Miyakogusa Predicted Gene
- Lj4g3v0816700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0816700.1 Non Characterized Hit- tr|J3N9T9|J3N9T9_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,29.48,2e-18,Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat, cysteine-containing subtype;
no de,CUFF.48072.1
(530 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g094932.1 | F-box protein SKIP2 | HC | chr4:39315059-39312... 696 0.0
Medtr1g018790.1 | F-box SKIP2-like protein | HC | chr1:5512021-5... 508 e-144
Medtr2g021030.1 | F-box/LRR protein | HC | chr2:7104633-7097070 ... 105 1e-22
Medtr2g021030.2 | F-box/LRR protein | HC | chr2:7104633-7097070 ... 100 3e-21
Medtr4g013255.1 | F-box/LRR protein | HC | chr4:3659491-3663944 ... 77 5e-14
Medtr7g112570.3 | F-box/LRR protein | HC | chr7:46304993-4630923... 70 5e-12
Medtr1g012520.1 | EIN3-binding F-box-like protein | HC | chr1:25... 70 5e-12
Medtr7g112570.2 | F-box/LRR protein | HC | chr7:46304993-4630999... 70 6e-12
Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-4631002... 70 7e-12
Medtr8g028140.1 | F-box/LRR protein | HC | chr8:10472875-1047168... 67 5e-11
Medtr8g028140.2 | F-box/LRR protein | HC | chr8:10472875-1047168... 67 5e-11
Medtr4g036815.1 | F-box-like protein | HC | chr4:13456407-134592... 65 2e-10
Medtr4g091290.1 | transport inhibitor response 1 protein | HC | ... 61 2e-09
Medtr5g088767.1 | hypothetical protein | LC | chr5:38551781-3855... 60 4e-09
Medtr4g114640.1 | EIN3-binding F-box-like protein | HC | chr4:47... 59 1e-08
Medtr1g114610.1 | F-box/LRR protein | HC | chr1:51737951-5174122... 59 1e-08
Medtr3g107280.1 | EIN3-binding F-box-like protein | HC | chr3:49... 58 3e-08
Medtr1g088950.1 | transport inhibitor response-like protein | HC... 57 3e-08
Medtr3g408430.1 | F-box plant-like protein | HC | chr3:1495741-1... 53 9e-07
Medtr1g023530.1 | F-box/LRR protein, putative | LC | chr1:755565... 52 2e-06
Medtr4g130630.1 | F-box/LRR protein | HC | chr4:54430735-5442945... 52 2e-06
Medtr3g088895.2 | F-box SKP2A-like protein | HC | chr3:40692425-... 51 2e-06
Medtr3g088895.1 | F-box SKP2A-like protein | HC | chr3:40692425-... 51 2e-06
>Medtr4g094932.1 | F-box protein SKIP2 | HC | chr4:39315059-39312725
| 20130731
Length = 536
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/544 (65%), Positives = 408/544 (75%), Gaps = 22/544 (4%)
Query: 1 MGQSPSTPAPSP----DHHRRDIFTTIDADFPNDSLIR--DYTAEIPDECLAAIFHLLTT 54
MGQSPST PSP + R +D I +Y+ EIPDECLA I H L
Sbjct: 1 MGQSPSTAVPSPSLDVNRFRYGDGNGYGNGVSSDDFINGVNYSEEIPDECLAGILHFLDA 60
Query: 55 TDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSRFDSVTKLSLRCTRRATSI 114
DRK CS VC+RW RV+GE+R+RLSLNAEA L+D +PSLF+R+DSVTKL+LRC +++TSI
Sbjct: 61 GDRKSCSVVCKRWFRVEGESRQRLSLNAEAKLVDIVPSLFNRYDSVTKLALRCNKKSTSI 120
Query: 115 GDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAV 174
DD LILISLRCK L RLKLR CRE+TEIGM+G ARNC K LKKLSV SC+FG KG+ AV
Sbjct: 121 NDDALILISLRCKNLTRLKLRACREVTEIGMLGLARNC-KNLKKLSVVSCLFGVKGIRAV 179
Query: 175 IEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGV-------XXXXXXXXXXXXVNGHSFA 227
+++ VLEELSVKRLRGV+ V V+ EGV VNGHSFA
Sbjct: 180 VDNSNVLEELSVKRLRGVN-----DVNEVNEEGVESGCGNGSSSLKSICLKELVNGHSFA 234
Query: 228 PLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQVSDVGLAGVSKCFNLE 287
PLIIGS+KLQTLKLIRC+GDWD+ L TVG++NSGLVEIHLEKVQVSDVGL G+SKC LE
Sbjct: 235 PLIIGSRKLQTLKLIRCIGDWDSMLGTVGKMNSGLVEIHLEKVQVSDVGLVGISKCLKLE 294
Query: 288 TLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIA 347
TLHLVKTPECSD GL +AERC+ML+KLHIDGWR NRIGD+GL+SVA+NCPNLQELVLIA
Sbjct: 295 TLHLVKTPECSDHGLVVIAERCRMLKKLHIDGWRTNRIGDEGLVSVARNCPNLQELVLIA 354
Query: 348 MYPTSLSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGCPVSNAGIA 407
MYPTSLSL IAS C GLERFALCGIGTV DADIEC A+KC ALKK+CIKGCPV+N GIA
Sbjct: 355 MYPTSLSLGAIASCCLGLERFALCGIGTVTDADIECIASKCVALKKLCIKGCPVTNVGIA 414
Query: 408 AFASGCPNXXXXXXXXXXXXTGEIVEWLREKRSSLAFNFDYSEVEPLDGNGSDGGARETT 467
AFASGCPN TGE WLR KRSSLA NFD+S+VE +DG+GSD G +ETT
Sbjct: 415 AFASGCPNLVKLKVRKCVKVTGEAAGWLRLKRSSLAINFDHSQVEAMDGSGSDVGVQETT 474
Query: 468 MAFPPMDTQVNLADDAPXXXXXXXXXRVSMFRTKFGFFVGRNFVPCAFRRWANI-DSIPS 526
MAF DT+V L D+ R+SMFRTKFGF VGRNFVPCAFRRWAN+ D+I
Sbjct: 475 MAFLQNDTEVTLIDEP--SSSSNNNNRLSMFRTKFGFLVGRNFVPCAFRRWANVDDTIDD 532
Query: 527 SSFS 530
SSFS
Sbjct: 533 SSFS 536
>Medtr1g018790.1 | F-box SKIP2-like protein | HC |
chr1:5512021-5514514 | 20130731
Length = 547
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/510 (51%), Positives = 333/510 (65%), Gaps = 21/510 (4%)
Query: 18 DIFTTIDADFPNDSLIRDYTAEIPDECLAAIFHLLTTTDRKICSAVCRRWLRVDGENRRR 77
D+ +D D + DY +++PDECLA +F L +DR CS VCRRWL V+G++R+R
Sbjct: 42 DVADPVDGDGNDGIGNSDYISDLPDECLAIVFQSLNPSDRNQCSLVCRRWLHVEGQSRQR 101
Query: 78 LSLNAEASLLDAIPSLFSRFDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGC 137
LSLNA+ LL IPSLF+RFDSVTKL+L+C RR+ SI D+ L++IS RC L RLKLR C
Sbjct: 102 LSLNAKLDLLPVIPSLFNRFDSVTKLALKCDRRSVSIRDEALVIISERCPNLTRLKLRAC 161
Query: 138 REITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAVIEHCTVLEELSVKRLRGVDGDG- 196
RE+T+ GM FA+NC K L+KLS GSC FG+KG+ AV+E+C LEELSVKRLRG+
Sbjct: 162 RELTDAGMEAFAKNC-KGLRKLSCGSCTFGSKGMNAVLENCAALEELSVKRLRGIAETAV 220
Query: 197 GESV-PGVSIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTV 255
E + PGV+ + NG F LI+G+K L+TLKL RC GDWD + +
Sbjct: 221 AEPIGPGVAAASLKTICLKEL----YNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFTLM 276
Query: 256 G-RVNSGLVEIHLEKVQVSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRK 314
RV S +VE+H E++Q+SD+GL +S C NLE LHLVKTPEC+D GL +AERCK+LRK
Sbjct: 277 AERVASMIVEVHFERLQISDIGLQAISNCSNLEILHLVKTPECTDMGLVAIAERCKLLRK 336
