Miyakogusa Predicted Gene

Lj4g3v0867490.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0867490.2 Non Characterized Hit- tr|F6I7D8|F6I7D8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,61.06,0,seg,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protein sorting-associated pr,CUFF.48146.2
         (1065 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078970.1 | DUF1162 family protein | HC | chr8:33685838-33...  1737   0.0  

>Medtr8g078970.1 | DUF1162 family protein | HC |
            chr8:33685838-33657743 | 20130731
          Length = 3164

 Score = 1737 bits (4499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 850/1030 (82%), Positives = 911/1030 (88%), Gaps = 4/1030 (0%)

Query: 19   YIKGGKAVRLSGIFDKLNYRVRKALFEKSVKCSFSTAHCTLKSEGVSVSKMHFLIQTIAR 78
            YIKGGKAVRLSGIFDKLNYRVRKALF KSVKCSFST HC L SEG+ V+ MHFLIQTIA+
Sbjct: 2004 YIKGGKAVRLSGIFDKLNYRVRKALFVKSVKCSFSTVHCKLMSEGLCVADMHFLIQTIAK 2063

Query: 79   EVPIASPEKSAAVLKNENSTVSLLEQKEIFLLPTVRMTNLLHSEIDVLLSETGQPKLVEY 138
            +VP+  PEKSAAVLKNE+S VSLLEQKEI+LLPTVRMTNLLHSEIDVLLSET Q  LV +
Sbjct: 2064 DVPVVQPEKSAAVLKNESSKVSLLEQKEIYLLPTVRMTNLLHSEIDVLLSETDQLNLVGH 2123

Query: 139  DKIGKQATISCGSTVDFYANPELIYFTVNLXXXXXXXKPVNSGDCVKKLLKQNNDVQHVD 198
            +KIGKQATISCGST DFYANP +IYFTV L       KPVNS DCVKKLLKQN +VQH+D
Sbjct: 2124 EKIGKQATISCGSTADFYANPAVIYFTVTLTSSNSSSKPVNSRDCVKKLLKQNTEVQHLD 2183

Query: 199  IKLDLDGGNFSATLRLYRGNRGILEVVVFTSYSMKNDTASPIYVLATKRWPLSRVELDNL 258
            I LD DGG FSATLRLYRGNRG+LEVVVFTSYS+KN+T  P+YVLATKRWPLSR+EL+NL
Sbjct: 2184 INLDFDGGKFSATLRLYRGNRGMLEVVVFTSYSVKNETDLPVYVLATKRWPLSRIELENL 2243

Query: 259  NSNIPSELGLFLPPKSTRSWFLKSEKVQLKLLEDHTSEALLDFGSLSGLTEISFKKEEGS 318
             SNIPSELGL L PKSTRSWFLKSE+VQL+LLEDHTSEA LD GSLSGL EISFKKEEGS
Sbjct: 2244 KSNIPSELGLCLLPKSTRSWFLKSERVQLRLLEDHTSEAPLDLGSLSGLIEISFKKEEGS 2303

Query: 319  GIKSVTKIGVSIGPSSGEIVVPSQMVTLVPRYVICNESEERIIVRQCYFQDEEAGFVSID 378
            GIKSVTK+GVSIGPS GEIVVPSQMVTLVPRYVICN+SE+ I VRQ YFQDE  G +SI+
Sbjct: 2304 GIKSVTKLGVSIGPSVGEIVVPSQMVTLVPRYVICNKSEQSITVRQYYFQDEVEGVISIN 2363

Query: 379  SKQRVPLQLKEGLSKKREFSVFEHFIRKHRFSSDNSLLYIQIQTNEPGLGWSGPVCIASL 438
            SKQR+ L LKEGL+KKREFSVFE  IRKHR  SDNSLLY+QIQTNE GLGWSGPVC+ASL
Sbjct: 2364 SKQRMSLPLKEGLTKKREFSVFERLIRKHRIDSDNSLLYVQIQTNEHGLGWSGPVCLASL 2423

Query: 439  GHFFLKFRKETDEVKTLDNKMTQFAAVHVVEEGSTLVLSFYKPPNLSLPYRIENCLHSLS 498
            GHFFLKFRKE     T DNKMTQFAAVHV EEGSTLVLSFYKPPN SLPYRI+NCLHSLS
Sbjct: 2424 GHFFLKFRKEG---TTSDNKMTQFAAVHVAEEGSTLVLSFYKPPNSSLPYRIQNCLHSLS 2480

