Miyakogusa Predicted Gene

Lj4g3v0684090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684090.1 Non Characterized Hit- tr|A9P8G1|A9P8G1_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,26.78,3e-18,seg,NULL,CUFF.47908.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082350.1 | transmembrane protein, putative | HC | chr4:32...   607   e-174
Medtr4g109020.1 | transmembrane protein, putative | HC | chr4:45...   108   6e-24
Medtr3g037110.1 | transmembrane protein, putative | HC | chr3:13...    94   2e-19
Medtr7g021620.1 | transmembrane protein, putative | HC | chr7:68...    80   2e-15
Medtr4g096890.1 | transmembrane protein, putative | HC | chr4:38...    80   3e-15
Medtr3g088975.1 | transmembrane protein, putative | HC | chr3:40...    75   1e-13
Medtr1g029440.1 | transmembrane protein, putative | HC | chr1:10...    70   4e-12

>Medtr4g082350.1 | transmembrane protein, putative | HC |
           chr4:32077565-32075769 | 20130731
          Length = 358

 Score =  607 bits (1565), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 297/358 (82%), Positives = 323/358 (90%), Gaps = 2/358 (0%)

Query: 1   MEISGAGCSPRFRSEHLRKDGSEEIPVREHSDLGV--HNYEIQSMNALDILRETIRILRF 58
           MEIS  GCSPR R +HL+KDGS+E  +R+  +L +  HN+EIQSMNALDILRETIRILRF
Sbjct: 1   MEISSGGCSPRIRVDHLKKDGSDETRLRQALELELSDHNHEIQSMNALDILRETIRILRF 60

Query: 59  NSWAFMAITVLLICPVSAVLLSNVTVDESIVKNLTIRLMLVARTSGLPLRSIIKQSCQRF 118
           NSWAFM I  LLICPVSAVLLSNV VDESIVKNLTIRLMLVA TSGLPLR +IKQSCQRF
Sbjct: 61  NSWAFMIIAFLLICPVSAVLLSNVLVDESIVKNLTIRLMLVAETSGLPLRPMIKQSCQRF 120

Query: 119 AEMVISSASCFPLYATLLLLSKAAVVYSVDCTYSRKKFDVSKFCVIIAKFWRKILSTYMW 178
           A+ VI+SA CFPLYATLLLLSK AVVYSVDCTYSRKKFD SKFCVI+AKFWRKIL+TYMW
Sbjct: 121 ADTVIASAMCFPLYATLLLLSKTAVVYSVDCTYSRKKFDGSKFCVIVAKFWRKILATYMW 180

Query: 179 ACTIVIGCITLFCVFLVAFCSALSVLGFSPDXXXXXXXXXXXXFSVVFANAIIICNIAMV 238
           ACT+++GCIT+FCVFLVAFCSAL+VLGFSP+            FSVVFANAIIIC++A+V
Sbjct: 181 ACTVIVGCITMFCVFLVAFCSALAVLGFSPNVVVYAALMVGLVFSVVFANAIIICSVALV 240

Query: 239 ITVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGTAFVEGLFEHRVKTLSYGDGSSR 298
           I+VLEDVSGAQAMLRSSILIKGQTQVGLLI+LGSTIG AFVEGLFEHRVKTLSYGDGSSR
Sbjct: 241 ISVLEDVSGAQAMLRSSILIKGQTQVGLLIYLGSTIGMAFVEGLFEHRVKTLSYGDGSSR 300

Query: 299 MWEGPLLVIMHSFVVLIDSMMSAVFYFSCRSFSMENSEGEGNSILETMAISAETMGIQ 356
           MWEGPLLVIM+SFVVLIDSMMSAVFYFSCRSFSMENS G+GNSILETMAISAETMGIQ
Sbjct: 301 MWEGPLLVIMYSFVVLIDSMMSAVFYFSCRSFSMENSNGDGNSILETMAISAETMGIQ 358


>Medtr4g109020.1 | transmembrane protein, putative | HC |
           chr4:45200284-45202032 | 20130731
          Length = 324

 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 152/292 (52%), Gaps = 12/292 (4%)

Query: 47  DILRETIRILRFNSWAFMAITVLLICPVSAVLL---SNVTVDESIVKNLTIRLMLVARTS 103
            ILR +I     N   F +    L+ P SA +L   + V    S++  +  RL  +   +
Sbjct: 6   KILRRSIHSFLQNYHYFTSSIAFLVFPFSASILISQAFVPSPSSLLPQIYNRLRTLFDAA 65