Query: 315 LHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIG 374
LHIDGW+ NRIGD+GLI+VAK CPNLQELVLI + PT +SL +ASNC LER ALC
Sbjct: 337 LHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTRVSLEMLASNCPNLERLALCASD 396
Query: 375 TVGDADIECFAAKCGALKKMCIKGCPVSNAGIAAFASGCPNXXXXXXXXXXXXTGEIVEW 434
TVGD +I C AAKC ALKK+CIK CPVS+ G+ A A+GCPN T E +W
Sbjct: 397 TVGDPEISCIAAKCLALKKLCIKSCPVSDLGMEALANGCPNLVKVKVKKCKGVTPEGGDW 456
Query: 435 LREKRSSLAFNFDYSEVEPLDGNGSDGGARETTMAFPPM-----DTQVNLADDAPXXXXX 489
LR R S+A N D E E D + SDGGA++ + FP M T N+A +
Sbjct: 457 LRHTRVSVAVNLDAVEAELQDASASDGGAQDNGIEFPSMPGSAASTSANIASRS------ 510
Query: 490 XXXXRVSMFRTKFGFFVGRNFVPCAFRRWA 519
R S F+ + G GR V RRW+
Sbjct: 511 --TVRSSSFKQRLGLLSGRKIVASTLRRWS 538
>Medtr2g021030.1 | F-box/LRR protein | HC | chr2:7104633-7097070 |
20130731
Length = 610
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 182/445 (40%), Gaps = 73/445 (16%)
Query: 40 IPDECLAAIFHLLTTT-DRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSRFD 98
+PDE + IF L + R S VC RWLR++ R + + A S + L SRF
Sbjct: 11 LPDELIVEIFRRLDSKPTRDAASLVCNRWLRLERLTRSSIRIGATGSPDLFVQLLASRFF 70
Query: 99 SVT----------KLSLRCTRR-------------------------------ATSIGDD 117
++T L ++ RR + + D+
Sbjct: 71 NITAVHIDERLSISLPVQLGRRRENSSPSSSLKLHYVNKRIGSSSSSEENEFDSLCLSDN 130
Query: 118 GLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAVIEH 177
GLI ++ LE+LKL C +T G+ A C +LK L + C G +G+ AV +
Sbjct: 131 GLIALADGFPKLEKLKLIWCSNVTSFGLSSLASKCA-SLKSLDLQGCYVGDQGLAAVGQR 189
Query: 178 CTVLEELSVKRLRGVDGDG--------GES-----------VPGVSIEGVX----XXXXX 214
C LE+L+++ G+ G G+S + +S+E V
Sbjct: 190 CKQLEDLNLRFCEGLTDTGLVELALGVGKSLKSLGVAACAKITDISMEAVASHCGSLETL 249
Query: 215 XXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ-VS 273
V+ + G L++LKL +C+ D L VG L + L Q +
Sbjct: 250 SLDSEFVHNQGVLAVAKGCPHLKSLKL-QCINLTDDALKAVGVSCLSLELLALYSFQRFT 308
Query: 274 DVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLIS 332
D GL + C L+ L L SD GL +A CK L L ++G + IG GL S
Sbjct: 309 DKGLRAIGNGCKKLKNLTLSDCYFLSDKGLEAIATGCKELTHLEVNG--CHNIGTLGLDS 366
Query: 333 VAKNCPNLQELVLIAMYPT-SLSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGAL 391
V K+C +L EL L+ L L ++ CQ L+ L ++GD + A C L
Sbjct: 367 VGKSCLHLSELALLYCQRIGDLGLLQVGKGCQFLQALHLVDCSSIGDEAMCGIATGCRNL 426
Query: 392 KKMCIKGC-PVSNAGIAAFASGCPN 415
KK+ I+ C + N GI A C +
Sbjct: 427 KKLHIRRCYEIGNKGIIAVGENCKS 451
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 161/433 (37%), Gaps = 117/433 (27%)
Query: 90 IPSLFSRFDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFA 149
+ SL S+ S+ L L+ +GD GL + RCK LE L LR C +T+ G+V A
Sbjct: 158 LSSLASKCASLKSLDLQ----GCYVGDQGLAAVGQRCKQLEDLNLRFCEGLTDTGLVELA 213
Query: 150 RNCGKTLKKLSVGSC--------------------------MFGAKGVYAVIEHCTVLEE 183
GK+LK L V +C +GV AV + C L+
Sbjct: 214 LGVGKSLKSLGVAACAKITDISMEAVASHCGSLETLSLDSEFVHNQGVLAVAKGCPHLKS 273
Query: 184 LSVKRLRGVDGDGGESVPGVSIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIR 243
L ++ + D +++ V + + + G KKL+ L L
Sbjct: 274 LKLQCINLTD----DALKAVGVSCLSLELLALYSFQRFTDKGLRAIGNGCKKLKNLTLSD 329
Query: 244 CLGDWDATLS---------------------TVGRVNSGLVEIHLEKV------QVSDVG 276
C D L T+G + G +HL ++ ++ D+G
Sbjct: 330 CYFLSDKGLEAIATGCKELTHLEVNGCHNIGTLGLDSVGKSCLHLSELALLYCQRIGDLG 389
Query: 277 LAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAK 335
L V K C L+ LHLV D + G+A C+ L+KLHI R IG+ G+I+V +
Sbjct: 390 LLQVGKGCQFLQALHLVDCSSIGDEAMCGIATGCRNLKKLHIR--RCYEIGNKGIIAVGE 447
Query: 336 NCPNLQELV------------------------------------LIAMYPTS------- 352
NC +L +L LIA+ S
Sbjct: 448 NCKSLTDLSIRFCDRVGDGALIAIAEGCSLHYLNVSGCHQIGDVGLIAIARGSPQLCYLD 507
Query: 353 ---------LSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGC-PVS 402
+++AE+ NC L+ L + D + C L+ + C ++
Sbjct: 508 VSVLQNLGDMAMAELGENCSLLKEIVLSHCRQISDVGLAHLVKSCTMLESCHMVYCSSIT 567
Query: 403 NAGIAAFASGCPN 415
+AG+A S CPN
Sbjct: 568 SAGVATVVSSCPN 580
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 12/234 (5%)
Query: 97 FDSVTKLSLRCTRRA----TSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNC 152
DSV K L + A IGD GL+ + C+ L+ L L C I + M G A C
Sbjct: 364 LDSVGKSCLHLSELALLYCQRIGDLGLLQVGKGCQFLQALHLVDCSSIGDEAMCGIATGC 423
Query: 153 GKTLKKLSVGSCM-FGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXX 211
+ LKKL + C G KG+ AV E+C L +LS+ R D G ++ ++ EG
Sbjct: 424 -RNLKKLHIRRCYEIGNKGIIAVGENCKSLTDLSI---RFCDRVGDGALIAIA-EGCSLH 478
Query: 212 XXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKV- 270
+ + GS +L L + D ++ +G S L EI L
Sbjct: 479 YLNVSGCHQIGDVGLIAIARGSPQLCYLDVSVLQNLGDMAMAELGENCSLLKEIVLSHCR 538
Query: 271 QVSDVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRIN 323
Q+SDVGLA + K C LE+ H+V + +G++ V C ++K+ ++ W+++
Sbjct: 539 QISDVGLAHLVKSCTMLESCHMVYCSSITSAGVATVVSSCPNIKKVLVEKWKVS 592
>Medtr2g021030.2 | F-box/LRR protein | HC | chr2:7104633-7097070 |
20130731
Length = 458
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 175/428 (40%), Gaps = 72/428 (16%)
Query: 40 IPDECLAAIFHLLTTT-DRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSRFD 98
+PDE + IF L + R S VC RWLR++ R + + A S + L SRF
Sbjct: 11 LPDELIVEIFRRLDSKPTRDAASLVCNRWLRLERLTRSSIRIGATGSPDLFVQLLASRFF 70
Query: 99 SVT----------KLSLRCTRR-------------------------------ATSIGDD 117
++T L ++ RR + + D+
Sbjct: 71 NITAVHIDERLSISLPVQLGRRRENSSPSSSLKLHYVNKRIGSSSSSEENEFDSLCLSDN 130
Query: 118 GLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAVIEH 177
GLI ++ LE+LKL C +T G+ A C +LK L + C G +G+ AV +
Sbjct: 131 GLIALADGFPKLEKLKLIWCSNVTSFGLSSLASKCA-SLKSLDLQGCYVGDQGLAAVGQR 189
Query: 178 CTVLEELSVKRLRGVDGDG--------GES-----------VPGVSIEGVXX----XXXX 214
C LE+L+++ G+ G G+S + +S+E V
