++ + + K A E+L
Sbjct: 215 AKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLE 274
Query: 203 SMISNSCLSKTTHTTYDALIENCSNN-EFKSLVELVKGFRMRGL----VSEAARAHDTML 257
M C Y++L+ S +K ++ G+ V+ H L
Sbjct: 275 DMAREGCCPDI--NMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSL 332
Query: 258 HG---------------NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
HG + P YN L+ C+ +D++ ++Y +MV P + +
Sbjct: 333 HGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVT 392
>Medtr8g463610.1 | PPR containing plant-like protein | HC |
chr8:22423507-22425972 | 20130731
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 104/256 (40%), Gaps = 34/256 (13%)
Query: 43 MIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS 102
M G++PD +V Y +I G RV EA +L M ++GL+PDA YN VI
Sbjct: 1 MFKEGIVPD-------VVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQ 53
Query: 103 GFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA 162
G C + +A+ L +E+ E + ++ E +G+ E L N MEK
Sbjct: 54 GLCDVGLLNRAHSLLLEISEHNVCTHTILICEMCKRGMVAEA--QELFN------QMEKL 105
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
G VT + INGL K +AK + + LS H +
Sbjct: 106 ----------GCEPSVVTFNTLINGLCKANNLEKAKILFCKLEVGRRLS--LHLSLSQ-- 151
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM--LHGNHKPDGGVYNFLIVEHCRCKN 280
+ + L+K + + RA+ + L G KPD YN L+ C +
Sbjct: 152 ---GSGQVSDSARLLKKAKEMCEAGQILRAYKLIANLAGEVKPDIITYNILLNALCMDRE 208
Query: 281 VDKAYNMYTRMVHYGF 296
V+ AYN + + G+
Sbjct: 209 VNAAYNFFEFLQKKGY 224
>Medtr1g114300.1 | PPR containing plant-like protein | HC |
chr1:51588477-51583476 | 20130731
Length = 553
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 51/312 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+F LI AY G+F+ + M NG +P++V+ AL+ Y GR A
Sbjct: 143 FFMLITAYGKLGDFNGAEKVLGLMNKNGY-------APNVVSQTALMEAYGKGGRYNNAE 195
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KMEMDEKRILRMEEVVYESLM 137
I R M G P A +Y I++ F + + +A E+ K+ DEK LR ++ ++ ++
Sbjct: 196 AIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPDQKMFNMMI 255
Query: 138 ----QGLSDEDA------------------YSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ S E A Y+SLM+ E + I D ++
Sbjct: 256 YMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMS--FETNYKEVSNIYD-QMQRADLR 312
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+ V+ ++ IN K R EA + M+ + T Y+ L++
Sbjct: 313 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV--RPTRKAYNILLD------------ 358
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
F + G+V +A +M + PD Y ++ + +++ A + R++ G
Sbjct: 359 ---AFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDG 415
Query: 296 FVPHMFSVLALI 307
F P++ + LI
Sbjct: 416 FEPNVVTYGTLI 427
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 40/284 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG+ TY+SL + +VSN++DQM + PD +V+Y
Sbjct: 277 RGIKKATVTYNSLM----------SFETNYKEVSNIYDQMQRADLRPD-------VVSYA 319
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI Y R EEAL + M + G+ P +YNI++ F + +++
Sbjct: 320 LLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFS----------ISGMVEQA 369
Query: 124 RILRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
RI V++S+ + + D +Y+++++ Y+ DME A + + DG+ VT
Sbjct: 370 RI------VFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTY 423
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTT--HTTYDALIENCSNNEFKSLVELVKG 239
I G +K + E M+ + T T DA + N +F S V K
Sbjct: 424 GTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDA---HGKNGDFDSAVNWFKE 480
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
+ GL+ + + + + D N L++ N+ K
Sbjct: 481 MALNGLLPDQKAKNILLSLAKTEEDIKEANELVLHSIEINNLPK 524
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 45/308 (14%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
L R D G S+ Y ++N + + L ++M + V PS+VT
Sbjct: 240 LLRRKETDLGWVPSI-RVYNIMLNGWFRARKLKHAERLWEEMKNENV-------RPSVVT 291
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y L+ GYC + RVE+AL ++ M + G+ P+A+ YN +I E G+ E M+
Sbjct: 292 YGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALA---EAGRFKEALGMME 348
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+L++ + Y+SL+ + GD+E A + +++ G+L T
Sbjct: 349 RFHVLQIGPTL-----------STYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTY 397
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
+ F S+ + E + MI + TY +++ C + + V++
Sbjct: 398 NYFFRYFSRCGKVDEGMNLYTKMIESG--HNPDRLTYHLVLKMLCEEEKLELAVQVSMEM 455
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK--NVDKAYNMYTRMVHYGFVP 298
R +G + A + TML H CK +++A+ + M+ G +P
Sbjct: 456 RHKGYDMDLATS--TML----------------THLLCKMHKLEEAFAEFEDMIRRGIIP 497
Query: 299 HMFSVLAL 306
+ L
Sbjct: 498 QYLTFQKL 505
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 38/284 (13%)
Query: 21 FSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALG 80
F+LI+ S S+L + G+ P +P L+ +A+ + ++ +L
Sbjct: 73 FTLISTLFTNPSISPGSSLLTNLTQTGIKP-----TPPLL--HAVFDHFASSPKLLHSL- 124
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
L + + G PD+ ++ VI+ +++E A+ L ++ + E++V
Sbjct: 125 YLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLV-------- 176
Query: 141 SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY-LSESVTE----SVFINGLSKKARTR 195
++ ++ Y A+ M KA I E A D + +SV+E + I+ L K+ R
Sbjct: 177 -SVGTFAIIIRRY-ARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAR 234
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
EA E LL + Y+ ++ FR R L A R +
Sbjct: 235 EASEYLLRRKETDLGWVPSIRVYNIMLNGW--------------FRARKL-KHAERLWEE 279
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
M + N +P Y L+ +CR + V+KA M M G P+
Sbjct: 280 MKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPN 323
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCF---LGRVEEAL 79
LIN +C F K + ++ +G PD + TYN I YC +V+E L
Sbjct: 278 LINGWCKVRNFEKARKVMEERKEHGFEPD-------VFTYNNFIESYCHDKDFRKVDEVL 330
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+RG G P+AV+Y I++ G+ GKA +L ++E ++ + +V
Sbjct: 331 EEMRG---NGCPPNAVTYTILLLGY------GKAGQLSKALEEYERMKKDGIV------- 374
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
D YSSLM G ++ A + ++ G + + VT + I+ ++ A
Sbjct: 375 -PDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALR 433
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+L M SC K TY L++ C + +++ + D M
Sbjct: 434 LLKEMEETSC--KPDLQTYHPLLKMCCKKKRMKVLKFLL---------------DHMFKH 476
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ PD G Y L+ + +A + MV GF P
Sbjct: 477 DLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTP 515
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
G PD TY++ I +YC +F KV + ++M NG P+ VT +
Sbjct: 302 GFEPDVFTYNNF-------IESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGK 354
Query: 57 --------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P Y++L+Y GR+++A + MP+ G+ D V+
Sbjct: 355 AGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVT 414
Query: 97 YNIVISGFCRIREPGKAYELKMEMDE 122
YN +IS C + A L EM+E
Sbjct: 415 YNTMISTACAHSKEETALRLLKEMEE 440
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P TY++L NA S G + + N+ +M NGV PD LV
Sbjct: 72 MLRAAIPPSRSTYNNLINACGS-------SGNWKEALNVCKKMTDNGVGPD-------LV 117
