Miyakogusa Predicted Gene

Lj4g3v0843260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0843260.1 tr|Q54J54|Q54J54_DICDI DUF1649 family protein
OS=Dictyostelium discoideum GN=DDB_0187874 PE=4
SV=1,30,2e-18,DUF1649,Autophagy-related protein 1010; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Autophagy-related ,CUFF.48102.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079240.1 | autophagy-like protein | HC | chr8:33771318-33...   381   e-106
Medtr8g079240.2 | autophagy-like protein | HC | chr8:33771318-33...   327   4e-90

>Medtr8g079240.1 | autophagy-like protein | HC |
           chr8:33771318-33765931 | 20130731
          Length = 218

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/218 (87%), Positives = 197/218 (90%)

Query: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXX 60
           MNCEVC LKELE+EHFEIREILRCILHT++FHRALGLVRPKDVD+ELFDVTYVQCG    
Sbjct: 1   MNCEVCHLKELELEHFEIREILRCILHTIIFHRALGLVRPKDVDLELFDVTYVQCGEVEV 60

Query: 61  XXXXXXXXXQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQ 120
                    QFICWVEKHPNKKSQICLSFYEVKNKQ SWFSN+IERLYWEQWYINLNVAQ
Sbjct: 61  ENKIEEKIEQFICWVEKHPNKKSQICLSFYEVKNKQASWFSNRIERLYWEQWYINLNVAQ 120

Query: 121 HQKAHSSKSHLSKVVDPGEGALEDRNARSATLEASLREVLFQIIKFVNEKKDHVPPIPNL 180
           H K+HSSKSH SK VDPG+G LEDRNARSA LE SLREVLFQIIKFVNEKKDHVPPIPNL
Sbjct: 121 HLKSHSSKSHHSKFVDPGDGTLEDRNARSAALEVSLREVLFQIIKFVNEKKDHVPPIPNL 180

Query: 181 EGAISFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS 218
           EGAISFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS
Sbjct: 181 EGAISFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS 218


>Medtr8g079240.2 | autophagy-like protein | HC |
           chr8:33771318-33765931 | 20130731
          Length = 194

 Score =  327 bits (839), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 165/193 (85%), Positives = 172/193 (89%)

Query: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXX 60
           MNCEVC LKELE+EHFEIREILRCILHT++FHRALGLVRPKDVD+ELFDVTYVQCG    
Sbjct: 1   MNCEVCHLKELELEHFEIREILRCILHTIIFHRALGLVRPKDVDLELFDVTYVQCGEVEV 60

Query: 61  XXXXXXXXXQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQ 120
                    QFICWVEKHPNKKSQICLSFYEVKNKQ SWFSN+IERLYWEQWYINLNVAQ
Sbjct: 61  ENKIEEKIEQFICWVEKHPNKKSQICLSFYEVKNKQASWFSNRIERLYWEQWYINLNVAQ 120

Query: 121 HQKAHSSKSHLSKVVDPGEGALEDRNARSATLEASLREVLFQIIKFVNEKKDHVPPIPNL 180
           H K+HSSKSH SK VDPG+G LEDRNARSA LE SLREVLFQIIKFVNEKKDHVPPIPNL
Sbjct: 121 HLKSHSSKSHHSKFVDPGDGTLEDRNARSAALEVSLREVLFQIIKFVNEKKDHVPPIPNL 180

Query: 181 EGAISFPYEITIP 193
           EGAISFPYEITIP
Sbjct: 181 EGAISFPYEITIP 193