Sbjct: 190 CKQLEDLNLRFCEGLTDTGLVELALGVGKSLKSLGVAACAKITDISMEAVASHCGSLETL 249
Query: 215 XXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ-VS 273
V+ + G L++LKL +C+ D L VG L + L Q +
Sbjct: 250 SLDSEFVHNQGVLAVAKGCPHLKSLKL-QCINLTDDALKAVGVSCLSLELLALYSFQRFT 308
Query: 274 DVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLIS 332
D GL + C L+ L L SD GL +A CK L L ++G + IG GL S
Sbjct: 309 DKGLRAIGNGCKKLKNLTLSDCYFLSDKGLEAIATGCKELTHLEVNG--CHNIGTLGLDS 366
Query: 333 VAKNCPNLQELVLIAMYPT-SLSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGAL 391
V K+C +L EL L+ L L ++ CQ L+ L ++GD + A C L
Sbjct: 367 VGKSCLHLSELALLYCQRIGDLGLLQVGKGCQFLQALHLVDCSSIGDEAMCGIATGCRNL 426
Query: 392 KKMCIKGC 399
KK+ I+ C
Sbjct: 427 KKLHIRRC 434
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 232 GSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQVSDVGLAGV-SKCFNLETLH 290
G KL+ LKLI C LS++ + L + L+ V D GLA V +C LE L+
Sbjct: 138 GFPKLEKLKLIWCSNVTSFGLSSLASKCASLKSLDLQGCYVGDQGLAAVGQRCKQLEDLN 197
Query: 291 LVKTPECSDSGL---------------------------SGVAERCKMLRKLHIDGWRIN 323
L +D+GL VA C L L +D ++
Sbjct: 198 LRFCEGLTDTGLVELALGVGKSLKSLGVAACAKITDISMEAVASHCGSLETLSLDSEFVH 257
Query: 324 RIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGDADIEC 383
+ G+++VAK CP+L+ L L + T +L + +C LE AL D +
Sbjct: 258 ---NQGVLAVAKGCPHLKSLKLQCINLTDDALKAVGVSCLSLELLALYSFQRFTDKGLRA 314
Query: 384 FAAKCGALKKMCIKGCP-VSNAGIAAFASGCP 414
C LK + + C +S+ G+ A A+GC
Sbjct: 315 IGNGCKKLKNLTLSDCYFLSDKGLEAIATGCK 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 272 VSDVGLAGVSKCF-NLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGL 330
+SD GL ++ F LE L L+ + GLS +A +C L+ L + G + GD GL
Sbjct: 127 LSDNGLIALADGFPKLEKLKLIWCSNVTSFGLSSLASKCASLKSLDLQGCYV---GDQGL 183
Query: 331 ISVAKNCPNLQELVL-IAMYPTSLSLAEIASNC-QGLERFALCGIGTVGDADIECFAAKC 388
+V + C L++L L T L E+A + L+ + + D +E A+ C
Sbjct: 184 AAVGQRCKQLEDLNLRFCEGLTDTGLVELALGVGKSLKSLGVAACAKITDISMEAVASHC 243
Query: 389 GALKKMCIKGCPVSNAGIAAFASGCPN 415
G+L+ + + V N G+ A A GCP+
Sbjct: 244 GSLETLSLDSEFVHNQGVLAVAKGCPH 270
>Medtr4g013255.1 | F-box/LRR protein | HC | chr4:3659491-3663944 |
20130731
Length = 669
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 99 SVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKK 158
S+ +LSL + + + DD L + + K L +L + CR+IT++ + A C ++L
Sbjct: 334 SLRELSLS---KCSGVTDDALSFVVSKHKDLRKLDITCCRKITDVSIASIANAC-RSLTS 389
Query: 159 LSVGSCMFGAKGVYAVI-EHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXXXXXX 217
L + SC + Y +I + C LEEL + +D +G ES+ S
Sbjct: 390 LKMESCTLVSSEAYILIGQKCHYLEELDLTD-NEIDDEGLESISRCS----RLSSLKLGI 444
Query: 218 XXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEK-VQVSDVG 276
+ A + + KL+ L L RC G D +S + L I+ ++D
Sbjct: 445 CLNITDKGVANVGMCCSKLKELDLYRCTGVTDLGISAIASGCPSLQMINAAYCTSITDRA 504
Query: 277 LAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKN 336
L +SKC NL+TL + + GL+ +A CK L +L D + I D G++ +A
Sbjct: 505 LFSLSKCVNLQTLEIRGCFLVTSFGLTCIAMNCKQLSRL--DLKKCYNIDDSGMVPLAHF 562
Query: 337 CPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKK 393
NL+++ L T + L +A L+ F L + V + CG L K
Sbjct: 563 SQNLRQINLSYTSVTDVGLLSLAG-ISCLQNFTLLHLQGVAPQGLAAALLACGGLTK 618
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 36/331 (10%)
Query: 114 IGDDGLI--LISLRCKGLERLKLRGCREITEIGMVGFARNCGK----------------- 154
IGDD L + CK L++L + GC+ I+ IG+ G
Sbjct: 242 IGDDSLNNEVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGSVEQLILADGSPVTLALV 301
Query: 155 -TLKKLS------VGSCMFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEG 207
+L KLS + C + G+ A+ C L ELS+ + GV D ++ V +
Sbjct: 302 DSLNKLSMLQSIILDGCNITSDGLKAIGNLCISLRELSLSKCSGVTDD---ALSFVVSKH 358
Query: 208 VXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHL 267
+ S A + + L +LK+ C +G+ L E+ L
Sbjct: 359 KDLRKLDITCCRKITDVSIASIANACRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDL 418
Query: 268 EKVQVSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGD 327
++ D GL +S+C L +L L +D G++ V C L++L D +R + D
Sbjct: 419 TDNEIDDEGLESISRCSRLSSLKLGICLNITDKGVANVGMCCSKLKEL--DLYRCTGVTD 476
Query: 328 DGLISVAKNCPNLQELVLIAMYPTSLSLAEI--ASNCQGLERFALCGIGTVGDADIECFA 385
G+ ++A CP+LQ ++ A Y TS++ + S C L+ + G V + C A
Sbjct: 477 LGISAIASGCPSLQ--MINAAYCTSITDRALFSLSKCVNLQTLEIRGCFLVTSFGLTCIA 534
Query: 386 AKCGALKKMCIKGC-PVSNAGIAAFASGCPN 415
C L ++ +K C + ++G+ A N
Sbjct: 535 MNCKQLSRLDLKKCYNIDDSGMVPLAHFSQN 565
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 152/380 (40%), Gaps = 58/380 (15%)
Query: 74 NRRRLSLNAEASLLDAIPSLFSRFDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLK 133
N L L+ L DA +R ++ +L L R + D G+ I++ CK L+ +
Sbjct: 129 NLVELDLSNATELRDAAMVGVARAVNLERLWLN---RCKLVTDMGIGCIAVGCKKLKLIS 185
Query: 134 LRGCREITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAV--IEHCTVLEELSVKRLRG 191
L+ C I ++G+ A C K L L + K + ++ ++H LE+L ++ G
Sbjct: 186 LKWCVGIADLGVDLLAIKC-KELCTLDLSYLPITEKCLSSIFKLQH---LEDLVLEGCFG 241
Query: 192 VDGD---------GGESVPGVSIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLI 242
+ D G +++ + I G S LI+ TL L+
Sbjct: 242 IGDDSLNNEVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGSVEQLILADGSPVTLALV 301
Query: 243 RCLGDWDATLSTVGRVNSGLVEIHLEKVQVSDVGLAGVSK-CFNLETLHLVKTPECSDSG 301
L S L I L+ ++ GL + C +L L L K +D
Sbjct: 302 DSLNKL-----------SMLQSIILDGCNITSDGLKAIGNLCISLRELSLSKCSGVTDDA 350
Query: 302 LSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQEL-------------VLIAM 348
LS V + K LRKL I R +I D + S+A C +L L +LI
Sbjct: 351 LSFVVSKHKDLRKLDITCCR--KITDVSIASIANACRSLTSLKMESCTLVSSEAYILIGQ 408
Query: 349 ---YPTSLSLAEIASNCQGLERFALC--------GIG-TVGDADIECFAAKCGALKKMCI 396
Y L L + + +GLE + C GI + D + C LK++ +