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N ++ + + +AL + + PD ++NI+I ++++ KA ++ M
Sbjct: 118 THNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 177
Query: 121 DEKR----------------------ILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQG 157
EK+ I E L +GL +Y++L+ Y A+G
Sbjct: 178 KEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARG 237
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+A + EI +G+ + V+ + +N + + ++A+EI MI + L K +
Sbjct: 238 MENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNL-KPNIVS 295
Query: 218 YDALIE 223
Y+ALI+
Sbjct: 296 YNALID 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 43/308 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ S+I+ Y + G + M+ G+ P++V+YNAL+ Y G EAL
Sbjct: 191 FTSMIHLYSVCGHIENCEAAFNMMLAEGL-------KPNIVSYNALLGAYAARGMENEAL 243
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + + G PD VSY +++ + R R+P KA E+ +M ++ L+ V Y +L+
Sbjct: 244 QVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNLKPNIVSYNALI-- 300
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
DAY S G +E A + RE+ D V+ + + + +
Sbjct: 301 ----DAYGS-------NGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDT 349
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSN-NEFKSLVELVKGFRMRGLVS----------- 247
+L + K Y++ I + N E+ ++L R + + S
Sbjct: 350 VLSAAEMRGI--KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISG 407
Query: 248 --------EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
EA + M+H VY+ +I + + + +A + + M G P
Sbjct: 408 CCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPD 467
Query: 300 MFSVLALI 307
+ + A++
Sbjct: 468 VVTYTAML 475
>Medtr0026s0200.1 | PPR containing plant-like protein | HC |
scaffold0026:95081-98739 | 20130731
Length = 778
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 45/247 (18%)
Query: 30 GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMG 89
G KV + ++M G P+ +Y+ LI +C GR+E+ + M +
Sbjct: 257 SGLVEKVEEIWNEMSEMGC-------DPNAYSYSLLIAAFCDGGRMEDCEKMWEKMRKKE 309
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA---- 145
+ D VSYN +I GFC+I + G+A E EM GL DA
Sbjct: 310 IEADVVSYNTIIGGFCKIGDVGRAEEFYREM------------------GLVGIDATVST 351
Query: 146 YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
Y L+ Y D+E A ++ +++ + ++ T + + L K R EA + L S +
Sbjct: 352 YEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCNKGRVEEAMKFLRSGV 411
Query: 206 SNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
+D + + KS L+KGF G + EA + M+ + +
Sbjct: 412 GK----------FDLVPKE------KSYEALIKGFCFEGRMDEALKLQAEMIGKGFQLNS 455
Query: 266 GVYNFLI 272
+Y I
Sbjct: 456 EIYEVFI 462
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 2 LWRGLSP---DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
+W +S D YS Y LI A+C GG + ++M + D
Sbjct: 266 IWNEMSEMGCDPNAYS-----YSLLIAAFCDGGRMEDCEKMWEKMRKKEIEAD------- 313
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V+YN +I G+C +G V A R M +G+ +Y ++ G+C I + A +
Sbjct: 314 VVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYK 373
Query: 119 EMDEK-------------RIL----RMEEVVYESLMQG------LSDEDAYSSLMNDYLA 155
+M K R+L R+EE + + L G + E +Y +L+ +
Sbjct: 374 DMLRKDFRPDASTLDMVVRLLCNKGRVEEAM-KFLRSGVGKFDLVPKEKSYEALIKGFCF 432
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFING 187
+G M++A L E+ G+ S VFI+G
Sbjct: 433 EGRMDEALKLQAEMIGKGFQLNSEIYEVFIDG 464
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 40/262 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P TY++L NA S G + + N+ +M NGV PD LV
Sbjct: 211 MLRAAIPPSRSTYNNLINACGS-------SGNWKEALNVCKKMTDNGVGPD-------LV 256
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N ++ + + +AL + + PD ++NI+I ++++ KA ++ M
Sbjct: 257 THNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 316
Query: 121 DEKR----------------------ILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQG 157
EK+ I E L +GL +Y++L+ Y A+G
Sbjct: 317 KEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARG 376
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+A + EI +G+ + V+ + +N + + ++A+EI MI + L K +
Sbjct: 377 MENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNL-KPNIVS 434
Query: 218 YDALIEN-CSNNEFKSLVELVK 238
Y+ALI+ SN + +E+++
Sbjct: 435 YNALIDAYGSNGLLEDAIEILR 456
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 43/309 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ S+I+ Y + G + M+ G+ P++V+YNAL+ Y G EA
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGL-------KPNIVSYNALLGAYAARGMENEA 381
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + + + G PD VSY +++ + R R+P KA E+ +M ++ L+ V Y +L+
Sbjct: 382 LQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNLKPNIVSYNALI- 439
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
DAY S G +E A + RE+ D V+ + + + +
Sbjct: 440 -----DAYGS-------NGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 487
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSN-NEFKSLVELVKGFRMRGLVS---------- 247
+L + K Y++ I + N E+ ++L R + + S
Sbjct: 488 TVLSAAEMRGI--KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLIS 545
Query: 248 ---------EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
EA + M+H VY+ +I + + + +A + + M G P
Sbjct: 546 GCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSP 605
Query: 299 HMFSVLALI 307
+ + A++
Sbjct: 606 DVVTYTAML 614
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+IN +C + NL ++M ++PD +VTY++LI G+C ++ AL ++
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPD-------VVTYSSLIDGFCKSEKISHALNLV 53
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + G PD + YN ++ C+ + KA L + QG+
Sbjct: 54 NEMHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKN---------------QGIQP 98
Query: 143 EDAYSSLMNDYLAQGD-MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+++ D L +G+ +E A + +++ GY T + I+GL EA +L
Sbjct: 99 SVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALL 158
Query: 202 LSMISNSCLSKTTHTTYDALI 222
L M NSC+ TY+ +I
Sbjct: 159 LEMKDNSCIPNV--VTYEIII 177
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + + PD TYSSL I+ +C + S NL ++M G PD ++
Sbjct: 21 MQCKKIIPDVVTYSSL-------IDGFCKSEKISHALNLVNEMHDRGQPPD-------II 66
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN+++ C +V++A+ +L G+ P +Y I+I G C+ G+ E
Sbjct: 67 IYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCK----GERLE----- 117
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
D + I + + L++G + + Y+ +++ G ++A L E+ + + V
Sbjct: 118 DARNIFK------DLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVV 171
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCL 210
T + I L K +A++I+ MI+ L
Sbjct: 172 TYEIIIRSLFDKDENDKAEKIIREMITRDLL 202
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + P TY++L NA S G + + N+ +M NGV PD LV
Sbjct: 7 MLRAAIPPSRSTYNNLINACGS-------SGNWKEALNVCKKMTDNGVGPD-------LV 52
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N ++ + + +AL + + PD ++NI+I ++++ KA ++ M
Sbjct: 53 THNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 112
Query: 121 DEKR----------------------ILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQG 157
EK+ I E L +GL +Y++L+ Y A+G
Sbjct: 113 KEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARG 172