Query: 104 GLPLRSIIKQSCQ-RFAEMVISSASCFPLYATLLLLSKAAVVYSVDCTYSRKKFDVSKFC 162
           G P  S++      + ++ +  S    P   T+LL++KA++++++   +++     S F 
Sbjct: 66  GFPSYSLLFNILNLKVSQTITCSIFSLPFTLTVLLIAKASIIHALKLNHNKPSLPPS-FS 124

Query: 163 VIIAKFWRKILSTYMWACTIVIGC-ITLFCVFLVAFCSALSVLGFS-PDXXXXXXXXXXX 220
            IIA  ++ +  TY+  C ++I    T FC+  +AF S +  LG+S P            
Sbjct: 125 SIIA-LYKPLFHTYICNCFLIISANATSFCIMFLAF-SFVETLGYSSPSFLLFMSATGAI 182

Query: 221 XFSVVFANAIIICNIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGTAFVE 280
            FSV+ ANA++ICN+++V++ +E   G  A+L++ ILI+G+T + L + L   I  A +E
Sbjct: 183 LFSVILANALVICNMSLVLSGMEGHGGYSAILKACILIRGKTSMALFLALPVNIALAAIE 242

Query: 281 GLFEHRVKTLSYGDGSSR---MWEGPLLVIMHSFVVLIDSMMSAVFYFSCRS 329
            LF  R+    +  G +R   + EG  +  ++S  +++D+++S +FY S ++
Sbjct: 243 ALFHFRIVREYHIVGKARPIVLLEGIFIAYLYSIFIILDTIVSCLFYKSFKT 294


>Medtr3g037110.1 | transmembrane protein, putative | HC |
           chr3:13581344-13579651 | 20130731
          Length = 324

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 16/290 (5%)

Query: 47  DILRETIRILRFNSWAFMAITVLLICPVSA-VLLSN--VTVDESIVKNLTIRLMLVARTS 103
            ILR +I     N   F     +L  P SA +LLS   V    S+   +   L  +   +
Sbjct: 6   KILRRSIHSFLQNYQYFTITISILAFPFSASILLSQALVPFSSSLFPQIYNHLKTLFDAA 65

Query: 104 GLPLRSIIKQSCQ-RFAEMVISSASCFPLYATLLLLSKAAVVYSVDCTYSRKKFDVSKFC 162
           G P  S +      + ++ + SS    P   T  L++KA ++ +++   +++ F  S + 
Sbjct: 66  GFPSSSQLFTVLNLKVSQTITSSIFTLPFTLTFFLIAKAFIIQALNK--NKENFQPSSYN 123

Query: 163 VIIAKFWRKILSTYMWACTIVIGC-ITLFCVFLVAFCSALSVLGFSPDXXXXXXXXXXXX 221
                 ++ IL TY++    ++    T FC   +AF     +   S              
Sbjct: 124 ------YKPILHTYIYNTLFILSANATTFCFLFLAFSFTEGLGNSSSSFTVFLSAAAAVL 177

Query: 222 FSVVFANAIIICNIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGTAFVEG 281
           FSV+ ANA++ICN+A+ ++ +E   G   +L++ ++++G+T + L + L   +G A +E 
Sbjct: 178 FSVILANALVICNMALTLSGVEGHGGYMTILKACVVLRGRTSMALFLALPVNVGLAAIEA 237

Query: 282 LFEHRVKTLSYGDGSSRMW---EGPLLVIMHSFVVLIDSMMSAVFYFSCR 328
           LF+ RV    Y D  S  +   EG  +  ++S  ++ID+++S +FY SC+
Sbjct: 238 LFQFRVVRGYYIDEKSWFFIALEGIFIAYLYSIFIIIDTIVSYMFYKSCK 287


>Medtr7g021620.1 | transmembrane protein, putative | HC |
           chr7:6883195-6886674 | 20130731
          Length = 320

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 39/311 (12%)

Query: 39  EIQSMNALDILRETIRILRFNSWAFMAITVLLICPVSAVLLSNVTVDESIVKNLTIRLML 98
           E+Q +N  +IL+E+I I + +   F  IT+ LI P+S  +L++      ++  L      
Sbjct: 7   ELQFLNIPNILKESISIPKISPKTFYLITLTLIFPLSFAILAHSLFTHPLISQLQSPFTD 66