Query: 499  ITCYQKDSLVPEVLGPACSADYVWDDLTLPRKLVVRINDSLQLREIKLDKVQAWRPFYKL 558
            IT YQK SL PEVLGPA SADYVWDDLTLP +LVVRINDSLQLREIKLDKV+AW PFYKL
Sbjct: 2481 ITYYQKGSLEPEVLGPAGSADYVWDDLTLPHRLVVRINDSLQLREIKLDKVRAWTPFYKL 2540

Query: 559  GQQGVLAPRLLFDKGSRDQRVSFREPSGMEMEKVGFEIYAEGPTRVLRICEISDSFKRQT 618
            GQQ VLA RLL DK SRDQ  SF E  G+EM KVG+EIYAEGPTRVLRICEISDSFKR T
Sbjct: 2541 GQQRVLATRLLSDKRSRDQNASFSERDGLEMTKVGYEIYAEGPTRVLRICEISDSFKRDT 2600

Query: 619  VHALCAKIQLRVSQFAVHLLEHVTQEEDDNERKDFSPIVVAKLGNLHMITISNNHQKYNQ 678
            V  LCAK QLRVSQ AVH+LEHVTQ ED+NERKDF+PIV  KLGNLHMIT+SNNHQKYNQ
Sbjct: 2601 VIDLCAKFQLRVSQLAVHILEHVTQ-EDENERKDFTPIVAVKLGNLHMITVSNNHQKYNQ 2659

Query: 679  FSIQYLNFDLKWKGAPFSSMLRGHQLDYSESNDSAXXXXXXXXXXXXXXXQLKYSSIFLQ 738
            F IQ++N +LKW GAPF+SMLR HQLD+S+ ND                 Q +YSSIFLQ
Sbjct: 2660 FIIQHMNLELKWNGAPFASMLRRHQLDFSDPNDCVLKVVFVTLTSSSNVKQFRYSSIFLQ 2719

Query: 739  PIDLNIDEETLMKIVSFWRSSLSASESQRYYFDHFEVHPIKIIANFIPGEPRSSYSSAQE 798
            PIDLN+DEETLMK+ SFWR+SLS SESQR YFDHFE++PIKIIANFIPGE +S+YSS QE
Sbjct: 2720 PIDLNLDEETLMKLASFWRTSLSDSESQRIYFDHFEIYPIKIIANFIPGESQSTYSSTQE 2779

Query: 799  ALRSLIHSVVKVPSIKSRVVELNGVLITHALITMRELFIKCAQHYSWYTMRAIYIAKGST 858
            ALRSLIHSVVKVPSIK+ VVELNGVLITHALITMRELFIKCAQHYSWY MRAIYIAKGS 
Sbjct: 2780 ALRSLIHSVVKVPSIKNMVVELNGVLITHALITMRELFIKCAQHYSWYAMRAIYIAKGSP 2839

Query: 859  LLPPEFVSIFDDLASSSLDVFFDPSRGLANFPGFTLGTFKLISKCIKGKGFSGTKRYFGD 918
            LLPP+FVSIFDDLASSSLDVFFDPS GLAN PG TLGTFKLISKCIKG+GFSGTKRYFGD
Sbjct: 2840 LLPPDFVSIFDDLASSSLDVFFDPSHGLANLPGLTLGTFKLISKCIKGEGFSGTKRYFGD 2899

Query: 919  LGKTLRSAGSNIAFAAVAEISDSVLKGAEANGFDGLMSGFHQGILKLAMEPSFLGTALME 978
            LGKTL+SAGSNIAFAAVAEISDS+L+GAEANGFDGLMSGFHQGILKLAMEPS LGTALME
Sbjct: 2900 LGKTLKSAGSNIAFAAVAEISDSILRGAEANGFDGLMSGFHQGILKLAMEPSVLGTALME 2959

Query: 979  GGPDRKILLDQSPGVDELYIEGYIQAMLDTVYRQEYLRVRVIDNQVILKNLPPNHSLINE 1038
            GGPDRKILLD+SPGVDELYIEGYIQAMLDTVYRQEYLRVRVIDNQVILKNLPPN SLIN+
Sbjct: 2960 GGPDRKILLDRSPGVDELYIEGYIQAMLDTVYRQEYLRVRVIDNQVILKNLPPNQSLIND 3019

Query: 1039 ITNRVKEFLV 1048
            I +RVKEFLV
Sbjct: 3020 IMDRVKEFLV 3029