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+A + EI +G+ + V+ + +N + + ++A+EI MI + L K +
Sbjct: 173 MENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNL-KPNIVS 230
Query: 218 YDALIE 223
Y+ALI+
Sbjct: 231 YNALID 236
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 43/308 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ S+I+ Y + G + M+ G+ P++V+YNAL+ Y G EAL
Sbjct: 126 FTSMIHLYSVCGHIENCEAAFNMMLAEGL-------KPNIVSYNALLGAYAARGMENEAL 178
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ + + G PD VSY +++ + R R+P KA E+ +M ++ L+ V Y +L+
Sbjct: 179 QVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI-FKMIKRNNLKPNIVSYNALI-- 235
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
DAY S G +E A + RE+ D V+ + + + +
Sbjct: 236 ----DAYGS-------NGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDT 284
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSN-NEFKSLVELVKGFRMRGLVS----------- 247
+L + K Y++ I + N E+ ++L R + + S
Sbjct: 285 VLSAAEMRGI--KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISG 342
Query: 248 --------EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
EA + M+H VY+ +I + + + +A + + M G P
Sbjct: 343 CCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPD 402
Query: 300 MFSVLALI 307
+ + A++
Sbjct: 403 VVTYTAML 410
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 121/306 (39%), Gaps = 57/306 (18%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI+ + G F + ++QM+ + + PD + T+N LI GYC + AL +
Sbjct: 184 LIHGFVKSGRFDRAFEFYNQMVKDRIKPD-------VFTFNILISGYCRDFKFGFALEMF 236
Query: 83 RGMPEMGLSPDAVSYNIVISGF---CRIREP-GKAYELKMEMDEKRILRMEEVVYESLMQ 138
M +MG P+ V++N +I G CR+ E G YE+ +E+ ++ +V E L+
Sbjct: 237 DEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEM-IELG----CQLSDVTCEILVD 291
Query: 139 GLSDEDAYSSLMN---------------DYL-------AQGDMEKAYILDREIAHDGYLS 176
GL E S + + DY +G+ KA + E+ G +
Sbjct: 292 GLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVP 351
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC------SNNEF 230
++ V I+GL + EA ++ M+ + T L + C N
Sbjct: 352 SLISCIVMIDGLRGLGKIEEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDAGRTEDANRL 411
Query: 231 KSLVE-------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
+ L LV G+R G SE + ML PD YN L+
Sbjct: 412 RLLASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSN 471
Query: 278 CKNVDK 283
C+ ++
Sbjct: 472 CQRPNR 477
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ K D + V+ + G PS+ N LI+G+ GR + A M + + P
Sbjct: 152 YCKAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKP 211
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEK-----------------RILRMEE---VV 132
D ++NI+ISG+CR + G A E+ EM + R R++E +V
Sbjct: 212 DVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMV 271
Query: 133 YESLMQGLSDEDAYSSLMNDYLA-QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
YE + G D ++ D L +G + + L E + G L + V + L K
Sbjct: 272 YEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGK 331
Query: 192 ARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAAR 251
+A E++ + S C+ +LI S + ++ G R G + EA R
Sbjct: 332 GEAFKALEVIYELWSKGCVP--------SLI---------SCIVMIDGLRGLGKIEEAMR 374
Query: 252 AHDTML 257
+ ML
Sbjct: 375 LVEKML 380
>Medtr3g023180.1 | PPR containing plant-like protein | HC |
chr3:7000866-7006661 | 20130731
Length = 723
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHN-GVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
LI + G +V +++D+M + GV P + YN ++ G ++ AL +
Sbjct: 195 LIRMHSDAGRGLRVYHVYDKMRNKFGV-------KPRVFLYNRIMDALVKTGHLDLALSV 247
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
E GL ++V++ I+I G C+ GK E+ +E+ + RM E + +
Sbjct: 248 YNDFREDGLVEESVTFMILIKGLCK---GGKIDEM-LEV----LGRMREKLCKP------ 293
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D AY++L+ + +G+++ + +E+ D + + I GL+K R E E+
Sbjct: 294 DVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVSEGYELF 353
Query: 202 LSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M S L Y +L+E+ + N+ +L+K LVS RA
Sbjct: 354 KEMKSKGHL--IDRAIYGSLVESFVAGNKVGLAFDLLKD-----LVSSGYRA-------- 398
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D G+YN LI C V+KAY ++ + G P SV L+
Sbjct: 399 ---DLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLL 442
>Medtr3g023180.2 | PPR containing plant-like protein | HC |
chr3:7000585-7006661 | 20130731
Length = 723
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHN-GVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
LI + G +V +++D+M + GV P + YN ++ G ++ AL +
Sbjct: 195 LIRMHSDAGRGLRVYHVYDKMRNKFGV-------KPRVFLYNRIMDALVKTGHLDLALSV 247
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
E GL ++V++ I+I G C+ GK E+ +E+ + RM E + +
Sbjct: 248 YNDFREDGLVEESVTFMILIKGLCK---GGKIDEM-LEV----LGRMREKLCKP------ 293
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D AY++L+ + +G+++ + +E+ D + + I GL+K R E E+
Sbjct: 294 DVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVSEGYELF 353
Query: 202 LSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M S L Y +L+E+ + N+ +L+K LVS RA
Sbjct: 354 KEMKSKGHL--IDRAIYGSLVESFVAGNKVGLAFDLLKD-----LVSSGYRA-------- 398
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D G+YN LI C V+KAY ++ + G P SV L+
Sbjct: 399 ---DLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLL 442
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 52/312 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ ++I+ +C GE + D M +GV PSLVT+N LI Y LG + A
Sbjct: 251 AWNAMISGFCQNGEIGQAQKYFDAMQKDGV-------EPSLVTWNILISCYNQLGHCDLA 303
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM-----DEKRILRMEEVVY 133
+ ++R M G++PD ++ +ISGF + A +L EM + I
Sbjct: 304 IDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASA 363
Query: 134 ESLMQGLS----------------DEDAYSSLMNDYLAQGDMEKA-YILDREIAHDGYLS 176
+ ++ LS + +SL++ Y GD++ A +I D D Y
Sbjct: 364 CAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSW 423
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
S+ F G KA E+ + M + S T++ +I
Sbjct: 424 NSIIGGYFQAGFCGKAH-----ELFMKMQESD--SPPNIITWNIMIT------------- 463
Query: 237 VKGFRMRGLVSEAARAHDTM-LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G+ G +A ++ G K + +N LI + DKA ++ M
Sbjct: 464 --GYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCH 521
Query: 296 FVPHMFSVLALI 307
+P+ ++L+++
Sbjct: 522 ILPNSVTILSIL 533
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 145/372 (38%), Gaps = 93/372 (25%)
Query: 9 DEGTYSSLFNAYF---------SLINAYCLGGEFSKVSNLHDQMIHNGVLPD---FVTGS 56
D TY+S+ AY+ SL N+ + S S + I N + D + T
Sbjct: 59 DIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNS-IITACIQNDNINDAFSYFTAM 117
Query: 57 P--SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
P ++ +YNA++ G+ +GRVEEA + +P P+ VSY ++I G+ ++ E G
Sbjct: 118 PEKNVASYNAMMSGFVKMGRVEEAKKVFEEIPR----PNVVSYTVMIDGYMKM-EGGSGI 172
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDED------------------AYSSLMNDYLAQ 156
+ + + R EV + ++ GL + A+++++ + Q
Sbjct: 173 KRARALFDAMPSR-NEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQ 231
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN--------- 207
G +++A+ L ++I + ++ I G ++ R EA + M+
Sbjct: 232 GKIDEAWNLFQQI----RCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTF 287
