Miyakogusa Predicted Gene

Lj4g3v0684270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684270.1 Non Characterized Hit- tr|B4G0B8|B4G0B8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,78.85,4e-16,seg,NULL,NODE_36032_length_743_cov_86.158813.path1.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467540.2 | CAAX amino terminal protease family protein | ...   314   4e-86
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...   314   4e-86
Medtr8g467540.3 | CAAX amino terminal protease family protein | ...   313   1e-85

>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 182/239 (76%), Gaps = 11/239 (4%)

Query: 11  LFDFQKLSSYTTFSKQTRTFLFSSRHTNFRFPLTSKRSLPPLCFFNSQD-KSNPKIPDKE 69
           LF   KLSS      Q+  FL      N+R  L SKR LP +CFFNS+D KS+ K+ D++
Sbjct: 25  LFHSHKLSSL----NQSSAFL----SHNYR--LNSKRILPSVCFFNSRDNKSDTKLQDQD 74

Query: 70  PGLEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLVEATALPYLGIKPDVLSLDEKSEI 129
              EWPILRRWEVPWEWQTVSLTSLACGLGFVLTGL EATALPYLGI+PD+LSLDEK+E+
Sbjct: 75  SRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIRPDMLSLDEKAEL 134

Query: 130 LFLDQGITTAVVLGIIYTVANTFQPLPEDFFKYDLREPFNLQKXXXXXXXXXXXXXXXXX 189
           LF+DQGITTA VLGIIY+V NT+QPLPE FFKYDLREPFNLQK                 
Sbjct: 135 LFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVGLVGALVSI 194

Query: 190 XXXXXXVSFFNGETPERETDALVRLLPLIGSSNLSTACLVGIVGVLAPLLEETVFRGFF 248
                 VSFFNGETPERETDALVRLLPLIGSS++STACLVGI GV APLLEETVFRGFF
Sbjct: 195 GLTGVAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFF 253


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 182/239 (76%), Gaps = 11/239 (4%)

Query: 11  LFDFQKLSSYTTFSKQTRTFLFSSRHTNFRFPLTSKRSLPPLCFFNSQD-KSNPKIPDKE 69
           LF   KLSS      Q+  FL      N+R  L SKR LP +CFFNS+D KS+ K+ D++
Sbjct: 25  LFHSHKLSSL----NQSSAFL----SHNYR--LNSKRILPSVCFFNSRDNKSDTKLQDQD 74

Query: 70  PGLEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLVEATALPYLGIKPDVLSLDEKSEI 129
              EWPILRRWEVPWEWQTVSLTSLACGLGFVLTGL EATALPYLGI+PD+LSLDEK+E+
Sbjct: 75  SRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIRPDMLSLDEKAEL 134

Query: 130 LFLDQGITTAVVLGIIYTVANTFQPLPEDFFKYDLREPFNLQKXXXXXXXXXXXXXXXXX 189
           LF+DQGITTA VLGIIY+V NT+QPLPE FFKYDLREPFNLQK                 
Sbjct: 135 LFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVGLVGALVSI 194

Query: 190 XXXXXXVSFFNGETPERETDALVRLLPLIGSSNLSTACLVGIVGVLAPLLEETVFRGFF 248
                 VSFFNGETPERETDALVRLLPLIGSS++STACLVGI GV APLLEETVFRGFF
Sbjct: 195 GLTGVAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFF 253


>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 182/239 (76%), Gaps = 11/239 (4%)

Query: 11  LFDFQKLSSYTTFSKQTRTFLFSSRHTNFRFPLTSKRSLPPLCFFNSQD-KSNPKIPDKE 69
           LF   KLSS      Q+  FL      N+R  L SKR LP +CFFNS+D KS+ K+ D++
Sbjct: 25  LFHSHKLSSL----NQSSAFL----SHNYR--LNSKRILPSVCFFNSRDNKSDTKLQDQD 74

Query: 70  PGLEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLVEATALPYLGIKPDVLSLDEKSEI 129
              EWPILRRWEVPWEWQTVSLTSLACGLGFVLTGL EATALPYLGI+PD+LSLDEK+E+
Sbjct: 75  SRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIRPDMLSLDEKAEL 134

Query: 130 LFLDQGITTAVVLGIIYTVANTFQPLPEDFFKYDLREPFNLQKXXXXXXXXXXXXXXXXX 189
           LF+DQGITTA VLGIIY+V NT+QPLPE FFKYDLREPFNLQK                 
Sbjct: 135 LFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVGLVGALVSI 194

Query: 190 XXXXXXVSFFNGETPERETDALVRLLPLIGSSNLSTACLVGIVGVLAPLLEETVFRGFF 248
                 VSFFNGETPERETDALVRLLPLIGSS++STACLVGI GV APLLEETVFRGFF
Sbjct: 195 GLTGVAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFF 253