Sbjct: 409 KCHYLEELDLTDNEIDDEGLESISRCSRLSSLKLGICLNITDKGVANVGMCCSKLKELDL 468
Query: 397 KGCP-VSNAGIAAFASGCPN 415
C V++ GI+A ASGCP+
Sbjct: 469 YRCTGVTDLGISAIASGCPS 488
>Medtr7g112570.3 | F-box/LRR protein | HC | chr7:46304993-46309239 |
20130731
Length = 623
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 44/336 (13%)
Query: 110 RATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNC--------------GKT 155
+ + D GL I++ C LE+L L+ C EI+++G+ ++ C ++
Sbjct: 193 KCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNES 252
Query: 156 LKKLS----------VGSCMFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSI 205
L+ ++ VG + G+ + + C +L+ + V R V G SV
Sbjct: 253 LRSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVIS-GH 311
Query: 206 EGVXXXXXXXXXXXXVNGHSF----APLIIGSKKLQTLKLIRCLG--DWDATLSTVGRVN 259
EG+ GH APL G K L+ L +IR G D L +G
Sbjct: 312 EGLEQINA---------GHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNC 362
Query: 260 SGLVEIHLEK-VQVSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHID 318
LVE+ L K + V+++G+ V C NL TL L +D+ +S +A C L L ++
Sbjct: 363 KSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 319 GWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGD 378
+ + + GL + +C L+EL L + + S C L R L + D
Sbjct: 423 S--CDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISD 480
Query: 379 ADIECFAAKCGALKKMCIKGCP-VSNAGIAAFASGC 413
+ A C L ++ + C + + G+AA +GC
Sbjct: 481 IGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGC 516
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 236 LQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ-VSDVGLAGVSKCFNLETLHLVKT 294
L LKL C + L +G L E+ L V+D+ L +S+C L L L
Sbjct: 416 LACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLC 475
Query: 295 PECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLS 354
SD GL+ +A C L +L D +R RIGDDGL ++ C L L L + +
Sbjct: 476 TNISDIGLAHIACNCPKLTEL--DLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDA 533
Query: 355 LAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGC-PVSNAGIAAFA 410
+ SN L F L G+ + I+ A C L + +K C + + G A A
Sbjct: 534 GLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLANLDLKHCEKLDDTGFRALA 590
>Medtr1g012520.1 | EIN3-binding F-box-like protein | HC |
chr1:2502649-2506197 | 20130731
Length = 643
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 19/308 (6%)
Query: 110 RATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSC-MFGA 168
+S+GD+GLI I+ C+ LE+L L C I++ ++ A+ C L +LS+ SC
Sbjct: 198 NVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALITVAKKC-PNLTELSLESCPSIRN 256
Query: 169 KGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXXXXXXXXXVNGHSFAP 228
+G+ A+ + C L+ +S+K GV G + + G+ V+ S A
Sbjct: 257 EGLQAIGKFCPNLKAISIKDCAGV---GDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAV 313
Query: 229 LIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ----VSDVGLAGVSK-C 283
+ K + L L + +G N GL ++ + V+DVG+ V K C
Sbjct: 314 IGHYGKTVTDLVLNFLPNVSERGFWVMGNAN-GLHKLKSLTIASCRGVTDVGIEAVGKGC 372
Query: 284 FNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNC-PNLQE 342
NL+++HL K SD+GL + L L ++ +RI G V NC L+
Sbjct: 373 PNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLE--ECHRITQFGFFGVLFNCGAKLKA 430
Query: 343 LVLIAMYPTS---LSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGC 399
L +I+ + L L+ + S C+ L ++C G+A + C L+++ + G
Sbjct: 431 LSMISCFGIKDLDLELSPV-SPCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGL 489
Query: 400 P-VSNAGI 406
V++AG+
Sbjct: 490 KGVTDAGL 497
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 109 RRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSCMFGA 168
+ + D+GLI + LE L+L C IT+ G G NCG LK LS+ SC FG
Sbjct: 381 HKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKALSMISC-FGI 439
Query: 169 KGV---YAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXXXXXXXXXVNGHS 225
K + + + C L LS+ G G+ SV G
Sbjct: 440 KDLDLELSPVSPCESLRSLSICNCPGF-GNATLSVLG----------------------K 476
Query: 226 FAPLIIGSKKLQTLKLIRCLGDWDA-TLSTVGRVNSGLVEIHL-------EKVQVSDVGL 277
P +LQ ++L G DA L + +GLV+++L +KV S V L
Sbjct: 477 LCP------QLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCVNLTDKVVSSLVNL 530
Query: 278 AGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAK-N 336
G + LE L+L S++ L+ +AE C++L L + + I D G+ ++A
Sbjct: 531 HG----WTLEILNLEGCINISNASLAAIAEHCQLLCDLD---FSMCTISDSGITALAHAK 583
Query: 337 CPNLQELVL 345
NLQ L L
Sbjct: 584 QINLQILSL 592
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 28/116 (24%)
Query: 301 GLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIAS 360
GL VA C L+ + W ++ +GD+GLI EIA+
Sbjct: 180 GLKAVASGCPSLKSFSL--WNVSSVGDEGLI-------------------------EIAN 212
Query: 361 NCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGCP-VSNAGIAAFASGCPN 415
CQ LE+ LC + D + A KC L ++ ++ CP + N G+ A CPN
Sbjct: 213 GCQKLEKLDLCKCPAISDKALITVAKKCPNLTELSLESCPSIRNEGLQAIGKFCPN 268
>Medtr7g112570.2 | F-box/LRR protein | HC | chr7:46304993-46309996 |
20130731
Length = 605
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 44/336 (13%)
Query: 110 RATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNC--------------GKT 155
+ + D GL I++ C LE+L L+ C EI+++G+ ++ C ++
Sbjct: 193 KCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNES 252
Query: 156 LKKLS----------VGSCMFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSI 205
L+ ++ VG + G+ + + C +L+ + V R V G SV
Sbjct: 253 LRSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVIS-GH 311
Query: 206 EGVXXXXXXXXXXXXVNGHSF----APLIIGSKKLQTLKLIRCLG--DWDATLSTVGRVN 259
EG+ GH APL G K L+ L +IR G D L +G
Sbjct: 312 EGLEQINA---------GHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNC 362
