Miyakogusa Predicted Gene

Lj4g3v0756960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0756960.1 Non Characterized Hit- tr|F6HSS7|F6HSS7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,67.04,0,no
description,Glycosyl hydrolase family 43, five-bladed beta-propellor
domain; Arabinanase/levansuc,CUFF.47976.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g015460.1 | glycosyl hydrolase family 43 protein | HC | ch...   335   2e-92
Medtr5g015460.2 | glycosyl hydrolase family 43 protein | HC | ch...   335   2e-92
Medtr5g015460.3 | glycosyl hydrolase family 43 protein | HC | ch...   332   2e-91
Medtr4g097110.2 | glycosyl hydrolase family 43 protein | HC | ch...   310   1e-84
Medtr4g097110.1 | glycosyl hydrolase family 43 protein | HC | ch...   310   1e-84

>Medtr5g015460.1 | glycosyl hydrolase family 43 protein | HC |
           chr5:5348835-5354586 | 20130731
          Length = 472

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/271 (63%), Positives = 204/271 (75%), Gaps = 5/271 (1%)

Query: 1   MRTLYRNPTASPWNPGSRYCSTWTVIWSFXXXXXXXXXYSSVHR--EHGEGGEVKLHASI 58
           +R   + PT+   + G R  ++  V+            YS VH    HG GGE +L  S 
Sbjct: 3   IRNKCKKPTSLRCDAGGRCSTSVFVLSLLGCLLLFQLLYSYVHHVDRHG-GGEPRLLVS- 60

Query: 59  HHHPQLHELQQVENEKFQIPPAKRKRSPQGGKHGPKRITPLVDEFLDEHSQVRHVFFPGK 118
            +HPQ  ELQ+VE E   +PP K KRSP+  K  PKR T L+DEFLDE+SQ+RHVFFPG+
Sbjct: 61  -NHPQFRELQEVEEESLHVPPPKGKRSPRAVKRRPKRTTTLIDEFLDENSQMRHVFFPGR 119

Query: 119 RSAIDPMKAMGNDSYYYYPGRIWLDTDGNPIQAHGGGIIYDEKSSMYYWYGEYKDGPTYH 178
           + AIDP+ A+ ND Y+YYPGR+WLDTDG+PIQAHGGGI+YD+ S  YYWYGEYKDG TYH
Sbjct: 120 KRAIDPILAVENDKYHYYPGRMWLDTDGHPIQAHGGGILYDKSSRTYYWYGEYKDGITYH 179

Query: 179 ARDKGAARVDIIGVSGYSSKELWTWKYEGILLAADPTNETHDLHKSNVLERPKVIYNEKT 238
           A  KGAARVDIIGV  YSSK+LWTWK+EGI+LAA+ T+ETHDLHKSNVLERPKVIYNEKT
Sbjct: 180 AHKKGAARVDIIGVGCYSSKDLWTWKHEGIVLAAEETDETHDLHKSNVLERPKVIYNEKT 239

Query: 239 RKYVMLMHVDNANYTKASVGIAVSDRPYGPF 269
            KYVM MH+D+ANYTKASVG+A+SD P GPF
Sbjct: 240 EKYVMWMHIDDANYTKASVGVAISDAPDGPF 270


>Medtr5g015460.2 | glycosyl hydrolase family 43 protein | HC |
           chr5:5349653-5354338 | 20130731
          Length = 472

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/271 (63%), Positives = 204/271 (75%), Gaps = 5/271 (1%)

Query: 1   MRTLYRNPTASPWNPGSRYCSTWTVIWSFXXXXXXXXXYSSVHR--EHGEGGEVKLHASI 58
           +R   + PT+   + G R  ++  V+            YS VH    HG GGE +L  S 
Sbjct: 3   IRNKCKKPTSLRCDAGGRCSTSVFVLSLLGCLLLFQLLYSYVHHVDRHG-GGEPRLLVS- 60

