Miyakogusa Predicted Gene
- Lj4g3v0683960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0683960.1 Non Characterized Hit- tr|G7I2U4|G7I2U4_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,36.21,7e-19,DUF4283,Domain of unknown function DUF4283;
zf-CCHC_4,Zinc knuckle CX2CX4HX4C,CUFF.47947.1
(173 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g033215.1 | DUF4283 domain protein | LC | chr6:10509812-10... 88 5e-18
Medtr0010s0370.1 | DUF4283 domain protein | LC | scaffold0010:24... 77 9e-15
Medtr0010s0350.1 | DUF4283 domain protein | LC | scaffold0010:24... 77 9e-15
Medtr7g106180.1 | DUF4283 domain protein | LC | chr7:43138905-43... 52 3e-07
Medtr1g036720.1 | DUF4283 domain protein | HC | chr1:13492151-13... 52 3e-07
Medtr3g024240.1 | DUF4283 domain protein | LC | chr3:7472867-747... 47 7e-06
>Medtr6g033215.1 | DUF4283 domain protein | LC |
chr6:10509812-10510702 | 20130731
Length = 296
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 1 MVGKVFTHNSFNMKAFKNTIGLIWKVRKGVKIRDIDKNLFTFRFFDPADKDMVLKASPWN 60
+VG+V + ++ + +G IW + + ++ N F + + AD +L SPW
Sbjct: 129 LVGRVVVNKPVHLATLEARLGPIWDPMYQMSLIPMEDNKFMVQLYSKADLARILDRSPWL 188
Query: 61 FDKYLIISKDMDVEANPREINMNTALFWVFAYEVLMGSRTTQVAKFFGNLIGNFIEWNEA 120
D +II K + V NP ++MNT W +++ G +V G+ IG I+++
Sbjct: 189 LDNNMIILKKVVVGENPLTMSMNTTEIWAQIHKLPFGFMGDKVGALVGSHIGKMIKFD-- 246
Query: 121 EERKLG---RFIRLRAEVNLSKPLKRGTIIAKMGRERLRVFFKYEKLG 165
EE G RF+R+R E+ + PL++ II + E +R+ F+YEKLG
Sbjct: 247 EENNYGPWWRFMRVRVEIAVEAPLQQEFIIEREEGENIRLVFRYEKLG 294
>Medtr0010s0370.1 | DUF4283 domain protein | LC |
scaffold0010:249562-248996 | 20130731
Length = 188
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 1 MVGKVFTHNSFNMKAFKNTIGLIWKVRKGVKIRDIDKNLFTFRFFDPADKDMVLKASPWN 60
+VG+ T+ I W + ++I +I+ L++F+F D +LK PW
Sbjct: 34 LVGRFLTNRPIRSYMMMEKIKTFWNPVREMRIEEIEPGLYSFQFTHHLDMQRILKKGPWY 93
Query: 61 FDKYLIISKDMDVEANPREINMNTALFWVFAYEVLMGSRTTQVAKFFGNLIGNFIEWNEA 120
FD +L++ + NP ++ + FW+ +++ G + +V K N IG F+E++
Sbjct: 94 FDNHLLMLNVVPANGNPNQVALQFVPFWIQVHDLPTGFMSEKVGKDIANHIGEFLEYDAK 153
Query: 121 EERK-LGRFIRLRAEVNLSKPLKR 143
L ++R+R ++++KPLKR
Sbjct: 154 NNSNFLHTYMRIRVLLDVTKPLKR 177
>Medtr0010s0350.1 | DUF4283 domain protein | LC |
scaffold0010:243991-243425 | 20130731
Length = 188
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 1 MVGKVFTHNSFNMKAFKNTIGLIWKVRKGVKIRDIDKNLFTFRFFDPADKDMVLKASPWN 60
+VG+ T+ I W + ++I +I+ L++F+F D +LK PW
Sbjct: 34 LVGRFLTNRPIRSYMMMEKIKTFWNPVREMRIEEIEPGLYSFQFTHHLDMQRILKKGPWY 93
Query: 61 FDKYLIISKDMDVEANPREINMNTALFWVFAYEVLMGSRTTQVAKFFGNLIGNFIEWNEA 120
FD +L++ + NP ++ + FW+ +++ G + +V K N IG F+E++
Sbjct: 94 FDNHLLMLNVVPANGNPNQVALQFVPFWIQVHDLPTGFMSEKVGKDIANHIGEFLEYDAK 153
Query: 121 EERK-LGRFIRLRAEVNLSKPLKR 143
L ++R+R ++++KPLKR
Sbjct: 154 NNSNFLHTYMRIRVLLDVTKPLKR 177
>Medtr7g106180.1 | DUF4283 domain protein | LC |
chr7:43138905-43137885 | 20130731
Length = 234
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 62/141 (43%)
Query: 1 MVGKVFTHNSFNMKAFKNTIGLIWKVRKGVKIRDIDKNLFTFRFFDPADKDMVLKASPWN 60
++GK+ + + +++ IW G KI +++ NL+ F F D + +LK PW
Sbjct: 26 IIGKLLASKQISKQILHSSLMGIWCNPTGFKITELENNLYQFSFEKEVDINRILKGEPWI 85
Query: 61 FDKYLIISKDMDVEANPREINMNTALFWVFAYEVLMGSRTTQVAKFFGNLIGNFIEWNEA 120
+ + N +E++ A W+ + + + +T + G IG E
Sbjct: 86 IRNVWLKLYLWNRNTNIQELDFTHAPLWIQVWGLPLHCKTIAMGHQIGAQIGKLEEAAIY 145
Query: 121 EERKLGRFIRLRAEVNLSKPL 141
E + I+++ + N+S P+
Sbjct: 146 EYPNNAKIIKVKVQYNISNPI 166
>Medtr1g036720.1 | DUF4283 domain protein | HC |
chr1:13492151-13491816 | 20130731
Length = 111
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 1 MVGKVFTHNSFNMKAFKNTIGLIWKVRKGVKIRDIDKNLFTFRFFDPADKDMVLKASPWN 60
+VG+ T+ I W + VKI +I+ NL+TF+FF D VLK PW
Sbjct: 34 LVGRFLTNRPIQTYMMMEKIETFWNPIRDVKIEEIEPNLYTFQFFHHLDLQRVLKKGPWY 93
Query: 61 FDKYLII 67
FD +L+I
Sbjct: 94 FDNHLLI 100
>Medtr3g024240.1 | DUF4283 domain protein | LC |
chr3:7472867-7473465 | 20130731
Length = 187
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 48 ADKDMVLKASPWNFDKYLIISKDMDVEANPREINMNTALFWVFAYEVLMGSRTTQVAKFF 107
D + L+ PW FD + ++ K +D+ ++ N A + ++ V
Sbjct: 54 CDVERTLRNKPWTFDGFPLVLKKLDIREVVSDVLFNEAKVLLQIFKFPNSYMNEYVGMLI 113
Query: 108 GNLIGNFIEWNEAEERKLGR-FIRLRAEVNLSKPLKRGTIIAKMGRE--RLRVFFKYEKL 164
IG+F+++ E+ R ++ +R +N++ PLK T + ++ L V FKYEKL
Sbjct: 114 DCQIGSFVKYGESNYYGPWRAYMLIRVSLNINGPLKISTTFRRKEKDDATLNVSFKYEKL 173
Query: 165 GDV 167
G+V
Sbjct: 174 GNV 176