Miyakogusa Predicted Gene

Lj4g3v0770770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0770770.1 Non Characterized Hit- tr|D7MV47|D7MV47_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.56,5e-18,seg,NULL,CUFF.48021.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g095440.2 | hypothetical protein | HC | chr4:39784896-3978...   229   1e-60
Medtr4g095440.1 | hypothetical protein | HC | chr4:39784413-3978...   229   1e-60
Medtr4g082510.3 | DUF863 family protein | HC | chr4:32142520-321...    52   3e-07
Medtr4g082510.1 | DUF863 family protein | HC | chr4:32142520-321...    52   3e-07
Medtr4g082510.2 | DUF863 family protein | HC | chr4:32143504-321...    52   3e-07
Medtr5g043430.1 | DUF863 family protein | HC | chr5:19092025-190...    52   4e-07
Medtr5g043430.2 | DUF863 family protein | HC | chr5:19092025-190...    52   4e-07

>Medtr4g095440.2 | hypothetical protein | HC |
           chr4:39784896-39782341 | 20130731
          Length = 202

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/204 (64%), Positives = 141/204 (69%), Gaps = 13/204 (6%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVS----YF 56
           MEK +RSCDKEYMRMAMLKHEETFK+QVYELHRLYRIQKILM+NMEARRG+EV     YF
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKQQVYELHRLYRIQKILMQNMEARRGVEVKEQEWYF 60

Query: 57  NNAISLTQNGN--HKGAQEKPQIKFDLEQPAEEHFAESEDGVXXXXXXXXXXXXXGPSSY 114
            NAISLTQN N  HKG QEK QIKFDLE+PAEEH AES+D               GPSSY
Sbjct: 61  KNAISLTQNANHHHKGGQEKTQIKFDLERPAEEHTAESDDEGLEIIDETEIELTLGPSSY 120

Query: 115 NRGRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRT---REESSG-IRN-SFHIE 169
           NR  KK+ETP                   NK  R+ THH     REE SG IRN SF IE
Sbjct: 121 NRS-KKIETPLTSESGHSLSSSSTGSSDINKTRRWRTHHSNGMKREEPSGIIRNSSFGIE 179

Query: 170 EQLRSQERLKQSPWLFQVLNLNMT 193
           EQLR QERLKQSPW FQV+NLNMT
Sbjct: 180 EQLR-QERLKQSPWFFQVMNLNMT 202


>Medtr4g095440.1 | hypothetical protein | HC |
           chr4:39784413-39782721 | 20130731
          Length = 202

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/204 (64%), Positives = 141/204 (69%), Gaps = 13/204 (6%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVS----YF 56
           MEK +RSCDKEYMRMAMLKHEETFK+QVYELHRLYRIQKILM+NMEARRG+EV     YF
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKQQVYELHRLYRIQKILMQNMEARRGVEVKEQEWYF 60

Query: 57  NNAISLTQNGN--HKGAQEKPQIKFDLEQPAEEHFAESEDGVXXXXXXXXXXXXXGPSSY 114
            NAISLTQN N  HKG QEK QIKFDLE+PAEEH AES+D               GPSSY
Sbjct: 61  KNAISLTQNANHHHKGGQEKTQIKFDLERPAEEHTAESDDEGLEIIDETEIELTLGPSSY 120

Query: 115 NRGRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRT---REESSG-IRN-SFHIE 169
           NR  KK+ETP                   NK  R+ THH     REE SG IRN SF IE
Sbjct: 121 NRS-KKIETPLTSESGHSLSSSSTGSSDINKTRRWRTHHSNGMKREEPSGIIRNSSFGIE 179

Query: 170 EQLRSQERLKQSPWLFQVLNLNMT 193
           EQLR QERLKQSPW FQV+NLNMT
Sbjct: 180 EQLR-QERLKQSPWFFQVMNLNMT 202


>Medtr4g082510.3 | DUF863 family protein | HC |
          chr4:32142520-32149531 | 20130731
          Length = 1037

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILM 42
          DK++++  ML+HE  FK QV+ELHRLYRIQ+ LM
Sbjct: 57 DKDFVKQMMLEHEAIFKNQVFELHRLYRIQRDLM 90


>Medtr4g082510.1 | DUF863 family protein | HC |
          chr4:32142520-32149531 | 20130731
          Length = 1037

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILM 42
          DK++++  ML+HE  FK QV+ELHRLYRIQ+ LM
Sbjct: 57 DKDFVKQMMLEHEAIFKNQVFELHRLYRIQRDLM 90


>Medtr4g082510.2 | DUF863 family protein | HC |
          chr4:32143504-32149531 | 20130731
          Length = 1037

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILM 42
          DK++++  ML+HE  FK QV+ELHRLYRIQ+ LM
Sbjct: 57 DKDFVKQMMLEHEAIFKNQVFELHRLYRIQRDLM 90


>Medtr5g043430.1 | DUF863 family protein | HC |
          chr5:19092025-19097457 | 20130731
          Length = 1043

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNM 45
          DK+ ++  ML+HE  FK QVYELHRLYRIQ+ LM + 
Sbjct: 58 DKDVVKRMMLEHEAIFKNQVYELHRLYRIQRDLMNDF 94


>Medtr5g043430.2 | DUF863 family protein | HC |
          chr5:19092025-19097457 | 20130731
          Length = 1043

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNM 45
          DK+ ++  ML+HE  FK QVYELHRLYRIQ+ LM + 
Sbjct: 58 DKDVVKRMMLEHEAIFKNQVYELHRLYRIQRDLMNDF 94