Miyakogusa Predicted Gene

Lj4g3v0771070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0771070.1 Non Characterized Hit- tr|I1L6M7|I1L6M7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55824
PE,87.84,0,THFDHDRGNASE,Tetrahydrofolate dehydrogenase/cyclohydrolase;
no description,NULL; no
description,NAD(,NODE_41327_length_900_cov_51.931110.path3.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |...   266   6e-72
Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |...   266   6e-72
Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |...   265   1e-71
Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC...   193   6e-50
Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |...   189   6e-49
Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |...   174   3e-44

>Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 368

 Score =  266 bits (680), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 127/146 (86%), Positives = 135/146 (92%)

Query: 5   EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLN 64
           EVSRM+EA GV+PGLAVILVGDRKDSATYVRNK+KACE  GINSLE  LPEDSTEEEVLN
Sbjct: 96  EVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGINSLEVNLPEDSTEEEVLN 155

Query: 65  YISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPLLV 124
           +I+GYN+DPSVHGILV LPLPSHMNEQN+LNA+ IEKDVDGFHPLNIG LAMR REPL V
Sbjct: 156 HIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFHPLNIGRLAMRGREPLFV 215

Query: 125 PCTPKGCIELLRRYGVSIKGKRAVVI 150
           PCTPKGCIELL RYGVSIKGKRAVVI
Sbjct: 216 PCTPKGCIELLHRYGVSIKGKRAVVI 241


>Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 351

 Score =  266 bits (680), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 127/146 (86%), Positives = 135/146 (92%)

Query: 5   EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLN 64
           EVSRM+EA GV+PGLAVILVGDRKDSATYVRNK+KACE  GINSLE  LPEDSTEEEVLN
Sbjct: 79  EVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGINSLEVNLPEDSTEEEVLN 138

Query: 65  YISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPLLV 124
           +I+GYN+DPSVHGILV LPLPSHMNEQN+LNA+ IEKDVDGFHPLNIG LAMR REPL V
Sbjct: 139 HIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFHPLNIGRLAMRGREPLFV 198

Query: 125 PCTPKGCIELLRRYGVSIKGKRAVVI 150
           PCTPKGCIELL RYGVSIKGKRAVVI
Sbjct: 199 PCTPKGCIELLHRYGVSIKGKRAVVI 224


>Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896314 | 20130731
          Length = 347

 Score =  265 bits (677), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/146 (86%), Positives = 135/146 (92%)

Query: 5   EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLN 64
           EVSRM+EA GV+PGLAVILVGDRKDSATYVRNK+KACE  GINSLE  LPEDSTEEEVLN
Sbjct: 75  EVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGINSLEVNLPEDSTEEEVLN 134

Query: 65  YISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPLLV 124
           +I+GYN+DPSVHGILV LPLPSHMNEQN+LNA+ IEKDVDGFHPLNIG LAMR REPL V
Sbjct: 135 HIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFHPLNIGRLAMRGREPLFV 194

Query: 125 PCTPKGCIELLRRYGVSIKGKRAVVI 150
           PCTPKGCIELL RYGVSIKGKRAVVI
Sbjct: 195 PCTPKGCIELLHRYGVSIKGKRAVVI 220


>Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC |
           chr7:44234483-44237478 | 20130731
          Length = 293

 Score =  193 bits (490), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 113/148 (76%)

Query: 3   TAEVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEV 62
           T EV  + E  G VPGLAV++VG+R+DS +YVR K+KAC   GI + +  LPE  +E EV
Sbjct: 19  TDEVRLLSEKYGKVPGLAVVIVGNRQDSESYVRTKRKACADLGIKNFDIDLPEQISEAEV 78

Query: 63  LNYISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPL 122
           + ++   N DP+VHGILV LPLP H+NE+ +L  I++EKDVDGFHPLNIG LAM+ R+PL
Sbjct: 79  IKHVHQLNADPNVHGILVQLPLPKHINEEKVLTEISLEKDVDGFHPLNIGKLAMKGRDPL 138

Query: 123 LVPCTPKGCIELLRRYGVSIKGKRAVVI 150
            VPCTPK C+ELL R GVSIKGKRAVV+
Sbjct: 139 FVPCTPKACLELLSRSGVSIKGKRAVVV 166


>Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr1:10595287-10589370 | 20130731
          Length = 361

 Score =  189 bits (481), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 89/146 (60%), Positives = 113/146 (77%)

Query: 5   EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLN 64
           +V +MK+ +G VPGLAVILVG R+DS TYVRNK  ACE  G+ S+   LP D  + +V N
Sbjct: 89  QVRQMKKGLGKVPGLAVILVGQRRDSLTYVRNKIIACEEVGMKSVVTELPTDCADADVQN 148

Query: 65  YISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPLLV 124
            I  +N+DPS+HGILV LPLP H++E+ IL+A+ +EKDVDGFHP+N+G+LA+R REPL +
Sbjct: 149 AIMRFNKDPSIHGILVQLPLPQHLDEEKILDAVCLEKDVDGFHPVNMGNLALRGREPLFI 208

Query: 125 PCTPKGCIELLRRYGVSIKGKRAVVI 150
           PCT K CIELL R GV I GK+AVVI
Sbjct: 209 PCTTKACIELLIRSGVEIMGKKAVVI 234


>Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr3:1040089-1043268 | 20130731
          Length = 363

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 78/146 (53%), Positives = 106/146 (72%)

Query: 5   EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLN 64
           E+ RMK  IG  P LA +LVGDR+DS T++  K KACE  GI ++ + LPE+ TE E+L+
Sbjct: 92  EIRRMKSDIGKFPKLAFVLVGDRRDSHTFIHLKSKACEKVGIETVVSQLPENCTENELLD 151

Query: 65  YISGYNEDPSVHGILVPLPLPSHMNEQNILNAITIEKDVDGFHPLNIGHLAMRDREPLLV 124
            +SG N+D  VHGI+V LPLP H++E+ I+N ++ EKDVDGFHPLNIG+LA   R+P  +
Sbjct: 152 VVSGLNDDQDVHGIIVQLPLPQHLDEERIMNIVSPEKDVDGFHPLNIGNLARSGRKPFFI 211

Query: 125 PCTPKGCIELLRRYGVSIKGKRAVVI 150
           PC  + CIELL  +G+ I+GKR  +I
Sbjct: 212 PCASRSCIELLLNHGIEIRGKRVAII 237