Miyakogusa Predicted Gene
- Lj4g3v0867490.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0867490.3 Non Characterized Hit- tr|E1ZDD1|E1ZDD1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,30.9,0.000000003,seg,NULL; VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN (VPS13),Vacuolar protein sorting-associated
pr,CUFF.48146.3
(951 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g078970.1 | DUF1162 family protein | HC | chr8:33685838-33... 1572 0.0
>Medtr8g078970.1 | DUF1162 family protein | HC |
chr8:33685838-33657743 | 20130731
Length = 3164
Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/934 (82%), Positives = 824/934 (88%), Gaps = 4/934 (0%)
Query: 1 MTNLLHSEIDVLLSETGQPKLVEYDKIGKQATISCGSTVDFYANPELIYFTVNLXXXXXX 60
MTNLLHSEIDVLLSET Q LV ++KIGKQATISCGST DFYANP +IYFTV L
Sbjct: 2100 MTNLLHSEIDVLLSETDQLNLVGHEKIGKQATISCGSTADFYANPAVIYFTVTLTSSNSS 2159
Query: 61 XKPVNSGDCVKKLLKQNNDVQHVDIKLDLDGGNFSATLRLYRGNRGILEVVVFTSYSMKN 120
KPVNS DCVKKLLKQN +VQH+DI LD DGG FSATLRLYRGNRG+LEVVVFTSYS+KN
Sbjct: 2160 SKPVNSRDCVKKLLKQNTEVQHLDINLDFDGGKFSATLRLYRGNRGMLEVVVFTSYSVKN 2219
Query: 121 DTASPIYVLATKRWPLSRVELDNLNSNIPSELGLFLPPKSTRSWFLKSEKVQLKLLEDHT 180
+T P+YVLATKRWPLSR+EL+NL SNIPSELGL L PKSTRSWFLKSE+VQL+LLEDHT
Sbjct: 2220 ETDLPVYVLATKRWPLSRIELENLKSNIPSELGLCLLPKSTRSWFLKSERVQLRLLEDHT 2279
Query: 181 SEALLDFGSLSGLTEISFKKEEGSGIKSVTKIGVSIGPSSGEIVVPSQMVTLVPRYVICN 240
SEA LD GSLSGL EISFKKEEGSGIKSVTK+GVSIGPS GEIVVPSQMVTLVPRYVICN
Sbjct: 2280 SEAPLDLGSLSGLIEISFKKEEGSGIKSVTKLGVSIGPSVGEIVVPSQMVTLVPRYVICN 2339
Query: 241 ESEERIIVRQCYFQDEEAGFVSIDSKQRVPLQLKEGLSKKREFSVFEHFIRKHRFSSDNS 300
+SE+ I VRQ YFQDE G +SI+SKQR+ L LKEGL+KKREFSVFE IRKHR SDNS
Sbjct: 2340 KSEQSITVRQYYFQDEVEGVISINSKQRMSLPLKEGLTKKREFSVFERLIRKHRIDSDNS 2399
Query: 301 LLYIQIQTNEPGLGWSGPVCIASLGHFFLKFRKETDEVKTLDNKMTQFAAVHVVEEGSTL 360
LLY+QIQTNE GLGWSGPVC+ASLGHFFLKFRKE T DNKMTQFAAVHV EEGSTL
Sbjct: 2400 LLYVQIQTNEHGLGWSGPVCLASLGHFFLKFRKEG---TTSDNKMTQFAAVHVAEEGSTL 2456
Query: 361 VLSFYKPPNLSLPYRIENCLHSLSITCYQKDSLVPEVLGPACSADYVWDDLTLPRKLVVR 420