Query: 59  HHHPQLHELQQVENEKFQIPPAKRKRSPQGGKHGPKRITPLVDEFLDEHSQVRHVFFPGK 118
            +HPQ  ELQ+VE E   +PP K KRSP+  K  PKR T L+DEFLDE+SQ+RHVFFPG+
Sbjct: 61  -NHPQFRELQEVEEESLHVPPPKGKRSPRAVKRRPKRTTTLIDEFLDENSQMRHVFFPGR 119

Query: 119 RSAIDPMKAMGNDSYYYYPGRIWLDTDGNPIQAHGGGIIYDEKSSMYYWYGEYKDGPTYH 178
           + AIDP+ A+ ND Y+YYPGR+WLDTDG+PIQAHGGGI+YD+ S  YYWYGEYKDG TYH
Sbjct: 120 KRAIDPILAVENDKYHYYPGRMWLDTDGHPIQAHGGGILYDKSSRTYYWYGEYKDGITYH 179

Query: 179 ARDKGAARVDIIGVSGYSSKELWTWKYEGILLAADPTNETHDLHKSNVLERPKVIYNEKT 238
           A  KGAARVDIIGV  YSSK+LWTWK+EGI+LAA+ T+ETHDLHKSNVLERPKVIYNEKT
Sbjct: 180 AHKKGAARVDIIGVGCYSSKDLWTWKHEGIVLAAEETDETHDLHKSNVLERPKVIYNEKT 239

Query: 239 RKYVMLMHVDNANYTKASVGIAVSDRPYGPF 269
            KYVM MH+D+ANYTKASVG+A+SD P GPF
Sbjct: 240 EKYVMWMHIDDANYTKASVGVAISDAPDGPF 270


>Medtr5g015460.3 | glycosyl hydrolase family 43 protein | HC |
           chr5:5348911-5354586 | 20130731
          Length = 469

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/233 (70%), Positives = 191/233 (81%), Gaps = 5/233 (2%)

Query: 39  YSSVHR--EHGEGGEVKLHASIHHHPQLHELQQVENEKFQIPPAKRKRSPQGGKHGPKRI 96
           YS VH    HG GGE +L  S  +HPQ  ELQ+VE E   +PP K KRSP+  K  PKR 
Sbjct: 38  YSYVHHVDRHG-GGEPRLLVS--NHPQFRELQEVEEESLHVPPPKGKRSPRAVKRRPKRT 94

Query: 97  TPLVDEFLDEHSQVRHVFFPGKRSAIDPMKAMGNDSYYYYPGRIWLDTDGNPIQAHGGGI 156
           T L+DEFLDE+SQ+RHVFFPG++ AIDP+ A+ ND Y+YYPGR+WLDTDG+PIQAHGGGI
Sbjct: 95  TTLIDEFLDENSQMRHVFFPGRKRAIDPILAVENDKYHYYPGRMWLDTDGHPIQAHGGGI 154

Query: 157 IYDEKSSMYYWYGEYKDGPTYHARDKGAARVDIIGVSGYSSKELWTWKYEGILLAADPTN 216
           +YD+ S  YYWYGEYKDG TYHA  KGAARVDIIGV  YSSK+LWTWK+EGI+LAA+ T+
Sbjct: 155 LYDKSSRTYYWYGEYKDGITYHAHKKGAARVDIIGVGCYSSKDLWTWKHEGIVLAAEETD 214

Query: 217 ETHDLHKSNVLERPKVIYNEKTRKYVMLMHVDNANYTKASVGIAVSDRPYGPF 269
           ETHDLHKSNVLERPKVIYNEKT KYVM MH+D+ANYTKASVG+A+SD P GPF
Sbjct: 215 ETHDLHKSNVLERPKVIYNEKTEKYVMWMHIDDANYTKASVGVAISDAPDGPF 267


>Medtr4g097110.2 | glycosyl hydrolase family 43 protein | HC |
           chr4:40009583-40006901 | 20130731
          Length = 465

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 195/283 (68%), Gaps = 31/283 (10%)

Query: 1   MRTLYRNPT----ASPWNPGSRYCS-TWTVIWSFXXXXXXXXXYSSVHREHGEGGEVKLH 55
           M+ LY+ P      S W   SRYCS +  ++W+          +   +            
Sbjct: 3   MKNLYKKPITNLRCSSW---SRYCSISLVILWTLLILGCILLLHLYSNNNTS-------- 51