Query: 99  VARTS-GLPLRSIIKQSCQRFAEMVISSASCFPLYATLLLLSKAAVVYSVDCTYSRKKFD 157
            ++TS    L  II    Q F  + + + S         LLS AAVV++V   Y+ K   
Sbjct: 67  PSQTSHDWTLLLII----QFFYLIFLFAFS---------LLSTAAVVFTVASLYTSKPVS 113

Query: 158 VSKFCVIIAKFWRKILSTYMWACTIVIGCITLFCVFLVAFCSALSVLGFSPDXXXXXXXX 217
            S     I K ++++  T++W  T+++ C      FL   C  L V+    D        
Sbjct: 114 FSNTISAIPKVFKRLFITFLWV-TLLMICYN----FLFVLCLVLMVVAIDTD------NS 162

Query: 218 XXXXFSVVFANAIIIC---------NIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLLI 268
               FSVVF   + +          ++A V++VLE + G  AM +S  L+KG+ +   L+
Sbjct: 163 VLLFFSVVFIFVLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAALL 222

Query: 269 FLGSTIGTAFVEGLFEHRVKTLSYGDGS---SRMWEGPLLVIMHSFVVLIDSMMSAVFYF 325
             G  +  A + G+F   V  +  GDG    SR+  G  LV +   V L+  ++ +VFY+
Sbjct: 223 VCGYLLICAVISGMFS--VVVVHGGDGYGVFSRIVIGGFLVGVLVIVNLVGLLVQSVFYY 280

Query: 326 SCRSFSMENSE 336
            C+S+  +  +
Sbjct: 281 VCKSYHHQGID 291


>Medtr4g096890.1 | transmembrane protein, putative | HC |
           chr4:38580522-38581484 | 20130731
          Length = 320

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 27/305 (8%)

Query: 39  EIQSMNALDILRETIRILRFNSWAFMAITVLLICPVSAVLLSNVTVDESIVKNLTIRLML 98
           E+Q +N  +IL+E+I I + +   F  IT++LI P+S  +L++      ++ ++      
Sbjct: 7   ELQFLNIPNILKESISIPKISPKTFYLITLILIFPLSFAILAHSLFTHPLISHIESPFTD 66

Query: 99  VARTS-GLPLRSIIKQSCQRFAEMVISSASCFPLYATLLLLSKAAVVYSVDCTYSRKKFD 157
            A+TS    L  II    Q F  + + + S         LLS AAVV++V   Y+ K   
Sbjct: 67  PAQTSHDWTLLLII----QFFYLIFLFAFS---------LLSTAAVVFTVASLYTSKPVS 113

Query: 158 VSKFCVIIAKFWRKILSTYMWACTIVIGCITLFCVFLVAFCSALSVLGFSPDXXXXXXXX 217
            S     I   ++++  T++W  T+++ C      F+   C  L V+    D        
Sbjct: 114 FSNTISAIPNVFKRLFITFLWV-TLLMFCYN----FVFILCLVLMVIAVDTDNSVLLFFS 168

Query: 218 XXXXFSVVFANAIIIC---NIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTI 274
               F +     + I    ++A V++VLE + G  AM +S  L+KG+ +   L+  G   
Sbjct: 169 VVLIFVLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYASLLVCGYLF 228

Query: 275 GTAFVEGLFEHRVKTLSYGDGS---SRMWEGPLLVIMHSFVVLIDSMMSAVFYFSCRSFS 331
             A + G+F   V  +  GDG    SR++ G  LV +   V L+  ++ +VFY+ C+S+ 
Sbjct: 229 LCAVISGMFS--VIVVHGGDGYDVFSRIFIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYH 286

Query: 332 MENSE 336
            +  +
Sbjct: 287 HQEID 291


>Medtr3g088975.1 | transmembrane protein, putative | HC |
           chr3:40729182-40727803 | 20130731
          Length = 332

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 24/307 (7%)

Query: 39  EIQSMNALDILRETIRILRFNSW--AFMAITVLLICPVSAVLLSNVTVDESIVKNLTIRL 96
           E+Q +    I +E+ +I+   SW   F  IT+ LI P+S + L ++ +   + + +    
Sbjct: 7   EMQFLGLFGIYKESYKIII--SWRKIFSQITLTLILPLSFIFLIHIQISNILFRKIMNNT 64

