Miyakogusa Predicted Gene

Lj4g3v0685340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0685340.1 Non Characterized Hit- tr|I1JUZ3|I1JUZ3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,54.43,1e-18,
,CUFF.47931.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097720.1 | epidermal patterning factor-like protein | HC ...   201   2e-52
Medtr5g014840.1 | epidermal patterning factor-like protein | HC ...   169   9e-43
Medtr3g110550.1 | epidermal patterning factor-like protein, puta...   100   3e-22
Medtr3g087020.1 | epidermal patterning factor-like protein | HC ...    64   5e-11
Medtr2g099810.1 | epidermal patterning factor-like protein | HC ...    58   2e-09
Medtr4g114660.1 | epidermal patterning factor-like protein | HC ...    57   3e-09
Medtr8g090010.1 | transmembrane protein, putative | HC | chr8:37...    57   7e-09
Medtr8g017850.1 | epidermal patterning factor-like protein | HC ...    55   2e-08
Medtr4g037115.1 | epidermal patterning factor-like protein | LC ...    54   3e-08
Medtr2g039920.1 | hypothetical protein | LC | chr2:17500449-1750...    52   1e-07
Medtr4g010300.1 | epidermal patterning factor-like protein, puta...    50   6e-07

>Medtr4g097720.1 | epidermal patterning factor-like protein | HC |
           chr4:40341547-40342092 | 20130731
          Length = 121

 Score =  201 bits (511), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 112/132 (84%), Gaps = 11/132 (8%)

Query: 1   MRFHHHVIGCQRLGFVCISLFFLIFSSWIQQGLLVTEGRKTHNKQSGFDQKVSEDNKMLL 60
           M F HHVI        CISLFFL+ SSWI QGL VTEGRK H KQSGF Q VSE+ KM+L
Sbjct: 1   MGFDHHVI--------CISLFFLVISSWILQGL-VTEGRKIH-KQSGFQQTVSEE-KMIL 49

Query: 61  RAQIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYSSNYKPMS 120
           RAQIGSRPPKC+RRCRSCGHCEAIQVPTNPQVQN KINSSKFS IAY++G+Y+SNYKPMS
Sbjct: 50  RAQIGSRPPKCDRRCRSCGHCEAIQVPTNPQVQNVKINSSKFSSIAYSRGNYNSNYKPMS 109

Query: 121 WKCKCGNLIFNP 132
           WKCKCGNLIFNP
Sbjct: 110 WKCKCGNLIFNP 121


>Medtr5g014840.1 | epidermal patterning factor-like protein | HC |
           chr5:5042120-5040915 | 20130731
          Length = 131

 Score =  169 bits (427), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 99/130 (76%), Gaps = 3/130 (2%)

Query: 3   FHHHVIGCQRLGFVCISLFFLIFSSWIQQGLLVTEGRKTHNKQSGFDQKVSEDNKMLLRA 62
           +H HVI  QR  F+ ISL FLI SS  Q+GL VTEGRKT N Q+GF Q +  DNK+++R 
Sbjct: 5   YHQHVICGQRFSFITISLLFLIVSSLTQKGL-VTEGRKTLN-QNGFHQTLG-DNKVMVRK 61

Query: 63  QIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYSSNYKPMSWK 122
           QIGSRPPKC+ RCR CGHCEAIQVP NP+   GKIN S  S +AYA+   +SNYKPMSWK
Sbjct: 62  QIGSRPPKCDTRCRFCGHCEAIQVPENPRAMTGKINPSTLSTVAYARRQDNSNYKPMSWK 121

Query: 123 CKCGNLIFNP 132
           CKCG++IFNP
Sbjct: 122 CKCGDIIFNP 131


>Medtr3g110550.1 | epidermal patterning factor-like protein,
           putative | HC | chr3:51679203-51679793 | 20130731
          Length = 130

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 6/108 (5%)

Query: 28  WIQQGLLVTEGRKTHNKQSGFDQKVSEDNKMLL-RAQIGSRPPKCERRCRSCGHCEAIQV 86
           +    + + EGR   N        + E+  ML  + QIGSRPPKCERRCRSC HCEA+QV
Sbjct: 26  FASTSIFMAEGRPISNLNEVAKNGMEENGSMLAEKLQIGSRPPKCERRCRSCVHCEAVQV 85

Query: 87  PTNP-QVQNGKINSSKFSRIAY-AKGDYSSNYKPMSWKCKCGNLIFNP 132
           P  P +VQ   I+ S +   AY ++GD  SNYKP+SWKCKCG+  FNP
Sbjct: 86  PIVPSKVQ---IHRSHYDSAAYSSRGDGLSNYKPISWKCKCGDYFFNP 130


>Medtr3g087020.1 | epidermal patterning factor-like protein | HC |
           chr3:39454024-39454681 | 20130731
          Length = 121

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 61  RAQIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIA--YAKGDYS--SNY 116
           + ++GS PP C  +C  C  C A+QVP++  VQ G   S+  +     + +G+ +  SNY
Sbjct: 46  KNRLGSAPPTCHNKCNQCHPCMAVQVPSHEHVQPGHTASTSSTEGVNFFLQGNNNGYSNY 105

Query: 117 KPMSWKCKCGNLIFNP 132
           KP+SWKC CG   FNP
Sbjct: 106 KPLSWKCHCGGNFFNP 121


>Medtr2g099810.1 | epidermal patterning factor-like protein | HC |
           chr2:42823251-42824486 | 20130731
          Length = 128

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 12/70 (17%)