Query: 208 -----SCLS-------------------KTTHTTYDALI----------------ENCSN 227
+C S + + +AL+ + S+
Sbjct: 288 VSLFTACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISH 347
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+ S ++ F GL A D M+ PDG + L+ CR VD+ N+
Sbjct: 348 PDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNL 407
Query: 288 YTRMVH-YGFVP 298
+ MVH YG +P
Sbjct: 408 FDLMVHKYGILP 419
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 44/291 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +L++ +C G+ L ++M N +PS Y + I G+ L + AL
Sbjct: 501 YETLVDGFCREGDMVSAGKLLEEMGSNNF-------APSAFCYCSQIKGFYKLRQFANAL 553
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M + G+ PD ++ N ++S +CR RE +A L E + G
Sbjct: 554 KVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALALSEEFRD---------------HG 598
Query: 140 LS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+S + +Y+ +N + EKA L + L V S I+ +K+ +++A
Sbjct: 599 VSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAV 658
Query: 199 EILLSMIS-NSCLSKTTHTTY-DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
++ M + THT D I NC ++ L E D
Sbjct: 659 KLFTRMTKVGITFNIKTHTALIDLCIRNCKIDKACDLFE------------------DME 700
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
G H PD YN LI C + A ++ RM+ G P++ + I
Sbjct: 701 KRGVH-PDQITYNTLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFI 750
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 135/351 (38%), Gaps = 71/351 (20%)
Query: 18 NAYFSLINAYC----LGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
+AY ++N YC + S S + + +G +P++VTY+ I G C G
Sbjct: 340 HAYTIMMNFYCRDVRCSADISPASEIFGNIYRSG-------ETPNVVTYSTYIKGLCKAG 392
Query: 74 -------------RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
++EA +L M +G+ PD Y+I+I FC+ + K +L+ +M
Sbjct: 393 SLRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDLREDM 452
Query: 121 DEKRI-------------------LRMEEVVYESLMQGLS----DEDAYSSLMNDYLAQG 157
+I + M+ V+ + G S D+ Y +L++ + +G
Sbjct: 453 KLNQIKPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFCREG 512
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
DM A L E+ + + + I G K + A ++ S++ + T
Sbjct: 513 DMVSAGKLLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALKV-YSIMQKRGIRPDTIAC 571
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLV-------------------SEAARAHDTMLH 258
L C EF + L + FR G+ +A + ML
Sbjct: 572 NHILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLK 631
Query: 259 GNHKPDGGVYNFLIVEHCRCK--NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N P GV N+ + C K N KA ++TRM G ++ + ALI
Sbjct: 632 RNVLP--GVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALI 680
>Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:48037-47705 | 20130731
Length = 110
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R +P+ TYSSL I+ C G FS L D+M NG P++
Sbjct: 12 MHCRRFAPNTITYSSL-------IDGLCKAGRFSCAWELVDEMHDNG-------QPPNIF 57
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
TYN+LI C +V++A+ ++ + + G+ PD +YNI+I G C+
Sbjct: 58 TYNSLINSLCKNYQVDKAIALVNKIKDQGIQPDMFAYNILIDGLCK 103
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 31/233 (13%)
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
+ A + + + G+ PD SYNI++ FC + AY L +M ++ ++
Sbjct: 163 LRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVV-------- 214
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
D +Y LM + + A L ++ + G++ +S T + +N L +K +
Sbjct: 215 ------PDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKL 268
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
REA ++L M C H Y+ +I GF G +A + D
Sbjct: 269 REAYKLLCRMKVKGCNPDIVH--YNTVIL---------------GFCREGRAHDACKVID 311
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M P+ Y L+ C +D+A M+ GF PH + AL+
Sbjct: 312 DMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALV 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 45/272 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD +Y+ L + A+CL G+ S L ++M V+PD + +Y
Sbjct: 177 GVFPDTKSYNIL-------MRAFCLNGDISIAYTLFNKMFKRDVVPD-------IQSYRI 222
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ C +V A+ + M G PD+ +Y +++ CR ++ +AY+L M K
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKG 282
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
++V+ Y++++ + +G A + ++ +G L V+
Sbjct: 283 C--NPDIVH------------YNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTL 328
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+NGL EA + + M+S + F + LVKGF G
Sbjct: 329 VNGLCHLGMLDEATKYVEEMLSKG-----------------FSPHFAVIHALVKGFCNVG 371
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
+ EA L P + ++ + C
Sbjct: 372 RIEEACGVLTKSLEHREAPHKDTWMIIVPQIC 403
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +G PD TY++L +N+ C + + L +M G PD +V
Sbjct: 243 MLNKGFVPDSFTYTTL-------LNSLCRKKKLREAYKLLCRMKVKGCNPD-------IV 288
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRI 107
YN +I G+C GR +A ++ M G P+ VSY +++G C +
Sbjct: 289 HYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHL 335
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY +I Y + EF K + D+MI G +P+ + TYN++I G+C G+ +EA
Sbjct: 418 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPN-------VFTYNSMIRGFCMAGKFDEA 470
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+ M G SP+ V Y+ +++ + + +A ++ +M EK
Sbjct: 471 CSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 515
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 12 TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCF 71
Y ++Y ++++ + + + ++DQM+ G L D + TYN ++
Sbjct: 271 NYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSD-------VFTYNIVMVAKYR 323
Query: 72 LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEV 131
LG++ + + M GLSPD +YNI++ R E KA EL M E+ I V
Sbjct: 324 LGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGI-EPTVV 382
Query: 132 VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
+ +L+ GLS S ++D +I D E+ G + + V +V I G
Sbjct: 383 HFTTLIDGLSR----SGHLDDC--------EHIFD-EMVRIGIIPDVVAYTVMITGYVVA 429
Query: 192 ARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAAR 251
+A+++ MIS + TY+++I +GF M G EA
Sbjct: 430 LEFEKAQKMFDKMISRGQIPNV--FTYNSMI---------------RGFCMAGKFDEACS 472
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
M P+ VY+ L+ + + +A + +M+ G
Sbjct: 473 MLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 516
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY +I Y + EF K + D+MI G +P+ + TYN++I G+C G+ +EA
Sbjct: 394 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPN-------VFTYNSMIRGFCMAGKFDEA 446
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+ M G SP+ V Y+ +++ + + +A ++ +M EK
Sbjct: 447 CSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 491
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 12 TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCF 71
Y ++Y ++++ + + + ++DQM+ G L D + TYN ++
Sbjct: 247 NYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSD-------VFTYNIVMVAKYR 299
Query: 72 LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEV 131
LG++ + + M GLSPD +YNI++ R E KA EL M E+ I V
Sbjct: 300 LGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGI-EPTVV 358