Query: 97  MLVARTS-GLPLRSIIKQSCQRFAEMVISSASCFPLY-----ATLL---LLSKAAVVYSV 147
             +  T  G P         Q+ ++++ S  + F L+      +LL   LLS +AVVY++
Sbjct: 65  NEILETQQGTP-------QYQKLSDIITSEWTTFLLFKLVYFTSLLIFSLLSTSAVVYTI 117

Query: 148 DCTYSRKKFDVSKFCVIIAKFWRKILSTYMWACTIVIGCITLFCVFLVAFCSALSVLGFS 207
              Y+ ++    +   ++ K W++++ T++  CT     +      LV    ALS+   S
Sbjct: 118 ASIYTAREVTFKRVFGVVPKVWKRLMVTFL--CTFFAFFVYNTLAILVFIIWALSINYKS 175

Query: 208 PDXXXXXXXXXXXXFSVVFANAIIICNIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLL 267
                           +++    II  +A V+TVLED  G +AM++S+ LIKG+  +  L
Sbjct: 176 GGVAILVIIGILYFVGILYLT--IIWQLASVVTVLEDSYGFKAMMKSNNLIKGKIGLSTL 233

Query: 268 IFLGSTIGTAFVEGLFEHRVKTLSYGDGSSRMWEGPLLVIMHSFVVLIDSMMSAVFYFSC 327
           IFL   +    ++ LF   V          R   G L  ++ S + L   ++  V YF C
Sbjct: 234 IFLKLNVSFFGIQFLFTKLVVKAWGLTLVDRTAYGILCFVLLSHLFLFGLVIQTVLYFVC 293

Query: 328 RSFSMEN 334
           +S+  ++
Sbjct: 294 KSYHHQS 300


>Medtr1g029440.1 | transmembrane protein, putative | HC |
           chr1:10107059-10108491 | 20130731
          Length = 333

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 134/306 (43%), Gaps = 21/306 (6%)

Query: 39  EIQSMNALDILRETIRILRFNSW--AFMAITVLLICPVSAVLLSNVTVDESIVKNLTIRL 96
           ++Q +      +E+ +I+   SW   F  IT+ L+ P+S + L ++ V   I K +    
Sbjct: 7   DMQFLGFFGCYKESFKIIF--SWRKIFTQITLTLLLPLSFIFLFHIEVSNLIFKKIQHTE 64

Query: 97  MLVARTS-GLP----LRSIIKQSCQRFAEMVISSASCFPLYATLLLLSKAAVVYSVDCTY 151
             +  T  G P    L  II     +F  +++     F       LLS +A+VY+    +
Sbjct: 65  EQIDHTQQGTPKYEKLTDII---SSQFITLLLFKLVYFTFLLIFSLLSTSAIVYTTASIF 121

Query: 152 SRKKFDVSKFCVIIAKFWRKILSTYM--WACTIVIGCITLFCVFLVAFCSALSVLGFSPD 209
           + K     K   I+ K W++++ T++  +A       IT F + L+A   ++   G    
Sbjct: 122 TSKDVSFKKVMKIVPKVWKRLMITFLCAYAAFFAYNFITFFVIILLAITISIKSGG---- 177

Query: 210 XXXXXXXXXXXXFSVVFANAIIICNIAMVITVLEDVSGAQAMLRSSILIKGQTQVGLLIF 269
                       + + F    +I  +A V+TVLED  G +AM++S  LIKG+  + + IF
Sbjct: 178 --IVLLIFIMIFYFIGFVYLTLIWQLASVVTVLEDFYGIKAMVKSKELIKGKMGLSIFIF 235

Query: 270 LGSTIGTAFVEGLFEHRVKTLSYGDGS-SRMWEGPLLVIMHSFVVLIDSMMSAVFYFSCR 328
           L   +    +  +F+  V    +  G   R   G L  +  S + L   ++  V Y  C+
Sbjct: 236 LVLNVSFVLIRLVFKVVVVNGRWCFGYVDRTGYGILCFLFLSCLFLFGLVLQTVLYLVCK 295

Query: 329 SFSMEN 334
           S+  EN
Sbjct: 296 SYHHEN 301