Miyakogusa Predicted Gene

Lj4g3v0867490.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0867490.3 Non Characterized Hit- tr|E1ZDD1|E1ZDD1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,30.9,0.000000003,seg,NULL; VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN (VPS13),Vacuolar protein sorting-associated
pr,CUFF.48146.3
         (951 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078970.1 | DUF1162 family protein | HC | chr8:33685838-33...  1572   0.0  

>Medtr8g078970.1 | DUF1162 family protein | HC |
            chr8:33685838-33657743 | 20130731
          Length = 3164

 Score = 1572 bits (4071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 770/934 (82%), Positives = 824/934 (88%), Gaps = 4/934 (0%)

Query: 1    MTNLLHSEIDVLLSETGQPKLVEYDKIGKQATISCGSTVDFYANPELIYFTVNLXXXXXX 60
            MTNLLHSEIDVLLSET Q  LV ++KIGKQATISCGST DFYANP +IYFTV L      
Sbjct: 2100 MTNLLHSEIDVLLSETDQLNLVGHEKIGKQATISCGSTADFYANPAVIYFTVTLTSSNSS 2159

Query: 61   XKPVNSGDCVKKLLKQNNDVQHVDIKLDLDGGNFSATLRLYRGNRGILEVVVFTSYSMKN 120
             KPVNS DCVKKLLKQN +VQH+DI LD DGG FSATLRLYRGNRG+LEVVVFTSYS+KN
Sbjct: 2160 SKPVNSRDCVKKLLKQNTEVQHLDINLDFDGGKFSATLRLYRGNRGMLEVVVFTSYSVKN 2219

Query: 121  DTASPIYVLATKRWPLSRVELDNLNSNIPSELGLFLPPKSTRSWFLKSEKVQLKLLEDHT 180
            +T  P+YVLATKRWPLSR+EL+NL SNIPSELGL L PKSTRSWFLKSE+VQL+LLEDHT
Sbjct: 2220 ETDLPVYVLATKRWPLSRIELENLKSNIPSELGLCLLPKSTRSWFLKSERVQLRLLEDHT 2279

Query: 181  SEALLDFGSLSGLTEISFKKEEGSGIKSVTKIGVSIGPSSGEIVVPSQMVTLVPRYVICN 240
            SEA LD GSLSGL EISFKKEEGSGIKSVTK+GVSIGPS GEIVVPSQMVTLVPRYVICN
Sbjct: 2280 SEAPLDLGSLSGLIEISFKKEEGSGIKSVTKLGVSIGPSVGEIVVPSQMVTLVPRYVICN 2339

Query: 241  ESEERIIVRQCYFQDEEAGFVSIDSKQRVPLQLKEGLSKKREFSVFEHFIRKHRFSSDNS 300
            +SE+ I VRQ YFQDE  G +SI+SKQR+ L LKEGL+KKREFSVFE  IRKHR  SDNS
Sbjct: 2340 KSEQSITVRQYYFQDEVEGVISINSKQRMSLPLKEGLTKKREFSVFERLIRKHRIDSDNS 2399

Query: 301  LLYIQIQTNEPGLGWSGPVCIASLGHFFLKFRKETDEVKTLDNKMTQFAAVHVVEEGSTL 360
            LLY+QIQTNE GLGWSGPVC+ASLGHFFLKFRKE     T DNKMTQFAAVHV EEGSTL
Sbjct: 2400 LLYVQIQTNEHGLGWSGPVCLASLGHFFLKFRKEG---TTSDNKMTQFAAVHVAEEGSTL 2456

Query: 361  VLSFYKPPNLSLPYRIENCLHSLSITCYQKDSLVPEVLGPACSADYVWDDLTLPRKLVVR 420
            VLSFYKPPN SLPYRI+NCLHSLSIT YQK SL PEVLGPA SADYVWDDLTLP +LVVR
Sbjct: 2457 VLSFYKPPNSSLPYRIQNCLHSLSITYYQKGSLEPEVLGPAGSADYVWDDLTLPHRLVVR 2516