Query: 56  ASIHHHPQL----HELQQVENEKFQIPPAKRKRSPQGGKHGPKRITPLVDEFLDEHSQVR 111
            +I H P L    H+LQ VE E FQIPP  +KRSPQ      K ITPLVDEFLD+ S +R
Sbjct: 52  LNIIHPPPLPSHFHQLQHVEKENFQIPPPNKKRSPQS-----KSITPLVDEFLDQDSSLR 106

Query: 112 HVFFPGKRSAIDPMKAMG---NDSY-YYYPGRIWLDTDGNPIQAHGGGIIYDEKSSMYYW 167
           HVFFP K   IDPMK +G   NDSY YYYPG+IWLDTDGNPIQAHGG I+YDE SS YYW
Sbjct: 107 HVFFPHK--TIDPMKTIGKGKNDSYNYYYPGKIWLDTDGNPIQAHGGCILYDENSSTYYW 164

Query: 168 YGEYKDGPTYHARDKGAARVDIIGVSGYSSKELWTWKYEGILLAADPTNETHDLHKSNVL 227
           YGEYKDGPTY   +KG ARVDIIGV  YSSK+LWTWK EGI LAA+ T++THDLHKSNVL
Sbjct: 165 YGEYKDGPTYLHNNKGPARVDIIGVGCYSSKDLWTWKKEGIALAAEKTDKTHDLHKSNVL 224

Query: 228 ERPKVIYNEKTRKYVMLMHVDNANYTKASVGIAVSDRPYGPFE 270
           ERPKVIYNEKTRKYVM MH+DNANY KA+VGIA SD P GPF+
Sbjct: 225 ERPKVIYNEKTRKYVMWMHIDNANYAKATVGIAFSDTPTGPFK 267


>Medtr4g097110.1 | glycosyl hydrolase family 43 protein | HC |
           chr4:40009583-40006901 | 20130731
          Length = 465

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 195/283 (68%), Gaps = 31/283 (10%)

Query: 1   MRTLYRNPT----ASPWNPGSRYCS-TWTVIWSFXXXXXXXXXYSSVHREHGEGGEVKLH 55
           M+ LY+ P      S W   SRYCS +  ++W+          +   +            
Sbjct: 3   MKNLYKKPITNLRCSSW---SRYCSISLVILWTLLILGCILLLHLYSNNNTS-------- 51

Query: 56  ASIHHHPQL----HELQQVENEKFQIPPAKRKRSPQGGKHGPKRITPLVDEFLDEHSQVR 111
            +I H P L    H+LQ VE E FQIPP  +KRSPQ      K ITPLVDEFLD+ S +R
Sbjct: 52  LNIIHPPPLPSHFHQLQHVEKENFQIPPPNKKRSPQS-----KSITPLVDEFLDQDSSLR 106

Query: 112 HVFFPGKRSAIDPMKAMG---NDSY-YYYPGRIWLDTDGNPIQAHGGGIIYDEKSSMYYW 167
           HVFFP K   IDPMK +G   NDSY YYYPG+IWLDTDGNPIQAHGG I+YDE SS YYW
Sbjct: 107 HVFFPHK--TIDPMKTIGKGKNDSYNYYYPGKIWLDTDGNPIQAHGGCILYDENSSTYYW 164

Query: 168 YGEYKDGPTYHARDKGAARVDIIGVSGYSSKELWTWKYEGILLAADPTNETHDLHKSNVL 227
           YGEYKDGPTY   +KG ARVDIIGV  YSSK+LWTWK EGI LAA+ T++THDLHKSNVL
Sbjct: 165 YGEYKDGPTYLHNNKGPARVDIIGVGCYSSKDLWTWKKEGIALAAEKTDKTHDLHKSNVL 224

Query: 228 ERPKVIYNEKTRKYVMLMHVDNANYTKASVGIAVSDRPYGPFE 270
           ERPKVIYNEKTRKYVM MH+DNANY KA+VGIA SD P GPF+
Sbjct: 225 ERPKVIYNEKTRKYVMWMHIDNANYAKATVGIAFSDTPTGPFK 267