Query: 132 VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
+ +L+ GLS S ++D +I D E+ G + + V +V I G
Sbjct: 359 HFTTLIDGLSR----SGHLDDC--------EHIFD-EMVRIGIIPDVVAYTVMITGYVVA 405
Query: 192 ARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAAR 251
+A+++ MIS + TY+++I +GF M G EA
Sbjct: 406 LEFEKAQKMFDKMISRGQIPNV--FTYNSMI---------------RGFCMAGKFDEACS 448
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
M P+ VY+ L+ + + +A + +M+ G
Sbjct: 449 MLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 492
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +++N C G + L D+ + G+ PD +VT+NALI GY GR E
Sbjct: 253 SYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPD-------VVTFNALIEGYSREGREMEG 305
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM------------------ 120
+G+L+ M E G D ++Y V+ G + E +A+ + EM
Sbjct: 306 VGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRR 365
Query: 121 ------DEKRILRMEEVVYESLMQ-GLSDEDAYSSLMNDYLAQGD-MEKAYILDREIAHD 172
EK +L V+E + + GL + +M + L +G+ ++A + ++
Sbjct: 366 LCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRW 425
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
GY E + I GL + R EA LL + +N
Sbjct: 426 GYSLEGIAFEEVIEGLCGQGRVDEAVSTLLLLQAN 460
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P TY+ +I +C +EEA +L + E G PD+ + ++I+ C+ + KA E+
Sbjct: 144 PDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEV 203
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
E E++ L++ Y L++GL+ Y+ + D ++D + + G
Sbjct: 204 -FEFLERKGLKLGVQAYNCLLRGLA-----------YVGRVDEAVEILMDMKTGNIGV-- 249
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL--V 234
+ + S +NGL K R+ EA E+ + + T++ALIE S E + + V
Sbjct: 250 DVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGL--RPDVVTFNALIEGYS-REGREMEGV 306
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
++K + G V++ + T+LHG K + V +A+ +Y MV
Sbjct: 307 GVLKMMKEHGCVADLIN-YKTVLHGLLKWNETV---------------EAFGVYKEMVRI 350
Query: 295 GF 296
GF
Sbjct: 351 GF 352
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L G PD T + L IN+ C G+ K + + + G+ +
Sbjct: 172 VLENGFEPDSATITVL-------INSLCKRGKVKKAMEVFEFLERKGL-------KLGVQ 217
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN L+ G ++GRV+EA+ IL M + D SY+ V++G C++ +A EL
Sbjct: 218 AYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMEL---F 274
Query: 121 DEK--RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
DE LR + V + +L++G S E +ME +L H G +++
Sbjct: 275 DEAVGVGLRPDVVTFNALIEGYSREGR------------EMEGVGVLKMMKEH-GCVADL 321
Query: 179 VTESVFINGLSKKARTREA 197
+ ++GL K T EA
Sbjct: 322 INYKTVLHGLLKWNETVEA 340
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
EG L N LIN++C G ++ +++ NG PD +T+ LI G
Sbjct: 95 EGIKLDLVNCSI-LINSFCQLGHNPFAFSVLAKILKNGYEPD-------TITFTTLIKGL 146
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C G + +AL + MG D V Y +I+G C++ E A EL +D K I +++
Sbjct: 147 CLKGDIHQALHFHDKVIAMGFHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLIKKVD 206
Query: 130 EVV--YESL--MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E + +E + + + D Y+SL++ G + A L E+ G + +T
Sbjct: 207 EAINLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 261
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 30/239 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++V+Y LI GYC +G + +A+ + M E GL P++++Y+++I GF R R+ EL
Sbjct: 143 PNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGREL 202
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
++ E+ ++ME+ + ++ A+++L++ +G + + + + L
Sbjct: 203 MCKLWER--MKMEDELSVNVA-------AFANLIDSLCKEGFFNEVFEIAELMPCGSSLP 253
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
E V I+ K R A I+ M + + +Y+ +I S +
Sbjct: 254 EQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVP--SDVSYNHIIHGLSKD-------- 303
Query: 237 VKGFRMRG--LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
G MRG L+ E A ++ Y L+ CR +VDKA + M++
Sbjct: 304 --GDCMRGYQLLEEGAEFGFSLCE-------HTYKVLVEALCRVLDVDKAREVLKLMLY 353
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 125/327 (38%), Gaps = 43/327 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML GL P+ TYS LI + G +F L ++ + D + S ++
Sbjct: 171 MLESGLEPNSMTYS-------VLIRGFLRGRDFESGRELMCKLWERMKMEDEL--SVNVA 221
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ LI C G E I MP P+ V Y +I FC++ A + M
Sbjct: 222 AFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLM 281
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++R + +V Y ++ GLS + GD + Y L E A G+ T
Sbjct: 282 RKRRFVP-SDVSYNHIIHGLSKD-------------GDCMRGYQLLEEGAEFGFSLCEHT 327
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKT----------THTTYDA--------LI 222
V + L + +A+E+L M+ + KT H ++
Sbjct: 328 YKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFML 387
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH-KPDGGVYNFLIVEHCRCKNV 281
E+ + +L ++ GF G EA + + ML G PD + LI + V
Sbjct: 388 ESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKV 447
Query: 282 DKAYNMYTR-MVHYGFVPHMFSVLALI 307
D+A +++ R M G P + + LI
Sbjct: 448 DEALDLFNRVMPENGLKPGVVTYNVLI 474
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 82/216 (37%), Gaps = 44/216 (20%)
Query: 22 SLINAYCLGGEFSK-VSNLHDQMIHNGVLPDFVTGS------------------------ 56
++IN +C G F + + L+D ++ PD VT +
Sbjct: 400 TVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMP 459
Query: 57 -----PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
P +VTYN LI L R +A + M G++PD+ +Y +++ G C +
Sbjct: 460 ENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIE 519
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+A + V++ S G+ D Y++++ + G +A E+
Sbjct: 520 EAKSF-----------WQSVIWPS---GIHDNFVYAAILKGLCSSGKFNEACHFLYELVD 565
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
G + ++ IN RE +I+ M N
Sbjct: 566 SGISPNIYSYNILINCACNLGLKREVYQIVREMNKN 601
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN + C + E L +L M E D ++ N VI+GFC++ +A ++ +M
Sbjct: 363 YNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDML 422
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+ + V + +L+ GL D + ++ + +R + +G VT
Sbjct: 423 LGKFCAPDVVTFTTLISGLLDAEKVDEALD------------LFNRVMPENGLKPGVVTY 470
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
+V I L K R +A E+ +M + + TTY ++E C ++
Sbjct: 471 NVLIRCLYKLKRPNDAFEVFNNMAGDGITPDS--TTYTVIVEGLCECDQ----------- 517
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ EA +++ + D VY ++ C ++A + +V G P++
Sbjct: 518 -----IEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNI 572
Query: 301 FSVLALI 307
+S LI
Sbjct: 573 YSYNILI 579
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGE--FSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
G+ P+ TY+S+ +A GE F V +D+MI NG++PD +TY
Sbjct: 278 GVVPNVITYNSIIDA--------GAKGEVSFDVVVKFYDEMIANGLMPD-------RLTY 322
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N+L+ G E A +L M + PD +YN + C+ + A + EM
Sbjct: 323 NSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSS 382
Query: 123 KRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGDME 160
KR+ V Y ++M G + EDA Y++L+ Y G+++
Sbjct: 383 KRVWP-NVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLD 441
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
