Miyakogusa Predicted Gene

Lj4g3v0720730.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0720730.2 tr|F0YQM0|F0YQM0_AURAN Selenoprotein (Fragment)
OS=Aureococcus anophagefferens GN=Hypo5 PE=4
SV=1,36.84,5e-19,AhpC-TSA_2,NULL,CUFF.47959.2
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097500.1 | thioredoxin-like protein | HC | chr4:40173229-...   381   e-106
Medtr7g100540.1 | thioredoxin-like protein AAED1 | HC | chr7:404...    90   2e-18

>Medtr4g097500.1 | thioredoxin-like protein | HC |
           chr4:40173229-40178424 | 20130731
          Length = 251

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 177/197 (89%), Positives = 190/197 (96%)

Query: 20  RASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVAVVALLRHFGCPCCWELAST 79
           RA NSEYSP++ ENLGDVSIFTAAG+ V+FKDLWDQ QG+AVVALLRHFGCPCCWELAST
Sbjct: 54  RALNSEYSPTVAENLGDVSIFTAAGESVLFKDLWDQEQGIAVVALLRHFGCPCCWELAST 113

Query: 80  LKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYADPDRKAYDTLDLYYGFGR 139
           LKESK+RFD+AGVKLIAVGVGAP+KAR+LAERLPFPMDCLYADPDRKAY+  DLYYGFGR
Sbjct: 114 LKESKSRFDAAGVKLIAVGVGAPNKARILAERLPFPMDCLYADPDRKAYNFFDLYYGFGR 173

Query: 140 TFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELVYARKDEGTG 199
           TFFNPAS+ VLSRFDAL+KAVKNYTIEATPDDRSGVLQQGGMFVFRGKEL+YARKDEGTG
Sbjct: 174 TFFNPASASVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGTG 233

Query: 200 DHAPLDDVFDVCCKVPV 216
           DHAPLDDVFDVCCKVPV
Sbjct: 234 DHAPLDDVFDVCCKVPV 250


>Medtr7g100540.1 | thioredoxin-like protein AAED1 | HC |
           chr7:40482104-40485013 | 20130731
          Length = 251

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%)

Query: 31  TENLGDVSIFTAAGQPVMFKDLWDQNQGVAVVALLRHFGCPCCWELASTLKESKARFDSA 90
           + +L  V +F   G  +   DLW   +  AVVA  RHFGC  C + A  L   K   D++
Sbjct: 71  SSSLELVKVFDLEGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADYLASKKDIMDAS 128

Query: 91  GVKLIAVGVGAPDKARMLAERLPFPMDCLYADPDRKAYDTLDLYYGFGRTFFNPASSKVL 150
           GV L+ +G G  D+A+  AE+  F  + +YADP + +Y+ L    G   TF   A  K++
Sbjct: 129 GVALVLIGPGNIDQAKAFAEQTKFKGE-IYADPAQSSYEALKFVSGVLTTFTPKAGLKII 187

Query: 151 SRFDALRKAVKNYTIEATPDDRSGVLQQGGMFVFR-GK-ELVYARKDEGTGDHAPLDDVF 208
             +    +     + E     R G  QQGG+ V   GK  + Y  KD+  GD   ++D+ 
Sbjct: 188 ELYMEGYRQDWKLSFEKDTVSRGG-WQQGGIIVAGPGKGNISYIHKDKEAGDDPEIEDIL 246

Query: 209 DVCC 212
             CC
Sbjct: 247 KACC 250