Miyakogusa Predicted Gene

Lj4g3v0669470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0669470.1 Non Characterized Hit- tr|I1L2L0|I1L2L0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,28.89,0.0000000000003,seg,NULL; DBD_Tnp_Mut,Transposase, MuDR,
plant,CUFF.47862.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0177s0050.1 | hypothetical protein | LC | scaffold0177:2429...   122   2e-28

>Medtr0177s0050.1 | hypothetical protein | LC |
           scaffold0177:24299-22979 | 20130731
          Length = 413

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 13/181 (7%)

Query: 26  EDEYSSDQLXXXXXXXXXXXXXPKPKNCVFRGEDMCKEFKFKVGREFISLKQFKDAVLYH 85
           E+ Y S++L              + K   FR ED+ K FKF V           D VL H
Sbjct: 201 ENYYVSEELGSASDSGGDGCVEVRSKYPKFRSEDLTKTFKFIV-----------DVVLEH 249

Query: 86  SVLNGRKVTFPKNDKIRVKVECTR--NCSFKMFWSKVGGKETFKTKTICPKHTCGRVYNN 143
           +VLNG++V F KND +RV+V C     C++  F S+V G  TF+ KT+  KHTCGRV+ N
Sbjct: 250 NVLNGKQVKFRKNDAVRVRVICKSFDICNYTEFVSRVAGTHTFRVKTLSQKHTCGRVFYN 309

Query: 144 KNETSAWIAKVVAWKFQSHGDIKVSEVMTNLQQENSVGVTHWRAWKGGVIAREIVEGEAA 203
           KN  S W+AKV+    +S   +++++V+T ++ + S G+T   A+K   IAR++VEG++ 
Sbjct: 310 KNAKSDWLAKVIFEGMKSSKRLQINDVVTEVRTKYSTGITFSTAFKARQIARKLVEGDSV 369

Query: 204 K 204
           K
Sbjct: 370 K 370