+A +E+ G + VT + ++G K E + + M + + T TY
Sbjct: 442 EAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNT--LTYST 499
Query: 221 LIENCSNNE-FKSLVELVKGFRMRGL 245
+I+ + E F+ +++ + F+M L
Sbjct: 500 MIDMYTKGEMFQEAMDVYREFKMARL 525
>Medtr5g088510.1 | PPR containing plant-like protein | LC |
chr5:38416793-38420408 | 20130731
Length = 978
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 109/300 (36%), Gaps = 72/300 (24%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P L YN LI R+ E +L M E + PD ++ N+V+ FC+I A +L
Sbjct: 354 PHLYRYNMLICRLLRENRLREVYDLLMDMYESSIPPDQITMNVVLCFFCKIGMVNVALQL 413
Query: 117 KMEMDEKRILRMEEVVYESLMQ-GLSDED-AYSSLMNDYLAQGDMEKAY-ILDREIAHDG 173
YES Q GL+ AY L+ + G +++AY + R I +D
Sbjct: 414 ----------------YESRSQFGLNPNTIAYKYLILNLCWDGSVKEAYSVFKRFIGNDK 457
Query: 174 YLSESVTESVFINGLSKKARTREAKEIL---------LSMISNSCL-------------- 210
+ T + N L ++ + E KE++ LS ++N+
Sbjct: 458 LFPDRETFTTLANALCRECKVDEMKELMDLAKEREFTLSPVTNAKFISALCQAGRLEDGY 517
Query: 211 -------SKTTHTTYDALIE---------------------NCSNNEFKSLVELVKGFRM 242
+ T YD +IE N F + + M
Sbjct: 518 DEHGKLENATAKLYYDKMIEGFIKSNKGEIAARLLVEMKEKNLRLTRFSCRAVICRLLDM 577
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
++ + D++ G KPD ++NF IV N D A +Y M VP + S
Sbjct: 578 DNPITRVTKLLDSLTQG--KPDTKIFNFFIVGAGHANNTDLAREVYELMPRNNIVPTLLS 635
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++ D +Y+ + IN +C + + NL ++M ++PD +V
Sbjct: 1 MASRGVTHDVSSYNIM-------INGFCKIKKVDEAMNLFEEMHCKNIIPD-------VV 46
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G C G++ AL ++ M + G PD ++YN +++ C+ + KA L ++
Sbjct: 47 TYNSLIDGICKSGKISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKL 106
Query: 121 DEKRI 125
++ I
Sbjct: 107 KDQGI 111
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 85 MPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED 144
M G++ D SYNI+I+GFC+I++ +A L EM K I+ + V Y SL+ G+
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIP-DVVTYNSLIDGIC--- 56
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
G + A L E+ G L + +T + +N L K + +A +L +
Sbjct: 57 ----------KSGKISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKL 106
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 42/225 (18%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
++G + L AY +L+ A C GG + + + M+ V PD TY+ I
Sbjct: 241 EQGCHVDLL-AYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPD-------AFTYSIFIRS 292
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE------ 122
YC V A G+L M L P+ +YN +I C+I++ +AY+L EM
Sbjct: 293 YCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPD 352
Query: 123 ---------------------KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEK 161
K I RME+ V D Y+ ++ + G +K
Sbjct: 353 TWSYNAIQAYHCDHCEVNRALKLISRMEKDV------CFPDRHTYNMVLKLLIRIGRFDK 406
Query: 162 AYILDREIAHDGYLSESVTESVFINGL-SKKARTREAKEILLSMI 205
A + + + T SV I+GL KK + EA + MI
Sbjct: 407 ATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMI 451
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 37 SNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
++L D I + V D PS++ + L+Y C V +A + L +
Sbjct: 157 ADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTK-T 215
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
Y+I+I+G+ +I + GKA EL M E+ ++ + Y +L++ L M D+L
Sbjct: 216 YSILINGWGKIGDSGKARELFDAMLEQGC-HVDLLAYNNLLEALCKGGHVDEAM-DFL-- 271
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
DM L +++ D + T S+FI A +L M + L
Sbjct: 272 NDM-----LSKKVEPDAF-----TYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVF-- 319
Query: 217 TYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
TY+ +I K L ++ K V EA + D M+ KPD YN + HC
Sbjct: 320 TYNCII--------KRLCKIKK-------VEEAYQLLDEMISSGLKPDTWSYNAIQAYHC 364
Query: 277 RCKNVDKAYNMYTRM 291
V++A + +RM
Sbjct: 365 DHCEVNRALKLISRM 379
>Medtr1g113010.1 | PPR containing plant-like protein | HC |
chr1:51277135-51279295 | 20130731
Length = 630
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY S+++A G+F + L ++MI P + + +L ++N ++ GYC G+ +EA
Sbjct: 313 AYNSVLDALAKNGKFDEAMKLFNRMIKEHNPPAKL--AVNLGSFNVMVDGYCAEGKFKEA 370
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ I R M E PD +S+N +I C + IL EEV E +
Sbjct: 371 IEIFRSMGESRCKPDTLSFNNLIEQLC---------------NNGMILEAEEVYGEMEGK 415
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G++ DE Y LM+ + + A +++ G + ++GL K +T +A
Sbjct: 416 GVNHDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKTDDA 475
Query: 198 KEILLSMI 205
K M+
Sbjct: 476 KSFFDLMV 483
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD Y+ + + G++ K+ L D+++ G++PD + TYN
Sbjct: 285 GIKPDIVCYTIVLSGIVK-------EGDYVKLDELFDEILVLGLVPD-------VYTYNV 330
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
I G C +EAL I+ M ++G P+ V+YN ++ C + GKA KR
Sbjct: 331 YINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKA---------KR 381
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
+++ E ++G+ + Y +++ + +G++ +A +L E+ + S T
Sbjct: 382 VMK------EMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDS 435
Query: 184 FINGLSKKARTREAKEILLSMISNS 208
++ + +K +A ++ +++ S
Sbjct: 436 IVHQMCQKGLISDALVLMNKIVAKS 460
>Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29889526-29890146 | 20130731
Length = 188
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y ++IN +C + + NL +M ++P+ +VTYN+LI G G +
Sbjct: 11 SYNTMINGFCKIKKVDEAMNLFKEMHCKNIIPN-------VVTYNSLIDGLSKSGIISYV 63
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK--RILRMEEVVYESL 136
L ++ M + G+ P+ V+YN ++ C+ + K L + ++ R+ + + L
Sbjct: 64 LQLVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARNIFEDLL 123
Query: 137 MQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
++G + + Y+ ++ + + G +++ L ++ +G +S +VT + I L
Sbjct: 124 VKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNAVTYEIIIRSL 176
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 53 VTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK 112
VT PS YN +I G+C + +V+EA+ + + M + P+ V+YN +I G +
Sbjct: 6 VTNVPS---YNTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGIISY 62
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDE---DAYSSLMNDYLAQ-GDMEKAYILDRE 168
+L +M + R + V Y S++ L D +L + Q G ++ A + +
Sbjct: 63 VLQLVDQMHD-RGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARNIFED 121
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
+ GY T +V I G E+ +L M N C+S TY+ +I + N
Sbjct: 122 LLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNA--VTYEIIIRSLFAN 179
Query: 229 E 229
+
Sbjct: 180 D 180
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 110/294 (37%), Gaps = 54/294 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ L++A C K + D M G P TY+ L+ G+ + +A
Sbjct: 168 AFNGLLSALCKSRNVRKAQEIFDSM--KGRF------EPDSKTYSILLEGWGKEPNLPKA 219
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G +PD V+Y I++ C+ +A E+ EMD+ +
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI------- 272
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
YS L++ Y + +E A + E+ +G ++ V + I K + +
Sbjct: 273 -------YSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVH 325
Query: 199 EILLSMISNSCL--SKTTHTTYDALIENCSNNE----FKSLVELVKGFRMRGLVSEAARA 252
