Miyakogusa Predicted Gene

Lj4g3v0772180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0772180.1 Non Characterized Hit- tr|K4BP40|K4BP40_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.84,0.00000000000002,seg,NULL; coiled-coil,NULL,CUFF.48041.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968...   168   2e-42
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2...    47   4e-06
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2...    46   1e-05

>Medtr4g095080.1 | frigida-like protein | HC |
           chr4:39679199-39682625 | 20130731
          Length = 545

 Score =  168 bits (425), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/135 (65%), Positives = 100/135 (74%)

Query: 1   MGDVEQGKENNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHXXX 60
           MGDVEQ  ENN ESMIEQLAQAFLELEA+KGASEDK+QW EIKQHF DLE AL KK+   
Sbjct: 1   MGDVEQSNENNKESMIEQLAQAFLELEAQKGASEDKVQWDEIKQHFSDLEMALNKKNEEL 60

Query: 61  XXXXXXXXQKQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEAHANNHTGTME 120
                   +KQ EMNTLL +RK  V  KEQDLLD LQELKD AVA+I EA  N+ T T +
Sbjct: 61  QAKEREYEEKQLEMNTLLTQRKAAVTSKEQDLLDRLQELKDTAVAAIIEARPNDETTTFD 120

Query: 121 SVYEGESKDNKLLLS 135
            VY+GE KDN++ +S
Sbjct: 121 FVYDGEDKDNQVSIS 135


>Medtr8g010170.1 | ABI3-interacting protein | HC |
           chr8:2595983-2590280 | 20130731
          Length = 545

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 1/102 (0%)

Query: 10  NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHXXXXXXXXXXXQ 69
           ++  S I+QL +AF ELE+ +  + + ++W E+++HF  LE +L ++             
Sbjct: 12  DSTSSKIQQLQKAFAELESYRAVTLN-LKWKELEEHFQGLEKSLKRRFNELEDQEKEFEN 70

Query: 70  KQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEAH 111
           K  +   +L +++  V  KEQ LL  LQ  +DA+V +I +A 
Sbjct: 71  KTRKAREMLEKQEAAVFAKEQALLQRLQRKRDASVFTIVDAR 112


>Medtr8g010160.1 | ABI3-interacting protein | HC |
           chr8:2588108-2583935 | 20130731
          Length = 547

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 10  NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHXXXXXXXXXXXQ 69
           ++  S I QL +AF ELE+ +  + + ++W E+++HF  LE +L ++             
Sbjct: 12  DSTSSKIRQLQKAFAELESYRAVTLN-MKWKELEEHFHGLEKSLKRRFHELEDHEKVFEN 70

Query: 70  KQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEA 110
           K  +   +L +++E V  KEQ  L  LQE +DAA  +I  A
Sbjct: 71  KTMKAREMLKKQEEAVFAKEQATLQRLQEKRDAATFAILNA 111