Miyakogusa Predicted Gene

Lj4g3v0685320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0685320.1 CUFF.47932.1
         (777 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g097790.1 | transmembrane protein, putative | LC | chr4:40...   311   2e-84
Medtr1g105890.1 | transmembrane protein, putative | HC | chr1:47...    92   2e-18
Medtr5g005430.1 | transmembrane protein, putative | HC | chr5:44...    84   4e-16

>Medtr4g097790.1 | transmembrane protein, putative | LC |
           chr4:40364706-40368281 | 20130731
          Length = 783

 Score =  311 bits (796), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 262/498 (52%), Positives = 306/498 (61%), Gaps = 45/498 (9%)

Query: 309 AGEVKEEKSRQXXXXXXXXXXX-----XINQNGTDVKDHVEENHEQDSKEEKEESNGTEA 363
            GE+ EEKS+Q                  NQNG+D K+ V ENHEQDSK+  EE+NGTE 
Sbjct: 302 TGEITEEKSKQENEETSETNSKDKENEESNQNGSDAKEQVGENHEQDSKQGTEETNGTEG 361

Query: 364 -EKEEQGKIQEEASSEKQVQDGEGNNEQHREENYAGDNASSA-VDHKSQDIFNESYNKT- 420
            EKEE  KI+E+ SS+ QVQDGE NNE  REENY+GDNASSA VD+KSQ    ES NKT 
Sbjct: 362 GEKEEHDKIKEDTSSDNQVQDGEKNNEA-REENYSGDNASSAVVDNKSQ----ESSNKTE 416

Query: 421 EQVDKNEKNESEMESQKSGTETNEVTDSNATTNIQENGGE-NQAQTDNGSEKRSTSESGG 479
           EQ DK EKNE E+ESQK+  ET E TDS  T N Q N  E +QAQT+N + K S SES  
Sbjct: 417 EQFDKKEKNEFELESQKNSNETTESTDSTITQNSQGNESEKDQAQTENDTPKGSASESDE 476

Query: 480 Q-QHQEQNNPTSDGVETVDSSSQNGNETTSHTTDKQNETSEDANSKVEDSSTDTTTPKTE 538
           Q Q QEQNN T D V+T D+SSQNGN+    TT+KQNETSEDANSK EDSS   TTP  E
Sbjct: 477 QKQEQEQNNTTKDDVQTTDTSSQNGND----TTEKQNETSEDANSKKEDSSALNTTPNNE 532

Query: 539 DSNADAAGDDVDSTYKXXXXXXXX-XXXXXXYKETTNLVQNENPNGNSVQEGKQD----- 592
           DS +  AGD  DST                 YK+TT    NENP  NS QEG Q+     
Sbjct: 533 DSKSGVAGDQADSTTTTSSSETQDGNTNHGEYKDTT----NENPEKNSGQEGTQESGSSS 588

Query: 593 --------ASHEAQL-TASDTSSEQKKDESSNAETNTDSVQNDNVNSDGSNTNSEGSAND 643
                   AS++ QL T SDTSSEQKKDESS+AE+ ++S QNDN NS  SNT S+ SAND
Sbjct: 589 NTFDNKDAASNKVQLTTTSDTSSEQKKDESSSAESKSESSQNDNANSGQSNTTSDESAND 648

Query: 644 NKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDA----NENENSV 699
           NK                                           S+DA    N+NEN+ 
Sbjct: 649 NK-DSSQVTTSSENSAEGNSNTENNSDENQNDSKNNENTNDSGNTSNDANVNENQNENAA 707

Query: 700 QRKTSENDGEAAQNESVESEKAKDESAHSDEGSNSNTNDQGSSSDPSITEEVKESHIDLG 759
           Q KTSEN+G+ AQNESVES+K  +ESAH D  +NSN+NDQG SSD S+T++ KES +DLG
Sbjct: 708 QTKTSENEGD-AQNESVESKKENNESAHKDVDNNSNSNDQG-SSDTSVTQDDKESRVDLG 765

Query: 760 TLPESNAESNHRDVSSAE 777
           TLPESN ES+H DVSSAE
Sbjct: 766 TLPESNGESHHNDVSSAE 783



 Score =  191 bits (484), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/197 (51%), Positives = 120/197 (60%), Gaps = 43/197 (21%)

Query: 1   MFRLSPRRSQRSK-GFKVKHALQICVLLGVCIWLVYQIKHTNEKKASYGESAKTGNDVVR 59
           MFRLSPRRSQRSK GFKVKHALQICVL+GVC+WLVYQI H+ E+KASYG S KTGN+VV+
Sbjct: 1   MFRLSPRRSQRSKNGFKVKHALQICVLVGVCVWLVYQIGHSREQKASYGASTKTGNEVVK 60

Query: 60  LGRKDLNPLVEETTVVDARXXXXXXXXXXXXXXXXXINLDEVNSVDXXXXXXXXXXXXIK 119
           LGRKDL P VEET+V+DAR                          +             K
Sbjct: 61  LGRKDLKPRVEETSVIDARHKE---------------------DEEEADELDNKHDEQTK 99

Query: 120 LDDANGVDENEVENKPEEHIKLDDANGVDENSEHSQDLVEHEGEGSSENARTDIESEQHV 179
           LDD                      NGV++NSEH +D VE E E SS+NA+TD+E EQH 
Sbjct: 100 LDD---------------------VNGVEDNSEHKEDSVEQESEESSQNAKTDLEGEQHT 138

Query: 180 EKVGEESDNTESKENDS 196
           EKV EE+DN E+KEN+S
Sbjct: 139 EKVDEENDNAENKENES 155


>Medtr1g105890.1 | transmembrane protein, putative | HC |
          chr1:47816020-47814383 | 20130731
          Length = 545

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 7/74 (9%)

Query: 1  MFRLSPR-RSQRSKGFKVKHALQICVLLGVCIWLVYQIKHTNEKKASYGE-----SAKTG 54
          M + +P  R+QRSKGFKVKH LQ  +LLGVC WL+YQ+KH ++KK  + +       +T 
Sbjct: 1  MIKRNPSSRNQRSKGFKVKHVLQAILLLGVCFWLIYQVKHNHDKKKEFDKNDTKLPIRTE 60

Query: 55 ND-VVRLGRKDLNP 67
           D +++LGRKDL+P
Sbjct: 61 TDQILKLGRKDLHP 74


>Medtr5g005430.1 | transmembrane protein, putative | HC |
          chr5:444636-441597 | 20130731
          Length = 560

 Score = 84.3 bits (207), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 7/74 (9%)

Query: 1  MFRLSPRRSQRSKGFKVKHALQICVLLGVCIWLVYQIKHTNEKKASYGES-------AKT 53
          M + S  R+ RSKG KVKH LQI +L+G+C+WL+YQ+K +++KK  + ES       A+ 
Sbjct: 1  MIKRSSSRNNRSKGVKVKHVLQIMLLVGICLWLIYQVKRSHDKKKEFDESDKKVSVGAQN 60

Query: 54 GNDVVRLGRKDLNP 67
             +  LGRKDL P
Sbjct: 61 AYRITELGRKDLLP 74