Query: 260 SGLVEIHLEK-VQVSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHID 318
LVE+ L K + V+++G+ V C NL TL L +D+ +S +A C L L ++
Sbjct: 363 KSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 319 GWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGD 378
+ + + GL + +C L+EL L + + S C L R L + D
Sbjct: 423 S--CDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISD 480
Query: 379 ADIECFAAKCGALKKMCIKGCP-VSNAGIAAFASGC 413
+ A C L ++ + C + + G+AA +GC
Sbjct: 481 IGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGC 516
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 236 LQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ-VSDVGLAGVSKCFNLETLHLVKT 294
L LKL C + L +G L E+ L V+D+ L +S+C L L L
Sbjct: 416 LACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLC 475
Query: 295 PECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLS 354
SD GL+ +A C L +L D +R RIGDDGL ++ C L L L + +
Sbjct: 476 TNISDIGLAHIACNCPKLTEL--DLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDA 533
Query: 355 LAEIASNCQGLERFALCGIGTVGDADIECFAAKCGALKKMCIKGC-PVSNAGIAAFA 410
+ SN L F L G+ + I+ A C L + +K C + + G A A
Sbjct: 534 GLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLANLDLKHCEKLDDTGFRALA 590
>Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-46310023 |
20130731
Length = 679
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 44/336 (13%)
Query: 110 RATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNC--------------GKT 155
+ + D GL I++ C LE+L L+ C EI+++G+ ++ C ++
Sbjct: 193 KCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNES 252
Query: 156 LKKLS----------VGSCMFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSI 205
L+ ++ VG + G+ + + C +L+ + V R V G SV
Sbjct: 253 LRSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVIS-GH 311
Query: 206 EGVXXXXXXXXXXXXVNGHSF----APLIIGSKKLQTLKLIRCLG--DWDATLSTVGRVN 259
EG+ GH APL G K L+ L +IR G D L +G
Sbjct: 312 EGLEQINA---------GHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNC 362
Query: 260 SGLVEIHLEK-VQVSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHID 318
LVE+ L K + V+++G+ V C NL TL L +D+ +S +A C L L ++
Sbjct: 363 KSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 319 GWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGD 378
+ + + GL + +C L+EL L + + S C L R L + D
Sbjct: 423 S--CDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISD 480
Query: 379 ADIECFAAKCGALKKMCIKGCP-VSNAGIAAFASGC 413
+ A C L ++ + C + + G+AA +GC
Sbjct: 481 IGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGC 516
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 272 VSDVGLAGVSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLI 331
V+D+ L +S+C L L L SD GL+ +A C L +L D +R RIGDDGL
Sbjct: 453 VNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTEL--DLYRCVRIGDDGLA 510
Query: 332 SVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGIGTVGDADIECFAAKCGAL 391
++ C L L L + + + SN L F L G+ + I+ A C L
Sbjct: 511 ALTTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRL 570
Query: 392 KKMCIKGC-PVSNAGIAAFA 410
+ +K C + + G A A
Sbjct: 571 ANLDLKHCEKLDDTGFRALA 590
>Medtr8g028140.1 | F-box/LRR protein | HC | chr8:10472875-10471688 |
20130731
Length = 395
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 155/385 (40%), Gaps = 42/385 (10%)
Query: 38 AEIPDECLAAIFH-LLTTTDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSR 96
+PD+CL IFH L TDR+ CRRWLR+ NRR L S+L+ PS S
Sbjct: 20 THLPDDCLTIIFHGLDCRTDRESFGLTCRRWLRIQNFNRRTLQFECSFSILN--PSSLSA 77
Query: 97 --FDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGK 154
D T R RR + LE L L GC E+ + G+ G
Sbjct: 78 KGLDVYTVHIHRLLRRF---------------QHLESLSLCGCTELDDSGLTRLLSY-GS 121
Query: 155 TLKKLSVGSCM-FGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXX 213
L+KL++ C+ G+ V C L +S+ R + +G E++ +
Sbjct: 122 NLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLYRCLIITDEGLETLTTACLS---LKCI 178
Query: 214 XXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGR--VNSGLVEIHLEKVQ 271
++ L ++LQ + + C +S VG + LV + E +
Sbjct: 179 NLSYCSQISDKGLKALTQQCRQLQAINVSHC-----ERISGVGFEGCSKSLVHVEAESCK 233
Query: 272 VSDVGLAGVSKCFNLETLHLVKTPECSDSG--LSGVAERCKMLRKLHIDGWRINR-IGDD 328
+S G+ G+ +E L V S SG L G+ L I +R+ R + D
Sbjct: 234 LSLEGVVGIVSGGGIEHLD-VSCLSWSPSGDPLRGIG----FSSSLKILNFRMCRSVSDA 288
Query: 329 GLISVAKNCPNLQELVLIAMYPTSLS-LAEIASNCQGLERFALCGIGTVGDADIECFAAK 387
+I++AK C L+E L + S+S + CQ L+R + + D +
Sbjct: 289 SIIAIAKGCTLLEEWNLALCHEVSISGWQAVGLYCQNLKRLHVNRCLNLTDNGLRALRDG 348
Query: 388 CGALKKMCIKGCP-VSNAGIAAFAS 411
C +L + + GC V+ + F S
Sbjct: 349 CRSLSILYLNGCARVTPLALELFKS 373
>Medtr8g028140.2 | F-box/LRR protein | HC | chr8:10472875-10471688 |
20130731
Length = 395
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 155/385 (40%), Gaps = 42/385 (10%)
Query: 38 AEIPDECLAAIFH-LLTTTDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSR 96
+PD+CL IFH L TDR+ CRRWLR+ NRR L S+L+ PS S
Sbjct: 20 THLPDDCLTIIFHGLDCRTDRESFGLTCRRWLRIQNFNRRTLQFECSFSILN--PSSLSA 77
Query: 97 --FDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGK 154
D T R RR + LE L L GC E+ + G+ G
Sbjct: 78 KGLDVYTVHIHRLLRRF---------------QHLESLSLCGCTELDDSGLTRLLSY-GS 121
Query: 155 TLKKLSVGSCM-FGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXX 213
L+KL++ C+ G+ V C L +S+ R + +G E++ +
Sbjct: 122 NLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLYRCLIITDEGLETLTTACLS---LKCI 178
Query: 214 XXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGR--VNSGLVEIHLEKVQ 271
++ L ++LQ + + C +S VG + LV + E +
Sbjct: 179 NLSYCSQISDKGLKALTQQCRQLQAINVSHC-----ERISGVGFEGCSKSLVHVEAESCK 233
