Miyakogusa Predicted Gene

Lj4g3v0684200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684200.1 CUFF.47914.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-320258...   117   3e-27
Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-320274...   117   4e-27

>Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-32025884
           | 20130731
          Length = 254

 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 38  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPILR 97
           CGFCLFMKGGGCKD+FI+WE+CV+EAE  NEDLVEKCA+VTA+LKQCMD H+DYYEPILR
Sbjct: 47  CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106



 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 9/97 (9%)

Query: 1   MSTPPQQPVEDKPDHPSPXXXXXXXXXXXXXXXXXXXCGFCLFMKGGGCKDSFIDWENCV 60
           +STP +Q  +++P   +P                   CGFCLF+KG  C+D+ ++WENCV
Sbjct: 151 ISTPSKQAEKEQPAPEAPKAENKEEEGD---------CGFCLFIKGDSCRDTLVEWENCV 201

Query: 61  QEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPILR 97
           +EA++  EDL EKC+ VT RL QCMD+++DY +PI++
Sbjct: 202 KEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPIIK 238


>Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-32027413
           | 20130731
          Length = 357

 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 38  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPILR 97
           CGFCLFMKGGGCKD+FI+WE+CV+EAE  NEDLVEKCA+VTA+LKQCMD H+DYYEPILR
Sbjct: 47  CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106



 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 52/57 (91%)

Query: 40  FCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPIL 96
           FC+FMKGGGC+D+F+DWENC+ EAEKN ED+VEKC+QVT  LKQCMD+H+DYY PIL
Sbjct: 275 FCVFMKGGGCRDTFVDWENCMDEAEKNKEDVVEKCSQVTDLLKQCMDSHSDYYGPIL 331



 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 9/97 (9%)

Query: 1   MSTPPQQPVEDKPDHPSPXXXXXXXXXXXXXXXXXXXCGFCLFMKGGGCKDSFIDWENCV 60
           +STP +Q  +++P   +P                   CGFCLF+KG  C+D+ ++WENCV
Sbjct: 151 ISTPSKQAEKEQPAPEAPKAENKEEEGD---------CGFCLFIKGDSCRDTLVEWENCV 201

Query: 61  QEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPILR 97
           +EA++  EDL EKC+ VT RL QCMD+++DY +PI++
Sbjct: 202 KEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPIIK 238