Miyakogusa Predicted Gene

Lj4g3v0803490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0803490.1 Non Characterized Hit- tr|I1K283|I1K283_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.5,0,MORTALITY
FACTOR 4-LIKE PROTEIN,MRG; MRG,MRG domain; seg,NULL,CUFF.48062.1
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094988.1 | chromatin-binding protein | HC | chr4:39447669...   293   5e-80
Medtr3g102460.2 | chromatin-binding protein | HC | chr3:47218371...   196   2e-50
Medtr3g102460.1 | chromatin-binding protein | HC | chr3:47218316...   195   2e-50
Medtr3g102460.3 | chromatin-binding protein | HC | chr3:47218371...   161   4e-40
Medtr3g102460.4 | chromatin-binding protein | HC | chr3:47218316...   161   5e-40

>Medtr4g094988.1 | chromatin-binding protein | HC |
           chr4:39447669-39441563 | 20130731
          Length = 319

 Score =  293 bits (751), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 156/201 (77%), Positives = 167/201 (83%)

Query: 2   DAKVDKEDIKSNVSKGKKRKSDSGAEKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDK 61
           DAKV+KEDIK+  SKGKKRK DSG EKGS   EK  KIQIPA LKKQLVDDWDFV QQDK
Sbjct: 119 DAKVEKEDIKNIASKGKKRKIDSGVEKGSGNDEKLFKIQIPAPLKKQLVDDWDFVNQQDK 178

Query: 62  LVKLPRSPTIDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQY 121
           LVKLPRSPT+D+ILTKYLEYKSKKDS+ ADS GEILKGIR YFDKALPMML+YKKERKQ 
Sbjct: 179 LVKLPRSPTVDEILTKYLEYKSKKDSVEADSTGEILKGIRLYFDKALPMMLVYKKERKQC 238

Query: 122 SELVVDNASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRXXXXXXXXXXXXXXNQNT 181
           +E VVDN SPSTIYGAEHLLRLFVKLPELL+YVNIEEETL+R              NQ+T
Sbjct: 239 NEAVVDNVSPSTIYGAEHLLRLFVKLPELLSYVNIEEETLSRLQQKLLDFLRFLQKNQST 298

Query: 182 FFLSAYDVTKVSEGKGKGNDE 202
           FFLSAY+ TKVS GKGKG DE
Sbjct: 299 FFLSAYEGTKVSGGKGKGKDE 319


>Medtr3g102460.2 | chromatin-binding protein | HC |
           chr3:47218371-47213977 | 20130731
          Length = 277

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 122/179 (68%), Gaps = 1/179 (0%)

Query: 12  SNVSKGKKRKSDSGA-EKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDKLVKLPRSPT 70
           SNV++ +KRK+DS   EK +   +K V IQIP TLKKQLVDD++F+T   KLVKLPR+P 
Sbjct: 80  SNVARSRKRKNDSLVKEKLAVLPDKLVNIQIPLTLKKQLVDDFEFITHLGKLVKLPRTPN 139

Query: 71  IDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQYSELVVDNAS 130
           ++DI   Y +Y+ KK    ADS+ EI+KG+ CYFDKALP+MLLY  ER+QY E   ++  
Sbjct: 140 VNDIFKTYFDYRLKKSGSIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYQEACPNDIV 199

Query: 131 PSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRXXXXXXXXXXXXXXNQNTFFLSAYDV 189
           PS IYGAEHLLRLFVKLPELL + NIE +TL                NQ  FFLS+Y V
Sbjct: 200 PSAIYGAEHLLRLFVKLPELLFHANIEGDTLIELQAQVLDFLRFLRKNQRAFFLSSYHV 258


>Medtr3g102460.1 | chromatin-binding protein | HC |
           chr3:47218316-47214003 | 20130731
          Length = 314

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 122/179 (68%), Gaps = 1/179 (0%)

Query: 12  SNVSKGKKRKSDSGA-EKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDKLVKLPRSPT 70
           SNV++ +KRK+DS   EK +   +K V IQIP TLKKQLVDD++F+T   KLVKLPR+P 
Sbjct: 117 SNVARSRKRKNDSLVKEKLAVLPDKLVNIQIPLTLKKQLVDDFEFITHLGKLVKLPRTPN 176

Query: 71  IDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQYSELVVDNAS 130
           ++DI   Y +Y+ KK    ADS+ EI+KG+ CYFDKALP+MLLY  ER+QY E   ++  
Sbjct: 177 VNDIFKTYFDYRLKKSGSIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYQEACPNDIV 236

Query: 131 PSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRXXXXXXXXXXXXXXNQNTFFLSAYDV 189
           PS IYGAEHLLRLFVKLPELL + NIE +TL                NQ  FFLS+Y V
Sbjct: 237 PSAIYGAEHLLRLFVKLPELLFHANIEGDTLIELQAQVLDFLRFLRKNQRAFFLSSYHV 295


>Medtr3g102460.3 | chromatin-binding protein | HC |
           chr3:47218371-47213972 | 20130731
          Length = 245

 Score =  161 bits (408), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/134 (58%), Positives = 99/134 (73%), Gaps = 1/134 (0%)

Query: 12  SNVSKGKKRKSDSGA-EKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDKLVKLPRSPT 70
           SNV++ +KRK+DS   EK +   +K V IQIP TLKKQLVDD++F+T   KLVKLPR+P 
Sbjct: 80  SNVARSRKRKNDSLVKEKLAVLPDKLVNIQIPLTLKKQLVDDFEFITHLGKLVKLPRTPN 139

Query: 71  IDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQYSELVVDNAS 130
           ++DI   Y +Y+ KK    ADS+ EI+KG+ CYFDKALP+MLLY  ER+QY E   ++  
Sbjct: 140 VNDIFKTYFDYRLKKSGSIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYQEACPNDIV 199

Query: 131 PSTIYGAEHLLRLF 144
           PS IYGAEHLLRLF
Sbjct: 200 PSAIYGAEHLLRLF 213


>Medtr3g102460.4 | chromatin-binding protein | HC |
           chr3:47218316-47214786 | 20130731
          Length = 282

 Score =  161 bits (407), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/134 (58%), Positives = 99/134 (73%), Gaps = 1/134 (0%)

Query: 12  SNVSKGKKRKSDSGA-EKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDKLVKLPRSPT 70
           SNV++ +KRK+DS   EK +   +K V IQIP TLKKQLVDD++F+T   KLVKLPR+P 
Sbjct: 117 SNVARSRKRKNDSLVKEKLAVLPDKLVNIQIPLTLKKQLVDDFEFITHLGKLVKLPRTPN 176

Query: 71  IDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQYSELVVDNAS 130
           ++DI   Y +Y+ KK    ADS+ EI+KG+ CYFDKALP+MLLY  ER+QY E   ++  
Sbjct: 177 VNDIFKTYFDYRLKKSGSIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYQEACPNDIV 236

Query: 131 PSTIYGAEHLLRLF 144
           PS IYGAEHLLRLF
Sbjct: 237 PSAIYGAEHLLRLF 250