Query: 63  QIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYSSNYKPMSWK 122
           +IGS PP CE +C  C  CEAIQVP+          SSK + +    G   +NY+P SWK
Sbjct: 71  KIGSSPPSCEHKCYGCNPCEAIQVPST--------ESSKRNHL----GLQYANYEPESWK 118

Query: 123 CKCGNLIFNP 132
           CKCG   ++P
Sbjct: 119 CKCGPSFYSP 128


>Medtr4g114660.1 | epidermal patterning factor-like protein | HC |
           chr4:47180359-47180843 | 20130731
          Length = 114

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 17/116 (14%)

Query: 18  ISLFFLIFSSWIQQGLLVTEGRKTHNKQSGF-DQKVSEDNKMLLRAQIGSRPPKCERRCR 76
           ++L  +IF +     L  ++  K +++  G  +QK         ++ +GSRPP+C  +C 
Sbjct: 15  VTLILIIFLTLFASNLEGSQNLKKYHRSKGLINQK---------KSVLGSRPPRCVNKCL 65

Query: 77  SCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYSSNYKPMSWKCKCGNLIFNP 132
           +C  C A  V  +P  + G+I+ +K +       +    Y  MSWKCKCGN  F P
Sbjct: 66  NCRPCMATLV-ISPHHKVGQIHKAKIT------AEKDEGYYLMSWKCKCGNKFFQP 114


>Medtr8g090010.1 | transmembrane protein, putative | HC |
           chr8:37665928-37666504 | 20130731
          Length = 123

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 61  RAQIGSRPPKCERRCRSCGHCEAIQVPTNPQVQN--GKINSSK--FSRIAYAKGDYSSNY 116
           + ++GS PP C  +C  C  C A+QVP+ P+  +   K+ S K   S          SNY
Sbjct: 48  KNRLGSMPPSCHSKCNECHPCMAVQVPSLPRQDSVPSKVASMKKWLSPSLQLGNSRYSNY 107

Query: 117 KPMSWKCKCGNLIFNP 132
           KP+ WKC CG+  FNP
Sbjct: 108 KPLGWKCHCGDHFFNP 123


>Medtr8g017850.1 | epidermal patterning factor-like protein | HC |
           chr8:6025784-6026335 | 20130731
          Length = 129

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 17/88 (19%)

Query: 45  QSGFDQKVSEDNKMLLRAQIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSR 104
           + G  +K   +N   + ++IGS PP CE +C  C  CEA QVP               SR
Sbjct: 59  KEGMSKKREVENDREV-SKIGSSPPSCEHKCYDCFPCEATQVP---------------SR 102

Query: 105 IAYAKGDYSSNYKPMSWKCKCGNLIFNP 132
            ++  G   +NY+P SWKCKCG   ++P
Sbjct: 103 TSHL-GIMYANYEPESWKCKCGPSFYSP 129


>Medtr4g037115.1 | epidermal patterning factor-like protein | LC |
           chr4:13644209-13645235 | 20130731
          Length = 130

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 36/134 (26%)

Query: 15  FVCISLFFLIFSSWIQQGLLVTEGR-----------KTHNK--QSGFDQKVSEDNKMLLR 61
           F  +S+F +IF+S     +   + R           +  NK  Q    +K SE  K+L R
Sbjct: 16  FFLLSIFTVIFTSNTALPVTCLDTRCHVFFKYAIDNQYVNKIGQEMLSKKKSEKTKVLSR 75

Query: 62  AQI---GSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYSSNYKP 118
             +   GS PP C  RC +C  C+ + VPT+P                      S+ Y P
Sbjct: 76  RLLSITGSHPPNCINRCDNCTPCKRVIVPTHP--------------------PQSAGYYP 115

Query: 119 MSWKCKCGNLIFNP 132
            SWKCKCGN ++ P
Sbjct: 116 TSWKCKCGNKLYLP 129


>Medtr2g039920.1 | hypothetical protein | LC |
           chr2:17500449-17501562 | 20130731
          Length = 127

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 23/105 (21%)

Query: 35  VTEGRKTHNKQSGFD----QKVSEDNKMLLR---AQIGSRPPKCERRCRSCGHCEAIQVP 87
           V    +  + Q  FD    +KV  + +  LR   ++IGS PP+CE +C  C  C   Q P
Sbjct: 39  VDSTNRIQDVQRPFDSTQGEKVMMEYEEALRGVGSRIGSTPPRCEHKCGGCIPCNPTQKP 98

Query: 88  TNPQVQNGKINSSKFSRIAYAKGDYSSNYKPMSWKCKCGNLIFNP 132
           TN                 +  G   +NY+P  WKC CG   FNP
Sbjct: 99  TN----------------KHLIGVQYANYEPEGWKCMCGTSYFNP 127


>Medtr4g010300.1 | epidermal patterning factor-like protein,
           putative | HC | chr4:2329987-2331019 | 20130731
          Length = 111

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 14/79 (17%)

Query: 54  EDNKMLLRAQIGSRPPKCERRCRSCGHCEAIQVPTNPQVQNGKINSSKFSRIAYAKGDYS 113
           +D KM+    IGS+PP C  +C +C  C A  V          ++  + S    ++GD +
Sbjct: 47  QDRKMV----IGSKPPACLNKCMNCRPCIATLV----------VSQKRKSYKVLSRGDDN 92

Query: 114 SNYKPMSWKCKCGNLIFNP 132
             Y  ++WKC+CGN +F P
Sbjct: 93  DTYYLLAWKCRCGNKVFQP 111