+L M SN S+T + +LI ++ F+ +++L
Sbjct: 326 RVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC--------------- 370
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HMFSVL 304
+PD Y LI C VD A ++ M FVP H FSVL
Sbjct: 371 ---------EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G +PD TY + ++ C G + + +M N P+
Sbjct: 226 MVSAGCNPDIVTYGIM-------VDILCKAGRVDEAVEVVKEMDDNDC-------RPTSF 271
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y+ L++ Y R+E+A+ + M + G++ D V YN +I FC+ + + + EM
Sbjct: 272 IYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEM 331
Query: 121 DEKRIL---RMEEVVYESLM-QGLSDE----------------DAYSSLMNDYLAQGDME 160
+ I R V+ SL+ QG +D+ D Y+ L+ + + +++
Sbjct: 332 ESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDADTYTMLIKMFCERNEVD 391
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
A + + + ++ T SV INGL K +A +L MI
Sbjct: 392 MALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMI 436
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI A+C + V + +M NG+ +P+ T N ++ G ++A
Sbjct: 307 VYNALIGAFCKANKLKNVHRVLKEMESNGI-------APNSRTCNVIMSSLISQGETDKA 359
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ R M ++ PDA +Y ++I FC E A ++ M K Q
Sbjct: 360 FSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSK--------------Q 404
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +S L+N A+G+ KA IL E+ G +T
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 110/294 (37%), Gaps = 54/294 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ L++A C K + D M G P TY+ L+ G+ + +A
Sbjct: 168 AFNGLLSALCKSRNVRKAQEIFDSM--KGRF------EPDSKTYSILLEGWGKEPNLPKA 219
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G +PD V+Y I++ C+ +A E+ EMD+ +
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI------- 272
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
YS L++ Y + +E A + E+ +G ++ V + I K + +
Sbjct: 273 -------YSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVH 325
Query: 199 EILLSMISNSCL--SKTTHTTYDALIENCSNNE----FKSLVELVKGFRMRGLVSEAARA 252
+L M SN S+T + +LI ++ F+ +++L
Sbjct: 326 RVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC--------------- 370
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HMFSVL 304
+PD Y LI C VD A ++ M FVP H FSVL
Sbjct: 371 ---------EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G +PD TY + ++ C G + + +M N P+
Sbjct: 226 MVSAGCNPDIVTYGIM-------VDILCKAGRVDEAVEVVKEMDDNDC-------RPTSF 271
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y+ L++ Y R+E+A+ + M + G++ D V YN +I FC+ + + + EM
Sbjct: 272 IYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEM 331
Query: 121 DEKRIL---RMEEVVYESLM-QGLSDE----------------DAYSSLMNDYLAQGDME 160
+ I R V+ SL+ QG +D+ D Y+ L+ + + +++
Sbjct: 332 ESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDADTYTMLIKMFCERNEVD 391
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
A + + + ++ T SV INGL K +A +L MI
Sbjct: 392 MALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMI 436
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI A+C + V + +M NG+ +P+ T N ++ G ++A
Sbjct: 307 VYNALIGAFCKANKLKNVHRVLKEMESNGI-------APNSRTCNVIMSSLISQGETDKA 359
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ R M ++ PDA +Y ++I FC E A ++ M K Q
Sbjct: 360 FSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSK--------------Q 404
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +S L+N A+G+ KA IL E+ G +T
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 110/294 (37%), Gaps = 54/294 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ L++A C K + D M G P TY+ L+ G+ + +A
Sbjct: 168 AFNGLLSALCKSRNVRKAQEIFDSM--KGRF------EPDSKTYSILLEGWGKEPNLPKA 219
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G +PD V+Y I++ C+ +A E+ EMD+ +
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI------- 272
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
YS L++ Y + +E A + E+ +G ++ V + I K + +
Sbjct: 273 -------YSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVH 325
Query: 199 EILLSMISNSCL--SKTTHTTYDALIENCSNNE----FKSLVELVKGFRMRGLVSEAARA 252
+L M SN S+T + +LI ++ F+ +++L
Sbjct: 326 RVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC--------------- 370
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HMFSVL 304
+PD Y LI C VD A ++ M FVP H FSVL
Sbjct: 371 ---------EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G +PD TY + ++ C G + + +M N P+
Sbjct: 226 MVSAGCNPDIVTYGIM-------VDILCKAGRVDEAVEVVKEMDDNDC-------RPTSF 271
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y+ L++ Y R+E+A+ + M + G++ D V YN +I FC+ + + + EM
Sbjct: 272 IYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEM 331
Query: 121 DEKRIL---RMEEVVYESLM-QGLSDE----------------DAYSSLMNDYLAQGDME 160
+ I R V+ SL+ QG +D+ D Y+ L+ + + +++
Sbjct: 332 ESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDADTYTMLIKMFCERNEVD 391
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
A + + + ++ T SV INGL K +A +L MI
Sbjct: 392 MALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMI 436
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI A+C + V + +M NG+ +P+ T N ++ G ++A
Sbjct: 307 VYNALIGAFCKANKLKNVHRVLKEMESNGI-------APNSRTCNVIMSSLISQGETDKA 359
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ R M ++ PDA +Y ++I FC E A ++ M K Q
Sbjct: 360 FSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSK--------------Q 404
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +S L+N A+G+ KA IL E+ G +T
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 110/294 (37%), Gaps = 54/294 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ L++A C K + D M G P TY+ L+ G+ + +A
Sbjct: 168 AFNGLLSALCKSRNVRKAQEIFDSM--KGRF------EPDSKTYSILLEGWGKEPNLPKA 219
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G +PD V+Y I++ C+ +A E+ EMD+ +
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI------- 272
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
YS L++ Y + +E A + E+ +G ++ V + I K + +
Sbjct: 273 -------YSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVH 325
Query: 199 EILLSMISNSCL--SKTTHTTYDALIENCSNNE----FKSLVELVKGFRMRGLVSEAARA 252
+L M SN S+T + +LI ++ F+ +++L
Sbjct: 326 RVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC--------------- 370
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HMFSVL 304
+PD Y LI C VD A ++ M FVP H FSVL
Sbjct: 371 ---------EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVL 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G +PD TY + ++ C G + + +M N P+
Sbjct: 226 MVSAGCNPDIVTYGIM-------VDILCKAGRVDEAVEVVKEMDDNDC-------RPTSF 271
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y+ L++ Y R+E+A+ + M + G++ D V YN +I FC+ + + + EM
Sbjct: 272 IYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEM 331
Query: 121 DEKRIL---RMEEVVYESLM-QGLSDE----------------DAYSSLMNDYLAQGDME 160
+ I R V+ SL+ QG +D+ D Y+ L+ + + +++
Sbjct: 332 ESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLCEPDADTYTMLIKMFCERNEVD 391
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMI 205
A + + + ++ T SV INGL K +A +L MI
Sbjct: 392 MALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMI 436
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI A+C + V + +M NG+ +P+ T N ++ G ++A
