Miyakogusa Predicted Gene

Lj4g3v0758040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0758040.1 Non Characterized Hit- tr|I3T3Q6|I3T3Q6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,86.96,0.000000000000005,seg,NULL; coiled-coil,NULL,CUFF.47984.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097030.1 | hypothetical protein | HC | chr4:39971886-3996...   226   8e-60

>Medtr4g097030.1 | hypothetical protein | HC |
           chr4:39971886-39969045 | 20130731
          Length = 221

 Score =  226 bits (577), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 111/156 (71%), Positives = 135/156 (86%), Gaps = 3/156 (1%)

Query: 23  NAAWKAAIDSVAGTNSYASSFTNGSSATKHND-RHDNSEGNKPEKIQLKHYQLKAQKLLD 81
           +AAWKAAIDSVAGT+SY +SF NG SAT +ND +  +++   P+  ++KHYQLKA KLLD
Sbjct: 20  DAAWKAAIDSVAGTSSYVTSFMNGFSATNNNDTKKKHNDNQNPKSPKIKHYQLKALKLLD 79

Query: 82  DILEKTLEIVKEPVPVLNEDPKVNDECGGIRLFKHSQPGIILDHADEPEPPRKRPRILPG 141
           DILE T+EIVKEP+PVL+EDP V D+CG IRLF+HS+PGI+ DHADEP+PP KRP+++PG
Sbjct: 80  DILENTIEIVKEPIPVLDEDPNV-DDCG-IRLFRHSKPGIVFDHADEPQPPMKRPKLVPG 137

Query: 142 EDIDEKSKKFRRRIRSVAVDGEGLMAAANDAYKKSL 177
           EDIDEKSKKFRRRIRS+AVDG  L+AAANDAYKKSL
Sbjct: 138 EDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSL 173