Query: 272 VSDVGLAGVSKCFNLETLHLVKTPECSDSG--LSGVAERCKMLRKLHIDGWRINR-IGDD 328
+S G+ G+ +E L V S SG L G+ L I +R+ R + D
Sbjct: 234 LSLEGVVGIVSGGGIEHLD-VSCLSWSPSGDPLRGIG----FSSSLKILNFRMCRSVSDA 288
Query: 329 GLISVAKNCPNLQELVLIAMYPTSLS-LAEIASNCQGLERFALCGIGTVGDADIECFAAK 387
+I++AK C L+E L + S+S + CQ L+R + + D +
Sbjct: 289 SIIAIAKGCTLLEEWNLALCHEVSISGWQAVGLYCQNLKRLHVNRCLNLTDNGLRALRDG 348
Query: 388 CGALKKMCIKGCP-VSNAGIAAFAS 411
C +L + + GC V+ + F S
Sbjct: 349 CRSLSILYLNGCARVTPLALELFKS 373
>Medtr4g036815.1 | F-box-like protein | HC | chr4:13456407-13459208
| 20130731
Length = 494
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 32/311 (10%)
Query: 24 DADFPNDSLIRDYTAEIPDECLAAIFHLLTTTDRKICSAVCRRWLRVDGENRRRLSLNAE 83
+ +FPN S+I D T + DE L I L + R + S VC+RWL + G R + +
Sbjct: 67 NPNFPNFSII-DQTLLLSDEILLNILSKLPDSQRNVNSLVCKRWLNLQGRLVRSIRIRDW 125
Query: 84 ASLLDAIPSLFSRFDSVTKLSLRCTRRATSIGDDGLI---LISLRCKGLERLKLRGCRE- 139
+L L RF ++ + L + + L+ ++++ C E
Sbjct: 126 NFVLSG--RLIYRFPNLNHVDLIHGSLILTQSSNILMSSNVLNMYIDSGSSPNWFNCEEN 183
Query: 140 -----ITEIGMVGFARNCGKTLKKLSVGSCMFGAKGVYAVIEHCTVLEELSVKR-----L 189
+ + G+V A C + +G+ G+ ++ E C+ L+EL +++ L
Sbjct: 184 MLPVEVIDNGLVALANGCPNLRRVQVIGA---SEMGLLSLAEECSTLQELELQKCSDNVL 240
Query: 190 RGVDGDGGESVPGV--SIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGD 247
RG+ G + + ++EG V+ L G K+L L+L C G
Sbjct: 241 RGIAACGNLQILKLVGNVEGFYGSV--------VSDIGLTILAQGCKRLVKLELCGCEGS 292
Query: 248 WDATLSTVGRVNSGLVEIHLEKVQVSDVGLAGVSKCFNLETLHLVKTPECS-DSGLSGVA 306
+D + +G+ L E+ L ++ D +A VS C NL+TL L + + GL
Sbjct: 293 FDG-IKAIGKCCQMLEELTLCDHRMDDGWMAAVSYCENLKTLRLQSCKKIDLNPGLDEYL 351
Query: 307 ERCKMLRKLHI 317
C L +LH+
Sbjct: 352 GSCPALERLHL 362
>Medtr4g091290.1 | transport inhibitor response 1 protein | HC |
chr4:36143922-36147200 | 20130731
Length = 588
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 165/452 (36%), Gaps = 111/452 (24%)
Query: 35 DYTAEIPDECLAAIFHLLTT-TDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSL 93
D ++ PDE L + ++ + DR S VC+ W + +RR + + ++ I L
Sbjct: 21 DSNSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEI--L 78
Query: 94 FSRFDSVTKLSLRCTRRATSIG----------DDGLILISLRCKGLERLKLRGCREITEI 143
RF ++ ++++ R + L++ + + LE L+L+ R
Sbjct: 79 TRRFPNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLK--RMAVSD 136
Query: 144 GMVGFARNCGKTLKKLSVGSC-MFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGG----- 197
+ F K LS+ SC F G+ AV +C L EL ++ GVD G
Sbjct: 137 ESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCKNLTELDIQE-NGVDDKSGNWLSC 195
Query: 198 --ESVPGVSIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTV 255
ES + I VN + L+ L+TLK+ + + TL +
Sbjct: 196 FPESFTSLEI------LNFANLSNDVNFDALEKLVARCNSLKTLKVNKSV-----TLEQL 244
Query: 256 GR----------VNSGLVEIHLEKVQVSDVGLAGVSKCFNLETL----------HLVKTP 295
R + +G L Q S++ A + C +L TL H V P
Sbjct: 245 QRLLVRAPQLCELGTGSFSQELTGQQYSELERA-FNNCRSLHTLSGLWVASAQYHQVLYP 303
Query: 296 ECSD-------------SGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQE 342
C++ GLS + RC LR+L W ++ + D GL +V CP L+E
Sbjct: 304 VCTNLTFLNFSYAPLDSEGLSKLLVRCPNLRRL----WVLDTVEDKGLEAVGSYCPLLEE 359
Query: 343 LVLIAMYP----------------------------------TSLSLAEIASNCQGLERF 368
L + P T+ ++A + NC F
Sbjct: 360 LRVFPGDPFEEGAAHGVTESGFIAVSEGCRKLHYVLYFCRQMTNAAVATVVENCPDFTHF 419
Query: 369 ALCGIGTVGDADI---ECFAAKCGALKKMCIK 397
LC I T G D E GA+ K C K
Sbjct: 420 RLC-IMTPGQPDYQTGEPMDEAFGAVVKTCTK 450
>Medtr5g088767.1 | hypothetical protein | LC |
chr5:38551781-38550171 | 20130731
Length = 100
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 221 VNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGL 262
VN HSFA LIIG KKLQT KLIRC+GD + L TVG++NSGL
Sbjct: 51 VNEHSFAQLIIGLKKLQTSKLIRCIGDCYSMLGTVGKMNSGL 92
>Medtr4g114640.1 | EIN3-binding F-box-like protein | HC |
chr4:47161796-47165070 | 20130731
Length = 633
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 261 GLVEIHLEKVQVSDVGLAGVSK----CFNLETLHL---VKTPECSDSGLSGVAERCKMLR 313
G + LE + +DV LA ++ C L L++ T +D GLS VA C LR
Sbjct: 124 GWLTRRLEGRKATDVRLAAIAVGTGCCGGLGKLYIRGNNSTRGVTDRGLSAVACGCPSLR 183
Query: 314 KLHIDGWRINRIGDDGLISVAKNCPNLQELVLI-AMYPTSLSLAEIASNCQGLERFALCG 372
L + W ++ IGD GL +AK C L+ L L + T+ L IA C L +
Sbjct: 184 SLSL--WNVSSIGDKGLCEIAKGCHMLETLDLSHSSSITNKGLIAIAEGCPNLTTLNIES 241
Query: 373 IGTVGDADIECFAAKCGALKKMCIKGCPV 401
+G+ ++ A C L +CIK CP+
Sbjct: 242 CSMIGNEGLQTVAKLCPKLHSICIKDCPL 270
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 138/383 (36%), Gaps = 87/383 (22%)
Query: 112 TSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSC-MFGAKG 170
+SIGD GL I+ C LE L L IT G++ A C L L++ SC M G +G
Sbjct: 191 SSIGDKGLCEIAKGCHMLETLDLSHSSSITNKGLIAIAEGC-PNLTTLNIESCSMIGNEG 249
Query: 171 VYAVIEHCTVLEELSVKR--LRGVDG----------------------DGGESVPGVSIE 206
+ V + C L + +K L G G D +V G +
Sbjct: 250 LQTVAKLCPKLHSICIKDCPLVGDHGVSSLLSLASNLSKVKLQILNITDFSLAVIGHYGK 309
Query: 207 GVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIH 266
V G + G +KL +L + C G DA++ +G+ L ++
Sbjct: 310 AVTNLVLSGLQNVSERGFCVMGVAQGLQKLMSLTITSCQGVTDASIEAMGKGFPHLKQMC 369
Query: 267 LEKVQ-VSDVGLAGVSKCF-NLETLHLVKTPECSDSG----LSGVAER------------ 308
L + VSD GLA +KC +L++L L + + G LS + +
Sbjct: 370 LRRCSFVSDFGLAEFAKCTRSLQSLQLEECNRFTQCGIFYALSNIKTKLKSFTLVKCMGI 429
Query: 309 ------------CKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYP-TSLSL 355
CK LR L I G + V K CP LQ + L + T L
Sbjct: 430 KDIDVEVSMLSPCKSLRSLTIQ--NCPGFGSASMAVVGKLCPQLQHVDLTGLCGITDAGL 487
Query: 356 AEIASNCQG----------------------------LERFALCGIGTVGDADIECFAAK 387
+ NC+ LE L G + DA + A
Sbjct: 488 LPLLENCEAGLVEVNLTGCWNLTDYIVSKVARLHGGTLEILNLDGCQNITDASLVAVADD 547
Query: 388 CGALKKMCIKGCPVSNAGIAAFA 410
