Miyakogusa Predicted Gene

Lj4g3v0669760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0669760.1 tr|G7JHI5|G7JHI5_MEDTR Erlin-2 OS=Medicago
truncatula GN=MTR_4g083100 PE=4 SV=1,85.21,0,prohibitin
homologues,Band 7 protein; Band_7,Band 7 protein; Band 7/SPFH
domain,NULL; SUBFAMILY NOT ,CUFF.47885.1
         (361 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g083100.1 | SPFH domain/band 7 family protein | HC | chr4:...   610   e-175

>Medtr4g083100.1 | SPFH domain/band 7 family protein | HC |
           chr4:32338860-32342079 | 20130731
          Length = 361

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/365 (82%), Positives = 319/365 (87%), Gaps = 8/365 (2%)

Query: 1   MESQQQPIRATPHP---PPQARDSTXXXXXXXXXXXXXXXXXVPSAPTSFKSTLSILHQV 57
           MESQQ P R  P     PP    S+                 VPSA  SFK+T++I+HQV
Sbjct: 1   MESQQPPTRRAPQAAADPP----SSSILVPFLSFIAIAVFVLVPSASPSFKNTMAIVHQV 56

Query: 58  PEGHVGVYWRGGALLKTITEPGFHLKIPFLTQYEPVQVTLQTDQVTDIPCGTKGGVMINF 117
           PEGHVGVYWRGGALLKTITEPGFH+K+PFLTQ+EPVQVTLQTD+VTDIPCGTKGGVMI F
Sbjct: 57  PEGHVGVYWRGGALLKTITEPGFHMKMPFLTQFEPVQVTLQTDEVTDIPCGTKGGVMIVF 116

Query: 118 EKIEVVNRLHKDFVYETLLNYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDE 177
            KIEVVNRLHK+ VYETLLNYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDE
Sbjct: 117 GKIEVVNRLHKESVYETLLNYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDE 176

Query: 178 KMKDALQGDCTRYAPGIEIIGVRVTKPTIPSSIRRNFEQMEEERTKVLIAIEKQRVSEKE 237
           KMKDALQ DCTRYAPGIEIIGVRVTKP IP SIR NFEQMEEERTKVLIAIEKQ+VSEKE
Sbjct: 177 KMKDALQVDCTRYAPGIEIIGVRVTKPNIPESIRHNFEQMEEERTKVLIAIEKQKVSEKE 236

Query: 238 AETMKKMAISEAEKNANVSKILMEQKLLEKDSSRRQEEIENAMYLAREKSLADADFYRVI 297
           AETMKKMAISEAEKNANVSKILMEQKL EKDS+RRQEEIENAMYLAREKSLADADFYRVI
Sbjct: 237 AETMKKMAISEAEKNANVSKILMEQKLSEKDSARRQEEIENAMYLAREKSLADADFYRVI 296

Query: 298 KEAEANRLKLTPEFLQLKFIESVTNNTKIFFGEKIPGMILDQRLLGN-LLQEASRGAATK 356
           KEAEANRLKLTPEFL+LKFIES+ NNTKIFFG+KIP MILDQRLLGN L++E  RGAATK
Sbjct: 297 KEAEANRLKLTPEFLELKFIESIANNTKIFFGDKIPNMILDQRLLGNFLVEEVPRGAATK 356

Query: 357 AKADI 361
            KADI
Sbjct: 357 TKADI 361