Miyakogusa Predicted Gene

Lj4g3v0744870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0744870.2 CUFF.47972.2
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097220.1 | DUF4228 domain protein | HC | chr4:40063713-40...   177   2e-45
Medtr4g097220.2 | DUF4228 domain protein | HC | chr4:40063713-40...   165   1e-41
Medtr3g078300.1 | DUF4228 domain protein | HC | chr3:35276942-35...   102   1e-22
Medtr8g063200.1 | DUF4228 domain protein | HC | chr8:26461240-26...   100   5e-22
Medtr3g078300.2 | DUF4228 domain protein | HC | chr3:35276942-35...   100   6e-22
Medtr5g035430.1 | DUF4228 domain protein | HC | chr5:15407370-15...    94   3e-20
Medtr4g106790.1 | DUF4228 domain protein | HC | chr4:44080648-44...    94   5e-20
Medtr4g106790.2 | DUF4228 domain protein | HC | chr4:44080648-44...    92   1e-19

>Medtr4g097220.1 | DUF4228 domain protein | HC |
           chr4:40063713-40060326 | 20130731
          Length = 168

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 105/141 (74%), Gaps = 3/141 (2%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPLN 60
           MGNCQAAE ATVVI  PGNK+ERIYWS+SA++VMN NPGHYVALV+ S    + NG PL 
Sbjct: 1   MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSSPTLKSENGMPL- 59

Query: 61  SKHLKLLRPEDTLLIGQVYRLISFEDVLKEFAXXXXXXXXXXXXERGTHGVHLKHKDSRA 120
            KHLKLLRP+DTLLIGQVYRLISFEDVLKEFA            E G  G+ +KH+D RA
Sbjct: 60  -KHLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCGKLGKLLKESGNRGIQMKHRDFRA 118

Query: 121 TSSDTPIKVEQDIQRMGNNGS 141
             + +P+KVE++ QR  +NGS
Sbjct: 119 -PNPSPVKVERETQRTESNGS 138


>Medtr4g097220.2 | DUF4228 domain protein | HC |
           chr4:40063713-40062352 | 20130731
          Length = 139

 Score =  165 bits (418), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/129 (64%), Positives = 96/129 (74%), Gaps = 3/129 (2%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPLN 60
           MGNCQAAE ATVVI  PGNK+ERIYWS+SA++VMN NPGHYVALV+ S    + NG PL 
Sbjct: 1   MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSSPTLKSENGMPL- 59

Query: 61  SKHLKLLRPEDTLLIGQVYRLISFEDVLKEFAXXXXXXXXXXXXERGTHGVHLKHKDSRA 120
            KHLKLLRP+DTLLIGQVYRLISFEDVLKEFA            E G  G+ +KH+D RA
Sbjct: 60  -KHLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCGKLGKLLKESGNRGIQMKHRDFRA 118

Query: 121 TSSDTPIKV 129
            +  +P+KV
Sbjct: 119 PNP-SPVKV 126


>Medtr3g078300.1 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 13/102 (12%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSS----------E 50
           MGNCQA +AAT+VIQHP  K E+ Y SLSA+QVM +NPGH VAL++ ++           
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 51  NNNNNGTPLNSKHL---KLLRPEDTLLIGQVYRLISFEDVLK 89
            NNN  T  N   L   KLL+P DTL++G VYRLI+ ++V+K
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMK 102


>Medtr8g063200.1 | DUF4228 domain protein | HC |
          chr8:26461240-26460444 | 20130731
          Length = 173

 Score =  100 bits (249), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 6/95 (6%)

Query: 1  MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVL-----MSSENNNNN 55
          MGNCQ  +AA +VIQHP  KIER+YWS+SA+ VM  NPG+YV+L++        EN+NN 
Sbjct: 1  MGNCQTIDAAALVIQHPSGKIERLYWSVSASYVMRANPGYYVSLIMPLPQEQEGENSNNE 60

Query: 56 -GTPLNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
             P+    +KLL+P+DTL +G  YRLI+ ++V K
Sbjct: 61 VKKPVLFTRVKLLKPDDTLTLGHAYRLITTQEVEK 95


>Medtr3g078300.2 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  100 bits (248), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 13/102 (12%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSS----------E 50
           MGNCQA +AAT+VIQHP  K E+ Y SLSA+QVM +NPGH VAL++ ++           
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 51  NNNNNGTPLNSKHL---KLLRPEDTLLIGQVYRLISFEDVLK 89
            NNN  T  N   L   KLL+P DTL++G VYRLI+ ++V+K
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMK 102


>Medtr5g035430.1 | DUF4228 domain protein | HC |
          chr5:15407370-15405451 | 20130731
          Length = 173

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 3/92 (3%)

Query: 1  MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPLN 60
          MGNCQA +AA +VIQHP  KI+R+YW ++A++VM  NPGHYV+L++              
Sbjct: 1  MGNCQAVDAAVLVIQHPCGKIDRLYWPVTASEVMKTNPGHYVSLIMPLPPQPQEQNQEQK 60

Query: 61 S---KHLKLLRPEDTLLIGQVYRLISFEDVLK 89
          +     +KLLRP +TL +G  YRLI+ ++V+K
Sbjct: 61 TVRFTRVKLLRPNETLNLGHAYRLITNQEVMK 92


>Medtr4g106790.1 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 187

 Score = 93.6 bits (231), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 16/105 (15%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSS-------ENNN 53
           MGNCQA + AT+VIQ P  K ER+YW ++A++VM  +P HYVAL++ ++       EN +
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 54  NNGT---------PLNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
           N  +          +    +KLL+P DTLL+GQVYRLIS ++V K
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTK 105


>Medtr4g106790.2 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 167

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 16/105 (15%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSS-------ENNN 53
           MGNCQA + AT+VIQ P  K ER+YW ++A++VM  +P HYVAL++ ++       EN +
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 54  NNGT---------PLNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
           N  +          +    +KLL+P DTLL+GQVYRLIS ++V K
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTK 105