Sbjct: 307 VYNALIGAFCKANKLKNVHRVLKEMESNGI-------APNSRTCNVIMSSLISQGETDKA 359
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ R M ++ PDA +Y ++I FC E A ++ M K Q
Sbjct: 360 FSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSK--------------Q 404
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ +S L+N A+G+ KA IL E+ G +T
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRIT 446
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y S+I+ Y + +V L +QM + PD YNA+I+ V+EA
Sbjct: 310 SYASIISCYSKSSKLYRVLQLFEQMKKRNITPD-------RKVYNAVIFSLAKNRMVKEA 362
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK-------------RI 125
+ ++ M + ++PDA++YN +I C+ R+ +A E+ M E+ RI
Sbjct: 363 VNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRI 422
Query: 126 LRMEEVVYESL--MQGL---SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
LR++E V+E L M+ L + Y L+ + +++ + + DG + +
Sbjct: 423 LRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSS 482
Query: 181 ESVFINGLSKKARTREAKEILLSM 204
V I+GL + EA + + M
Sbjct: 483 YIVLIHGLFLNCKVEEAYKYYIEM 506
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 40/197 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML RG+SP T F+A+F ++ +V L D+M G +P++
Sbjct: 404 MLERGISPSIRT----FHAFFRILRVK------EEVFELLDKMKELGC-------NPTIE 446
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF---CRIREPGKAYELK 117
TY LI +C +++E I M E G+ D SY ++I G C++ E AY+
Sbjct: 447 TYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEE---AYKYY 503
Query: 118 MEMDEKRILRMEEVVYESLMQG------LSDEDAYSSLMNDYLAQGDMEKAY-----ILD 166
+EM EK L E ES++Q ++D A + L ++ L G ++K+ D
Sbjct: 504 IEMQEKGFL--PEPKTESMLQAWLSGRQVTDSQA-TDLEHNQLEHGGLKKSVKPIQSKFD 560
Query: 167 REIAHDGYLSESVTESV 183
RE +L E T SV
Sbjct: 561 RE---KDFLREPETRSV 574
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 260 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 319
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 320 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 379
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 380 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 437
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 438 S---------TYTLLIHGLYRADRCKWAFDLFEEM 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V Y ++M L+ + + E+A + + G
Sbjct: 280 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKF-------------EEALQVVERMNAVGCR 325
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+++ + I L + R +A + + + ++ T +TY+++I + F +
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNT-STYNSMI-----SMFCYYAQ 379
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ F G++ E ++ G KPD Y+ LI + + +D N
Sbjct: 380 EERAF---GILKEMEKS------GLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y ++I YC F +V +L D+M P+ VT +
Sbjct: 243 SYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERM 302
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILR-GMPEMGLSPDAVSYNIVISGFCRIRE 109
P + +N+LIY GR+++A + + MP+ ++P+ +YN +IS FC +
Sbjct: 303 NAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQ 362
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A+ + EM++ + + + Y L++ + +ND L DM Y + ++
Sbjct: 363 EERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDIL--NDMVNKYHIGLDL 420
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ T ++ I+GL + R + A ++ M
Sbjct: 421 S---------TYTLLIHGLYRADRCKWAFDLFEEM 446
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N LI+G+C + RVEEA ++ M G P +SY+ +I +C+ + + Y+
Sbjct: 203 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYD 262
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
L EM + V Y ++M L+ + + +
Sbjct: 263 LLDEMQAQNC-SPNVVTYTTIMCALAKAEKFEEALQ 297
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 131/306 (42%), Gaps = 30/306 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ R + Y ++Y ++++++ + ++ + +++QM+ +G S ++
Sbjct: 215 LVERFIKSKSFNYRPFKHSYNAILHSFLVLNQYKLIEWVYEQMLLDGGF------SSDIL 268
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA----YEL 116
TYN +IY LG+V++ L +L M G SPD +YNI++ + + GK +L
Sbjct: 269 TYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISK-GDIGKGDLDKEDL 327
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
E ++ + L++ + E+ ++ +++L++ + G ++ E+ +G +
Sbjct: 328 GKEKEQFKALKLLNYMRETGIEPTVLH--FTTLIDGFSRAGKLDACQYFFNEMKKNGCMP 385
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ V +V I G +A+E+ M+S + TY+++I
Sbjct: 386 DVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNV--FTYNSMI-------------- 429
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+G M G EA M P+ VY L+ V A + +M G
Sbjct: 430 -RGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGK 488
Query: 297 VPHMFS 302
H+ S
Sbjct: 489 YAHLLS 494
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 131/306 (42%), Gaps = 30/306 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ R + Y ++Y ++++++ + ++ + +++QM+ +G S ++
Sbjct: 215 LVERFIKSKSFNYRPFKHSYNAILHSFLVLNQYKLIEWVYEQMLLDGGF------SSDIL 268
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA----YEL 116
TYN +IY LG+V++ L +L M G SPD +YNI++ + + GK +L
Sbjct: 269 TYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISK-GDIGKGDLDKEDL 327
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
E ++ + L++ + E+ ++ +++L++ + G ++ E+ +G +
Sbjct: 328 GKEKEQFKALKLLNYMRETGIEPTVLH--FTTLIDGFSRAGKLDACQYFFNEMKKNGCMP 385
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ V +V I G +A+E+ M+S + TY+++I
Sbjct: 386 DVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNV--FTYNSMI-------------- 429
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+G M G EA M P+ VY L+ V A + +M G
Sbjct: 430 -RGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGK 488
Query: 297 VPHMFS 302
H+ S
Sbjct: 489 YAHLLS 494
>Medtr2g103550.2 | PPR containing plant-like protein | HC |
chr2:44583250-44580161 | 20130731
Length = 439
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD TY++L +A++ + +G + L +QM+ GV+P+ L T+N
Sbjct: 245 KGVKPDVVTYTTLISAFYDH-KRWEIG------NGLWNQMVLKGVMPN-------LHTFN 290
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
I + RV +A ++ M G++PD V+ +VI GF R P A + + +K
Sbjct: 291 VRIQFLVTVRRVWDANKLMALMQRNGVTPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDK 350
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
++ +Y++++ L +GD +AY L ++ + T +
Sbjct: 351 G-YKISANIYQTMIHNLCK-------------RGDFSQAYTLCKDSMRKNWFPNVDTIFM 396
Query: 184 FINGLSKKARTREAKEIL 201
+ GL K + +AK I+
Sbjct: 397 LLEGLKKSGKINKAKVIV 414
>Medtr2g103550.1 | PPR containing plant-like protein | HC |
chr2:44583249-44581163 | 20130731
Length = 439
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD TY++L +A++ + +G + L +QM+ GV+P+ L T+N
Sbjct: 245 KGVKPDVVTYTTLISAFYDH-KRWEIG------NGLWNQMVLKGVMPN-------LHTFN 290
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
I + RV +A ++ M G++PD V+ +VI GF R P A + + +K
Sbjct: 291 VRIQFLVTVRRVWDANKLMALMQRNGVTPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDK 350
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
++ +Y++++ L +GD +AY L ++ + T +
Sbjct: 351 G-YKISANIYQTMIHNLCK-------------RGDFSQAYTLCKDSMRKNWFPNVDTIFM 396
Query: 184 FINGLSKKARTREAKEIL 201
+ GL K + +AK I+
Sbjct: 397 LLEGLKKSGKINKAKVIV 414