Query: 421  INDSLQLREIKLDKVQAWRPFYKLGQQGVLAPRLLFDKGSRDQRVSFREPSGMEMEKVGF 480
            INDSLQLREIKLDKV+AW PFYKLGQQ VLA RLL DK SRDQ  SF E  G+EM KVG+
Sbjct: 2517 INDSLQLREIKLDKVRAWTPFYKLGQQRVLATRLLSDKRSRDQNASFSERDGLEMTKVGY 2576

Query: 481  EIYAEGPTRVLRICEISDSFKRQTVHALCAKIQLRVSQFAVHLLEHVTQEEDDNERKDFS 540
            EIYAEGPTRVLRICEISDSFKR TV  LCAK QLRVSQ AVH+LEHVTQE D+NERKDF+
Sbjct: 2577 EIYAEGPTRVLRICEISDSFKRDTVIDLCAKFQLRVSQLAVHILEHVTQE-DENERKDFT 2635

Query: 541  PIVVAKLGNLHMITISNNHQKYNQFSIQYLNFDLKWKGAPFSSMLRGHQLDYSESNDSAX 600
            PIV  KLGNLHMIT+SNNHQKYNQF IQ++N +LKW GAPF+SMLR HQLD+S+ ND   
Sbjct: 2636 PIVAVKLGNLHMITVSNNHQKYNQFIIQHMNLELKWNGAPFASMLRRHQLDFSDPNDCVL 2695

Query: 601  XXXXXXXXXXXXXXQLKYSSIFLQPIDLNIDEETLMKIVSFWRSSLSASESQRYYFDHFE 660
                          Q +YSSIFLQPIDLN+DEETLMK+ SFWR+SLS SESQR YFDHFE
Sbjct: 2696 KVVFVTLTSSSNVKQFRYSSIFLQPIDLNLDEETLMKLASFWRTSLSDSESQRIYFDHFE 2755

Query: 661  VHPIKIIANFIPGEPRSSYSSAQEALRSLIHSVVKVPSIKSRVVELNGVLITHALITMRE 720
            ++PIKIIANFIPGE +S+YSS QEALRSLIHSVVKVPSIK+ VVELNGVLITHALITMRE
Sbjct: 2756 IYPIKIIANFIPGESQSTYSSTQEALRSLIHSVVKVPSIKNMVVELNGVLITHALITMRE 2815

Query: 721  LFIKCAQHYSWYTMRAIYIAKGSTLLPPEFVSIFDDLASSSLDVFFDPSRGLANFPGFTL 780
            LFIKCAQHYSWY MRAIYIAKGS LLPP+FVSIFDDLASSSLDVFFDPS GLAN PG TL
Sbjct: 2816 LFIKCAQHYSWYAMRAIYIAKGSPLLPPDFVSIFDDLASSSLDVFFDPSHGLANLPGLTL 2875

Query: 781  GTFKLISKCIKGKGFSGTKRYFGDLGKTLRSAGSNIAFAAVAEISDSVLKGAEANGFDGL 840
            GTFKLISKCIKG+GFSGTKRYFGDLGKTL+SAGSNIAFAAVAEISDS+L+GAEANGFDGL
Sbjct: 2876 GTFKLISKCIKGEGFSGTKRYFGDLGKTLKSAGSNIAFAAVAEISDSILRGAEANGFDGL 2935

Query: 841  MSGFHQGILKLAMEPSFLGTALMEGGPDRKILLDQSPGVDELYIEGYIQAMLDTVYRQEY 900
            MSGFHQGILKLAMEPS LGTALMEGGPDRKILLD+SPGVDELYIEGYIQAMLDTVYRQEY
Sbjct: 2936 MSGFHQGILKLAMEPSVLGTALMEGGPDRKILLDRSPGVDELYIEGYIQAMLDTVYRQEY 2995

Query: 901  LRVRVIDNQVILKNLPPNHSLINEITNRVKEFLV 934
            LRVRVIDNQVILKNLPPN SLIN+I +RVKEFLV
Sbjct: 2996 LRVRVIDNQVILKNLPPNQSLINDIMDRVKEFLV 3029