VLSFYKPPN SLPYRI+NCLHSLSIT YQK SL PEVLGPA SADYVWDDLTLP +LVVR
Sbjct: 2457 VLSFYKPPNSSLPYRIQNCLHSLSITYYQKGSLEPEVLGPAGSADYVWDDLTLPHRLVVR 2516
Query: 421 INDSLQLREIKLDKVQAWRPFYKLGQQGVLAPRLLFDKGSRDQRVSFREPSGMEMEKVGF 480
INDSLQLREIKLDKV+AW PFYKLGQQ VLA RLL DK SRDQ SF E G+EM KVG+
Sbjct: 2517 INDSLQLREIKLDKVRAWTPFYKLGQQRVLATRLLSDKRSRDQNASFSERDGLEMTKVGY 2576
Query: 481 EIYAEGPTRVLRICEISDSFKRQTVHALCAKIQLRVSQFAVHLLEHVTQEEDDNERKDFS 540
EIYAEGPTRVLRICEISDSFKR TV LCAK QLRVSQ AVH+LEHVTQE D+NERKDF+
Sbjct: 2577 EIYAEGPTRVLRICEISDSFKRDTVIDLCAKFQLRVSQLAVHILEHVTQE-DENERKDFT 2635
Query: 541 PIVVAKLGNLHMITISNNHQKYNQFSIQYLNFDLKWKGAPFSSMLRGHQLDYSESNDSAX 600
PIV KLGNLHMIT+SNNHQKYNQF IQ++N +LKW GAPF+SMLR HQLD+S+ ND
Sbjct: 2636 PIVAVKLGNLHMITVSNNHQKYNQFIIQHMNLELKWNGAPFASMLRRHQLDFSDPNDCVL 2695
Query: 601 XXXXXXXXXXXXXXQLKYSSIFLQPIDLNIDEETLMKIVSFWRSSLSASESQRYYFDHFE 660
Q +YSSIFLQPIDLN+DEETLMK+ SFWR+SLS SESQR YFDHFE
Sbjct: 2696 KVVFVTLTSSSNVKQFRYSSIFLQPIDLNLDEETLMKLASFWRTSLSDSESQRIYFDHFE 2755
Query: 661 VHPIKIIANFIPGEPRSSYSSAQEALRSLIHSVVKVPSIKSRVVELNGVLITHALITMRE 720
++PIKIIANFIPGE +S+YSS QEALRSLIHSVVKVPSIK+ VVELNGVLITHALITMRE
Sbjct: 2756 IYPIKIIANFIPGESQSTYSSTQEALRSLIHSVVKVPSIKNMVVELNGVLITHALITMRE 2815
Query: 721 LFIKCAQHYSWYTMRAIYIAKGSTLLPPEFVSIFDDLASSSLDVFFDPSRGLANFPGFTL 780
LFIKCAQHYSWY MRAIYIAKGS LLPP+FVSIFDDLASSSLDVFFDPS GLAN PG TL
Sbjct: 2816 LFIKCAQHYSWYAMRAIYIAKGSPLLPPDFVSIFDDLASSSLDVFFDPSHGLANLPGLTL 2875
Query: 781 GTFKLISKCIKGKGFSGTKRYFGDLGKTLRSAGSNIAFAAVAEISDSVLKGAEANGFDGL 840
GTFKLISKCIKG+GFSGTKRYFGDLGKTL+SAGSNIAFAAVAEISDS+L+GAEANGFDGL
Sbjct: 2876 GTFKLISKCIKGEGFSGTKRYFGDLGKTLKSAGSNIAFAAVAEISDSILRGAEANGFDGL 2935
Query: 841 MSGFHQGILKLAMEPSFLGTALMEGGPDRKILLDQSPGVDELYIEGYIQAMLDTVYRQEY 900
MSGFHQGILKLAMEPS LGTALMEGGPDRKILLD+SPGVDELYIEGYIQAMLDTVYRQEY
Sbjct: 2936 MSGFHQGILKLAMEPSVLGTALMEGGPDRKILLDRSPGVDELYIEGYIQAMLDTVYRQEY 2995
Query: 901 LRVRVIDNQVILKNLPPNHSLINEITNRVKEFLV 934
LRVRVIDNQVILKNLPPN SLIN+I +RVKEFLV
Sbjct: 2996 LRVRVIDNQVILKNLPPNQSLINDIMDRVKEFLV 3029