Miyakogusa Predicted Gene
- Lj4g3v0783230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0783230.1 tr|Q84LR0|Q84LR0_SOLLC Metal transporter
OS=Solanum lycopersicum GN=NRAMP3 PE=2 SV=1,73.33,2e-19,Nramp,Natural
resistance-associated macrophage protein; NATURAL
RESISTANCE-ASSOCIATED MACROPHAGE PRO,CUFF.48044.1
(61 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g016270.1 | metal transporter Nramp3 protein | HC | chr5:5... 109 7e-25
Medtr4g095075.1 | metal transporter Nramp3 protein | HC | chr4:3... 108 9e-25
Medtr3g102620.1 | metal transporter Nramp3 protein | HC | chr3:4... 99 9e-22
Medtr8g028050.1 | metal transporter Nramp3 protein | HC | chr8:1... 91 3e-19
Medtr3g088440.1 | NRAMP metal ion transporter 6 | HC | chr3:4014... 62 1e-10
Medtr3g088440.2 | NRAMP metal ion transporter 6 | HC | chr3:4014... 62 1e-10
Medtr3g088460.1 | NRAMP metal ion transporter 6 | HC | chr3:4013... 58 2e-09
Medtr3g088460.2 | NRAMP metal ion transporter 6 | HC | chr3:4013... 57 4e-09
Medtr2g104990.3 | NRAMP metal ion transporter 6 | HC | chr2:4525... 56 7e-09
Medtr2g104990.1 | NRAMP metal ion transporter 6 | HC | chr2:4525... 56 7e-09
Medtr2g104990.2 | NRAMP metal ion transporter 6 | HC | chr2:4525... 56 7e-09
>Medtr5g016270.1 | metal transporter Nramp3 protein | HC |
chr5:5805947-5801726 | 20130731
Length = 514
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCR+EYPTWAR+VLW M EV LIGSDIQEVIGSAIAIR+LSNG++PLWAGVVITALD
Sbjct: 118 LAELCRDEYPTWARIVLWLMTEVALIGSDIQEVIGSAIAIRILSNGLVPLWAGVVITALD 177
>Medtr4g095075.1 | metal transporter Nramp3 protein | HC |
chr4:39671944-39675611 | 20130731
Length = 515
Score = 108 bits (271), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 55/60 (91%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEYP WAR VLW MAE LIGSDIQEVIGSAIAIR+LSNGV+PLWAGVVITALD
Sbjct: 119 LAELCREEYPRWARYVLWVMAEFALIGSDIQEVIGSAIAIRILSNGVIPLWAGVVITALD 178
>Medtr3g102620.1 | metal transporter Nramp3 protein | HC |
chr3:47289507-47294931 | 20130731
Length = 528
Score = 99.0 bits (245), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 54/60 (90%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELC+EEYP WAR VLW MAE+ LIG+DIQEVIGSAIAI++LS GV+PLWAGV+ITA D
Sbjct: 132 LAELCKEEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWAGVLITASD 191
>Medtr8g028050.1 | metal transporter Nramp3 protein | HC |
chr8:10387812-10390054 | 20130731
Length = 546
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 54/60 (90%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEY WAR++LW +AE+ LI +DIQEVIGSAIA+++LS+G++P+WAGV+ITA D
Sbjct: 149 LAELCREEYSNWARLLLWFLAELALIAADIQEVIGSAIALKILSHGLLPIWAGVIITAFD 208
>Medtr3g088440.1 | NRAMP metal ion transporter 6 | HC |
chr3:40141672-40136599 | 20130731
Length = 531
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
++E+C EYP + + LW +AEV +I +DI EVIG+A A+ +L N +PLWAGV++T
Sbjct: 100 LSEVCEVEYPLFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFN--IPLWAGVLLTGFS 157
>Medtr3g088440.2 | NRAMP metal ion transporter 6 | HC |
chr3:40141672-40136599 | 20130731
Length = 393
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
++E+C EYP + + LW +AEV +I +DI EVIG+A A+ +L N +PLWAGV++T
Sbjct: 100 LSEVCEVEYPLFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFN--IPLWAGVLLTGFS 157
>Medtr3g088460.1 | NRAMP metal ion transporter 6 | HC |
chr3:40130339-40124722 | 20130731
Length = 542
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITA 58
++E+C+ EYP + + LW +AE+ +I +DI EVIG+A A+ +L + +P+W GV++T
Sbjct: 107 LSEICKAEYPWFVKYCLWILAELAVIAADIPEVIGTAFALNILFH--VPVWGGVLLTG 162
>Medtr3g088460.2 | NRAMP metal ion transporter 6 | HC |
chr3:40130339-40125301 | 20130731
Length = 421
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITA 58
++E+C+ EYP + + LW +AE+ +I +DI EVIG+A A+ +L + +P+W GV++T
Sbjct: 107 LSEICKAEYPWFVKYCLWILAELAVIAADIPEVIGTAFALNILFH--VPVWGGVLLTG 162
>Medtr2g104990.3 | NRAMP metal ion transporter 6 | HC |
chr2:45254857-45250032 | 20130731
Length = 545
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AE CR EY + +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T L
Sbjct: 111 LAEHCRAEYSRVSNFILWVIAEIAIVACDIPEVIGTAFALNMLFN--VPVWIGVLLTGLS 168
>Medtr2g104990.1 | NRAMP metal ion transporter 6 | HC |
chr2:45255006-45250032 | 20130731
Length = 545
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AE CR EY + +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T L
Sbjct: 111 LAEHCRAEYSRVSNFILWVIAEIAIVACDIPEVIGTAFALNMLFN--VPVWIGVLLTGLS 168
>Medtr2g104990.2 | NRAMP metal ion transporter 6 | HC |
chr2:45254820-45250012 | 20130731
Length = 570
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AE CR EY + +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T L
Sbjct: 136 LAEHCRAEYSRVSNFILWVIAEIAIVACDIPEVIGTAFALNMLFN--VPVWIGVLLTGLS 193