C L + + C +++AGIA +
Sbjct: 548 CLLLNDLDVSKCAITDAGIAVLS 570
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 52/342 (15%)
Query: 110 RATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVGSC-MFGA 168
++SI + GLI I+ C L L + C I G+ A+ C K L + + C + G
Sbjct: 215 HSSSITNKGLIAIAEGCPNLTTLNIESCSMIGNEGLQTVAKLCPK-LHSICIKDCPLVGD 273
Query: 169 KGVYAVIEHCTVLEELSVKRLRGVD------GDGGESVPGVSIEGVXXXXXXXXXXXXVN 222
GV +++ + L ++ ++ L D G G++V + + G+
Sbjct: 274 HGVSSLLSLASNLSKVKLQILNITDFSLAVIGHYGKAVTNLVLSGLQNVSE--------R 325
Query: 223 GHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEIHLEKVQ-VSDVGLAGVS 281
G + G +KL +L + C G DA++ +G+ L ++ L + VSD GLA +
Sbjct: 326 GFCVMGVAQGLQKLMSLTITSCQGVTDASIEAMGKGFPHLKQMCLRRCSFVSDFGLAEFA 385
Query: 282 KCF-NLETLHLVKTPECSDSG----LSGVAER------------------------CKML 312
KC +L++L L + + G LS + + CK L
Sbjct: 386 KCTRSLQSLQLEECNRFTQCGIFYALSNIKTKLKSFTLVKCMGIKDIDVEVSMLSPCKSL 445
Query: 313 RKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYP-TSLSLAEIASNCQ-GLERFAL 370
R L I G + V K CP LQ + L + T L + NC+ GL L
Sbjct: 446 RSLTIQ--NCPGFGSASMAVVGKLCPQLQHVDLTGLCGITDAGLLPLLENCEAGLVEVNL 503
Query: 371 CGIGTVGDADIECFA-AKCGALKKMCIKGCP-VSNAGIAAFA 410
G + D + A G L+ + + GC +++A + A A
Sbjct: 504 TGCWNLTDYIVSKVARLHGGTLEILNLDGCQNITDASLVAVA 545
>Medtr1g114610.1 | F-box/LRR protein | HC | chr1:51737951-51741223 |
20130731
Length = 416
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 160/392 (40%), Gaps = 43/392 (10%)
Query: 38 AEIPDECLAAIFHLLTTTDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFSR- 96
A DE + + + + D++ VC+RWLR+ R++LS A +L + F+R
Sbjct: 19 ALTDDELRSILAKVDSEKDKETFGLVCKRWLRLQSTERKKLSARAGPHMLRKMADRFTRL 78
Query: 97 --FDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGK 154
D +S R + D +I RC L L L C+ IT++GM
Sbjct: 79 VELDLAQSIS-RSFYPGVTDSDLAVIANGFRC--LRILNLHNCKGITDVGMKAIGDGLS- 134
Query: 155 TLKKLSVGSC-MFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGVSIEGVXXXXX 213
L L V C KG+ AV + C +L + L G + +S
Sbjct: 135 LLHSLDVSYCRKLTDKGLSAVAKGCC---DLRILHLTGCRFVTDSILEALSKNCRNLEEL 191
Query: 214 XXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATLSTVGRVNSGLVEI--HLEKVQ 271
+ + L G ++++ L + +C D +S++ S ++ L+ +
Sbjct: 192 VLQGCTSITDNGLMSLASGCQRIKFLDINKCSTVSDVGVSSICNACSSSLKTLKLLDCYR 251
Query: 272 VSDVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCK-MLRKLHIDGWRINRIGDDG 329
+ D + ++K C NLETL + + S+ + +A C+ L+ L +D W +N + D
Sbjct: 252 IGDKSILSLAKFCDNLETLIIGGCRDVSNDAIKLLATACRNKLKNLRMD-WCLN-VSDSS 309
Query: 330 LISVAKNCPNLQELVL-------------IAMYPTSLSLAEI-ASNCQGLERFALCGIGT 375
L + C NL+ L + I+ LSL + SNC + + GIG
Sbjct: 310 LSCILSQCRNLEALDIGCCEEVTDTAFHHISNEEPGLSLKILKVSNCP---KITVVGIGI 366
Query: 376 VGDADIECFAAKCGALKKMCIKGCP-VSNAGI 406
KC L+ + ++ CP ++ AG+
Sbjct: 367 --------LLGKCSYLEYLDVRSCPHITKAGL 390
>Medtr3g107280.1 | EIN3-binding F-box-like protein | HC |
chr3:49486587-49482963 | 20130731
Length = 641
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 312 LRKLHIDGWRINR-IGDDGLISVAKNCPNLQELVLIAMYPTS-LSLAEIASNCQGLERFA 369
L KL I G +R + D GL +VA CP+L+ L + S L EIA+ C +E
Sbjct: 160 LGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVATISDAGLIEIANGCHQIENLD 219
Query: 370 LCGIGTVGDADIECFAAKCGALKKMCIKGCP-VSNAGIAAFASGCPN 415
LC + T+ D + A C L ++ I+ CP + N G+ A CPN
Sbjct: 220 LCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPN 266
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 162/429 (37%), Gaps = 76/429 (17%)
Query: 40 IPDECLAAIFHLLTT-TDRKICSAVCRRWLRV------------------DGENRR---- 76
+PDECL I L DR +C++V +RWL + D +N+
Sbjct: 71 LPDECLFEILRRLPEGQDRSLCASVSKRWLTLLSSISKNEICSNASSGNKDSDNQEFGDE 130
Query: 77 -RLSLNAEASL-----LDAIPSLFSRFDSVTKLSLRCTRRATSIGDDGLILISLRCKGLE 130
LS + E L AI + KLS+ + ++ D GL ++ C L+
Sbjct: 131 GYLSRSLEGKKATDVRLAAIAVGTQSRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLK 190
Query: 131 RLKLRGCREITEIGMVGFARNCGKT----LKKLSVGSCMFGAKGVYAVIEHCTVLEELSV 186
L I++ G++ A C + L KL K + AV +HC L ELS+
Sbjct: 191 SFTLWDVATISDAGLIEIANGCHQIENLDLCKLPT----ISDKALIAVAKHCPNLTELSI 246
Query: 187 KRLRGVDGDGGESV---------------PGVSIEGVXXXXXXXXXXXXVNGHSFAPLII 231
+ + +G ++ PGV +G+ A +I+
Sbjct: 247 ESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCS------------ASIIL 294
Query: 232 GSKKLQTLKLIRCLGDWD-ATLSTVGRVNSGLVEIHLEKVQVSDVGLAGVSKCF-NLETL 289
L++L + D+ A + G V + LV L V + G L +L
Sbjct: 295 KKLTLESLA----VSDYSLAVIGQYGFVVTDLVLNFLPNVTEKGFWVMGNGHALQQLTSL 350
Query: 290 HLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMY 349
+ P +D GL V + C ++ + R + + D+GL+S K P++ L L +
Sbjct: 351 TIGLCPGVTDIGLHAVGKGCPNVKNFQLR--RCSFLSDNGLVSFTKAAPSIVSLQLEECH 408
Query: 350 P-TSLSLA-EIASNCQGLERFALCGIGTVGDADIECFAA-KCGALKKMCIKGCP-VSNAG 405
T +A I + L+ L + D ++ A C + + I+ CP V N
Sbjct: 409 RITQFGVAGAILNRGTKLKVLTLVSCYGIKDLNLNLPAVPPCQTISSLSIRNCPGVGNFT 468
Query: 406 IAAFASGCP 414
+ CP
Sbjct: 469 LNVLGKLCP 477
>Medtr1g088950.1 | transport inhibitor response-like protein | HC |
chr1:39907710-39904364 | 20130731
Length = 589
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 152/415 (36%), Gaps = 91/415 (21%)
Query: 37 TAEIPDECLAAIFHLL-TTTDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFS 95
+ P+E L +F + +T DR S VC+ W ++ RRR+ + ++ A+ +
Sbjct: 11 SYSFPEEVLEHVFSFIDSTKDRGSISLVCKSWYEIERWCRRRVFVGNCYAITPAM--VIK 68
Query: 96 RFDSVTKLSLR-------------------------------CTR----RATSIGDDGLI 120
RF V ++L+ C + I DD L
Sbjct: 69 RFPKVRSITLKGKPHFADFNLVPEGWGGYVCPWIKAMAVAFPCLEEIKLKRMVISDDCLD 128
Query: 121 LISLRCKGLERLKLRGCREITEIGMVGFARNCGKTLKKLSVG------------------ 162
LI+ K + L L C T G+ A NC + L++L +
Sbjct: 129 LIAKSFKNFKVLVLISCEGFTTDGLASIAANC-RNLRELDLRESEVEDICGHWLSHFPDS 187
