Miyakogusa Predicted Gene

Lj4g3v0731780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0731780.1 Non Characterized Hit- tr|C6T253|C6T253_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,40.79,0.00000000000006,seg,NULL; VQ,VQ,CUFF.47962.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097350.1 | VQ motif protein | HC | chr4:40121292-40122380...   159   2e-39
Medtr4g097280.1 | VQ motif protein | HC | chr4:40092375-40093365...   152   2e-37
Medtr4g097360.1 | VQ motif protein | HC | chr4:40124928-40125519...   149   1e-36
Medtr5g015190.1 | VQ motif protein | HC | chr5:5228070-5227392 |...    76   2e-14

>Medtr4g097350.1 | VQ motif protein | HC | chr4:40121292-40122380 |
           20130731
          Length = 191

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 109/164 (66%), Gaps = 6/164 (3%)

Query: 25  GLKNAYPYQS-HSLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCA 83
            +KN YP++S +S LHSVRK+P K+W KK P+APM PTP+K+YKVDPINF+ELVQ LTCA
Sbjct: 27  SMKNEYPFESKYSCLHSVRKSPTKTWNKKAPIAPMAPTPIKVYKVDPINFKELVQSLTCA 86

Query: 84  PEFKPSHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLP-IPLPVCTNNWYQ 142
           P+F P    H   LQS  + TT  +  V S P++N S RD   ++ P +P+   T +WYQ
Sbjct: 87  PQFMPPQPHHNLDLQSTTDHTTAKNI-VPSLPMKNLSSRDNVEVSSPLVPVSTTTTSWYQ 145

Query: 143 GLQSEAFDVNSQETVADRAVIPAWLEMLLFSPTSFSNGCFFPPL 186
             Q+E F  N +E      + P+ LEM LFSPTSF N CF PP+
Sbjct: 146 YFQAEYFGKNYEE---KEVITPSLLEMNLFSPTSFGNWCFVPPI 186


>Medtr4g097280.1 | VQ motif protein | HC | chr4:40092375-40093365 |
           20130731
          Length = 191

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 112/168 (66%), Gaps = 4/168 (2%)

Query: 25  GLKNAYPYQS-HSLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCA 83
            +KN YP++S +S LHSVRK+P K+W KK P+APM PTP K+YKVDPINF+ELVQ LTCA
Sbjct: 26  SMKNEYPFESKYSWLHSVRKSPTKTWNKKAPIAPMAPTPAKVYKVDPINFKELVQSLTCA 85

Query: 84  PEFKPSHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQG 143
           P+F PS   H+  LQS  N T  +     S P++N + +D+  ++ P+     TN+WYQ 
Sbjct: 86  PQFIPSQPHHKLDLQSTTNHTIANDSVPPSLPMKNFTNKDSVEVSPPLEPVSTTNSWYQY 145

Query: 144 LQSEAFDVNSQETVADRAVIPAWLEMLLFSPTSFSNGCFFPP-LSPKI 190
            Q+E F  N+ +   +  + P+ LE+ L SPTSF N CF PP ++P++
Sbjct: 146 FQAEYFGKNNDQ--EEEVITPSLLELNLLSPTSFGNWCFVPPIITPRV 191


>Medtr4g097360.1 | VQ motif protein | HC | chr4:40124928-40125519 |
           20130731
          Length = 188

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 4/168 (2%)

Query: 25  GLKNAYPYQSH-SLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCA 83
            +K+  P Q+H S LHSVRK+P K+W KKLP+APM PTP K+YKVDPINF+ELVQ LTCA
Sbjct: 23  SIKHECPCQTHYSWLHSVRKSPVKTWNKKLPIAPMAPTPAKVYKVDPINFKELVQSLTCA 82

Query: 84  PEFKPSHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQG 143
           P+F PS   H+  LQS  N T  +     S P++N + +DT  ++ P+     TN+WYQ 
Sbjct: 83  PQFIPSQPHHKLDLQSTTNHTIANDSVPPSLPMKNFTNKDTVEVSPPLEPVSTTNSWYQY 142

Query: 144 LQSEAFDVNSQETVADRAVIPAWLEMLLFSPTSFSNGCFFPP-LSPKI 190
            Q+E F  N+ +   +  + P+ LE+ L SPTSF N CF PP ++P++
Sbjct: 143 FQAEYFGKNNDQ--EEEVITPSLLELNLLSPTSFGNWCFVPPIITPRV 188


>Medtr5g015190.1 | VQ motif protein | HC | chr5:5228070-5227392 |
           20130731
          Length = 116

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 4/81 (4%)

Query: 29  AYPYQSH--SLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCAPEF 86
           +YP +SH  SLLHSVRK  +K WKK   +AP P T V++Y+VD +NFRELVQQLT APEF
Sbjct: 8   SYP-KSHNNSLLHSVRKPQSKPWKK-ASMAPQPLTAVRVYEVDVMNFRELVQQLTGAPEF 65

Query: 87  KPSHQPHEQVLQSIENATTNS 107
           KP      QV+ +  N    S
Sbjct: 66  KPQQHQQNQVVSTSWNKGVQS 86