Query: 163 ---------SCMFGAKGVYAV---IEHCTVLEELSVKRLRGVDGDGG--ESVPGVSIEGV 208
SC+ A+ + C + L + R +D P + G
Sbjct: 188 YTSLVSLNISCLANEVNFPALERLVSRCPNMHTLRLNRAAPLDKLANLLRGAPQLVELGT 247
Query: 209 XXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWD---ATLSTVGRVNSGLVEI 265
N A G K+++ L G WD + L V V S L +
Sbjct: 248 GAYTSEMRPEVFTN---LAAAFSGCKQMKGLS-----GFWDVLPSYLPAVYPVCSRLTSL 299
Query: 266 HLEKVQVSDVGLAG-VSKCFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHID-----G 319
+L + L V +C +L+ L ++ E D+GL +A CK LR+L + G
Sbjct: 300 NLSYATIQSPDLIKLVGQCQSLQRLWVLDYIE--DAGLDMLAASCKDLRELRVFPSDPFG 357
Query: 320 WRIN-RIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALCGI 373
N + + GL+SV++ CP L ++ T+ +L IA N + RF LC I
Sbjct: 358 LEANVALTEQGLVSVSEGCPKLHSVLYFCRQMTNAALNTIARNRPNMTRFRLCII 412
>Medtr3g408430.1 | F-box plant-like protein | HC |
chr3:1495741-1498734 | 20130731
Length = 481
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 151/371 (40%), Gaps = 42/371 (11%)
Query: 35 DYTAEIPDECLAAIFHLLTTTDRKICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLF 94
D T + DE L I L + K V +RWL + G R L + +L L
Sbjct: 59 DLTLLLSDEILLKILSKLPNSQSKSNFLVSKRWLNLQGRLIRSLKIFDLNFVLSG--RLI 116
Query: 95 SRFDSVTKLSLRCTRRATSIGDDGLILISLR----------CKGL-ERLKLRGCREITEI 143
RF ++T + L + +G++LI+ R C G E +K + + I
Sbjct: 117 YRFPNLTHVDLVPSTFVVH-PQNGVVLITHRVVSMRVDTEWCFGFSEEVKGKNLLPVEAI 175
Query: 144 --GMVGFARNCGKTLKKLSV--GSCMFGAKGVYAVIEHCTVLEELSVKR-----LRGVDG 194
G+ A+ C L+KL V GS +G+ ++ E C L EL +++ LRGV
Sbjct: 176 DKGLKEVAKGC-PNLRKLKVTGGS----EEGLVSIGEECVTLMELELQKCNDDVLRGVAA 230
Query: 195 DGGESVPGV--SIEGVXXXXXXXXXXXXVNGHSFAPLIIGSKKLQTLKLIRCLGDWDATL 252
V + S++G V+ L G K+L L+L+ C G +D +
Sbjct: 231 CKNLQVVKLIGSVDGFYESV--------VSDIGLTILAQGCKRLVKLELVGCEGSFDG-I 281
Query: 253 STVGRVNSGLVEIHLEKVQVSDVGLAGVSKCFNLETLHLVKTPECS-DSGLSGVAERCKM 311
+G L E+ ++ D LAGVS C NL+TL V + GL C
Sbjct: 282 KAIGACCLMLEELVFVDHRMDDGWLAGVSFCENLKTLRFVSCKVIDGNPGLEEHLGYCVA 341
Query: 312 LRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFALC 371
L LH ++ + + +V C +E+VL + + +A C+ ++ F +
Sbjct: 342 LESLHFQKCQLR--DKNAMSAVFSVCRAAKEVVLQDCWGLDDGVFGLAVVCRRVKLFDIE 399
Query: 372 GIGTVGDADIE 382
G + +E
Sbjct: 400 GCSLLSTEGLE 410
>Medtr1g023530.1 | F-box/LRR protein, putative | LC |
chr1:7555650-7554246 | 20130731
Length = 456
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 149/397 (37%), Gaps = 37/397 (9%)
Query: 40 IPDECLAAIFHLLTTTDR----KICSAVCRRWLRVDGENRRRLSLNAEASLLDAIPSLFS 95
+PDEC +F L D K S V +++L + N SL + LL +P LF
Sbjct: 31 LPDECWQLVFKFLNNGDDNRYLKTLSLVSKQFLSI--TNPLLFSLIIDHRLLSFLPRLFH 88
Query: 96 RFDSVTKLSLRCTRRATSIGDDGLILISLRCKGLERLKLRGCREITEIGMVGFARNCGKT 155
RF ++T SL R I D L IS L L + I IG+ F++N T
Sbjct: 89 RFTNLT--SLVFARNCLDI-DKLLSEISCFPLNLTSLDISNQPTIPAIGLRAFSQNIT-T 144
Query: 156 LKKLSVGSC-MFGAKGVYAVIEHCTVLEELSVKRLRGVDGDGGESVPGV---SIEGVXXX 211
L L+ + + + E +LEEL++ R D + G+ S+
Sbjct: 145 LTSLTCSKMDSINSNDLLLIAECFPLLEELNLGYPRNKFKDHSNFLNGLETLSLALSKLT 204
Query: 212 XXXXXXXXXVNGHSFAPLIIGSKKLQTLKL---------IRCLGDWD------ATLSTVG 256
+N S L K LQ L +R L D ATL +
Sbjct: 205 RINLSDHYYINDISLVHLFKNCKLLQELAFFSALHERPTLRSLSFTDHESRNFATLFALV 264
Query: 257 RVNSGLVEIHLEKVQVSDVGLAGVSKCF------NLETLHLVKTPECSDSGLSGVAERCK 310
+ L EI LE + + NL++L L + + D + +A
Sbjct: 265 KNYPSLSEIKLEYTYFTKNNMENSYSLMDFVVSPNLKSLCLGHSLQLRDENIKVLASIFP 324
Query: 311 MLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYPTSLSLAEIASNCQGLERFAL 370
L L D I +G+ + + C N++ L L +L I+ +C GL + L
Sbjct: 325 NLELL--DLKNCYDISKEGIFHILRRCHNIRHLNLSYTSVDDEALYMISKSCGGLLQLLL 382
Query: 371 CGIGTVGDADIECFAAKCGALKKMCIKGCPVSNAGIA 407
G V + ++ C LK++ ++ C N I
Sbjct: 383 KGCDNVTEKGVKHVVENCTLLKEINLQNCGKVNGNIV 419
>Medtr4g130630.1 | F-box/LRR protein | HC | chr4:54430735-54429451 |
20130731
Length = 220
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 292 VKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIGDDGLISVAKNCPNLQELVLIAMYP- 350
++ CSD L+ VA+RC L L I RI D + +A CPNL+EL + Y
Sbjct: 90 IRIQHCSDRSLTLVAQRCSNLEILSIRS--SLRITDSSISMIAFGCPNLRELDIGYCYMI 147
Query: 351 TSLSLAEIASNCQGLERF---ALCGIGTVGDADIECFAAKCGALKKMCIKGCPVSNAGIA 407
T SL I NC L+R + T GD++ A L+ + I+ +S G+
Sbjct: 148 TQESLVVIGRNCPNLKRSQEKSASSNPTHGDSEAAAIANSMPHLEWLEIRYPKLSVKGLN 207
Query: 408 AFASGCPN 415
GCPN
Sbjct: 208 LICQGCPN 215
>Medtr3g088895.2 | F-box SKP2A-like protein | HC |
chr3:40692425-40696084 | 20130731
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 268 EKVQVSDVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIG 326
+K Q+ D + ++ C +L+ L L K+ + +D L +A C+ L KL+I G +
Sbjct: 111 DKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCRDLTKLNISG--CSAFS 168
Query: 327 DDGLISVAKNCPNLQELVLIAMY--PTSLSLAEIASNCQGLERFALCGIGTVGDADIECF 384
D+ L +A C L+ L L + +L I C L+ L VGD +
Sbjct: 169 DNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSL 228
Query: 385 AAKCGALKKMCIKGC-PVSNAGIAAFASGCPN 415
A C L+ + + GC +++ + A A+GCP+
Sbjct: 229 AYGCPDLRTVDLCGCVYITDDSVIALANGCPH 260
>Medtr3g088895.1 | F-box SKP2A-like protein | HC |
chr3:40692425-40696084 | 20130731
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 268 EKVQVSDVGLAGVSK-CFNLETLHLVKTPECSDSGLSGVAERCKMLRKLHIDGWRINRIG 326
+K Q+ D + ++ C +L+ L L K+ + +D L +A C+ L KL+I G +
Sbjct: 111 DKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCRDLTKLNISG--CSAFS 168
Query: 327 DDGLISVAKNCPNLQELVLIAMY--PTSLSLAEIASNCQGLERFALCGIGTVGDADIECF 384
D+ L +A C L+ L L + +L I C L+ L VGD +
Sbjct: 169 DNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSL 228
Query: 385 AAKCGALKKMCIKGC-PVSNAGIAAFASGCPN 415
A C L+ + + GC +++ + A A+GCP+
Sbjct: 229 AYGCPDLRTVDLCGCVYITDDSVIALANGCPH 260